Camelus dromedarius isolate Drom800 breed African chromosome 28, CamDro3, whole genome shotgun sequence.
type: Entry
definition: Camelus dromedarius isolate Drom800 breed African chromosome 28, CamDro3, whole genome shotgun sequence.
sequence version: NC_044538.1
sequence date: 2019-10-23
sequence: sequence
division: CON
label: NC_044538.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565028
dblink: SAMN03252735
keyword: WGS
keyword: RefSeq
source: Camelus dromedarius (Arabian camel)
organism: Camelus dromedarius
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Camelus.
reference: 1
references: 30972949
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016654.2.\nAssembly name: CamDro3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vetmeduni Vienna on\n2019/10/07. The original whole-genome shotgun project has the\naccession JWIN00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vetmeduni Vienna\nAssembly Date :: FEB-2019\nAssembly Method :: ABySS v. 1.3.6; HiRise v. MAY-2017;\n PBJelly v. 15.8.24; Pilon v. 1.22; ABySS\n Sealer v. 2.0.2; HiRise v. MAY-2018;\n PBJelly v. 15.8.24; BBMAP-CallVariants v.\n 38.12; ABySS Sealer v. 2.1.0\nAssembly Name :: CamDro3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: Illumina HiSeq; Dovetail Hi-C and\n Chicago; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus dromedarius Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 16041598
topology: linear
so has quality: SO_0000987
location: 1..16041598
location: region:1-16041598:1
RO_0002162: 9838

NC_044538
type: RefSeq
SIO_000068: refseq

PRJNA565028
type: BioProject
SIO_000068: bioproject

SAMN03252735
type: BioSample
SIO_000068: biosample

1
title: Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary
author: Elbers, J.P.
author: Rogers, M.F.
author: Perelman, P.L.
author: Proskuryakova, A.A.
author: Serdyukova, N.A.
author: Johnson, W.E.
author: Horin, P.
author: Corander, J.
author: Murphy, D.
author: Burger, P.A.
journal: Mol Ecol Resour
volume: 19
issue: 4
pages: 1015-1026
year: 2019
pubmed: 30972949

30972949
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16041598:1
position: 16041598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16041598:1:source
so part of: sequence
organism: Camelus dromedarius
mol type: genomic DNA
isolate: Drom800
isolation source: isolated from an animal called Varis
chromosome: 28
sex: female
tissue type: blood
dev stage: adult
country: Austria: Eithental
collection date: 13-Jan-2013
collected by: Pamela Burger
breed: African

9838
type: Taxonomy
SIO_000068: taxonomy

LOC116149506
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149506
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(38205..39236)
location: region:38205-39236:-1
so has part: feature:38205-39236:-1:exon
subclass of: SO_0000011

116149506
type: Gene
SIO_000068: ncbigene

position:38205:-1
position: 38205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39236:-1
position: 39236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38205-39236:-1:exon

LOC116149506
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149506
product: uncharacterized LOC116149506
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_004133092.1
SIO_010081: LOC116149506
subclass of: SO_0000673
so part of: LOC116149506
location: complement(join(38205..38638,39001..39095,39213..39236))
location: region:38205-39236:-1
so has part: feature:39213-39236:-1:exon
so has part: feature:39001-39095:-1:exon
so has part: feature:38205-38638:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39213-39236:-1:exon

position:39213:-1
position: 39213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:39001-39095:-1:exon

position:39001:-1
position: 39001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:39095:-1
position: 39095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:38205-38638:-1:exon

position:38638:-1
position: 38638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116149490
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149490
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 99037..130559
location: region:99037-130559:1
so has part: feature:99037-130559:1:exon

116149490
type: Gene
SIO_000068: ncbigene

position:99037:1
position: 99037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:130559:1
position: 130559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99037-130559:1:exon

LOC116149490
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149490
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149490
subclass of: SO_0000673
so part of: LOC116149490
location: 99037..99126
location: region:99037-99126:1
so has part: feature:99037-99126:1:exon

position:99126:1
position: 99126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:99037-99126:1:exon

LOC116149490
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149490
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149490
subclass of: SO_0000673
so part of: LOC116149490
location: 129446..130559
location: region:129446-130559:1
so has part: feature:129446-130559:1:exon

position:129446:1
position: 129446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129446-130559:1:exon

LOC105099081
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105099081
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 139448..152812
location: region:139448-152812:1
so has part: feature:139448-152812:1:exon
subclass of: SO_0000011

105099081
type: Gene
SIO_000068: ncbigene

position:139448:1
position: 139448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:152812:1
position: 152812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:139448-152812:1:exon

LOC105099081
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105099081
product: uncharacterized LOC105099081
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XR_004133090.1
SIO_010081: LOC105099081
subclass of: SO_0000673
so part of: LOC105099081
location: join(139448..139590,141208..141376,147268..147412,151934..152812)
location: region:139448-152812:1
so has part: feature:139448-139590:1:exon
so has part: feature:141208-141376:1:exon
so has part: feature:147268-147412:1:exon
so has part: feature:151934-152812:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:139448-139590:1:exon

position:139590:1
position: 139590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:141208-141376:1:exon

position:141208:1
position: 141208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:141376:1
position: 141376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:147268-147412:1:exon

position:147268:1
position: 147268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147412:1
position: 147412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:151934-152812:1:exon

position:151934:1
position: 151934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149507
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149507
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(157118..159801)
location: region:157118-159801:-1
so has part: feature:157118-159801:-1:exon
subclass of: SO_0000011

116149507
type: Gene
SIO_000068: ncbigene

position:157118:-1
position: 157118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:159801:-1
position: 159801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157118-159801:-1:exon

LOC116149507
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149507
product: uncharacterized LOC116149507
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004133093.1
SIO_010081: LOC116149507
subclass of: SO_0000673
so part of: LOC116149507
location: complement(join(157118..157489,159347..159801))
location: region:157118-159801:-1
so has part: feature:159347-159801:-1:exon
so has part: feature:157118-157489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:159347-159801:-1:exon

position:159347:-1
position: 159347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:157118-157489:-1:exon

position:157489:-1
position: 157489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SOWAHC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SOWAHC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(173214..177692)
location: region:173214-177692:-1
so has part: feature:173214-177692:-1:exon
subclass of: SO_0000010

105099082
type: Gene
SIO_000068: ncbigene

position:173214:-1
position: 173214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177692:-1
position: 177692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:173214-177692:-1:exon

SOWAHC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SOWAHC
product: sosondowah ankyrin repeat domain family member C
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440993.1
SIO_010081: SOWAHC
subclass of: SO_0000673
so part of: SOWAHC
location: complement(173214..177692)
location: region:173214-177692:-1
so has part: feature:173214-177692:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:173214-177692:-1:exon

SOWAHC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SOWAHC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: ankyrin repeat domain-containing protein SOWAHC
translation: MEGWRSASSRPGRLSWSGPSGAPWAGRRASVQAIMAPSGSLGTRPPTPQTPQTLRTAPRARPSGGGPSAAPRRKARGPKRREMRPRAAVWPPRRPGPGGREAPPSCGAARRRDGRGGEEEGAGALTLDPLEHAWMLSAADGRWDSLEGLLACEPGLLAKRDFITGFTCLHWAAKHGRQELLALLVRFAGQHRLPVNINARTSGGYTALHLAAMHGHVEVVKLXVGAYDADVDVRDYSGRKASQYLSPSTAEEIRTLVGALDEDDGESAAGSGGGRWRLSRVLPAHLISGRLSHALEDGGDHHHHHHHHHHHHLAEGSAAGKAKEPGRKASGSSSGRMKPRLNKIRFRTQIIHTTPSFRDPEQPLEEGEDEEEDRSLKGHSSSFKLRPKSNVFG
SIO_010081: SOWAHC
subclass of: SO_0000673
so part of: SOWAHC
location: complement(176028..177209)
location: region:176028-177209:-1
so has part: feature:176028-177209:-1:exon

XP_031296853.1
type: Protein
SIO_000068: ncbiprotein

position:176028:-1
position: 176028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177209:-1
position: 177209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176028-177209:-1:exon

SEPTIN10
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SEPTIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 177741..230913
location: region:177741-230913:1
so has part: feature:177741-230913:1:exon
subclass of: SO_0000010

105099083
type: Gene
SIO_000068: ncbigene

position:177741:1
position: 177741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230913:1
position: 230913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177741-230913:1:exon

SEPTIN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPTIN10
product: septin 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031440992.1
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177741..178014,196195..196263,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,223935..224089,225365..225502)
location: region:177741-225502:1
so has part: feature:177741-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:223935-224089:1:exon
so has part: feature:225365-225502:1:exon

position:225502:1
position: 225502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177741-178014:1:exon

position:178014:1
position: 178014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

position:196195:1
position: 196195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196263:1
position: 196263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:206950-207136:1:exon

position:206950:1
position: 206950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:207136:1
position: 207136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209771-209932:1:exon

position:209771:1
position: 209771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209932:1
position: 209932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:211488-211584:1:exon

position:211488:1
position: 211488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211584:1
position: 211584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:212644-212812:1:exon

position:212644:1
position: 212644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212812:1
position: 212812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:216188-216320:1:exon

position:216188:1
position: 216188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:216320:1
position: 216320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:223325-223512:1:exon

position:223325:1
position: 223325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:223512:1
position: 223512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:223935-224089:1:exon

position:223935:1
position: 223935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:224089:1
position: 224089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:225365-225502:1:exon

position:225365:1
position: 225365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPTIN10
product: septin 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031440990.1
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177853..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,230535..230913)
location: region:177853-230913:1
so has part: feature:177853-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:230535-230913:1:exon

position:177853:1
position: 177853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177853-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

position:200267:1
position: 200267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200387:1
position: 200387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

position:200750:1
position: 200750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:200945:1
position: 200945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230535-230913:1:exon

position:230535:1
position: 230535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPTIN10
product: septin 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031440988.1
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177853..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,226639..226873)
location: region:177853-226873:1
so has part: feature:177853-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:226639-226873:1:exon

position:226873:1
position: 226873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177853-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226639-226873:1:exon

position:226639:1
position: 226639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SEPTIN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPTIN10
product: septin 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031440989.1
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177853..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,225365..225529)
location: region:177853-225529:1
so has part: feature:177853-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:225365-225529:1:exon

position:225529:1
position: 225529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177853-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225365-225529:1:exon

SEPTIN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPTIN10
product: septin 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 47 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031440987.1
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177853..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,223935..224089,225365..225502)
location: region:177853-225502:1
so has part: feature:177853-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:223935-224089:1:exon
so has part: feature:225365-225502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:177853-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223935-224089:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225365-225502:1:exon

SEPTIN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPTIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-10 isoform X4
translation: MASEVARHLLFQSHMAAKTAGMPSQLPDSEQNQKKDNTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDHESSHFYPHVRLKAQTYELQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIKRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGHLPFAVVGSMDEVKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLLCTNMEDLRDQTHTRHYELYRRCKLEELGFTDVGPEHEPLSLQETYEAKRHEFYGERQRKEEEMKQTFVQRVKEKEAMLKEAERELQAKFEHLKRVHQEERMKLEEKRRLLEEEIIAFSKKKATSEIHQNQSFMVPGSSLRKDKDRKKSY
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177988..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,230535..230544)
location: region:177988-230544:1
so has part: feature:177988-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:230535-230544:1:exon

XP_031296850.1
type: Protein
SIO_000068: ncbiprotein

position:177988:1
position: 177988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:230544:1
position: 230544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177988-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:230535-230544:1:exon

SEPTIN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPTIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-10 isoform X2
translation: MASEVARHLLFQSHMAAKTAGMPSQLPDSEQNQKKDNTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDHESSHFYPHVRLKAQTYELQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIKRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGHLPFAVVGSMDEVKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLLCTNMEDLRDQTHTRHYELYRRCKLEELGFTDVGPEHEPLSLQETYEAKRHEFYGERQRKEEEMKQTFVQRVKEKEAMLKEAERELQAKFEHLKRVHQEERMKLEEKRRLLEEEIIAFSKKKATSEIHQNQSFMVPGSSLRKDKDRKKLSNAQVLEGGSGVGEALRAGSLSSRARPVLQR
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177988..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,226639..226738)
location: region:177988-226738:1
so has part: feature:177988-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:226639-226738:1:exon

XP_031296848.1
type: Protein
SIO_000068: ncbiprotein

position:226738:1
position: 226738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177988-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226639-226738:1:exon

SEPTIN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPTIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-10 isoform X3
translation: MASEVARHLLFQSHMAAKTAGMPSQLPDSEQNQKKDNTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDHESSHFYPHVRLKAQTYELQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIKRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGHLPFAVVGSMDEVKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLLCTNMEDLRDQTHTRHYELYRRCKLEELGFTDVGPEHEPLSLQETYEAKRHEFYGERQRKEEEMKQTFVQRVKEKEAMLKEAERELQAKFEHLKRVHQEERMKLEEKRRLLEEEIIAFSKKKATSEIHQNQSFMVPGSSLRKDKDRKNSNFM
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177988..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,225365..225380)
location: region:177988-225380:1
so has part: feature:177988-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:225365-225380:1:exon

XP_031296849.1
type: Protein
SIO_000068: ncbiprotein

position:225380:1
position: 225380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177988-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225365-225380:1:exon

SEPTIN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPTIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-10 isoform X1
translation: MASEVARHLLFQSHMAAKTAGMPSQLPDSEQNQKKDNTRSLTMSGHVGFESLPDQLVNRSIQQGFCFNILCVGETGIGKSTLIDTLFNTNFEDHESSHFYPHVRLKAQTYELQESNVRLKLTIVNTVGFGDQINKEESYQPIVDYIDAQFEAYLQEELKIKRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGHLPFAVVGSMDEVKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLLCTNMEDLRDQTHTRHYELYRRCKLEELGFTDVGPEHEPLSLQETYEAKRHEFYGERQRKEEEMKQTFVQRVKEKEAMLKEAERELQAKFEHLKRVHQEERMKLEEKRRLLEEEIIAFSKKKATSEIHQNQSFMVPGSSLRKDKDRKKEPGYRFELLCFDVRACETSDGRTDTEEGRGAPRPRGGLGSVWRRSQGL
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(177988..178014,196195..196263,200267..200387,200750..200945,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,223935..224082)
location: region:177988-224082:1
so has part: feature:177988-178014:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:200267-200387:1:exon
so has part: feature:200750-200945:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:223935-224082:1:exon

XP_031296847.1
type: Protein
SIO_000068: ncbiprotein

position:224082:1
position: 224082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:177988-178014:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:200267-200387:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:200750-200945:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:223935-224082:1:exon

SEPTIN10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SEPTIN10
product: septin 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031440991.1
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(178172..178187,195083..195198,196195..196263,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,223935..224089,225365..225502)
location: region:178172-225502:1
so has part: feature:178172-178187:1:exon
so has part: feature:195083-195198:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:223935-224089:1:exon
so has part: feature:225365-225502:1:exon

position:178172:1
position: 178172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:178172-178187:1:exon

position:178187:1
position: 178187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:195083-195198:1:exon

position:195083:1
position: 195083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:195198:1
position: 195198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:223935-224089:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225365-225502:1:exon

SEPTIN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPTIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-10 isoform X5
translation: MSSFSLIWQQKQLVCPPNCLTVNRTYQPIVDYIDAQFEAYLQEELKIKRSLFNYHDSRIHVCLYFISPTGHSLKTLDLLTMKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGHLPFAVVGSMDEVKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLLCTNMEDLRDQTHTRHYELYRRCKLEELGFTDVGPEHEPLSLQETYEAKRHEFYGERQRKEEEMKQTFVQRVKEKEAMLKEAERELQAKFEHLKRVHQEERMKLEEKRRLLEEEIIAFSKKKATSEIHQNQSFMVPGSSLRKDKDRKKEPGYRFELLCFDVRACETSDGRTDTEEGRGAPRPRGGLGSVWRRSQGL
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(195194..195198,196195..196263,206950..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,223935..224082)
location: region:195194-224082:1
so has part: feature:195194-195198:1:exon
so has part: feature:196195-196263:1:exon
so has part: feature:206950-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:223935-224082:1:exon

XP_031296851.1
type: Protein
SIO_000068: ncbiprotein

position:195194:1
position: 195194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195194-195198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:196195-196263:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:206950-207136:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:223935-224082:1:exon

LOC105099132
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105099132
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(198644..199887)
location: region:198644-199887:-1
so has part: feature:198644-199887:-1:exon

105099132
type: Gene
SIO_000068: ncbigene

position:198644:-1
position: 198644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:199887:-1
position: 199887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198644-199887:-1:exon

LOC105099132
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105099132
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC105099132
subclass of: SO_0000673
so part of: LOC105099132
location: complement(198644..199219)
location: region:198644-199219:-1
so has part: feature:198644-199219:-1:exon

position:199219:-1
position: 199219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198644-199219:-1:exon

LOC105099132
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105099132
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC105099132
subclass of: SO_0000673
so part of: LOC105099132
location: complement(199863..199887)
location: region:199863-199887:-1
so has part: feature:199863-199887:-1:exon

position:199863:-1
position: 199863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:199863-199887:-1:exon

SEPTIN10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SEPTIN10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: septin-10 isoform X6
translation: MKSLDSKVNIIPVIAKADAISKTELQKFKIKLMSELVSNGVQIYQFPTDDETIAKINASMNGHLPFAVVGSMDEVKVGNKMVKARQYPWGIVQVENENHCDFVKLREMLLCTNMEDLRDQTHTRHYELYRRCKLEELGFTDVGPEHEPLSLQETYEAKRHEFYGERQRKEEEMKQTFVQRVKEKEAMLKEAERELQAKFEHLKRVHQEERMKLEEKRRLLEEEIIAFSKKKATSEIHQNQSFMVPGSSLRKDKDRKKEPGYRFELLCFDVRACETSDGRTDTEEGRGAPRPRGGLGSVWRRSQGL
SIO_010081: SEPTIN10
subclass of: SO_0000673
so part of: SEPTIN10
location: join(207116..207136,209771..209932,211488..211584,212644..212812,216188..216320,223325..223512,223935..224082)
location: region:207116-224082:1
so has part: feature:207116-207136:1:exon
so has part: feature:209771-209932:1:exon
so has part: feature:211488-211584:1:exon
so has part: feature:212644-212812:1:exon
so has part: feature:216188-216320:1:exon
so has part: feature:223325-223512:1:exon
so has part: feature:223935-224082:1:exon

XP_031296852.1
type: Protein
SIO_000068: ncbiprotein

position:207116:1
position: 207116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:207116-207136:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:209771-209932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:211488-211584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212644-212812:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:216188-216320:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:223325-223512:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:223935-224082:1:exon

SH3RF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SH3RF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(241505..358341)
location: region:241505-358341:-1
so has part: feature:241505-358341:-1:exon
subclass of: SO_0000010

105099135
type: Gene
SIO_000068: ncbigene

position:241505:-1
position: 241505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358341:-1
position: 358341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:241505-358341:-1:exon

SH3RF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SH3RF3
product: SH3 domain containing ring finger 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440994.1
SIO_010081: SH3RF3
subclass of: SO_0000673
so part of: SH3RF3
location: complement(join(241505..243848,248468..248796,257211..257542,263927..264150,265918..266088,275404..275480,283355..283708,288003..288098,301222..301477,304994..305000,356762..358341))
location: region:241505-358341:-1
so has part: feature:356762-358341:-1:exon
so has part: feature:304994-305000:-1:exon
so has part: feature:301222-301477:-1:exon
so has part: feature:288003-288098:-1:exon
so has part: feature:283355-283708:-1:exon
so has part: feature:275404-275480:-1:exon
so has part: feature:265918-266088:-1:exon
so has part: feature:263927-264150:-1:exon
so has part: feature:257211-257542:-1:exon
so has part: feature:248468-248796:-1:exon
so has part: feature:241505-243848:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:356762-358341:-1:exon

position:356762:-1
position: 356762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:304994-305000:-1:exon

position:304994:-1
position: 304994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:305000:-1
position: 305000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301222-301477:-1:exon

position:301222:-1
position: 301222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301477:-1
position: 301477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288003-288098:-1:exon

position:288003:-1
position: 288003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:288098:-1
position: 288098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:283355-283708:-1:exon

position:283355:-1
position: 283355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283708:-1
position: 283708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:275404-275480:-1:exon

position:275404:-1
position: 275404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:275480:-1
position: 275480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:265918-266088:-1:exon

position:265918:-1
position: 265918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266088:-1
position: 266088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:263927-264150:-1:exon

position:263927:-1
position: 263927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:264150:-1
position: 264150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:257211-257542:-1:exon

position:257211:-1
position: 257211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:257542:-1
position: 257542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:248468-248796:-1:exon

position:248468:-1
position: 248468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248796:-1
position: 248796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:241505-243848:-1:exon

position:243848:-1
position: 243848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH3RF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SH3RF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase SH3RF3
translation: MLLGAPRLCASRAAAAAQSEGDGDRLGRDMDESSLLDLLECSVCLERLDTTAKVLPCQHTFCRRCLESIVCSRHELRCPECRILVGCGVDELPANILLVRLLDGIRQRPRAGASPGGSPPARPGPSPGPGLGSSPEAASAHGDCGGSAPGSPVLLSAATSATASLRELATGRNAPLVKSLPQPPSGKVPHSHEGKEPGDLRFSKGDVIVLRHRVDEHWYHGFLPTSYVPGLRPLPQAPPQGKALYDFEMKDRDQDKDCLTFSKDEVLTVIRRVDDNWAEGMLGDKIGIFPLLYVELNDAAKQLMEMDKPGLAVASGCLTSLPSDPSTAIRATPGPTSGSTGAVSAFQRRVDSKKNAKKRHSFTALSMTHKSAQAASHRRSMEISAPVLISSSDPRAAARIGDLSHLSCSAPAQDSSSAGPAPAAEQQGMAPKVQLPLNVYLALYAYKPQKSDELELRKGDAYRVLEKCRDGWFKGTALRTGLSGVFPGNYVTPASRVPIGGAGLPRNNVVGGSPLAKGMATTLHPCGGSLSSPATVQHQVQHQEASPPMGSCLRHSAQPAASQARSAAPTAAHPAQTQDRPTATVSPLRTQSSPSRLPTTGLRPPSMGSPQHSHQPVMQMAIGAPGPRTAVQLTSAASAITPPNVSAANLSGEVGGGPISGPSTPSPTSTGGRPDERRNEKKDKKSGLRKLLAGASTRRKSRSPPSTSPTHDPQLPADAVLQGAVGPDVCSRSLHGRAGSCPVEAEMQGALGAEPLHRKAGSLDLSFTSPSRQTPLSMAVRPEPRPLPRERYRVVVSYPPQSEAEIELKEGDVVFVHKKREDGWYKGTLQRNGRTGLFPGSFVESF
SIO_010081: SH3RF3
subclass of: SO_0000673
so part of: SH3RF3
location: complement(join(243680..243848,248468..248796,257211..257542,263927..264150,265918..266088,275404..275480,283355..283708,288003..288098,301222..301477,304994..305000,356762..357287))
location: region:243680-357287:-1
so has part: feature:356762-357287:-1:exon
so has part: feature:304994-305000:-1:exon
so has part: feature:301222-301477:-1:exon
so has part: feature:288003-288098:-1:exon
so has part: feature:283355-283708:-1:exon
so has part: feature:275404-275480:-1:exon
so has part: feature:265918-266088:-1:exon
so has part: feature:263927-264150:-1:exon
so has part: feature:257211-257542:-1:exon
so has part: feature:248468-248796:-1:exon
so has part: feature:243680-243848:-1:exon

XP_031296854.1
type: Protein
SIO_000068: ncbiprotein

position:243680:-1
position: 243680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357287:-1
position: 357287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:356762-357287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:304994-305000:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:301222-301477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288003-288098:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:283355-283708:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:275404-275480:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:265918-266088:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:263927-264150:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:257211-257542:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:248468-248796:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:243680-243848:-1:exon

EDAR
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: EDAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 473596..500327
location: region:473596-500327:1
so has part: feature:473596-500327:1:exon
subclass of: SO_0000010

105099137
type: Gene
SIO_000068: ncbigene

position:473596:1
position: 473596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500327:1
position: 500327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:473596-500327:1:exon

EDAR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: EDAR
product: ectodysplasin A receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440995.1
SIO_010081: EDAR
subclass of: SO_0000673
so part of: EDAR
location: join(473596..475925,477594..477662,478241..478363,478897..479078,484872..484957,490853..490939,492164..492289,492370..492444,492696..492755,493709..493893,494613..494673,498004..500327)
location: region:473596-500327:1
so has part: feature:473596-475925:1:exon
so has part: feature:477594-477662:1:exon
so has part: feature:478241-478363:1:exon
so has part: feature:478897-479078:1:exon
so has part: feature:484872-484957:1:exon
so has part: feature:490853-490939:1:exon
so has part: feature:492164-492289:1:exon
so has part: feature:492370-492444:1:exon
so has part: feature:492696-492755:1:exon
so has part: feature:493709-493893:1:exon
so has part: feature:494613-494673:1:exon
so has part: feature:498004-500327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:473596-475925:1:exon

position:475925:1
position: 475925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:477594-477662:1:exon

position:477594:1
position: 477594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477662:1
position: 477662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:478241-478363:1:exon

position:478241:1
position: 478241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:478363:1
position: 478363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:478897-479078:1:exon

position:478897:1
position: 478897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479078:1
position: 479078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:484872-484957:1:exon

position:484872:1
position: 484872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484957:1
position: 484957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:490853-490939:1:exon

position:490853:1
position: 490853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:490939:1
position: 490939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:492164-492289:1:exon

position:492164:1
position: 492164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492289:1
position: 492289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:492370-492444:1:exon

position:492370:1
position: 492370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492444:1
position: 492444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:492696-492755:1:exon

position:492696:1
position: 492696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492755:1
position: 492755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:493709-493893:1:exon

position:493709:1
position: 493709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493893:1
position: 493893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:494613-494673:1:exon

position:494613:1
position: 494613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494673:1
position: 494673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:498004-500327:1:exon

position:498004:1
position: 498004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EDAR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: EDAR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member EDAR
translation: MQVNPWERMAHEKGCTRTAWLPVLLASLTCSAGAEYSSCGENEFYNQTTGLCHACPQCGPGEEPYLSCGYGTKDEDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDAENDAECGPCLPGYYMMENRPRNIYGLVCYSCLLAPPHTKECVGATVGVSANLPRTPGGSTLSPAQHAHKELSGQGHLATALVIAMSTIFTMAVSIVLIIVFYIVKARPPAPACCASPPVKSAEAPMCEEEEKKEAPENVVIFSEKDEFEKLTAARQRSPASCFHSENDASSEKEQLLNRSLDSDEDPAPDGQGSPERCLLSLVHLAREKSATATRAAGIQSRRKKILEVYAQVCGVAEGLSPTELPFDCLEKASRMLSSTYNSEKAVVKTWRHLAESFGLKRDEIGGMTDGLQLFDRISTAGYSIPELLTKLVQIERLDAVESLCADILEWAGVLPPTPPPPPVS
SIO_010081: EDAR
subclass of: SO_0000673
so part of: EDAR
location: join(475920..475925,477594..477662,478241..478363,478897..479078,484872..484957,490853..490939,492164..492289,492370..492444,492696..492755,493709..493893,494613..494673,498004..498326)
location: region:475920-498326:1
so has part: feature:475920-475925:1:exon
so has part: feature:477594-477662:1:exon
so has part: feature:478241-478363:1:exon
so has part: feature:478897-479078:1:exon
so has part: feature:484872-484957:1:exon
so has part: feature:490853-490939:1:exon
so has part: feature:492164-492289:1:exon
so has part: feature:492370-492444:1:exon
so has part: feature:492696-492755:1:exon
so has part: feature:493709-493893:1:exon
so has part: feature:494613-494673:1:exon
so has part: feature:498004-498326:1:exon

XP_031296855.1
type: Protein
SIO_000068: ncbiprotein

position:475920:1
position: 475920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498326:1
position: 498326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475920-475925:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:477594-477662:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478241-478363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478897-479078:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:484872-484957:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:490853-490939:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:492164-492289:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:492370-492444:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:492696-492755:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:493709-493893:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:494613-494673:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498004-498326:1:exon

LOC116149499
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149499
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 509010..510219
location: region:509010-510219:1
so has part: feature:509010-510219:1:exon
subclass of: SO_0000011

116149499
type: Gene
SIO_000068: ncbigene

position:509010:1
position: 509010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:510219:1
position: 510219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:509010-510219:1:exon

LOC116149499
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149499
product: uncharacterized LOC116149499
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004133084.1
SIO_010081: LOC116149499
subclass of: SO_0000673
so part of: LOC116149499
location: join(509010..509222,509424..509507,509709..510219)
location: region:509010-510219:1
so has part: feature:509010-509222:1:exon
so has part: feature:509424-509507:1:exon
so has part: feature:509709-510219:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:509010-509222:1:exon

position:509222:1
position: 509222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:509424-509507:1:exon

position:509424:1
position: 509424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509507:1
position: 509507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:509709-510219:1:exon

position:509709:1
position: 509709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC138
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CCDC138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(517961..552867)
location: region:517961-552867:-1
so has part: feature:517961-552867:-1:exon
subclass of: SO_0000010

105099084
type: Gene
SIO_000068: ncbigene

position:517961:-1
position: 517961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552867:-1
position: 552867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517961-552867:-1:exon

CCDC138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC138
product: coiled-coil domain containing 138, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031440999.1
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(517961..518421,518705..518843,529312..529504,533747..533863,536862..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552867))
location: region:517961-552867:-1
so has part: feature:552728-552867:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536862-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:517961-518421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552867:-1:exon

position:552728:-1
position: 552728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

position:552129:-1
position: 552129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552186:-1
position: 552186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

position:551457:-1
position: 551457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551577:-1
position: 551577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

position:549579:-1
position: 549579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549703:-1
position: 549703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

position:548270:-1
position: 548270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:548457:-1
position: 548457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

position:545158:-1
position: 545158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545316:-1
position: 545316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

position:541906:-1
position: 541906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:542025:-1
position: 542025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

position:539801:-1
position: 539801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539878:-1
position: 539878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

position:539586:-1
position: 539586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539693:-1
position: 539693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:536862-537026:-1:exon

position:536862:-1
position: 536862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537026:-1
position: 537026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

position:533747:-1
position: 533747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:533863:-1
position: 533863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

position:529312:-1
position: 529312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529504:-1
position: 529504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:518705-518843:-1:exon

position:518705:-1
position: 518705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:518843:-1
position: 518843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:517961-518421:-1:exon

position:518421:-1
position: 518421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC138
product: coiled-coil domain containing 138, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_031440997.1
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(517961..518421,518705..518843,525471..525647,529312..529504,533747..533863,536862..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552867))
location: region:517961-552867:-1
so has part: feature:552728-552867:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536862-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:517961-518421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536862-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

position:525471:-1
position: 525471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525647:-1
position: 525647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:518705-518843:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:517961-518421:-1:exon

CCDC138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC138
product: coiled-coil domain containing 138, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031440998.1
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(517961..518421,518705..518843,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552867))
location: region:517961-552867:-1
so has part: feature:552728-552867:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:517961-518421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

position:536850:-1
position: 536850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518705-518843:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:517961-518421:-1:exon

CCDC138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC138
product: coiled-coil domain containing 138, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031440996.1
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(517961..518421,518705..518843,525471..525647,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552867))
location: region:517961-552867:-1
so has part: feature:552728-552867:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:517961-518421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518705-518843:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:517961-518421:-1:exon

CCDC138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 138 isoform X4
translation: MEPRVVKPPGQDLVVERLKSRYGLGGGCPAEPGRRCSDRAEHQRRPPRTPVDFDIYSCGDKVGSPLKCGSGERTWGPATLCGSLQRRPERCLDDELDPFRDWKQRKTEELIGNGHRVNASKVNEQPFKEIEKALAWPTNLASNSRNWTDCCSNASVSPARQAPSPASKASNRQSVLPHQINQIYDELFHIHQKLQCETTAQQEFAEELQKRERFLVEREQLLFQHETALSKIKGVREEVLTRFQIIKEQHDAEVEHLTEVLKERNKESKRLRSSFDALKELNDSLKKQLNEVSEENKKLEAQAKRVQARLDNLQRKYEFMTIQRLKGNSHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKQEESEVDGEKPVLGPASQRDDIQEKCVKLLPVMAEQLQWMPLVNTKLHEPFVKFLYWSLRQLDTGTQHSTLTSTLRRLGEDIFKGVAAKGVQENSVVHSVESKPRTAAFFKSSSLPLRFLSTLIVLKTVTQGSLRPFLAACSTSLFFRTCSVLLRAPKLDLHILEKLSIILQKLSKIKSNKKLFELFTIHLMLQEIQRTTHPEHAFLCINLNSTLFNLGLTKSNSLASGANH
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518256..518421,518705..518843,529312..529504,533747..533863,536862..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552820))
location: region:518256-552820:-1
so has part: feature:552728-552820:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536862-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:518256-518421:-1:exon

XP_031296859.1
type: Protein
SIO_000068: ncbiprotein

position:518256:-1
position: 518256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:552820:-1
position: 552820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536862-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518705-518843:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518256-518421:-1:exon

CCDC138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 138 isoform X2
translation: MEPRVVKPPGQDLVVERLKSRYGLGGGCPAEPGRRCSDRAEHQRRPPRTPVDFDIYSCGDKVGSPLKCGSGERTWGPATLCGSLQRRPERCLDDELDPFRDWKQRKTEELIGNGHRVNASKVNEQPFKEIEKALAWPTNLASNSRNWTDCCSNASVSPARQAPSPASKASNRQSVLPHQINQIYDELFHIHQKLQCETTAQQEFAEELQKRERFLVEREQLLFQHETALSKIKGVREEVLTRFQIIKEQHDAEVEHLTEVLKERNKESKRLRSSFDALKELNDSLKKQLNEVSEENKKLEAQAKRVQARLDNLQRKYEFMTIQRLKGNSHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKQEESEVDGEKPVLGPASQRDDIQEKCVKLLPVMAEQLQWMPLVNTKLHEPFVKFLYWSLRQLDTGTQHSTLTSTLRRLGEDIFKGVAAKGVQENSVVHSVESKPRTAAFFKSSSLPLRFLSTLIVLKTVTQADFLARAFDSLCVDLKTEEGKALFLEYQAVPVILSHLKVSSKGLLSSVIDSLLQMTVESRSLRPFLAACSTSLFFRTCSVLLRAPKLDLHILEKLSIILQKLSKIKSNKKLFELFTIHLMLQEIQRTTHPEHAFLCINLNSTLFNLGLTKSNSLASGANH
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518256..518421,518705..518843,525471..525647,529312..529504,533747..533863,536862..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552820))
location: region:518256-552820:-1
so has part: feature:552728-552820:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536862-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:518256-518421:-1:exon

XP_031296857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536862-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518705-518843:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518256-518421:-1:exon

CCDC138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 138 isoform X3
translation: MEPRVVKPPGQDLVVERLKSRYGLGGGCPAEPGRRCSDRAEHQRRPPRTPVDFDIYSCGDKVGSPLKCGSGERTWGPATLCGSLQRRPERCLDDELDPFRDWKQRKTEELIGNGHRVNASKVNEQPFKEIEKALAWPTNLASNSRNWTDCCSNASVSPARQAPSPASKASNRQSVLPHQINQIYDELFHIHQKLQCETTAQQEFAEELQKRERFLVEREQLLFQHETALSKIKGVREEVLTRFQIIKEQHDAEVEHLTEVLKERNKESKRLRSSFDALKELNDSLKKQLNEVSEENKKLEAQAKRVQARLDNLQRKYEFMTIQRLKGNSHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKQEESEVDGEKPVLGPASQRDDIQEKCVKVCFQLLPVMAEQLQWMPLVNTKLHEPFVKFLYWSLRQLDTGTQHSTLTSTLRRLGEDIFKGVAAKGVQENSVVHSVESKPRTAAFFKSSSLPLRFLSTLIVLKTVTQGSLRPFLAACSTSLFFRTCSVLLRAPKLDLHILEKLSIILQKLSKIKSNKKLFELFTIHLMLQEIQRTTHPEHAFLCINLNSTLFNLGLTKSNSLASGANH
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518256..518421,518705..518843,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552820))
location: region:518256-552820:-1
so has part: feature:552728-552820:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:518256-518421:-1:exon

XP_031296858.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:518705-518843:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518256-518421:-1:exon

CCDC138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 138 isoform X1
translation: MEPRVVKPPGQDLVVERLKSRYGLGGGCPAEPGRRCSDRAEHQRRPPRTPVDFDIYSCGDKVGSPLKCGSGERTWGPATLCGSLQRRPERCLDDELDPFRDWKQRKTEELIGNGHRVNASKVNEQPFKEIEKALAWPTNLASNSRNWTDCCSNASVSPARQAPSPASKASNRQSVLPHQINQIYDELFHIHQKLQCETTAQQEFAEELQKRERFLVEREQLLFQHETALSKIKGVREEVLTRFQIIKEQHDAEVEHLTEVLKERNKESKRLRSSFDALKELNDSLKKQLNEVSEENKKLEAQAKRVQARLDNLQRKYEFMTIQRLKGNSHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKQEESEVDGEKPVLGPASQRDDIQEKCVKVCFQLLPVMAEQLQWMPLVNTKLHEPFVKFLYWSLRQLDTGTQHSTLTSTLRRLGEDIFKGVAAKGVQENSVVHSVESKPRTAAFFKSSSLPLRFLSTLIVLKTVTQADFLARAFDSLCVDLKTEEGKALFLEYQAVPVILSHLKVSSKGLLSSVIDSLLQMTVESRSLRPFLAACSTSLFFRTCSVLLRAPKLDLHILEKLSIILQKLSKIKSNKKLFELFTIHLMLQEIQRTTHPEHAFLCINLNSTLFNLGLTKSNSLASGANH
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518256..518421,518705..518843,525471..525647,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552820))
location: region:518256-552820:-1
so has part: feature:552728-552820:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518705-518843:-1:exon
so has part: feature:518256-518421:-1:exon

XP_031296856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518705-518843:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:518256-518421:-1:exon

CCDC138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC138
product: coiled-coil domain containing 138, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031441001.1
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518706..518948,525471..525647,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552867))
location: region:518706-552867:-1
so has part: feature:552728-552867:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518706-518948:-1:exon

position:518706:-1
position: 518706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518706-518948:-1:exon

position:518948:-1
position: 518948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC138
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC138
product: coiled-coil domain containing 138, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031441000.1
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518706..518954,525471..525647,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552867))
location: region:518706-552867:-1
so has part: feature:552728-552867:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518706-518954:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518706-518954:-1:exon

position:518954:-1
position: 518954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCDC138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 138 isoform X6
translation: MEPRVVKPPGQDLVVERLKSRYGLGGGCPAEPGRRCSDRAEHQRRPPRTPVDFDIYSCGDKVGSPLKCGSGERTWGPATLCGSLQRRPERCLDDELDPFRDWKQRKTEELIGNGHRVNASKVNEQPFKEIEKALAWPTNLASNSRNWTDCCSNASVSPARQAPSPASKASNRQSVLPHQINQIYDELFHIHQKLQCETTAQQEFAEELQKRERFLVEREQLLFQHETALSKIKGVREEVLTRFQIIKEQHDAEVEHLTEVLKERNKESKRLRSSFDALKELNDSLKKQLNEVSEENKKLEAQAKRVQARLDNLQRKYEFMTIQRLKGNSHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKQEESEVDGEKPVLGPASQRDDIQEKCVKVCFQLLPVMAEQLQWMPLVNTKLHEPFVKFLYWSLRQLDTGTQHSTLTSTLRRLGEDIFKGVAAKGVQENSVVHSVESKPRTAAFFKSSSLPLRFLSTLIVLKTVTQADFLARAFDSLCVDLKTEEGKALFLEYQAVPVILSHLKVSSKGLLSSVIDSLLQMTVESMWKG
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518935..518948,525471..525647,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552820))
location: region:518935-552820:-1
so has part: feature:552728-552820:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518935-518948:-1:exon

XP_031296861.1
type: Protein
SIO_000068: ncbiprotein

position:518935:-1
position: 518935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518935-518948:-1:exon

CCDC138
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC138
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: coiled-coil domain-containing protein 138 isoform X5
translation: MEPRVVKPPGQDLVVERLKSRYGLGGGCPAEPGRRCSDRAEHQRRPPRTPVDFDIYSCGDKVGSPLKCGSGERTWGPATLCGSLQRRPERCLDDELDPFRDWKQRKTEELIGNGHRVNASKVNEQPFKEIEKALAWPTNLASNSRNWTDCCSNASVSPARQAPSPASKASNRQSVLPHQINQIYDELFHIHQKLQCETTAQQEFAEELQKRERFLVEREQLLFQHETALSKIKGVREEVLTRFQIIKEQHDAEVEHLTEVLKERNKESKRLRSSFDALKELNDSLKKQLNEVSEENKKLEAQAKRVQARLDNLQRKYEFMTIQRLKGNSHAAQEVKSLKQEKAPVSKPCKVPLNGQVYELLTVFMDWISDHHLSKLKQEESEVDGEKPVLGPASQRDDIQEKCVKVCFQLLPVMAEQLQWMPLVNTKLHEPFVKFLYWSLRQLDTGTQHSTLTSTLRRLGEDIFKGVAAKGVQENSVVHSVESKPRTAAFFKSSSLPLRFLSTLIVLKTVTQADFLARAFDSLCVDLKTEEGKALFLEYQAVPVILSHLKVSSKGLLSSVIDSLLQMTVESISVWKG
SIO_010081: CCDC138
subclass of: SO_0000673
so part of: CCDC138
location: complement(join(518935..518954,525471..525647,529312..529504,533747..533863,536850..537026,539586..539693,539801..539878,541906..542025,545158..545316,548270..548457,549579..549703,551457..551577,552129..552186,552728..552820))
location: region:518935-552820:-1
so has part: feature:552728-552820:-1:exon
so has part: feature:552129-552186:-1:exon
so has part: feature:551457-551577:-1:exon
so has part: feature:549579-549703:-1:exon
so has part: feature:548270-548457:-1:exon
so has part: feature:545158-545316:-1:exon
so has part: feature:541906-542025:-1:exon
so has part: feature:539801-539878:-1:exon
so has part: feature:539586-539693:-1:exon
so has part: feature:536850-537026:-1:exon
so has part: feature:533747-533863:-1:exon
so has part: feature:529312-529504:-1:exon
so has part: feature:525471-525647:-1:exon
so has part: feature:518935-518954:-1:exon

XP_031296860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:552728-552820:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:552129-552186:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:551457-551577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:549579-549703:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:548270-548457:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:545158-545316:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:541906-542025:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:539801-539878:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:539586-539693:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:536850-537026:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:533747-533863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:529312-529504:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:525471-525647:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518935-518954:-1:exon

RGPD4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RGPD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(553961..605766)
location: region:553961-605766:-1
so has part: feature:553961-605766:-1:exon
subclass of: SO_0000010

105099086
type: Gene
SIO_000068: ncbigene

position:553961:-1
position: 553961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605766:-1
position: 605766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553961-605766:-1:exon

RGPD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RGPD4
product: RANBP2 like and GRIP domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 37 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031441003.1
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(553961..555151,555537..555871,556002..556275,557590..557735,560260..560361,561535..561739,564505..564683,564963..565055,565644..565814,568033..568110,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597702,605584..605761))
location: region:553961-605761:-1
so has part: feature:605584-605761:-1:exon
so has part: feature:597638-597702:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:568033-568110:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:564963-565055:-1:exon
so has part: feature:564505-564683:-1:exon
so has part: feature:561535-561739:-1:exon
so has part: feature:560260-560361:-1:exon
so has part: feature:557590-557735:-1:exon
so has part: feature:556002-556275:-1:exon
so has part: feature:555537-555871:-1:exon
so has part: feature:553961-555151:-1:exon

position:605761:-1
position: 605761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605761:-1:exon

position:605584:-1
position: 605584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597702:-1:exon

position:597638:-1
position: 597638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:597702:-1
position: 597702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

position:596247:-1
position: 596247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:596358:-1
position: 596358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

position:595347:-1
position: 595347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:595499:-1
position: 595499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

position:592832:-1
position: 592832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593062:-1
position: 593062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

position:592360:-1
position: 592360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592505:-1
position: 592505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

position:590573:-1
position: 590573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590765:-1
position: 590765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

position:586279:-1
position: 586279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586366:-1
position: 586366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

position:584320:-1
position: 584320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584529:-1
position: 584529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

position:583078:-1
position: 583078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583259:-1
position: 583259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

position:582816:-1
position: 582816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582991:-1
position: 582991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

position:582539:-1
position: 582539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:582662:-1
position: 582662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

position:581701:-1
position: 581701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581862:-1
position: 581862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

position:581299:-1
position: 581299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581436:-1
position: 581436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

position:581074:-1
position: 581074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:581220:-1
position: 581220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

position:580036:-1
position: 580036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580215:-1
position: 580215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

position:579866:-1
position: 579866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579949:-1
position: 579949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

position:577709:-1
position: 577709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:577844:-1
position: 577844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

position:574337:-1
position: 574337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574431:-1
position: 574431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

position:568665:-1
position: 568665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573450:-1
position: 573450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:568033-568110:-1:exon

position:568033:-1
position: 568033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:568110:-1
position: 568110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:565644-565814:-1:exon

position:565644:-1
position: 565644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565814:-1
position: 565814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:564963-565055:-1:exon

position:564963:-1
position: 564963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:565055:-1
position: 565055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:564505-564683:-1:exon

position:564505:-1
position: 564505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:564683:-1
position: 564683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:561535-561739:-1:exon

position:561535:-1
position: 561535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561739:-1
position: 561739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:560260-560361:-1:exon

position:560260:-1
position: 560260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560361:-1
position: 560361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:557590-557735:-1:exon

position:557590:-1
position: 557590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557735:-1
position: 557735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:556002-556275:-1:exon

position:556002:-1
position: 556002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556275:-1
position: 556275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:555537-555871:-1:exon

position:555537:-1
position: 555537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555871:-1
position: 555871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:553961-555151:-1:exon

position:555151:-1
position: 555151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RGPD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RGPD4
product: RANBP2 like and GRIP domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 38 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031441002.1
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(553961..555151,555537..555871,556002..556275,557590..557735,560260..560361,561535..561739,564505..564683,564963..565055,565644..565814,568033..568110,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597705,605584..605761))
location: region:553961-605761:-1
so has part: feature:605584-605761:-1:exon
so has part: feature:597638-597705:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:568033-568110:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:564963-565055:-1:exon
so has part: feature:564505-564683:-1:exon
so has part: feature:561535-561739:-1:exon
so has part: feature:560260-560361:-1:exon
so has part: feature:557590-557735:-1:exon
so has part: feature:556002-556275:-1:exon
so has part: feature:555537-555871:-1:exon
so has part: feature:553961-555151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605761:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597705:-1:exon

position:597705:-1
position: 597705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:568033-568110:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:565644-565814:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:564963-565055:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:564505-564683:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:561535-561739:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:560260-560361:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:557590-557735:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:556002-556275:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:555537-555871:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:553961-555151:-1:exon

RGPD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RGPD4
product: RANBP2 like and GRIP domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031441004.1
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(553961..555151,555537..555871,556002..556275,557590..557735,560260..560361,561535..561739,564505..564683,564963..565055,565644..565814,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597705,605584..605760))
location: region:553961-605760:-1
so has part: feature:605584-605760:-1:exon
so has part: feature:597638-597705:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:564963-565055:-1:exon
so has part: feature:564505-564683:-1:exon
so has part: feature:561535-561739:-1:exon
so has part: feature:560260-560361:-1:exon
so has part: feature:557590-557735:-1:exon
so has part: feature:556002-556275:-1:exon
so has part: feature:555537-555871:-1:exon
so has part: feature:553961-555151:-1:exon

position:605760:-1
position: 605760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605760:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:565644-565814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:564963-565055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:564505-564683:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:561535-561739:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:560260-560361:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:557590-557735:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:556002-556275:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:555537-555871:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:553961-555151:-1:exon

RGPD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RGPD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ranBP2-like and GRIP domain-containing protein 4 isoform X2
translation: MRRSKADVERYIASVQGSAPSPRESMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDPKAHRFLGLLYEVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVSDGRAKYWVERAAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELHARPDDIHMNIRLVELYRSNGRLRDAVTHCRQVERSAALRSSLEWNACAVQTLKEYLESSQCLESDKSNWRSTSKDLLLAYANLMLLTLSARDVQESRELLESFDSALQSVKSCVGANDELSATFVEVRGHLYMHAGSLLLKMGQHSTVQWRALAELAALCYLVAFQVPRPKIKLIKGDAGQNLLEMMAYDRLSQSGHMLLNLSRDKQDFLKEVVESFANESGQSALYDALFSSRSPKDRSFLGSDVIGNLDVQAPEPEDLARCDVGAVRAHGGSLQHLTWLGLQWNSLPSLPVIRKWLKQLFHHLPQETSRLETNAPESICTLDLEVFLIGVIYTSHLQLKEKCNSHYSFYQPLCLPLPVCKQLCTERQKAWWDAVCNLIHRKAIPGTSAKLRLLVQHDINTLRGQEKHGLQPALLVHWAQCLQKTGSGLNSFYDQREYIGRSVHYWKKVLPLLKIIKKKSSIPEPTDPLFKHFHSADIQASEIGEYEEEAHITFAILDAVNGNIEDAMTAFESINNVVSYWNLALIFHRKAEDIENDVLSPEEQEECKNYLRKARDYLIKILDDSDSSLSVVQKLPVPLESVKEMLNSVMQELDDYSEGGPFYKNGSLRNADSEMKHSTPSPTKYSLSPSKSYKYSPRTPPRWAEDQNSLLKMICQQVEAIKKEMQELRLNSSNSGSPHRWPAENYGPDSVPDGHQGPQNFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGPVYGMNRLPPQQHIYTYAQQMHTPPVQSSSACMFSQDMYGPPLRFESPATGILSPRSDDYFNYNVQQTSTNPPLPEPGYFTKPPVAAHASRSAESKVIEFGKPNFVQPVPGEGIRPSLAAPAHPAQPTSFKFNSNFKSNDGDFTFSSPQVVAQPPSTTYNNSESLLGLLTSDKPLQGDSYSGPKAAQTIGPRNTFNFGSKNVPEISFTENMGPNQQKNSGFRRSEETFTFHSPGKSVFGAPAAEPANRSPEADGGSAHGEDDEDGPHFEPVVPLPDKIEVKTGEEDEEEYFCNRAKLFRFDGGSREWKERGVGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDTALAPMAGSDRSFVWCALDYADESPKPEQLAIRFKTPEEAALFKCKFEEAQSLLKASGANIATTTSQAARTVKEPTSHDSTDICKPDAGNMNFEFQVAKKEGSWWHCNSCSLRNAATAKKCVSCQNLNPSSKDLLGPPLVETVSTPKTSSESAPERFALMAPKKEGHWDCSVCLVRNEPTVSRCIACRNTKSASKSGSPFVQQPSFKFGQGDLPKSASSDFRSVFSIKEGQWDCSVCLVRNEGSSTRCVACENPRKQSVPASAVPAPASFKFGSSETNKAPESGFEGVFAKKEGQWGCSLCLVQNEAGVAQCVACQNPRRQNPPTPAAPAPAPAPAEVSKAPKSGLEGLFPKKEGQWDCSVCLVPNEGSSARCVACQNPRKQSVPASAAPAPASFKFGSSETSKAPESGLEEEAFPKKEGQWDCGVCSVLNESSSLKCLACDASKPAHKPVAEEPSAFSLGSTAKVNDSSGSQVGTGFKNNFSEKAFKYGNSEQGFKFGHVDQENVPSFKFQGSSSTESRSTKEGFSFSVPVPADGFKFGIQETGNQEEKSEKPLESDSGRQAQEAGGQKDGAAVGFGQAGSTFTFADLAKSTSGEGFQFGKKDPDFKGFSGAGEKLFSSQSGKMADQADTCADLEKDDDKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGNA…
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(554846..555151,555537..555871,556002..556275,557590..557735,560260..560361,561535..561739,564505..564683,564963..565055,565644..565814,568033..568110,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597702,605584..605655))
location: region:554846-605655:-1
so has part: feature:605584-605655:-1:exon
so has part: feature:597638-597702:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:568033-568110:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:564963-565055:-1:exon
so has part: feature:564505-564683:-1:exon
so has part: feature:561535-561739:-1:exon
so has part: feature:560260-560361:-1:exon
so has part: feature:557590-557735:-1:exon
so has part: feature:556002-556275:-1:exon
so has part: feature:555537-555871:-1:exon
so has part: feature:554846-555151:-1:exon

XP_031296863.1
type: Protein
SIO_000068: ncbiprotein

position:554846:-1
position: 554846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:605655:-1
position: 605655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597702:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:568033-568110:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:565644-565814:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:564963-565055:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:564505-564683:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:561535-561739:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:560260-560361:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:557590-557735:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:556002-556275:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:555537-555871:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:554846-555151:-1:exon

RGPD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RGPD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ranBP2-like and GRIP domain-containing protein 4 isoform X3
translation: MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDPKAHRFLGLLYEVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVSDGRAKYWVERAAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELHARPDDIHMNIRLVELYRSNGRLRDAVTHCRQVERSAALRSSLEWNACAVQTLKEYLESSQCLESDKSNWRSTSKDLLLAYANLMLLTLSARDVQESRELLESFDSALQSVKSCVGANDELSATFVEVRGHLYMHAGSLLLKMGQHSTVQWRALAELAALCYLVAFQVPRPKIKLIKGDAGQNLLEMMAYDRLSQSGHMLLNLSRDKQDFLKEVVESFANESGQSALYDALFSSRSPKDRSFLGSDVIGNLDVQAPEPEDLARCDVGAVRAHGGSLQHLTWLGLQWNSLPSLPVIRKWLKQLFHHLPQETSRLETNAPESICTLDLEVFLIGVIYTSHLQLKEKCNSHYSFYQPLCLPLPVCKQLCTERQKAWWDAVCNLIHRKAIPGTSAKLRLLVQHDINTLRGQEKHGLQPALLVHWAQCLQKTGSGLNSFYDQREYIGRSVHYWKKVLPLLKIIKKKSSIPEPTDPLFKHFHSADIQASEIGEYEEEAHITFAILDAVNGNIEDAMTAFESINNVVSYWNLALIFHRKAEDIENDVLSPEEQEECKNYLRKARDYLIKILDDSDSSLSVVQKLPVPLESVKEMLNSVMQELDDYSEGGPFYKNGSLRNADSEMKHSTPSPTKYSLSPSKSYKYSPRTPPRWAEDQNSLLKMICQQVEAIKKEMQELRLNSSNSGSPHRWPAENYGPDSVPDGHQGPQNFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGPVYGMNRLPPQQHIYTYAQQMHTPPVQSSSACMFSQDMYGPPLRFESPATGILSPRSDDYFNYNVQQTSTNPPLPEPGYFTKPPVAAHASRSAESKVIEFGKPNFVQPVPGEGIRPSLAAPAHPAQPTSFKFNSNFKSNDGDFTFSSPQVVAQPPSTTYNNSESLLGLLTSDKPLQGDSYSGPKAAQTIGPRNTFNFGSKNVPEISFTENMGPNQQKNSGFRRSEETFTFHSPGKSVFGAPAAEPANRSPEADGGSAHGEDDEDGPHFEPVVPLPDKIEVKTGEEDEEEYFCNRAKLFRFDGGSREWKERGVGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDTALAPMAGSDRSFVWCALDYADESPKPEQLAIRFKTPEEAALFKCKFEEAQSLLKASGANIATTTSQAARTVKEPTSHDSTDICKPDAGNMNFEFQVAKKEGSWWHCNSCSLRNAATAKKCVSCQNLNPSSKDLLGPPLVETVSTPKTSSESAPERFALMAPKKEGHWDCSVCLVRNEPTVSRCIACRNTKSASKSGSPFVQQPSFKFGQGDLPKSASSDFRSVFSIKEGQWDCSVCLVRNEGSSTRCVACENPRKQSVPASAVPAPASFKFGSSETNKAPESGFEGVFAKKEGQWGCSLCLVQNEAGVAQCVACQNPRRQNPPTPAAPAPAPAPAEVSKAPKSGLEGLFPKKEGQWDCSVCLVPNEGSSARCVACQNPRKQSVPASAAPAPASFKFGSSETSKAPESGLEEEAFPKKEGQWDCGVCSVLNESSSLKCLACDASKPAHKPVAEEPSAFSLGSTAKVNDSSGSQVGTGFKNNFSEKAFKYGNSEQGFKFGHVDQENVPSFKFQGSSSTESRSTKEGFSFSVPVPADGFKFGIQETGNQEEKSEKPLESDSGRQAQEAGGQKDGAAVGFGQAGSTFTFADLAKSTSGEGFQFGKKDPDFKGFSGAGEKLFSSQSGKMADQADTCADLEKDDDKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGN…
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(554846..555151,555537..555871,556002..556275,557590..557735,560260..560361,561535..561739,564505..564683,564963..565055,565644..565814,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597705,605584..605655))
location: region:554846-605655:-1
so has part: feature:605584-605655:-1:exon
so has part: feature:597638-597705:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:564963-565055:-1:exon
so has part: feature:564505-564683:-1:exon
so has part: feature:561535-561739:-1:exon
so has part: feature:560260-560361:-1:exon
so has part: feature:557590-557735:-1:exon
so has part: feature:556002-556275:-1:exon
so has part: feature:555537-555871:-1:exon
so has part: feature:554846-555151:-1:exon

XP_031296864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:565644-565814:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:564963-565055:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:564505-564683:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:561535-561739:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:560260-560361:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:557590-557735:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:556002-556275:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:555537-555871:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:554846-555151:-1:exon

RGPD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RGPD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ranBP2-like and GRIP domain-containing protein 4 isoform X1
translation: MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDPKAHRFLGLLYEVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVSDGRAKYWVERAAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELHARPDDIHMNIRLVELYRSNGRLRDAVTHCRQVERSAALRSSLEWNACAVQTLKEYLESSQCLESDKSNWRSTSKDLLLAYANLMLLTLSARDVQESRELLESFDSALQSVKSCVGANDELSATFVEVRGHLYMHAGSLLLKMGQHSTVQWRALAELAALCYLVAFQVPRPKIKLIKGDAGQNLLEMMAYDRLSQSGHMLLNLSRDKQDFLKEVVESFANESGQSALYDALFSSRSPKDRSFLGSDVIGNLDVQAPEPEDLARCDVGAVRAHGGSLQHLTWLGLQWNSLPSLPVIRKWLKQLFHHLPQETSRLETNAPESICTLDLEVFLIGVIYTSHLQLKEKCNSHYSFYQPLCLPLPVCKQLCTERQKAWWDAVCNLIHRKAIPGTSAKLRLLVQHDINTLRGQEKHGLQPALLVHWAQCLQKTGSGLNSFYDQREYIGRSVHYWKKVLPLLKIIKKKSSIPEPTDPLFKHFHSADIQASEIGEYEEEAHITFAILDAVNGNIEDAMTAFESINNVVSYWNLALIFHRKAEDIENDVLSPEEQEECKNYLRKARDYLIKILDDSDSSLSVVQKLPVPLESVKEMLNSVMQELDDYSEGGPFYKNGSLRNADSEMKHSTPSPTKYSLSPSKSYKYSPRTPPRWAEDQNSLLKMICQQVEAIKKEMQELRLNSSNSGSPHRWPAENYGPDSVPDGHQGPQNFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGPVYGMNRLPPQQHIYTYAQQMHTPPVQSSSACMFSQDMYGPPLRFESPATGILSPRSDDYFNYNVQQTSTNPPLPEPGYFTKPPVAAHASRSAESKVIEFGKPNFVQPVPGEGIRPSLAAPAHPAQPTSFKFNSNFKSNDGDFTFSSPQVVAQPPSTTYNNSESLLGLLTSDKPLQGDSYSGPKAAQTIGPRNTFNFGSKNVPEISFTENMGPNQQKNSGFRRSEETFTFHSPGKSVFGAPAAEPANRSPEADGGSAHGEDDEDGPHFEPVVPLPDKIEVKTGEEDEEEYFCNRAKLFRFDGGSREWKERGVGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDTALAPMAGSDRSFVWCALDYADESPKPEQLAIRFKTPEEAALFKCKFEEAQSLLKASGANIATTTSQAARTVKEPTSHDSTDICKPDAGNMNFEFQVAKKEGSWWHCNSCSLRNAATAKKCVSCQNLNPSSKDLLGPPLVETVSTPKTSSESAPERFALMAPKKEGHWDCSVCLVRNEPTVSRCIACRNTKSASKSGSPFVQQPSFKFGQGDLPKSASSDFRSVFSIKEGQWDCSVCLVRNEGSSTRCVACENPRKQSVPASAVPAPASFKFGSSETNKAPESGFEGVFAKKEGQWGCSLCLVQNEAGVAQCVACQNPRRQNPPTPAAPAPAPAPAEVSKAPKSGLEGLFPKKEGQWDCSVCLVPNEGSSARCVACQNPRKQSVPASAAPAPASFKFGSSETSKAPESGLEEEAFPKKEGQWDCGVCSVLNESSSLKCLACDASKPAHKPVAEEPSAFSLGSTAKVNDSSGSQVGTGFKNNFSEKAFKYGNSEQGFKFGHVDQENVPSFKFQGSSSTESRSTKEGFSFSVPVPADGFKFGIQETGNQEEKSEKPLESDSGRQAQEAGGQKDGAAVGFGQAGSTFTFADLAKSTSGEGFQFGKKDPDFKGFSGAGEKLFSSQSGKMADQADTCADLEKDDDKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGN…
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(554846..555151,555537..555871,556002..556275,557590..557735,560260..560361,561535..561739,564505..564683,564963..565055,565644..565814,568033..568110,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597705,605584..605655))
location: region:554846-605655:-1
so has part: feature:605584-605655:-1:exon
so has part: feature:597638-597705:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:568033-568110:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:564963-565055:-1:exon
so has part: feature:564505-564683:-1:exon
so has part: feature:561535-561739:-1:exon
so has part: feature:560260-560361:-1:exon
so has part: feature:557590-557735:-1:exon
so has part: feature:556002-556275:-1:exon
so has part: feature:555537-555871:-1:exon
so has part: feature:554846-555151:-1:exon

XP_031296862.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:568033-568110:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:565644-565814:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:564963-565055:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:564505-564683:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:561535-561739:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:560260-560361:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:557590-557735:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:556002-556275:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:555537-555871:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:554846-555151:-1:exon

RGPD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RGPD4
product: RANBP2 like and GRIP domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031441005.1
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(565103..565548,565644..565814,568033..568110,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597705,605584..605766))
location: region:565103-605766:-1
so has part: feature:605584-605766:-1:exon
so has part: feature:597638-597705:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:568033-568110:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:565103-565548:-1:exon

position:565103:-1
position: 565103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605766:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:568033-568110:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:565644-565814:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:565103-565548:-1:exon

position:565548:-1
position: 565548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RGPD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RGPD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ranBP2-like and GRIP domain-containing protein 4 isoform X4
translation: MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDPKAHRFLGLLYEVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVSDGRAKYWVERAAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELHARPDDIHMNIRLVELYRSNGRLRDAVTHCRQVERSAALRSSLEWNACAVQTLKEYLESSQCLESDKSNWRSTSKDLLLAYANLMLLTLSARDVQESRELLESFDSALQSVKSCVGANDELSATFVEVRGHLYMHAGSLLLKMGQHSTVQWRALAELAALCYLVAFQVPRPKIKLIKGDAGQNLLEMMAYDRLSQSGHMLLNLSRDKQDFLKEVVESFANESGQSALYDALFSSRSPKDRSFLGSDVIGNLDVQAPEPEDLARCDVGAVRAHGGSLQHLTWLGLQWNSLPSLPVIRKWLKQLFHHLPQETSRLETNAPESICTLDLEVFLIGVIYTSHLQLKEKCNSHYSFYQPLCLPLPVCKQLCTERQKAWWDAVCNLIHRKAIPGTSAKLRLLVQHDINTLRGQEKHGLQPALLVHWAQCLQKTGSGLNSFYDQREYIGRSVHYWKKVLPLLKIIKKKSSIPEPTDPLFKHFHSADIQASEIGEYEEEAHITFAILDAVNGNIEDAMTAFESINNVVSYWNLALIFHRKAEDIENDVLSPEEQEECKNYLRKARDYLIKILDDSDSSLSVVQKLPVPLESVKEMLNSVMQELDDYSEGGPFYKNGSLRNADSEMKHSTPSPTKYSLSPSKSYKYSPRTPPRWAEDQNSLLKMICQQVEAIKKEMQELRLNSSNSGSPHRWPAENYGPDSVPDGHQGPQNFHGAPLTVATTGPSVYYSQSPAYNSQYLLRPAANVTPTKGPVYGMNRLPPQQHIYTYAQQMHTPPVQSSSACMFSQDMYGPPLRFESPATGILSPRSDDYFNYNVQQTSTNPPLPEPGYFTKPPVAAHASRSAESKVIEFGKPNFVQPVPGEGIRPSLAAPAHPAQPTSFKFNSNFKSNDGDFTFSSPQVVAQPPSTTYNNSESLLGLLTSDKPLQGDSYSGPKAAQTIGPRNTFNFGSKNVPEISFTENMGPNQQKNSGFRRSEETFTFHSPGKSVFGAPAAEPANRSPEADGGSAHGEDDEDGPHFEPVVPLPDKIEVKTGEEDEEEYFCNRAKLFRFDGGSREWKERGVGNVKILRHKTSGKIRLLMRREQVLKICANHYISPDTALAPMAGSDRSFVWCALDYADESPKPEQLAIRFKTPEEAALFKCKFEEAQSLLKASGANIATTTSQAARTVKEPTSHDSTDICKPDAGNMNFEFQVAKKEGSWWHCNSCSLRNAATAKKCVSCQNLNPSSKDLLGPPLVETVSTPKTSSESAPERFALMAPKKEGHWDCSVCLVRNEPTVSRCIACRNTKSASKSGSPFVQQPSFKFGQGDLPKSASSDFRSVFSIKEGQWDCSVCLVRNEGSSTRCVACENPRKQSVPASAVPAPASFKFGSSETNKAPESGFEGVFAKKEGQWGCSLCLVQNEAGVAQCVACQNPRRQNPPTPAAPAPAPAPAEVSKAPKSGLEGLFPKKEGQWDCSVCLVPNEGSSARCVACQNPRKQSVPASAAPAPASFKFGSSETSKAPESGLEEEAFPKKEGQWDCGVCSVLNESSSLKCLACDASKPAHKPVAEEPSAFSLGSTAKVNDSSGSQVGTGFKNNFSEKAFKYGNSEQGFKFGHVDQENVPSFKFQGSSSTESRSTKEGFSFSVPVPADGFKFGIQETGNQEEKSEKPLESDSGRQAQEAGGQKDGAAVGFGQAGSTFTFADLAKSTSGEGFQFGKKDPDFKGFSGAGEKLFSSQSGKMADQADTCADLEKDDDKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLKILKNEVNGKLRMLMRREQVLKVCANHWITTTMHLKPLSGSDRAWMWLASDFSDGN…
SIO_010081: RGPD4
subclass of: SO_0000673
so part of: RGPD4
location: complement(join(565454..565548,565644..565814,568033..568110,568665..573450,574337..574431,577709..577844,579866..579949,580036..580215,581074..581220,581299..581436,581701..581862,582539..582662,582816..582991,583078..583259,584320..584529,586279..586366,590573..590765,592360..592505,592832..593062,595347..595499,596247..596358,597638..597705,605584..605655))
location: region:565454-605655:-1
so has part: feature:605584-605655:-1:exon
so has part: feature:597638-597705:-1:exon
so has part: feature:596247-596358:-1:exon
so has part: feature:595347-595499:-1:exon
so has part: feature:592832-593062:-1:exon
so has part: feature:592360-592505:-1:exon
so has part: feature:590573-590765:-1:exon
so has part: feature:586279-586366:-1:exon
so has part: feature:584320-584529:-1:exon
so has part: feature:583078-583259:-1:exon
so has part: feature:582816-582991:-1:exon
so has part: feature:582539-582662:-1:exon
so has part: feature:581701-581862:-1:exon
so has part: feature:581299-581436:-1:exon
so has part: feature:581074-581220:-1:exon
so has part: feature:580036-580215:-1:exon
so has part: feature:579866-579949:-1:exon
so has part: feature:577709-577844:-1:exon
so has part: feature:574337-574431:-1:exon
so has part: feature:568665-573450:-1:exon
so has part: feature:568033-568110:-1:exon
so has part: feature:565644-565814:-1:exon
so has part: feature:565454-565548:-1:exon

XP_031296865.1
type: Protein
SIO_000068: ncbiprotein

position:565454:-1
position: 565454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605584-605655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:597638-597705:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:596247-596358:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:595347-595499:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:592832-593062:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:592360-592505:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:590573-590765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586279-586366:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:584320-584529:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583078-583259:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:582816-582991:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:582539-582662:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:581701-581862:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:581299-581436:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:581074-581220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:580036-580215:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:579866-579949:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:577709-577844:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:574337-574431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:568665-573450:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:568033-568110:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:565644-565814:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:565454-565548:-1:exon

LIMS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LIMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(613104..686776)
location: region:613104-686776:-1
so has part: feature:613104-686776:-1:exon
subclass of: SO_0000010

105099087
type: Gene
SIO_000068: ncbigene

position:613104:-1
position: 613104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686776:-1
position: 686776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:613104-686776:-1:exon

LIMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LIMS1
product: LIM zinc finger domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031441006.1
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(613104..615741,617666..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,686625..686776))
location: region:613104-686776:-1
so has part: feature:686625-686776:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617666-617853:-1:exon
so has part: feature:613104-615741:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:686625-686776:-1:exon

position:686625:-1
position: 686625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

position:628298:-1
position: 628298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:628457:-1
position: 628457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

position:623519:-1
position: 623519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623585:-1
position: 623585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

position:622529:-1
position: 622529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:622649:-1
position: 622649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

position:621847:-1
position: 621847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:621996:-1
position: 621996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

position:620533:-1
position: 620533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620683:-1
position: 620683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

position:620033:-1
position: 620033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620125:-1
position: 620125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

position:619220:-1
position: 619220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619268:-1
position: 619268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

position:618020:-1
position: 618020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618095:-1
position: 618095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:617666-617853:-1:exon

position:617666:-1
position: 617666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617853:-1
position: 617853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:613104-615741:-1:exon

position:615741:-1
position: 615741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LIMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LIMS1
product: LIM zinc finger domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010991873.2
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(613104..615741,617666..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,665957..666098))
location: region:613104-666098:-1
so has part: feature:665957-666098:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617666-617853:-1:exon
so has part: feature:613104-615741:-1:exon

position:666098:-1
position: 666098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:665957-666098:-1:exon

position:665957:-1
position: 665957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617666-617853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613104-615741:-1:exon

LIMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LIMS1
product: LIM zinc finger domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031441007.1
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(613104..615741,617666..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,647768..647790))
location: region:613104-647790:-1
so has part: feature:647768-647790:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617666-617853:-1:exon
so has part: feature:613104-615741:-1:exon

position:647790:-1
position: 647790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:647768-647790:-1:exon

position:647768:-1
position: 647768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617666-617853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613104-615741:-1:exon

LIMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LIMS1
product: LIM zinc finger domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010991869.2
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(613104..615741,617666..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,631630..631891))
location: region:613104-631891:-1
so has part: feature:631630-631891:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617666-617853:-1:exon
so has part: feature:613104-615741:-1:exon

position:631891:-1
position: 631891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631630-631891:-1:exon

position:631630:-1
position: 631630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617666-617853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:613104-615741:-1:exon

LIMS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LIMS1
product: LIM zinc finger domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010991870.2
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(613104..615741,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,631630..631881))
location: region:613104-631881:-1
so has part: feature:631630-631881:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:613104-615741:-1:exon

position:631881:-1
position: 631881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631630-631881:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:613104-615741:-1:exon

LIMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LIMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and senescent cell antigen-like-containing domain protein 1 isoform X2
translation: MALPAGLRPPLIPEDGEVPPAARNGVLPAPSSEDERAVSRLQRRQSDVQVYKEFCDFYAKFNMANALANASCERCRGGFAPAEKMVNSSGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYVCQKCHALIDDQPLIFKNDPFHPDHFSCASCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKNKFVEFDMKPVCKKCYEKFPLELKKRLKKLAETLGRK
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(615627..615741,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,631630..631811))
location: region:615627-631811:-1
so has part: feature:631630-631811:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:615627-615741:-1:exon

XP_010990172.1
type: Protein
SIO_000068: ncbiprotein

position:615627:-1
position: 615627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:631811:-1
position: 631811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631630-631811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:615627-615741:-1:exon

LIMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LIMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and senescent cell antigen-like-containing domain protein 1 isoform X3
translation: MLGVAAGMTNSNMANALANASCERCRGGFAPAEKMVNSSGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYVCQKCHALIDDQPLIFKNDPFHPDHFSCASCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(617706..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,686625..686656))
location: region:617706-686656:-1
so has part: feature:686625-686656:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617706-617853:-1:exon

XP_031296866.1
type: Protein
SIO_000068: ncbiprotein

position:617706:-1
position: 617706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:686656:-1
position: 686656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:686625-686656:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617706-617853:-1:exon

LIMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LIMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and senescent cell antigen-like-containing domain protein 1 isoform X1
translation: MALPAGLRPPLIPEDGEVPPAARNGVLPAPSSEDERAVSRLQRRQSDVQVYKEFCDFYAKFNMANALANASCERCRGGFAPAEKMVNSSGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYVCQKCHALIDDQPLIFKNDPFHPDHFSCASCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(617706..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628457,631630..631811))
location: region:617706-631811:-1
so has part: feature:631630-631811:-1:exon
so has part: feature:628298-628457:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617706-617853:-1:exon

XP_010990171.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:631630-631811:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:628298-628457:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:617706-617853:-1:exon

LIMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LIMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and senescent cell antigen-like-containing domain protein 1 isoform X4
translation: MANALANASCERCRGGFAPAEKMVNSSGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYVCQKCHALIDDQPLIFKNDPFHPDHFSCASCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(617706..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628453))
location: region:617706-628453:-1
so has part: feature:628298-628453:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617706-617853:-1:exon

XP_031296867.1
type: Protein
SIO_000068: ncbiprotein

position:628453:-1
position: 628453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:628298-628453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:617706-617853:-1:exon

LIMS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LIMS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM and senescent cell antigen-like-containing domain protein 1 isoform X4
translation: MANALANASCERCRGGFAPAEKMVNSSGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHLCRPCHNREKARGLGKYVCQKCHALIDDQPLIFKNDPFHPDHFSCASCGKELTADARELKGELYCLPCHDKMGVPICGACRRPIEGRVVNAMGKQWHVEHFVCAKCEKPFLGHRHYERKGLAYCETHYNQLFGDVCFHCNRVIEGDVVSALNKAWCVNCFACSTCNTKLTLKDKFVEIDLKPVCKHCYEKMPEEFKRRLAKREREAKDKDKQKKKKPVCL
SIO_010081: LIMS1
subclass of: SO_0000673
so part of: LIMS1
location: complement(join(617706..617853,618020..618095,619220..619268,620033..620125,620533..620683,621847..621996,622529..622649,623519..623585,628298..628453))
location: region:617706-628453:-1
so has part: feature:628298-628453:-1:exon
so has part: feature:623519-623585:-1:exon
so has part: feature:622529-622649:-1:exon
so has part: feature:621847-621996:-1:exon
so has part: feature:620533-620683:-1:exon
so has part: feature:620033-620125:-1:exon
so has part: feature:619220-619268:-1:exon
so has part: feature:618020-618095:-1:exon
so has part: feature:617706-617853:-1:exon

XP_010990175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:628298-628453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623519-623585:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:622529-622649:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:621847-621996:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:620533-620683:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:620033-620125:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:619220-619268:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618020-618095:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:617706-617853:-1:exon

GCC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(698860..736444)
location: region:698860-736444:-1
so has part: feature:698860-736444:-1:exon
subclass of: SO_0000010

105099088
type: Gene
SIO_000068: ncbigene

position:698860:-1
position: 698860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736444:-1
position: 736444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:698860-736444:-1:exon

GCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GCC2
product: GRIP and coiled-coil domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031441009.1
SIO_010081: GCC2
subclass of: SO_0000673
so part of: GCC2
location: complement(join(698860..700458,702623..702824,704154..704293,705258..705449,706831..707048,709362..709538,710916..711037,711776..711913,712457..712534,712631..712731,716807..716969,717719..717823,718126..718290,718747..718866,723054..723152,723248..723348,725719..725788,726491..728965,729656..729760,733946..734013,735124..735208,736167..736223,736352..736444))
location: region:698860-736444:-1
so has part: feature:736352-736444:-1:exon
so has part: feature:736167-736223:-1:exon
so has part: feature:735124-735208:-1:exon
so has part: feature:733946-734013:-1:exon
so has part: feature:729656-729760:-1:exon
so has part: feature:726491-728965:-1:exon
so has part: feature:725719-725788:-1:exon
so has part: feature:723248-723348:-1:exon
so has part: feature:723054-723152:-1:exon
so has part: feature:718747-718866:-1:exon
so has part: feature:718126-718290:-1:exon
so has part: feature:717719-717823:-1:exon
so has part: feature:716807-716969:-1:exon
so has part: feature:712631-712731:-1:exon
so has part: feature:712457-712534:-1:exon
so has part: feature:711776-711913:-1:exon
so has part: feature:710916-711037:-1:exon
so has part: feature:709362-709538:-1:exon
so has part: feature:706831-707048:-1:exon
so has part: feature:705258-705449:-1:exon
so has part: feature:704154-704293:-1:exon
so has part: feature:702623-702824:-1:exon
so has part: feature:698860-700458:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:736352-736444:-1:exon

position:736352:-1
position: 736352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:736167-736223:-1:exon

position:736167:-1
position: 736167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736223:-1
position: 736223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:735124-735208:-1:exon

position:735124:-1
position: 735124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735208:-1
position: 735208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:733946-734013:-1:exon

position:733946:-1
position: 733946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:734013:-1
position: 734013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:729656-729760:-1:exon

position:729656:-1
position: 729656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:729760:-1
position: 729760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:726491-728965:-1:exon

position:726491:-1
position: 726491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728965:-1
position: 728965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:725719-725788:-1:exon

position:725719:-1
position: 725719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725788:-1
position: 725788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:723248-723348:-1:exon

position:723248:-1
position: 723248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723348:-1
position: 723348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:723054-723152:-1:exon

position:723054:-1
position: 723054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723152:-1
position: 723152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:718747-718866:-1:exon

position:718747:-1
position: 718747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718866:-1
position: 718866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:718126-718290:-1:exon

position:718126:-1
position: 718126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718290:-1
position: 718290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:717719-717823:-1:exon

position:717719:-1
position: 717719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:717823:-1
position: 717823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:716807-716969:-1:exon

position:716807:-1
position: 716807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716969:-1
position: 716969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:712631-712731:-1:exon

position:712631:-1
position: 712631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712731:-1
position: 712731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:712457-712534:-1:exon

position:712457:-1
position: 712457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712534:-1
position: 712534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:711776-711913:-1:exon

position:711776:-1
position: 711776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711913:-1
position: 711913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:710916-711037:-1:exon

position:710916:-1
position: 710916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711037:-1
position: 711037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:709362-709538:-1:exon

position:709362:-1
position: 709362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709538:-1
position: 709538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:706831-707048:-1:exon

position:706831:-1
position: 706831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:707048:-1
position: 707048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:705258-705449:-1:exon

position:705258:-1
position: 705258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:705449:-1
position: 705449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:704154-704293:-1:exon

position:704154:-1
position: 704154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:704293:-1
position: 704293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:702623-702824:-1:exon

position:702623:-1
position: 702623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702824:-1
position: 702824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:698860-700458:-1:exon

position:700458:-1
position: 700458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GCC2
product: GRIP and coiled-coil domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031441010.1
SIO_010081: GCC2
subclass of: SO_0000673
so part of: GCC2
location: complement(join(698860..700458,702623..702824,704154..704293,705258..705449,706831..707048,709362..709538,710916..711037,711776..711913,712457..712534,712631..712731,716807..716969,717719..717823,718126..718290,718747..718866,723054..723152,723248..723348,725719..725788,726491..728965,729656..729760,733946..734013,735124..735208,735418..736142))
location: region:698860-736142:-1
so has part: feature:735418-736142:-1:exon
so has part: feature:735124-735208:-1:exon
so has part: feature:733946-734013:-1:exon
so has part: feature:729656-729760:-1:exon
so has part: feature:726491-728965:-1:exon
so has part: feature:725719-725788:-1:exon
so has part: feature:723248-723348:-1:exon
so has part: feature:723054-723152:-1:exon
so has part: feature:718747-718866:-1:exon
so has part: feature:718126-718290:-1:exon
so has part: feature:717719-717823:-1:exon
so has part: feature:716807-716969:-1:exon
so has part: feature:712631-712731:-1:exon
so has part: feature:712457-712534:-1:exon
so has part: feature:711776-711913:-1:exon
so has part: feature:710916-711037:-1:exon
so has part: feature:709362-709538:-1:exon
so has part: feature:706831-707048:-1:exon
so has part: feature:705258-705449:-1:exon
so has part: feature:704154-704293:-1:exon
so has part: feature:702623-702824:-1:exon
so has part: feature:698860-700458:-1:exon

position:736142:-1
position: 736142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735418-736142:-1:exon

position:735418:-1
position: 735418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:735124-735208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:733946-734013:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:729656-729760:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:726491-728965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:725719-725788:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723248-723348:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723054-723152:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718747-718866:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718126-718290:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717719-717823:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:716807-716969:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:712631-712731:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:712457-712534:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:711776-711913:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:710916-711037:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:709362-709538:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:706831-707048:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:705258-705449:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:704154-704293:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:702623-702824:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:698860-700458:-1:exon

GCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRIP and coiled-coil domain-containing protein 2 isoform X1
translation: MEDPVHDGVASPATPGTGRSKLETLPREDLIKFAKKQMMLIQKAKSRCTELEKEIEEFKSKCVAGGTDDIIKALTERLDAVLLEKAEAEQQCVSLKKENIKMKEEVENSVTKLEDVHKDFEQSQSNYVKEVENLKNELMAVHSKYSEDKASWQTELEGAVKKQLELSEQLKFQTDSEDNVKKLQEEIQKIKPAFEEQILCLQKQLEAATNEKEQEITYLKGVIEANSQQYQKDINSLQEELLRLKCTHQEEVKELMCQIEASAKEREAGVNNLNQLKENLVKQCEAGEKNIQEKYECELENIGKASDANQVTQMCSLLLQEDSFVEQEVNEKVKHLEDALRELESQHSILKDEVTYMNNLKLKLEIDAQHIKDEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELEGSNKRFCCAIEQHNKEVQSLQEQHQKEISELNETLLSGSEKEKLTLMFEIQGLKEQYENLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVNELQQKLRTAFNEKDALLETVNHLQRENEKLLSQQESVLELENTIKNLQEKNEMCLVSLNQRDTMLQECETKINYLSEEKDDFINKIRSSHEEVDNLHKECERKERLIIELRGEVEQTTQYNAELEQKVNELTGGLEETLKEKDQNNEKLEKLVAQLKSLSEDQEAMSSEVKSLYEENSRLSSEKNQLSRDLEALLSQREGDFMLKEQISELEKKLHLTVEERDNFNKLLENEQVQKLFVKTQLYGFLKQMEPKVSEESEEQDIVSVLQAVSESLAKISEEKHNLVFQCDKKVVDLEKEIKSLQEENVIQCEELRSLLRDSEQEKITLRKELEETLSEKEALQSDLLEMKNANEQTRLENQNLLIQVEEASQKLCSKNEKHNEKEKSFVEDLENLRLLLEQRESELQDVRAELTSLKDSLEKSPSVESDQPSVKEFEEKIGYLEKESKEKEEKINKLKLVAVKAKKELDSSRKEAQTLREELESIHSERDQLSASMRDLIQGAESYKNLLIEYDKQSEQLDIEKERASNSEHRVEDLTKQLRNLTFQCEKLNSDNEDLQARVETLQSNSRLLEVQILEVQKAKAIADKELEAEKLQKEQKIKEHANSVNELGELQLQLQKEKKQLQKTMQELELVRKDAQQTTLMNMEIADYERLMKELNQKLANKNSKVEDLEQEIKIQKQKQETLQEEMTSLQASVQQHEAKNNKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEVTSDKHRAHEQLKVSAEQHQRTLAAYQQRLAALQEECRAAKAEQAATTSEFESYKVRVHNVLKQQKNKSVSQTETEGAKQEREHLEMLIDQLKIRLQDTQNNLQMSVSELQTLQSEHDALLDRHNRTLQEAVAKEAELRDRLSSLQSEGSLLRSEHAQAVSQLTAQNEALGSSFREQVRHLQEEHQRTVETLQGQLARAEAQLAQHRSEPPARSTASSHQPVRSLRERSADLPVLDVQAAAREQGEGMEDTDTESTPPTGARTPFLEQLLNYPEAKLESPSWHTEFTKEELAQKLSSTTKSADHLNGLLRDSEATNAMLMEQIKLLKSEIRRLERNQEREKSAVSLEYLKNVLLRFLLLQPGSERARLLPVVGTMLQLSPEEKAQLAAAARGEEENASRASGWASYLHSWSGLR
SIO_010081: GCC2
subclass of: SO_0000673
so part of: GCC2
location: complement(join(700388..700458,702623..702824,704154..704293,705258..705449,706831..707048,709362..709538,710916..711037,711776..711913,712457..712534,712631..712731,716807..716969,717719..717823,718126..718290,718747..718866,723054..723152,723248..723348,725719..725788,726491..728965,729656..729760,733946..734013,735124..735208,736167..736223,736352..736357))
location: region:700388-736357:-1
so has part: feature:736352-736357:-1:exon
so has part: feature:736167-736223:-1:exon
so has part: feature:735124-735208:-1:exon
so has part: feature:733946-734013:-1:exon
so has part: feature:729656-729760:-1:exon
so has part: feature:726491-728965:-1:exon
so has part: feature:725719-725788:-1:exon
so has part: feature:723248-723348:-1:exon
so has part: feature:723054-723152:-1:exon
so has part: feature:718747-718866:-1:exon
so has part: feature:718126-718290:-1:exon
so has part: feature:717719-717823:-1:exon
so has part: feature:716807-716969:-1:exon
so has part: feature:712631-712731:-1:exon
so has part: feature:712457-712534:-1:exon
so has part: feature:711776-711913:-1:exon
so has part: feature:710916-711037:-1:exon
so has part: feature:709362-709538:-1:exon
so has part: feature:706831-707048:-1:exon
so has part: feature:705258-705449:-1:exon
so has part: feature:704154-704293:-1:exon
so has part: feature:702623-702824:-1:exon
so has part: feature:700388-700458:-1:exon

XP_031296869.1
type: Protein
SIO_000068: ncbiprotein

position:700388:-1
position: 700388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736357:-1
position: 736357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736352-736357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736167-736223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735124-735208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733946-734013:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729656-729760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726491-728965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725719-725788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723248-723348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:723054-723152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718747-718866:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718126-718290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:717719-717823:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:716807-716969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:712631-712731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:712457-712534:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:711776-711913:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:710916-711037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:709362-709538:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:706831-707048:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:705258-705449:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:704154-704293:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:702623-702824:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:700388-700458:-1:exon

GCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRIP and coiled-coil domain-containing protein 2 isoform X2
translation: MMLIQKAKSRCTELEKEIEEFKSKCVAGGTDDIIKALTERLDAVLLEKAEAEQQCVSLKKENIKMKEEVENSVTKLEDVHKDFEQSQSNYVKEVENLKNELMAVHSKYSEDKASWQTELEGAVKKQLELSEQLKFQTDSEDNVKKLQEEIQKIKPAFEEQILCLQKQLEAATNEKEQEITYLKGVIEANSQQYQKDINSLQEELLRLKCTHQEEVKELMCQIEASAKEREAGVNNLNQLKENLVKQCEAGEKNIQEKYECELENIGKASDANQVTQMCSLLLQEDSFVEQEVNEKVKHLEDALRELESQHSILKDEVTYMNNLKLKLEIDAQHIKDEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELEGSNKRFCCAIEQHNKEVQSLQEQHQKEISELNETLLSGSEKEKLTLMFEIQGLKEQYENLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVNELQQKLRTAFNEKDALLETVNHLQRENEKLLSQQESVLELENTIKNLQEKNEMCLVSLNQRDTMLQECETKINYLSEEKDDFINKIRSSHEEVDNLHKECERKERLIIELRGEVEQTTQYNAELEQKVNELTGGLEETLKEKDQNNEKLEKLVAQLKSLSEDQEAMSSEVKSLYEENSRLSSEKNQLSRDLEALLSQREGDFMLKEQISELEKKLHLTVEERDNFNKLLENEQVQKLFVKTQLYGFLKQMEPKVSEESEEQDIVSVLQAVSESLAKISEEKHNLVFQCDKKVVDLEKEIKSLQEENVIQCEELRSLLRDSEQEKITLRKELEETLSEKEALQSDLLEMKNANEQTRLENQNLLIQVEEASQKLCSKNEKHNEKEKSFVEDLENLRLLLEQRESELQDVRAELTSLKDSLEKSPSVESDQPSVKEFEEKIGYLEKESKEKEEKINKLKLVAVKAKKELDSSRKEAQTLREELESIHSERDQLSASMRDLIQGAESYKNLLIEYDKQSEQLDIEKERASNSEHRVEDLTKQLRNLTFQCEKLNSDNEDLQARVETLQSNSRLLEVQILEVQKAKAIADKELEAEKLQKEQKIKEHANSVNELGELQLQLQKEKKQLQKTMQELELVRKDAQQTTLMNMEIADYERLMKELNQKLANKNSKVEDLEQEIKIQKQKQETLQEEMTSLQASVQQHEAKNNKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEVTSDKHRAHEQLKVSAEQHQRTLAAYQQRLAALQEECRAAKAEQAATTSEFESYKVRVHNVLKQQKNKSVSQTETEGAKQEREHLEMLIDQLKIRLQDTQNNLQMSVSELQTLQSEHDALLDRHNRTLQEAVAKEAELRDRLSSLQSEGSLLRSEHAQAVSQLTAQNEALGSSFREQVRHLQEEHQRTVETLQGQLARAEAQLAQHRSEPPARSTASSHQPVRSLRERSADLPVLDVQAAAREQGEGMEDTDTESTPPTGARTPFLEQLLNYPEAKLESPSWHTEFTKEELAQKLSSTTKSADHLNGLLRDSEATNAMLMEQIKLLKSEIRRLERNQEREKSAVSLEYLKNVLLRFLLLQPGSERARLLPVVGTMLQLSPEEKAQLAAAARGEEENASRASGWASYLHSWSGLR
SIO_010081: GCC2
subclass of: SO_0000673
so part of: GCC2
location: complement(join(700388..700458,702623..702824,704154..704293,705258..705449,706831..707048,709362..709538,710916..711037,711776..711913,712457..712534,712631..712731,716807..716969,717719..717823,718126..718290,718747..718866,723054..723152,723248..723348,725719..725788,726491..728965,729656..729760,733946..734013,735124..735160))
location: region:700388-735160:-1
so has part: feature:735124-735160:-1:exon
so has part: feature:733946-734013:-1:exon
so has part: feature:729656-729760:-1:exon
so has part: feature:726491-728965:-1:exon
so has part: feature:725719-725788:-1:exon
so has part: feature:723248-723348:-1:exon
so has part: feature:723054-723152:-1:exon
so has part: feature:718747-718866:-1:exon
so has part: feature:718126-718290:-1:exon
so has part: feature:717719-717823:-1:exon
so has part: feature:716807-716969:-1:exon
so has part: feature:712631-712731:-1:exon
so has part: feature:712457-712534:-1:exon
so has part: feature:711776-711913:-1:exon
so has part: feature:710916-711037:-1:exon
so has part: feature:709362-709538:-1:exon
so has part: feature:706831-707048:-1:exon
so has part: feature:705258-705449:-1:exon
so has part: feature:704154-704293:-1:exon
so has part: feature:702623-702824:-1:exon
so has part: feature:700388-700458:-1:exon

XP_031296870.1
type: Protein
SIO_000068: ncbiprotein

position:735160:-1
position: 735160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735124-735160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:733946-734013:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:729656-729760:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:726491-728965:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:725719-725788:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:723248-723348:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:723054-723152:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:718747-718866:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:718126-718290:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:717719-717823:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:716807-716969:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:712631-712731:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:712457-712534:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:711776-711913:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:710916-711037:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:709362-709538:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:706831-707048:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:705258-705449:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:704154-704293:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:702623-702824:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:700388-700458:-1:exon

GCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GCC2
product: GRIP and coiled-coil domain containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031441011.1
SIO_010081: GCC2
subclass of: SO_0000673
so part of: GCC2
location: complement(join(705314..705449,706736..707048,709362..709538,710916..711037,711776..711913,712457..712534,712631..712731,716807..716969,717719..717823,718126..718290,718747..718866,723054..723152,723248..723348,725719..725788,726491..728965,729656..729760,733946..734013,735124..735208,736167..736223,736352..736444))
location: region:705314-736444:-1
so has part: feature:736352-736444:-1:exon
so has part: feature:736167-736223:-1:exon
so has part: feature:735124-735208:-1:exon
so has part: feature:733946-734013:-1:exon
so has part: feature:729656-729760:-1:exon
so has part: feature:726491-728965:-1:exon
so has part: feature:725719-725788:-1:exon
so has part: feature:723248-723348:-1:exon
so has part: feature:723054-723152:-1:exon
so has part: feature:718747-718866:-1:exon
so has part: feature:718126-718290:-1:exon
so has part: feature:717719-717823:-1:exon
so has part: feature:716807-716969:-1:exon
so has part: feature:712631-712731:-1:exon
so has part: feature:712457-712534:-1:exon
so has part: feature:711776-711913:-1:exon
so has part: feature:710916-711037:-1:exon
so has part: feature:709362-709538:-1:exon
so has part: feature:706736-707048:-1:exon
so has part: feature:705314-705449:-1:exon

position:705314:-1
position: 705314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736352-736444:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736167-736223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735124-735208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733946-734013:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729656-729760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726491-728965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725719-725788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723248-723348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:723054-723152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718747-718866:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718126-718290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:717719-717823:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:716807-716969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:712631-712731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:712457-712534:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:711776-711913:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:710916-711037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:709362-709538:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:706736-707048:-1:exon

position:706736:-1
position: 706736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:705314-705449:-1:exon

GCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GRIP and coiled-coil domain-containing protein 2 isoform X3
translation: MEDPVHDGVASPATPGTGRSKLETLPREDLIKFAKKQMMLIQKAKSRCTELEKEIEEFKSKCVAGGTDDIIKALTERLDAVLLEKAEAEQQCVSLKKENIKMKEEVENSVTKLEDVHKDFEQSQSNYVKEVENLKNELMAVHSKYSEDKASWQTELEGAVKKQLELSEQLKFQTDSEDNVKKLQEEIQKIKPAFEEQILCLQKQLEAATNEKEQEITYLKGVIEANSQQYQKDINSLQEELLRLKCTHQEEVKELMCQIEASAKEREAGVNNLNQLKENLVKQCEAGEKNIQEKYECELENIGKASDANQVTQMCSLLLQEDSFVEQEVNEKVKHLEDALRELESQHSILKDEVTYMNNLKLKLEIDAQHIKDEFFHEREDLEFKINELLLAKEEQGCVIEKLKSELEGSNKRFCCAIEQHNKEVQSLQEQHQKEISELNETLLSGSEKEKLTLMFEIQGLKEQYENLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFESMKQQQASDVNELQQKLRTAFNEKDALLETVNHLQRENEKLLSQQESVLELENTIKNLQEKNEMCLVSLNQRDTMLQECETKINYLSEEKDDFINKIRSSHEEVDNLHKECERKERLIIELRGEVEQTTQYNAELEQKVNELTGGLEETLKEKDQNNEKLEKLVAQLKSLSEDQEAMSSEVKSLYEENSRLSSEKNQLSRDLEALLSQREGDFMLKEQISELEKKLHLTVEERDNFNKLLENEQVQKLFVKTQLYGFLKQMEPKVSEESEEQDIVSVLQAVSESLAKISEEKHNLVFQCDKKVVDLEKEIKSLQEENVIQCEELRSLLRDSEQEKITLRKELEETLSEKEALQSDLLEMKNANEQTRLENQNLLIQVEEASQKLCSKNEKHNEKEKSFVEDLENLRLLLEQRESELQDVRAELTSLKDSLEKSPSVESDQPSVKEFEEKIGYLEKESKEKEEKINKLKLVAVKAKKELDSSRKEAQTLREELESIHSERDQLSASMRDLIQGAESYKNLLIEYDKQSEQLDIEKERASNSEHRVEDLTKQLRNLTFQCEKLNSDNEDLQARVETLQSNSRLLEVQILEVQKAKAIADKELEAEKLQKEQKIKEHANSVNELGELQLQLQKEKKQLQKTMQELELVRKDAQQTTLMNMEIADYERLMKELNQKLANKNSKVEDLEQEIKIQKQKQETLQEEMTSLQASVQQHEAKNNKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEVTSDKHRAHEQLKVSAEQHQRTLAAYQQRLAALQEECRAAKAEQAATTSEFESYKVRVHNVLKQQKNKSVSQTETEGAKQEREHLEMLIDQLKIRLQDTQNNLQMSVSELQTLQSEHDALLDRHNRTLQEAVAKEAELRDRLSSLQSEGSLLRSEHAQAVSQLTAQNEALGSSFREQVRHLQEEHQRTVETLQGQLARAEAQLAQHRSEPPARSAYVPRALLSLSRVSAALSTLSGPQRK
SIO_010081: GCC2
subclass of: SO_0000673
so part of: GCC2
location: complement(join(706748..707048,709362..709538,710916..711037,711776..711913,712457..712534,712631..712731,716807..716969,717719..717823,718126..718290,718747..718866,723054..723152,723248..723348,725719..725788,726491..728965,729656..729760,733946..734013,735124..735208,736167..736223,736352..736357))
location: region:706748-736357:-1
so has part: feature:736352-736357:-1:exon
so has part: feature:736167-736223:-1:exon
so has part: feature:735124-735208:-1:exon
so has part: feature:733946-734013:-1:exon
so has part: feature:729656-729760:-1:exon
so has part: feature:726491-728965:-1:exon
so has part: feature:725719-725788:-1:exon
so has part: feature:723248-723348:-1:exon
so has part: feature:723054-723152:-1:exon
so has part: feature:718747-718866:-1:exon
so has part: feature:718126-718290:-1:exon
so has part: feature:717719-717823:-1:exon
so has part: feature:716807-716969:-1:exon
so has part: feature:712631-712731:-1:exon
so has part: feature:712457-712534:-1:exon
so has part: feature:711776-711913:-1:exon
so has part: feature:710916-711037:-1:exon
so has part: feature:709362-709538:-1:exon
so has part: feature:706748-707048:-1:exon

XP_031296871.1
type: Protein
SIO_000068: ncbiprotein

position:706748:-1
position: 706748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:736352-736357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:736167-736223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:735124-735208:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:733946-734013:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:729656-729760:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:726491-728965:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:725719-725788:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:723248-723348:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:723054-723152:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:718747-718866:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:718126-718290:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:717719-717823:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:716807-716969:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:712631-712731:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:712457-712534:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:711776-711913:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:710916-711037:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:709362-709538:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:706748-707048:-1:exon

SULT1C4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SULT1C4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(738339..747476)
location: region:738339-747476:-1
so has part: feature:738339-747476:-1:exon
subclass of: SO_0000010

105099089
type: Gene
SIO_000068: ncbigene

position:738339:-1
position: 738339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747476:-1
position: 747476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:738339-747476:-1:exon

SULT1C4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SULT1C4
product: sulfotransferase family 1C member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 51 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010991875.2
SIO_010081: SULT1C4
subclass of: SO_0000673
so part of: SULT1C4
location: complement(join(738339..739271,740187..740367,742946..743040,743230..743356,743631..743728,744778..744903,747193..747476))
location: region:738339-747476:-1
so has part: feature:747193-747476:-1:exon
so has part: feature:744778-744903:-1:exon
so has part: feature:743631-743728:-1:exon
so has part: feature:743230-743356:-1:exon
so has part: feature:742946-743040:-1:exon
so has part: feature:740187-740367:-1:exon
so has part: feature:738339-739271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:747193-747476:-1:exon

position:747193:-1
position: 747193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:744778-744903:-1:exon

position:744778:-1
position: 744778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744903:-1
position: 744903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:743631-743728:-1:exon

position:743631:-1
position: 743631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743728:-1
position: 743728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:743230-743356:-1:exon

position:743230:-1
position: 743230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743356:-1
position: 743356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:742946-743040:-1:exon

position:742946:-1
position: 742946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743040:-1
position: 743040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:740187-740367:-1:exon

position:740187:-1
position: 740187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740367:-1
position: 740367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:738339-739271:-1:exon

position:739271:-1
position: 739271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SULT1C4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SULT1C4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 1C4
translation: MEDLTWGWAERLAVDCVQGILQPTPTCDTWEQIWNFQARPDDLLISTYPKAGTTWTQEIVDLIQNECDVGRSQRAPTHERFPFIEWKIPTMESGLEQANAMPSPRTLKTHLPIQLLPPSLLEKNCKMIYIARNPKDNMVSYYHFHRMNKALPAPGTWEEYFENFLTGKVCWGSWYDHVKGWWDARHQHRILYLFYEDMKRNPKHEIQKLAEFIGKSLDNKVLDKIVHHTSFDVMKQNPMANYSSVPTEIMNQSISPFMRKGTVGDWKNHFTVAQNERFEDDYRKRMADSSLASRFHFS
SIO_010081: SULT1C4
subclass of: SO_0000673
so part of: SULT1C4
location: complement(join(739156..739271,740187..740367,742946..743040,743230..743356,743631..743728,744778..744903,747193..747346))
location: region:739156-747346:-1
so has part: feature:747193-747346:-1:exon
so has part: feature:744778-744903:-1:exon
so has part: feature:743631-743728:-1:exon
so has part: feature:743230-743356:-1:exon
so has part: feature:742946-743040:-1:exon
so has part: feature:740187-740367:-1:exon
so has part: feature:739156-739271:-1:exon

XP_010990177.2
type: Protein
SIO_000068: ncbiprotein

position:739156:-1
position: 739156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747346:-1
position: 747346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:747193-747346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:744778-744903:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:743631-743728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:743230-743356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742946-743040:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:740187-740367:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739156-739271:-1:exon

LOC105106773
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105106773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(751030..755172)
location: region:751030-755172:-1
so has part: feature:751030-755172:-1:exon
subclass of: SO_0000011

105106773
type: Gene
SIO_000068: ncbigene

position:751030:-1
position: 751030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755172:-1
position: 755172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751030-755172:-1:exon

LOC105106773
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105106773
product: uncharacterized LOC105106773, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004133097.1
SIO_010081: LOC105106773
subclass of: SO_0000673
so part of: LOC105106773
location: complement(join(751030..751470,753314..753508,754769..754942,755038..755172))
location: region:751030-755172:-1
so has part: feature:755038-755172:-1:exon
so has part: feature:754769-754942:-1:exon
so has part: feature:753314-753508:-1:exon
so has part: feature:751030-751470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755038-755172:-1:exon

position:755038:-1
position: 755038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:754769-754942:-1:exon

position:754769:-1
position: 754769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754942:-1
position: 754942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:753314-753508:-1:exon

position:753314:-1
position: 753314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753508:-1
position: 753508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:751030-751470:-1:exon

position:751470:-1
position: 751470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105106773
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105106773
product: uncharacterized LOC105106773, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004133096.1
SIO_010081: LOC105106773
subclass of: SO_0000673
so part of: LOC105106773
location: complement(join(751030..751470,753314..753508,754769..755172))
location: region:751030-755172:-1
so has part: feature:754769-755172:-1:exon
so has part: feature:753314-753508:-1:exon
so has part: feature:751030-751470:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:754769-755172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:753314-753508:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751030-751470:-1:exon

LOC105099090
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105099090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(758015..768786)
location: region:758015-768786:-1
so has part: feature:758015-768786:-1:exon
subclass of: SO_0000010

105099090
type: Gene
SIO_000068: ncbigene

position:758015:-1
position: 758015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768786:-1
position: 768786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758015-768786:-1:exon

LOC105099090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105099090
product: sulfotransferase 1C2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010991877.2
SIO_010081: LOC105099090
subclass of: SO_0000673
so part of: LOC105099090
location: complement(join(758015..758352,759340..759520,759637..759773,760191..760317,761530..761627,762398..762523,762888..763065,768440..768786))
location: region:758015-768786:-1
so has part: feature:768440-768786:-1:exon
so has part: feature:762888-763065:-1:exon
so has part: feature:762398-762523:-1:exon
so has part: feature:761530-761627:-1:exon
so has part: feature:760191-760317:-1:exon
so has part: feature:759637-759773:-1:exon
so has part: feature:759340-759520:-1:exon
so has part: feature:758015-758352:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:768440-768786:-1:exon

position:768440:-1
position: 768440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:762888-763065:-1:exon

position:762888:-1
position: 762888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763065:-1
position: 763065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762398-762523:-1:exon

position:762398:-1
position: 762398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762523:-1
position: 762523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:761530-761627:-1:exon

position:761530:-1
position: 761530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761627:-1
position: 761627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:760191-760317:-1:exon

position:760191:-1
position: 760191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760317:-1
position: 760317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:759637-759773:-1:exon

position:759637:-1
position: 759637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759773:-1
position: 759773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:759340-759520:-1:exon

position:759340:-1
position: 759340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759520:-1
position: 759520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:758015-758352:-1:exon

position:758352:-1
position: 758352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105099090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105099090
product: sulfotransferase 1C2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031441012.1
SIO_010081: LOC105099090
subclass of: SO_0000673
so part of: LOC105099090
location: complement(join(758015..758352,759340..759520,759637..759773,760191..760317,761530..761627,762398..762523,762888..763065,766811..767264,768440..768786))
location: region:758015-768786:-1
so has part: feature:768440-768786:-1:exon
so has part: feature:766811-767264:-1:exon
so has part: feature:762888-763065:-1:exon
so has part: feature:762398-762523:-1:exon
so has part: feature:761530-761627:-1:exon
so has part: feature:760191-760317:-1:exon
so has part: feature:759637-759773:-1:exon
so has part: feature:759340-759520:-1:exon
so has part: feature:758015-758352:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:768440-768786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766811-767264:-1:exon

position:766811:-1
position: 766811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767264:-1
position: 767264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:762888-763065:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762398-762523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761530-761627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760191-760317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759637-759773:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759340-759520:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758015-758352:-1:exon

LOC105099090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105099090
product: sulfotransferase 1C2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010991878.2
SIO_010081: LOC105099090
subclass of: SO_0000673
so part of: LOC105099090
location: complement(join(758015..758352,759340..759520,759679..759773,760191..760317,761530..761627,762398..762523,762888..763065,766811..767264,768440..768780))
location: region:758015-768780:-1
so has part: feature:768440-768780:-1:exon
so has part: feature:766811-767264:-1:exon
so has part: feature:762888-763065:-1:exon
so has part: feature:762398-762523:-1:exon
so has part: feature:761530-761627:-1:exon
so has part: feature:760191-760317:-1:exon
so has part: feature:759679-759773:-1:exon
so has part: feature:759340-759520:-1:exon
so has part: feature:758015-758352:-1:exon

position:768780:-1
position: 768780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768440-768780:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:766811-767264:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:762888-763065:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:762398-762523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:761530-761627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:760191-760317:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759679-759773:-1:exon

position:759679:-1
position: 759679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:759340-759520:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:758015-758352:-1:exon

LOC105099090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105099090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 1C2 isoform X2
translation: MALTTEVGRWPPLSELEGVPLPAATVDNWGQIQGFEAKPDDLVICTYPKSGTTWIQEIVDMIEQNGDVEKCQRATIQHRHPFLEWARPPQPSGVEQAREMPSPRVLRTHLPTQLLPRSFWETRCKFLYVARNAKDCTVSYYHFQRMNQTLPDPGPWEEYLETFLSGKVGWGSWFEHVKGWWEVRHRYQILFLFYEDLKRDPKREIQKVVQFLGKRVDGPVLDRIVQETSFEKMKANPMTNRSLVPKSILDQSISPFMRKGTVGDWKNHFTVAQNERFEEIYRRKMEGTSICFCTEL
SIO_010081: LOC105099090
subclass of: SO_0000673
so part of: LOC105099090
location: complement(join(758240..758352,759340..759520,759679..759773,760191..760317,761530..761627,762398..762523,762888..763038))
location: region:758240-763038:-1
so has part: feature:762888-763038:-1:exon
so has part: feature:762398-762523:-1:exon
so has part: feature:761530-761627:-1:exon
so has part: feature:760191-760317:-1:exon
so has part: feature:759679-759773:-1:exon
so has part: feature:759340-759520:-1:exon
so has part: feature:758240-758352:-1:exon

XP_010990180.2
type: Protein
SIO_000068: ncbiprotein

position:758240:-1
position: 758240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:763038:-1
position: 763038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762888-763038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762398-762523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761530-761627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760191-760317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:759679-759773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759340-759520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758240-758352:-1:exon

LOC105099090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105099090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 1C2 isoform X1
translation: MALTTEVGRWPPLSELEGVPLPAATVDNWGQIQGFEAKPDDLVICTYPKSGTTWIQEIVDMIEQNGDVEKCQRATIQHRHPFLEWARPPQPSGVEQAREMPSPRVLRTHLPTQLLPRSFWETRCKFLYVARNAKDCTVSYYHFQRMNQTLPDPGPWEEYLETFLSGKVGWGSWFEHVKGWWEVRHRYQILFLFYEDLKRVSQGHSGKEPLQTQDPKREIQKVVQFLGKRVDGPVLDRIVQETSFEKMKANPMTNRSLVPKSILDQSISPFMRKGTVGDWKNHFTVAQNERFEEIYRRKMEGTSICFCTEL
SIO_010081: LOC105099090
subclass of: SO_0000673
so part of: LOC105099090
location: complement(join(758240..758352,759340..759520,759637..759773,760191..760317,761530..761627,762398..762523,762888..763038))
location: region:758240-763038:-1
so has part: feature:762888-763038:-1:exon
so has part: feature:762398-762523:-1:exon
so has part: feature:761530-761627:-1:exon
so has part: feature:760191-760317:-1:exon
so has part: feature:759637-759773:-1:exon
so has part: feature:759340-759520:-1:exon
so has part: feature:758240-758352:-1:exon

XP_031296872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:762888-763038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762398-762523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761530-761627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760191-760317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:759637-759773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759340-759520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758240-758352:-1:exon

LOC105099090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105099090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 1C2 isoform X1
translation: MALTTEVGRWPPLSELEGVPLPAATVDNWGQIQGFEAKPDDLVICTYPKSGTTWIQEIVDMIEQNGDVEKCQRATIQHRHPFLEWARPPQPSGVEQAREMPSPRVLRTHLPTQLLPRSFWETRCKFLYVARNAKDCTVSYYHFQRMNQTLPDPGPWEEYLETFLSGKVGWGSWFEHVKGWWEVRHRYQILFLFYEDLKRVSQGHSGKEPLQTQDPKREIQKVVQFLGKRVDGPVLDRIVQETSFEKMKANPMTNRSLVPKSILDQSISPFMRKGTVGDWKNHFTVAQNERFEEIYRRKMEGTSICFCTEL
SIO_010081: LOC105099090
subclass of: SO_0000673
so part of: LOC105099090
location: complement(join(758240..758352,759340..759520,759637..759773,760191..760317,761530..761627,762398..762523,762888..763038))
location: region:758240-763038:-1
so has part: feature:762888-763038:-1:exon
so has part: feature:762398-762523:-1:exon
so has part: feature:761530-761627:-1:exon
so has part: feature:760191-760317:-1:exon
so has part: feature:759637-759773:-1:exon
so has part: feature:759340-759520:-1:exon
so has part: feature:758240-758352:-1:exon

XP_010990179.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:762888-763038:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:762398-762523:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761530-761627:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760191-760317:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:759637-759773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759340-759520:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:758240-758352:-1:exon

LOC105099091
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105099091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(770745..781807)
location: region:770745-781807:-1
so has part: feature:770745-781807:-1:exon
subclass of: SO_0000010

105099091
type: Gene
SIO_000068: ncbigene

position:770745:-1
position: 770745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781807:-1
position: 781807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770745-781807:-1:exon

LOC105099091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105099091
product: sulfotransferase 1C1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010991879.2
SIO_010081: LOC105099091
subclass of: SO_0000673
so part of: LOC105099091
location: complement(join(770745..772246,772434..772614,773009..773103,773947..774073,776742..776839,778410..778538,779175..779374,781662..781807))
location: region:770745-781807:-1
so has part: feature:781662-781807:-1:exon
so has part: feature:779175-779374:-1:exon
so has part: feature:778410-778538:-1:exon
so has part: feature:776742-776839:-1:exon
so has part: feature:773947-774073:-1:exon
so has part: feature:773009-773103:-1:exon
so has part: feature:772434-772614:-1:exon
so has part: feature:770745-772246:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:781662-781807:-1:exon

position:781662:-1
position: 781662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779175-779374:-1:exon

position:779175:-1
position: 779175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779374:-1
position: 779374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:778410-778538:-1:exon

position:778410:-1
position: 778410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778538:-1
position: 778538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:776742-776839:-1:exon

position:776742:-1
position: 776742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776839:-1
position: 776839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:773947-774073:-1:exon

position:773947:-1
position: 773947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774073:-1
position: 774073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:773009-773103:-1:exon

position:773009:-1
position: 773009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:773103:-1
position: 773103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:772434-772614:-1:exon

position:772434:-1
position: 772434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772614:-1
position: 772614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:770745-772246:-1:exon

position:772246:-1
position: 772246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105099091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105099091
product: sulfotransferase 1C1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 48 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031441013.1
SIO_010081: LOC105099091
subclass of: SO_0000673
so part of: LOC105099091
location: complement(join(772106..772246,772434..772614,773009..773103,773947..774073,776742..776839,778410..778538,779175..779374,781637..781778))
location: region:772106-781778:-1
so has part: feature:781637-781778:-1:exon
so has part: feature:779175-779374:-1:exon
so has part: feature:778410-778538:-1:exon
so has part: feature:776742-776839:-1:exon
so has part: feature:773947-774073:-1:exon
so has part: feature:773009-773103:-1:exon
so has part: feature:772434-772614:-1:exon
so has part: feature:772106-772246:-1:exon

position:772106:-1
position: 772106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:781778:-1
position: 781778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781637-781778:-1:exon

position:781637:-1
position: 781637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:779175-779374:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:778410-778538:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:776742-776839:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773947-774073:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:773009-773103:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772434-772614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:772106-772246:-1:exon

LOC105099091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105099091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 1C1
translation: MSLEEMKDLCVDEKCLRPETSEVGGILMTKLMSDNWDKIWNFQARPDDLLIATYVKSGTTWTQEIVDMIQNDGDSQKCQRASTFNRQPFIEWALPPLIKSGLDLANKMPSPRTLKTHLPVQMLPPSFWKENSKIIYVARNAKDCLVSYYHFSRMNKLMPDPGSWEEYVEMFKAGKVLWGSWYNHVKGWWDAKDRHRILYLFYEDMKEDPKREIQKILKFLEKDVSEDILNKIIHHTSFDMMRQNPMANYTSLPSSIMDHSISPFMRRGMPGDWKNYFTVAQNEAFEADYAQKMAGSSLTFRTEI
SIO_010081: LOC105099091
subclass of: SO_0000673
so part of: LOC105099091
location: complement(join(772134..772246,772434..772614,773009..773103,773947..774073,776742..776839,778410..778538,779175..779346))
location: region:772134-779346:-1
so has part: feature:779175-779346:-1:exon
so has part: feature:778410-778538:-1:exon
so has part: feature:776742-776839:-1:exon
so has part: feature:773947-774073:-1:exon
so has part: feature:773009-773103:-1:exon
so has part: feature:772434-772614:-1:exon
so has part: feature:772134-772246:-1:exon

XP_031296873.1
type: Protein
SIO_000068: ncbiprotein

position:772134:-1
position: 772134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779346:-1
position: 779346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779175-779346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778410-778538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776742-776839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773947-774073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773009-773103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772434-772614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772134-772246:-1:exon

LOC105099091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105099091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sulfotransferase 1C1
translation: MSLEEMKDLCVDEKCLRPETSEVGGILMTKLMSDNWDKIWNFQARPDDLLIATYVKSGTTWTQEIVDMIQNDGDSQKCQRASTFNRQPFIEWALPPLIKSGLDLANKMPSPRTLKTHLPVQMLPPSFWKENSKIIYVARNAKDCLVSYYHFSRMNKLMPDPGSWEEYVEMFKAGKVLWGSWYNHVKGWWDAKDRHRILYLFYEDMKEDPKREIQKILKFLEKDVSEDILNKIIHHTSFDMMRQNPMANYTSLPSSIMDHSISPFMRRGMPGDWKNYFTVAQNEAFEADYAQKMAGSSLTFRTEI
SIO_010081: LOC105099091
subclass of: SO_0000673
so part of: LOC105099091
location: complement(join(772134..772246,772434..772614,773009..773103,773947..774073,776742..776839,778410..778538,779175..779346))
location: region:772134-779346:-1
so has part: feature:779175-779346:-1:exon
so has part: feature:778410-778538:-1:exon
so has part: feature:776742-776839:-1:exon
so has part: feature:773947-774073:-1:exon
so has part: feature:773009-773103:-1:exon
so has part: feature:772434-772614:-1:exon
so has part: feature:772134-772246:-1:exon

XP_010990181.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:779175-779346:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:778410-778538:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:776742-776839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:773947-774073:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:773009-773103:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:772434-772614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:772134-772246:-1:exon

LOC116149511
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149511
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 781704..814544
location: region:781704-814544:1
so has part: feature:781704-814544:1:exon
subclass of: SO_0000011

116149511
type: Gene
SIO_000068: ncbigene

position:781704:1
position: 781704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814544:1
position: 814544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781704-814544:1:exon

LOC116149511
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149511
product: uncharacterized LOC116149511, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133098.1
SIO_010081: LOC116149511
subclass of: SO_0000673
so part of: LOC116149511
location: join(781704..781813,799472..799520,803265..804079,814280..814544)
location: region:781704-814544:1
so has part: feature:781704-781813:1:exon
so has part: feature:799472-799520:1:exon
so has part: feature:803265-804079:1:exon
so has part: feature:814280-814544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:781704-781813:1:exon

position:781813:1
position: 781813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:799472-799520:1:exon

position:799472:1
position: 799472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:799520:1
position: 799520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:803265-804079:1:exon

position:803265:1
position: 803265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804079:1
position: 804079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:814280-814544:1:exon

position:814280:1
position: 814280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149511
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149511
product: uncharacterized LOC116149511, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004133099.1
SIO_010081: LOC116149511
subclass of: SO_0000673
so part of: LOC116149511
location: join(781704..781813,799472..799520,814280..814544)
location: region:781704-814544:1
so has part: feature:781704-781813:1:exon
so has part: feature:799472-799520:1:exon
so has part: feature:814280-814544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:781704-781813:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799472-799520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:814280-814544:1:exon

SLC5A7
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SLC5A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(849093..870698)
location: region:849093-870698:-1
so has part: feature:849093-870698:-1:exon
subclass of: SO_0000010

105099138
type: Gene
SIO_000068: ncbigene

position:849093:-1
position: 849093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:870698:-1
position: 870698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:849093-870698:-1:exon

SLC5A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC5A7
product: solute carrier family 5 member 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031441014.1
SIO_010081: SLC5A7
subclass of: SO_0000673
so part of: SLC5A7
location: complement(join(849093..853030,853959..854176,856154..856307,857895..858038,859482..859630,863384..863539,864291..864404,868903..869131,870335..870698))
location: region:849093-870698:-1
so has part: feature:870335-870698:-1:exon
so has part: feature:868903-869131:-1:exon
so has part: feature:864291-864404:-1:exon
so has part: feature:863384-863539:-1:exon
so has part: feature:859482-859630:-1:exon
so has part: feature:857895-858038:-1:exon
so has part: feature:856154-856307:-1:exon
so has part: feature:853959-854176:-1:exon
so has part: feature:849093-853030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:870335-870698:-1:exon

position:870335:-1
position: 870335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868903-869131:-1:exon

position:868903:-1
position: 868903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869131:-1
position: 869131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:864291-864404:-1:exon

position:864291:-1
position: 864291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:864404:-1
position: 864404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:863384-863539:-1:exon

position:863384:-1
position: 863384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:863539:-1
position: 863539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:859482-859630:-1:exon

position:859482:-1
position: 859482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859630:-1
position: 859630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:857895-858038:-1:exon

position:857895:-1
position: 857895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:858038:-1
position: 858038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:856154-856307:-1:exon

position:856154:-1
position: 856154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:856307:-1
position: 856307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:853959-854176:-1:exon

position:853959:-1
position: 853959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:854176:-1
position: 854176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:849093-853030:-1:exon

position:853030:-1
position: 853030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC5A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC5A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: high affinity choline transporter 1
translation: MALQVEGLIAIVVFYLLILLVGIWAAWRTKHSGSSEERSEAIIVGGRDIGLLVGGFTMTATWVGGGYINGTAEAVYVPGYGLAWAQAPIGYSLSLILGGLFFAKPMRSKGYVTMLDPFQQIYGKRMGGLLFIPALMGEMFWAAAIFSALGATISVVIHADVHWSVIVSALIATLYTLVGGLYSVAYTDVVQLFCIFVGLWVSVPFALSNSAVTDIGFTAVHTKYQKPWLGTVEPSEVYTWLDSFLLLMLGGIPWQAYFQRVLSSSSATYAQVLSFLAAFGCMVMALPAVLIGAIGASTNWNQTSYGTKDPKENQQADMILPIVLKHLCPVYVSYFGLGAVSAAVMSSADSSILSASSMFARNIYQLSFRQNASDKEIVWVMRITVFVFGASATAMALLTKTVYGLWYLSSDLVYIVIFPQLLCVLFVKGTNTYGAAAGYMSGLFLRVTGGEPYLNLQPWIFYPGYYMDRSGIYNQRFPFKTLAMATSFLSNICFSYLAKYLFESGTLPPKLDVFDAVVARHSEENMDKTILVKNENIKLDELAPVKPRQSVTLSSTFTNREAFLEVDSSPEGSGTEDSL
SIO_010081: SLC5A7
subclass of: SO_0000673
so part of: SLC5A7
location: complement(join(852404..853030,853959..854176,856154..856307,857895..858038,859482..859630,863384..863539,864291..864404,868903..869080))
location: region:852404-869080:-1
so has part: feature:868903-869080:-1:exon
so has part: feature:864291-864404:-1:exon
so has part: feature:863384-863539:-1:exon
so has part: feature:859482-859630:-1:exon
so has part: feature:857895-858038:-1:exon
so has part: feature:856154-856307:-1:exon
so has part: feature:853959-854176:-1:exon
so has part: feature:852404-853030:-1:exon

XP_031296874.1
type: Protein
SIO_000068: ncbiprotein

position:852404:-1
position: 852404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869080:-1
position: 869080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868903-869080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:864291-864404:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:863384-863539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859482-859630:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:857895-858038:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:856154-856307:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:853959-854176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:852404-853030:-1:exon

LOC116149578
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149578
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(907737..907869)
location: region:907737-907869:-1
so has part: feature:907737-907869:-1:exon
subclass of: SO_0000578

116149578
type: Gene
SIO_000068: ncbigene

position:907737:-1
position: 907737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:907869:-1
position: 907869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:907737-907869:-1:exon

LOC116149578
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116149578
product: small nucleolar RNA SNORA11
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00614
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004133198.1
SIO_010081: LOC116149578
subclass of: SO_0000673
so part of: LOC116149578
location: complement(907737..907869)
location: region:907737-907869:-1
so has part: feature:907737-907869:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:907737-907869:-1:exon

LOC116149577
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149577
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(939279..939409)
location: region:939279-939409:-1
so has part: feature:939279-939409:-1:exon
subclass of: SO_0000578

116149577
type: Gene
SIO_000068: ncbigene

position:939279:-1
position: 939279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:939409:-1
position: 939409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:939279-939409:-1:exon

LOC116149577
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116149577
product: small nucleolar RNA SNORA11
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00614
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004133197.1
SIO_010081: LOC116149577
subclass of: SO_0000673
so part of: LOC116149577
location: complement(939279..939409)
location: region:939279-939409:-1
so has part: feature:939279-939409:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:939279-939409:-1:exon

LOC116149500
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149500
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(980588..985067)
location: region:980588-985067:-1
so has part: feature:980588-985067:-1:exon
subclass of: SO_0000011

116149500
type: Gene
SIO_000068: ncbigene

position:980588:-1
position: 980588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985067:-1
position: 985067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:980588-985067:-1:exon

LOC116149500
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149500
product: uncharacterized LOC116149500
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004133085.1
SIO_010081: LOC116149500
subclass of: SO_0000673
so part of: LOC116149500
location: complement(join(980588..981254,982529..982653,984648..985067))
location: region:980588-985067:-1
so has part: feature:984648-985067:-1:exon
so has part: feature:982529-982653:-1:exon
so has part: feature:980588-981254:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:984648-985067:-1:exon

position:984648:-1
position: 984648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:982529-982653:-1:exon

position:982529:-1
position: 982529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982653:-1
position: 982653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:980588-981254:-1:exon

position:981254:-1
position: 981254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116149512
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149512
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(989677..998048)
location: region:989677-998048:-1
so has part: feature:989677-998048:-1:exon
subclass of: SO_0000011

116149512
type: Gene
SIO_000068: ncbigene

position:989677:-1
position: 989677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998048:-1
position: 998048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:989677-998048:-1:exon

LOC116149512
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149512
product: uncharacterized LOC116149512
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004133100.1
SIO_010081: LOC116149512
subclass of: SO_0000673
so part of: LOC116149512
location: complement(join(989677..991959,994959..995115,996079..996181,997685..998048))
location: region:989677-998048:-1
so has part: feature:997685-998048:-1:exon
so has part: feature:996079-996181:-1:exon
so has part: feature:994959-995115:-1:exon
so has part: feature:989677-991959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:997685-998048:-1:exon

position:997685:-1
position: 997685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:996079-996181:-1:exon

position:996079:-1
position: 996079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996181:-1
position: 996181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:994959-995115:-1:exon

position:994959:-1
position: 994959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995115:-1
position: 995115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:989677-991959:-1:exon

position:991959:-1
position: 991959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ST6GAL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ST6GAL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1212516..1264819
location: region:1212516-1264819:1
so has part: feature:1212516-1264819:1:exon
subclass of: SO_0000010

105099139
type: Gene
SIO_000068: ncbigene

position:1212516:1
position: 1212516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1264819:1
position: 1264819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212516-1264819:1:exon

ST6GAL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ST6GAL2
product: ST6 beta-galactoside alpha-2,6-sialyltransferase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031441017.1
SIO_010081: ST6GAL2
subclass of: SO_0000673
so part of: ST6GAL2
location: join(1212516..1212963,1240223..1241203,1249639..1249736,1250693..1250794,1253452..1253626,1260165..1264819)
location: region:1212516-1264819:1
so has part: feature:1212516-1212963:1:exon
so has part: feature:1240223-1241203:1:exon
so has part: feature:1249639-1249736:1:exon
so has part: feature:1250693-1250794:1:exon
so has part: feature:1253452-1253626:1:exon
so has part: feature:1260165-1264819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212516-1212963:1:exon

position:1212963:1
position: 1212963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240223-1241203:1:exon

position:1240223:1
position: 1240223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1241203:1
position: 1241203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1249639-1249736:1:exon

position:1249639:1
position: 1249639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249736:1
position: 1249736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1250693-1250794:1:exon

position:1250693:1
position: 1250693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250794:1
position: 1250794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1253452-1253626:1:exon

position:1253452:1
position: 1253452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1253626:1
position: 1253626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1260165-1264819:1:exon

position:1260165:1
position: 1260165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ST6GAL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ST6GAL2
product: ST6 beta-galactoside alpha-2,6-sialyltransferase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031441016.1
SIO_010081: ST6GAL2
subclass of: SO_0000673
so part of: ST6GAL2
location: join(1213599..1213861,1240223..1241203,1249639..1249736,1250693..1250794,1253452..1253626,1260165..1264819)
location: region:1213599-1264819:1
so has part: feature:1213599-1213861:1:exon
so has part: feature:1240223-1241203:1:exon
so has part: feature:1249639-1249736:1:exon
so has part: feature:1250693-1250794:1:exon
so has part: feature:1253452-1253626:1:exon
so has part: feature:1260165-1264819:1:exon

position:1213599:1
position: 1213599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1213599-1213861:1:exon

position:1213861:1
position: 1213861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1240223-1241203:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1249639-1249736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1250693-1250794:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1253452-1253626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1260165-1264819:1:exon

ST6GAL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ST6GAL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactoside alpha-2,6-sialyltransferase 2
translation: MKPHLKQWRQGMLCGIFAWGLLFVAIFVYFTDSNPAEPAPSSFSFLETRRLLPVQGRQRAIMGAVQEEPALPEGADAPGRLPGVPPPGPLHAGPGDLQTWAQDGLQSEEEFFSPQTGRKSQSTLPREDAAGRPGAHSRAPGTSGPLSPGDPGPPVGAEPAHQAPGRRAQRRPRRLGRSTAPEEGEDGDRLSSSMSSAFLRRLWKGDASPRMLHPRLQKAMRAYLSANKHGVRSRGRAAGGAARSCCRALRGRVRVRTLDGTEPPFSALGWRALVPAVPLGQLHPRGLRSCAVVTSAGAILNSSLGEEIDSHDAVLRFNSAPTRGYEKDVGNKTTVRIINSQILTNPSHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYVQYRRRNPDQPFYILHPKFIWQLWDIIQENTEEKIQPNPPSSGFIGILLMMTLCREVHVYEYIPSVRQTELCHYHELYRDAACTLGAYHPLLYEKLLVQRLNTGARGDLRRKGKVVLPGLRAARCPPRA
SIO_010081: ST6GAL2
subclass of: SO_0000673
so part of: ST6GAL2
location: join(1240279..1241203,1249639..1249736,1250693..1250794,1253452..1253626,1260165..1260418)
location: region:1240279-1260418:1
so has part: feature:1240279-1241203:1:exon
so has part: feature:1249639-1249736:1:exon
so has part: feature:1250693-1250794:1:exon
so has part: feature:1253452-1253626:1:exon
so has part: feature:1260165-1260418:1:exon

XP_031296876.1
type: Protein
SIO_000068: ncbiprotein

position:1240279:1
position: 1240279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1260418:1
position: 1260418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1240279-1241203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1249639-1249736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1250693-1250794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253452-1253626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260165-1260418:1:exon

ST6GAL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ST6GAL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-galactoside alpha-2,6-sialyltransferase 2
translation: MKPHLKQWRQGMLCGIFAWGLLFVAIFVYFTDSNPAEPAPSSFSFLETRRLLPVQGRQRAIMGAVQEEPALPEGADAPGRLPGVPPPGPLHAGPGDLQTWAQDGLQSEEEFFSPQTGRKSQSTLPREDAAGRPGAHSRAPGTSGPLSPGDPGPPVGAEPAHQAPGRRAQRRPRRLGRSTAPEEGEDGDRLSSSMSSAFLRRLWKGDASPRMLHPRLQKAMRAYLSANKHGVRSRGRAAGGAARSCCRALRGRVRVRTLDGTEPPFSALGWRALVPAVPLGQLHPRGLRSCAVVTSAGAILNSSLGEEIDSHDAVLRFNSAPTRGYEKDVGNKTTVRIINSQILTNPSHHFIDSSLYKDVILVAWDPAPYSANLNLWYKKPDYNLFTPYVQYRRRNPDQPFYILHPKFIWQLWDIIQENTEEKIQPNPPSSGFIGILLMMTLCREVHVYEYIPSVRQTELCHYHELYRDAACTLGAYHPLLYEKLLVQRLNTGARGDLRRKGKVVLPGLRAARCPPRA
SIO_010081: ST6GAL2
subclass of: SO_0000673
so part of: ST6GAL2
location: join(1240279..1241203,1249639..1249736,1250693..1250794,1253452..1253626,1260165..1260418)
location: region:1240279-1260418:1
so has part: feature:1240279-1241203:1:exon
so has part: feature:1249639-1249736:1:exon
so has part: feature:1250693-1250794:1:exon
so has part: feature:1253452-1253626:1:exon
so has part: feature:1260165-1260418:1:exon

XP_031296877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1240279-1241203:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1249639-1249736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1250693-1250794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1253452-1253626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1260165-1260418:1:exon

LOC116149513
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149513
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1255533..1260274)
location: region:1255533-1260274:-1
so has part: feature:1255533-1260274:-1:exon
subclass of: SO_0000011

116149513
type: Gene
SIO_000068: ncbigene

position:1255533:-1
position: 1255533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1260274:-1
position: 1260274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1255533-1260274:-1:exon

LOC116149513
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149513
product: uncharacterized LOC116149513
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004133101.1
SIO_010081: LOC116149513
subclass of: SO_0000673
so part of: LOC116149513
location: complement(join(1255533..1256714,1257590..1257678,1260143..1260274))
location: region:1255533-1260274:-1
so has part: feature:1260143-1260274:-1:exon
so has part: feature:1257590-1257678:-1:exon
so has part: feature:1255533-1256714:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1260143-1260274:-1:exon

position:1260143:-1
position: 1260143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1257590-1257678:-1:exon

position:1257590:-1
position: 1257590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1257678:-1
position: 1257678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1255533-1256714:-1:exon

position:1256714:-1
position: 1256714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

UXS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: UXS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1327599..1359920
location: region:1327599-1359920:1
so has part: feature:1327599-1359920:1:exon
subclass of: SO_0000010

105099092
type: Gene
SIO_000068: ncbigene

position:1327599:1
position: 1327599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359920:1
position: 1359920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327599-1359920:1:exon

UXS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: UXS1
product: UDP-glucuronate decarboxylase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_031441019.1
SIO_010081: UXS1
subclass of: SO_0000673
so part of: UXS1
location: join(1327599..1327796,1335968..1335995,1337279..1337327,1338152..1338195,1341019..1341079,1343850..1344030,1347106..1347210,1349833..1349892,1351657..1351778,1352319..1352438,1352742..1352785,1355550..1355610,1356995..1357052,1358722..1358825,1359085..1359920)
location: region:1327599-1359920:1
so has part: feature:1327599-1327796:1:exon
so has part: feature:1335968-1335995:1:exon
so has part: feature:1337279-1337327:1:exon
so has part: feature:1338152-1338195:1:exon
so has part: feature:1341019-1341079:1:exon
so has part: feature:1343850-1344030:1:exon
so has part: feature:1347106-1347210:1:exon
so has part: feature:1349833-1349892:1:exon
so has part: feature:1351657-1351778:1:exon
so has part: feature:1352319-1352438:1:exon
so has part: feature:1352742-1352785:1:exon
so has part: feature:1355550-1355610:1:exon
so has part: feature:1356995-1357052:1:exon
so has part: feature:1358722-1358825:1:exon
so has part: feature:1359085-1359920:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1327599-1327796:1:exon

position:1327796:1
position: 1327796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1335968-1335995:1:exon

position:1335968:1
position: 1335968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335995:1
position: 1335995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1337279-1337327:1:exon

position:1337279:1
position: 1337279
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337327:1
position: 1337327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1338152-1338195:1:exon

position:1338152:1
position: 1338152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1338195:1
position: 1338195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1341019-1341079:1:exon

position:1341019:1
position: 1341019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341079:1
position: 1341079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1343850-1344030:1:exon

position:1343850:1
position: 1343850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1344030:1
position: 1344030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1347106-1347210:1:exon

position:1347106:1
position: 1347106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1347210:1
position: 1347210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1349833-1349892:1:exon

position:1349833:1
position: 1349833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1349892:1
position: 1349892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1351657-1351778:1:exon

position:1351657:1
position: 1351657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1351778:1
position: 1351778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1352319-1352438:1:exon

position:1352319:1
position: 1352319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352438:1
position: 1352438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1352742-1352785:1:exon

position:1352742:1
position: 1352742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352785:1
position: 1352785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1355550-1355610:1:exon

position:1355550:1
position: 1355550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1355610:1
position: 1355610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1356995-1357052:1:exon

position:1356995:1
position: 1356995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357052:1
position: 1357052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1358722-1358825:1:exon

position:1358722:1
position: 1358722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358825:1
position: 1358825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1359085-1359920:1:exon

position:1359085:1
position: 1359085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UXS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: UXS1
product: UDP-glucuronate decarboxylase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_031441018.1
SIO_010081: UXS1
subclass of: SO_0000673
so part of: UXS1
location: join(1327625..1327796,1335968..1335995,1337279..1337327,1338152..1338195,1341019..1341079,1343850..1344030,1347106..1347210,1349833..1349892,1351657..1351778,1352319..1352438,1352742..1352785,1355550..1355610,1356995..1357052,1358722..1358825,1359082..1359566)
location: region:1327625-1359566:1
so has part: feature:1327625-1327796:1:exon
so has part: feature:1335968-1335995:1:exon
so has part: feature:1337279-1337327:1:exon
so has part: feature:1338152-1338195:1:exon
so has part: feature:1341019-1341079:1:exon
so has part: feature:1343850-1344030:1:exon
so has part: feature:1347106-1347210:1:exon
so has part: feature:1349833-1349892:1:exon
so has part: feature:1351657-1351778:1:exon
so has part: feature:1352319-1352438:1:exon
so has part: feature:1352742-1352785:1:exon
so has part: feature:1355550-1355610:1:exon
so has part: feature:1356995-1357052:1:exon
so has part: feature:1358722-1358825:1:exon
so has part: feature:1359082-1359566:1:exon

position:1327625:1
position: 1327625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359566:1
position: 1359566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327625-1327796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335968-1335995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337279-1337327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338152-1338195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341019-1341079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1343850-1344030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347106-1347210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349833-1349892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1351657-1351778:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1352319-1352438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1352742-1352785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1355550-1355610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1356995-1357052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1358722-1358825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1359082-1359566:1:exon

position:1359082:1
position: 1359082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UXS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: UXS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronic acid decarboxylase 1 isoform X1
translation: MLSQALLLRLASAVSRRRMKLLLGVALLAYVASVWGNLVNMRSIQENGELRIESKIEEIVEPLREKIRDLEKSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLADKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVQVPLEEGLNKAIHYFRKELEYQANNQYIPKPKPARIKKGRMRHS
SIO_010081: UXS1
subclass of: SO_0000673
so part of: UXS1
location: join(1327700..1327796,1335968..1335995,1337279..1337327,1338152..1338195,1341019..1341079,1343850..1344030,1347106..1347210,1349833..1349892,1351657..1351778,1352319..1352438,1352742..1352785,1355550..1355610,1356995..1357052,1358722..1358825,1359082..1359216)
location: region:1327700-1359216:1
so has part: feature:1327700-1327796:1:exon
so has part: feature:1335968-1335995:1:exon
so has part: feature:1337279-1337327:1:exon
so has part: feature:1338152-1338195:1:exon
so has part: feature:1341019-1341079:1:exon
so has part: feature:1343850-1344030:1:exon
so has part: feature:1347106-1347210:1:exon
so has part: feature:1349833-1349892:1:exon
so has part: feature:1351657-1351778:1:exon
so has part: feature:1352319-1352438:1:exon
so has part: feature:1352742-1352785:1:exon
so has part: feature:1355550-1355610:1:exon
so has part: feature:1356995-1357052:1:exon
so has part: feature:1358722-1358825:1:exon
so has part: feature:1359082-1359216:1:exon

XP_031296878.1
type: Protein
SIO_000068: ncbiprotein

position:1327700:1
position: 1327700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359216:1
position: 1359216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1327700-1327796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335968-1335995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337279-1337327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338152-1338195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341019-1341079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1343850-1344030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347106-1347210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349833-1349892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1351657-1351778:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1352319-1352438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1352742-1352785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1355550-1355610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1356995-1357052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1358722-1358825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1359082-1359216:1:exon

UXS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: UXS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UDP-glucuronic acid decarboxylase 1 isoform X2
translation: MLSQALLLRLASAVSRRRMKLLLGVALLAYVASVWGNLVNMRSIQENGELRIESKIEEIVEPLREKIRDLEKSFTQKYPPVKFLSEKDRKRILITGGAGFVGSHLADKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKELEYQANNQYIPKPKPARIKKGRMRHS
SIO_010081: UXS1
subclass of: SO_0000673
so part of: UXS1
location: join(1327700..1327796,1335968..1335995,1337279..1337327,1338152..1338195,1341019..1341079,1343850..1344030,1347106..1347210,1349833..1349892,1351657..1351778,1352319..1352438,1352742..1352785,1355550..1355610,1356995..1357052,1358722..1358825,1359085..1359216)
location: region:1327700-1359216:1
so has part: feature:1327700-1327796:1:exon
so has part: feature:1335968-1335995:1:exon
so has part: feature:1337279-1337327:1:exon
so has part: feature:1338152-1338195:1:exon
so has part: feature:1341019-1341079:1:exon
so has part: feature:1343850-1344030:1:exon
so has part: feature:1347106-1347210:1:exon
so has part: feature:1349833-1349892:1:exon
so has part: feature:1351657-1351778:1:exon
so has part: feature:1352319-1352438:1:exon
so has part: feature:1352742-1352785:1:exon
so has part: feature:1355550-1355610:1:exon
so has part: feature:1356995-1357052:1:exon
so has part: feature:1358722-1358825:1:exon
so has part: feature:1359085-1359216:1:exon

XP_031296879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1327700-1327796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1335968-1335995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1337279-1337327:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1338152-1338195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341019-1341079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1343850-1344030:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1347106-1347210:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1349833-1349892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1351657-1351778:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1352319-1352438:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1352742-1352785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1355550-1355610:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1356995-1357052:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1358722-1358825:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1359085-1359216:1:exon

ECRG4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ECRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1362645..1371035)
location: region:1362645-1371035:-1
so has part: feature:1362645-1371035:-1:exon
subclass of: SO_0000010

105099094
type: Gene
SIO_000068: ncbigene

position:1362645:-1
position: 1362645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1371035:-1
position: 1371035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1362645-1371035:-1:exon

ECRG4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ECRG4
product: ECRG4 augurin precursor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_010991881.2
SIO_010081: ECRG4
subclass of: SO_0000673
so part of: ECRG4
location: complement(join(1362645..1362996,1365650..1365807,1367910..1367957,1370412..1371035))
location: region:1362645-1371035:-1
so has part: feature:1370412-1371035:-1:exon
so has part: feature:1367910-1367957:-1:exon
so has part: feature:1365650-1365807:-1:exon
so has part: feature:1362645-1362996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1370412-1371035:-1:exon

position:1370412:-1
position: 1370412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1367910-1367957:-1:exon

position:1367910:-1
position: 1367910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1367957:-1
position: 1367957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1365650-1365807:-1:exon

position:1365650:-1
position: 1365650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365807:-1
position: 1365807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1362645-1362996:-1:exon

position:1362996:-1
position: 1362996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ECRG4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ECRG4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: augurin
translation: MVLLRPILPRVFLSAQRLPRAPPSCPPGVVMAASSAPPAVLVMTALALLLLLCLGPGGVSGNKLQLMLQKREAPAPTKTPVAVPESKAKEFLSGLRRQRRQLWDRSRPEVQQWYQQFLYMGFDEAKFEDDITYWLDRDRNRHDYDDYYQRHHDEDAALGPRAPQSFRHGASVNYDDY
SIO_010081: ECRG4
subclass of: SO_0000673
so part of: ECRG4
location: complement(join(1362838..1362996,1365650..1365807,1367910..1367957,1370412..1370580))
location: region:1362838-1370580:-1
so has part: feature:1370412-1370580:-1:exon
so has part: feature:1367910-1367957:-1:exon
so has part: feature:1365650-1365807:-1:exon
so has part: feature:1362838-1362996:-1:exon

XP_010990183.2
type: Protein
SIO_000068: ncbiprotein

position:1362838:-1
position: 1362838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1370580:-1
position: 1370580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1370412-1370580:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367910-1367957:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365650-1365807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1362838-1362996:-1:exon

NCK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NCK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1394847..1465127)
location: region:1394847-1465127:-1
so has part: feature:1394847-1465127:-1:exon
subclass of: SO_0000010

105099095
type: Gene
SIO_000068: ncbigene

position:1394847:-1
position: 1394847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1465127:-1
position: 1465127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1394847-1465127:-1:exon

NCK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NCK2
product: NCK adaptor protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031441020.1
SIO_010081: NCK2
subclass of: SO_0000673
so part of: NCK2
location: complement(join(1394847..1396083,1404963..1405673,1414933..1415177,1428390..1428555,1464904..1465127))
location: region:1394847-1465127:-1
so has part: feature:1464904-1465127:-1:exon
so has part: feature:1428390-1428555:-1:exon
so has part: feature:1414933-1415177:-1:exon
so has part: feature:1404963-1405673:-1:exon
so has part: feature:1394847-1396083:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1464904-1465127:-1:exon

position:1464904:-1
position: 1464904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1428390-1428555:-1:exon

position:1428390:-1
position: 1428390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428555:-1
position: 1428555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1414933-1415177:-1:exon

position:1414933:-1
position: 1414933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415177:-1
position: 1415177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1404963-1405673:-1:exon

position:1404963:-1
position: 1404963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1405673:-1
position: 1405673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1394847-1396083:-1:exon

position:1396083:-1
position: 1396083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NCK2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: cytoplasmic protein NCK2
translation: MTEEVIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKNSLKKGSLVRNLKDTLGLGRTRRKTSARDASPTPSTDAEFPANGGGADRIYDLSIPAVVKFAYAAEREDELSLVKGSRVTVMEKCSDGWWRGSYNGQVGWFPSNYVLEELDEAAADAPGGPSLRPGAALSNGQGARVLHVVQTLYPFSSXHREELTFDKARTMEVVEKPEDDPEWWRCGNARGQVGXVPKNYWWWLSERPGPARRLRPPRGPARSGRFAGREWYYGNVTRHQAECALNARGVQGDFLVRDSESSPSDFSVSLKASGKNKHFKVQLVDNVYCIGQRRFHSMDELVEHYKKAPIFTSEHGEKLYLVRALQ
SIO_010081: NCK2
subclass of: SO_0000673
so part of: NCK2
location: complement(join(1395889..1396083,1404963..1405673,1414933..1415158))
location: region:1395889-1415158:-1
so has part: feature:1414933-1415158:-1:exon
so has part: feature:1404963-1405673:-1:exon
so has part: feature:1395889-1396083:-1:exon

XP_031296880.1
type: Protein
SIO_000068: ncbiprotein

position:1395889:-1
position: 1395889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1415158:-1
position: 1415158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1414933-1415158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404963-1405673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1395889-1396083:-1:exon

LOC116149515
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149515
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1569403..1584355)
location: region:1569403-1584355:-1
so has part: feature:1569403-1584355:-1:exon
subclass of: SO_0000011

116149515
type: Gene
SIO_000068: ncbigene

position:1569403:-1
position: 1569403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1584355:-1
position: 1584355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1569403-1584355:-1:exon

LOC116149515
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149515
product: uncharacterized LOC116149515, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004133102.1
SIO_010081: LOC116149515
subclass of: SO_0000673
so part of: LOC116149515
location: complement(join(1569403..1569935,1571004..1571139,1572290..1572375,1579363..1579477,1580678..1580846,1583180..1584355))
location: region:1569403-1584355:-1
so has part: feature:1583180-1584355:-1:exon
so has part: feature:1580678-1580846:-1:exon
so has part: feature:1579363-1579477:-1:exon
so has part: feature:1572290-1572375:-1:exon
so has part: feature:1571004-1571139:-1:exon
so has part: feature:1569403-1569935:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583180-1584355:-1:exon

position:1583180:-1
position: 1583180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1580678-1580846:-1:exon

position:1580678:-1
position: 1580678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1580846:-1
position: 1580846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1579363-1579477:-1:exon

position:1579363:-1
position: 1579363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579477:-1
position: 1579477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1572290-1572375:-1:exon

position:1572290:-1
position: 1572290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572375:-1
position: 1572375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1571004-1571139:-1:exon

position:1571004:-1
position: 1571004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1571139:-1
position: 1571139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1569403-1569935:-1:exon

position:1569935:-1
position: 1569935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116149515
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149515
product: uncharacterized LOC116149515, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004133103.1
SIO_010081: LOC116149515
subclass of: SO_0000673
so part of: LOC116149515
location: complement(join(1569403..1569982,1571004..1571139,1572290..1572375,1579363..1579477,1580678..1580846,1583180..1584355))
location: region:1569403-1584355:-1
so has part: feature:1583180-1584355:-1:exon
so has part: feature:1580678-1580846:-1:exon
so has part: feature:1579363-1579477:-1:exon
so has part: feature:1572290-1572375:-1:exon
so has part: feature:1571004-1571139:-1:exon
so has part: feature:1569403-1569982:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1583180-1584355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1580678-1580846:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1579363-1579477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1572290-1572375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1571004-1571139:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1569403-1569982:-1:exon

position:1569982:-1
position: 1569982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FHL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FHL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1572246..1618200
location: region:1572246-1618200:1
so has part: feature:1572246-1618200:1:exon
subclass of: SO_0000010

105099096
type: Gene
SIO_000068: ncbigene

position:1572246:1
position: 1572246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1618200:1
position: 1618200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1572246-1618200:1:exon

FHL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FHL2
product: four and a half LIM domains 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010991883.2
SIO_010081: FHL2
subclass of: SO_0000673
so part of: FHL2
location: join(1572246..1572396,1601701..1601882,1608174..1608348,1614129..1614298,1615022..1615208,1616720..1618200)
location: region:1572246-1618200:1
so has part: feature:1572246-1572396:1:exon
so has part: feature:1601701-1601882:1:exon
so has part: feature:1608174-1608348:1:exon
so has part: feature:1614129-1614298:1:exon
so has part: feature:1615022-1615208:1:exon
so has part: feature:1616720-1618200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1572246-1572396:1:exon

position:1572396:1
position: 1572396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601701-1601882:1:exon

position:1601701:1
position: 1601701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601882:1
position: 1601882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608174-1608348:1:exon

position:1608174:1
position: 1608174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1608348:1
position: 1608348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1614129-1614298:1:exon

position:1614129:1
position: 1614129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1614298:1
position: 1614298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1615022-1615208:1:exon

position:1615022:1
position: 1615022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1615208:1
position: 1615208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1616720-1618200:1:exon

position:1616720:1
position: 1616720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FHL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FHL2
product: four and a half LIM domains 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_031441021.1
SIO_010081: FHL2
subclass of: SO_0000673
so part of: FHL2
location: join(1591827..1592588,1601701..1601882,1608174..1608348,1614129..1614298,1615022..1615208,1616720..1618200)
location: region:1591827-1618200:1
so has part: feature:1591827-1592588:1:exon
so has part: feature:1601701-1601882:1:exon
so has part: feature:1608174-1608348:1:exon
so has part: feature:1614129-1614298:1:exon
so has part: feature:1615022-1615208:1:exon
so has part: feature:1616720-1618200:1:exon

position:1591827:1
position: 1591827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1591827-1592588:1:exon

position:1592588:1
position: 1592588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601701-1601882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608174-1608348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1614129-1614298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1615022-1615208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1616720-1618200:1:exon

FHL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FHL2
product: four and a half LIM domains 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031441022.1
SIO_010081: FHL2
subclass of: SO_0000673
so part of: FHL2
location: join(1592755..1592871,1601701..1601882,1608174..1608348,1614129..1614298,1615022..1615208,1616720..1618200)
location: region:1592755-1618200:1
so has part: feature:1592755-1592871:1:exon
so has part: feature:1601701-1601882:1:exon
so has part: feature:1608174-1608348:1:exon
so has part: feature:1614129-1614298:1:exon
so has part: feature:1615022-1615208:1:exon
so has part: feature:1616720-1618200:1:exon

position:1592755:1
position: 1592755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1592755-1592871:1:exon

position:1592871:1
position: 1592871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1601701-1601882:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608174-1608348:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1614129-1614298:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1615022-1615208:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1616720-1618200:1:exon

FHL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FHL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 2
translation: MTERFDCHHCEGSLFGRKYVLREEQPYCVACFEDLFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRGSLVDKPFAAREDQLLCTDCYSQEYSSRCQECKKAIMPGTRKMEYRGSSWHETCFVCHGCQLPIGTKSFIPKDGQNFCVPCYEEQHALQCVQCQKPITSGGVTYREQPWHKECFVCAACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCAGCANPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
SIO_010081: FHL2
subclass of: SO_0000673
so part of: FHL2
location: join(1601727..1601882,1608174..1608348,1614129..1614298,1615022..1615208,1616720..1616871)
location: region:1601727-1616871:1
so has part: feature:1601727-1601882:1:exon
so has part: feature:1608174-1608348:1:exon
so has part: feature:1614129-1614298:1:exon
so has part: feature:1615022-1615208:1:exon
so has part: feature:1616720-1616871:1:exon

XP_010990185.2
type: Protein
SIO_000068: ncbiprotein

position:1601727:1
position: 1601727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1616871:1
position: 1616871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1601727-1601882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1608174-1608348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1614129-1614298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615022-1615208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1616720-1616871:1:exon

FHL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FHL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 2
translation: MTERFDCHHCEGSLFGRKYVLREEQPYCVACFEDLFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRGSLVDKPFAAREDQLLCTDCYSQEYSSRCQECKKAIMPGTRKMEYRGSSWHETCFVCHGCQLPIGTKSFIPKDGQNFCVPCYEEQHALQCVQCQKPITSGGVTYREQPWHKECFVCAACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCAGCANPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
SIO_010081: FHL2
subclass of: SO_0000673
so part of: FHL2
location: join(1601727..1601882,1608174..1608348,1614129..1614298,1615022..1615208,1616720..1616871)
location: region:1601727-1616871:1
so has part: feature:1601727-1601882:1:exon
so has part: feature:1608174-1608348:1:exon
so has part: feature:1614129-1614298:1:exon
so has part: feature:1615022-1615208:1:exon
so has part: feature:1616720-1616871:1:exon

XP_031296881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1601727-1601882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1608174-1608348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1614129-1614298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615022-1615208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1616720-1616871:1:exon

FHL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FHL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: four and a half LIM domains protein 2
translation: MTERFDCHHCEGSLFGRKYVLREEQPYCVACFEDLFASTCEECGKLIGCDCKDLSYKDRHWHEACFHCSRCRGSLVDKPFAAREDQLLCTDCYSQEYSSRCQECKKAIMPGTRKMEYRGSSWHETCFVCHGCQLPIGTKSFIPKDGQNFCVPCYEEQHALQCVQCQKPITSGGVTYREQPWHKECFVCAACKKPLSGQRFTSRDEFAYCLGCFCDLYAKKCAGCANPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI
SIO_010081: FHL2
subclass of: SO_0000673
so part of: FHL2
location: join(1601727..1601882,1608174..1608348,1614129..1614298,1615022..1615208,1616720..1616871)
location: region:1601727-1616871:1
so has part: feature:1601727-1601882:1:exon
so has part: feature:1608174-1608348:1:exon
so has part: feature:1614129-1614298:1:exon
so has part: feature:1615022-1615208:1:exon
so has part: feature:1616720-1616871:1:exon

XP_031296882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1601727-1601882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1608174-1608348:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1614129-1614298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1615022-1615208:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1616720-1616871:1:exon

C28H2orf49
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: C28H2orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1621366..1629996)
location: region:1621366-1629996:-1
so has part: feature:1621366-1629996:-1:exon
subclass of: SO_0000010

105099097
type: Gene
SIO_000068: ncbigene

position:1621366:-1
position: 1621366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629996:-1
position: 1629996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1621366-1629996:-1:exon

C28H2orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C28H2orf49
product: chromosome 28 C2orf49 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031441027.1
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1621366..1624090,1625953..1626331,1627697..1627863,1629732..1629996))
location: region:1621366-1629996:-1
so has part: feature:1629732-1629996:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626331:-1:exon
so has part: feature:1621366-1624090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629996:-1:exon

position:1629732:-1
position: 1629732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

position:1627697:-1
position: 1627697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627863:-1
position: 1627863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626331:-1:exon

position:1625953:-1
position: 1625953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1626331:-1
position: 1626331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1621366-1624090:-1:exon

position:1624090:-1
position: 1624090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C28H2orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C28H2orf49
product: chromosome 28 C2orf49 homolog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031441031.1
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1621366..1624095,1625953..1626331,1627697..1627863,1629732..1629996))
location: region:1621366-1629996:-1
so has part: feature:1629732-1629996:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626331:-1:exon
so has part: feature:1621366-1624095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621366-1624095:-1:exon

position:1624095:-1
position: 1624095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C28H2orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C28H2orf49
product: chromosome 28 C2orf49 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031441028.1
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1621366..1622221,1624021..1624090,1625953..1626337,1627697..1627863,1629732..1629996))
location: region:1621366-1629996:-1
so has part: feature:1629732-1629996:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1624021-1624090:-1:exon
so has part: feature:1621366-1622221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

position:1626337:-1
position: 1626337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1624021-1624090:-1:exon

position:1624021:-1
position: 1624021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1621366-1622221:-1:exon

position:1622221:-1
position: 1622221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C28H2orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C28H2orf49
product: chromosome 28 C2orf49 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031441026.1
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1621366..1624090,1625953..1626337,1627697..1627863,1629732..1629996))
location: region:1621366-1629996:-1
so has part: feature:1629732-1629996:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1621366-1624090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621366-1624090:-1:exon

C28H2orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C28H2orf49
product: chromosome 28 C2orf49 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031441030.1
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1621366..1622221,1624021..1624095,1625953..1626337,1627697..1627863,1629732..1629996))
location: region:1621366-1629996:-1
so has part: feature:1629732-1629996:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1624021-1624095:-1:exon
so has part: feature:1621366-1622221:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1624021-1624095:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1621366-1622221:-1:exon

C28H2orf49
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C28H2orf49
product: chromosome 28 C2orf49 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_031441029.1
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1621366..1624095,1625953..1626337,1627697..1627863,1629732..1629996))
location: region:1621366-1629996:-1
so has part: feature:1629732-1629996:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1621366-1624095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629996:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1621366-1624095:-1:exon

C28H2orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C28H2orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ashwin isoform X3
translation: MAGDVAGRGCADSELLLHPELLSQEFLLLTLEQKNIAVENDVRVNKDSLTDLYVQHAIPLPRRDLPKNRWGKMMEKKREQHETKNETKSFRSGTVDGLRKRALVMLEGSSTSASIKVRRTEDTDSGRPRPPPPARAPSSAFRKLSDSSASVSPLILSSNLPTNNKMEHNNNDTKQNHDLTHRKSPPGPVKSPPLSPVGTTPVKLKRAAAPREDAEAAPEAPRSKEEDTARYVAVSGSFQKCFRFQAST
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1622196..1622221,1624021..1624090,1625953..1626337,1627697..1627863,1629732..1629830))
location: region:1622196-1629830:-1
so has part: feature:1629732-1629830:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1624021-1624090:-1:exon
so has part: feature:1622196-1622221:-1:exon

XP_031296888.1
type: Protein
SIO_000068: ncbiprotein

position:1622196:-1
position: 1622196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1629830:-1
position: 1629830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1624021-1624090:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1622196-1622221:-1:exon

C28H2orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C28H2orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ashwin isoform X2
translation: MAGDVAGRGCADSELLLHPELLSQEFLLLTLEQKNIAVENDVRVNKDSLTDLYVQHAIPLPRRDLPKNRWGKMMEKKREQHETKNETKRSGTVDGLRKRALVMLEGSSTSASIKVRRTEDTDSGRPRPPPPARAPSSAFRKLSDSSASVSPLILSSNLPTNNKMEHNNNDTKQNHDLTHRKSPPGPVKSPPLSPVGTTPVKLKRAAAPREDAEAAPEAPRSKEEDTARYVAVSGSFQKCKYNCNCSFSHKFTYIDSIYRDLDYCGIFLRGLN
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1623917..1624090,1625953..1626331,1627697..1627863,1629732..1629830))
location: region:1623917-1629830:-1
so has part: feature:1629732-1629830:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626331:-1:exon
so has part: feature:1623917-1624090:-1:exon

XP_031296887.1
type: Protein
SIO_000068: ncbiprotein

position:1623917:-1
position: 1623917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1623917-1624090:-1:exon

C28H2orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C28H2orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ashwin isoform X1
translation: MAGDVAGRGCADSELLLHPELLSQEFLLLTLEQKNIAVENDVRVNKDSLTDLYVQHAIPLPRRDLPKNRWGKMMEKKREQHETKNETKSFRSGTVDGLRKRALVMLEGSSTSASIKVRRTEDTDSGRPRPPPPARAPSSAFRKLSDSSASVSPLILSSNLPTNNKMEHNNNDTKQNHDLTHRKSPPGPVKSPPLSPVGTTPVKLKRAAAPREDAEAAPEAPRSKEEDTARYVAVSGSFQKCKYNCNCSFSHKFTYIDSIYRDLDYCGIFLRGLN
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1623917..1624090,1625953..1626337,1627697..1627863,1629732..1629830))
location: region:1623917-1629830:-1
so has part: feature:1629732-1629830:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1623917-1624090:-1:exon

XP_031296886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1623917-1624090:-1:exon

C28H2orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C28H2orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ashwin isoform X5
translation: MAGDVAGRGCADSELLLHPELLSQEFLLLTLEQKNIAVENDVRVNKDSLTDLYVQHAIPLPRRDLPKNRWGKMMEKKREQHETKNETKRSGTVDGLRKRALVMLEGSSTSASIKVRRTEDTDSGRPRPPPPARAPSSAFRKLSDSSASVSPLILSSNLPTNNKMEHNNNDTKQNHDLTHRKSPPGPVKSPPLSPVGTTPVKLKRAAAPREDAEAANSLKPPEAKRKIQHVTWP
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1624039..1624095,1625953..1626331,1627697..1627863,1629732..1629830))
location: region:1624039-1629830:-1
so has part: feature:1629732-1629830:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626331:-1:exon
so has part: feature:1624039-1624095:-1:exon

XP_031296891.1
type: Protein
SIO_000068: ncbiprotein

position:1624039:-1
position: 1624039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626331:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1624039-1624095:-1:exon

C28H2orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C28H2orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ashwin isoform X4
translation: MAGDVAGRGCADSELLLHPELLSQEFLLLTLEQKNIAVENDVRVNKDSLTDLYVQHAIPLPRRDLPKNRWGKMMEKKREQHETKNETKSFRSGTVDGLRKRALVMLEGSSTSASIKVRRTEDTDSGRPRPPPPARAPSSAFRKLSDSSASVSPLILSSNLPTNNKMEHNNNDTKQNHDLTHRKSPPGPVKSPPLSPVGTTPVKLKRAAAPREDAEAANSLKPPEAKRKIQHVTWP
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1624039..1624095,1625953..1626337,1627697..1627863,1629732..1629830))
location: region:1624039-1629830:-1
so has part: feature:1629732-1629830:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1624039-1624095:-1:exon

XP_031296889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1624039-1624095:-1:exon

C28H2orf49
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C28H2orf49
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ashwin isoform X4
translation: MAGDVAGRGCADSELLLHPELLSQEFLLLTLEQKNIAVENDVRVNKDSLTDLYVQHAIPLPRRDLPKNRWGKMMEKKREQHETKNETKSFRSGTVDGLRKRALVMLEGSSTSASIKVRRTEDTDSGRPRPPPPARAPSSAFRKLSDSSASVSPLILSSNLPTNNKMEHNNNDTKQNHDLTHRKSPPGPVKSPPLSPVGTTPVKLKRAAAPREDAEAANSLKPPEAKRKIQHVTWP
SIO_010081: C28H2orf49
subclass of: SO_0000673
so part of: C28H2orf49
location: complement(join(1624039..1624095,1625953..1626337,1627697..1627863,1629732..1629830))
location: region:1624039-1629830:-1
so has part: feature:1629732-1629830:-1:exon
so has part: feature:1627697-1627863:-1:exon
so has part: feature:1625953-1626337:-1:exon
so has part: feature:1624039-1624095:-1:exon

XP_031296890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1629732-1629830:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1627697-1627863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625953-1626337:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1624039-1624095:-1:exon

TGFBRAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TGFBRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1630162..1664126
location: region:1630162-1664126:1
so has part: feature:1630162-1664126:1:exon
subclass of: SO_0000010

105099098
type: Gene
SIO_000068: ncbigene

position:1630162:1
position: 1630162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1664126:1
position: 1664126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1630162-1664126:1:exon

TGFBRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TGFBRAP1
product: transforming growth factor beta receptor associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_031441024.1
SIO_010081: TGFBRAP1
subclass of: SO_0000673
so part of: TGFBRAP1
location: join(1630162..1630315,1630640..1630697,1642567..1643267,1644945..1645139,1645708..1645862,1650994..1651076,1652248..1652589,1654223..1654280,1655836..1655979,1656349..1656492,1656977..1657136,1659013..1659446,1661601..1664126)
location: region:1630162-1664126:1
so has part: feature:1630162-1630315:1:exon
so has part: feature:1630640-1630697:1:exon
so has part: feature:1642567-1643267:1:exon
so has part: feature:1644945-1645139:1:exon
so has part: feature:1645708-1645862:1:exon
so has part: feature:1650994-1651076:1:exon
so has part: feature:1652248-1652589:1:exon
so has part: feature:1654223-1654280:1:exon
so has part: feature:1655836-1655979:1:exon
so has part: feature:1656349-1656492:1:exon
so has part: feature:1656977-1657136:1:exon
so has part: feature:1659013-1659446:1:exon
so has part: feature:1661601-1664126:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1630162-1630315:1:exon

position:1630315:1
position: 1630315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1630640-1630697:1:exon

position:1630640:1
position: 1630640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1630697:1
position: 1630697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1642567-1643267:1:exon

position:1642567:1
position: 1642567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1643267:1
position: 1643267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1644945-1645139:1:exon

position:1644945:1
position: 1644945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645139:1
position: 1645139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1645708-1645862:1:exon

position:1645708:1
position: 1645708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1645862:1
position: 1645862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1650994-1651076:1:exon

position:1650994:1
position: 1650994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1651076:1
position: 1651076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1652248-1652589:1:exon

position:1652248:1
position: 1652248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1652589:1
position: 1652589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1654223-1654280:1:exon

position:1654223:1
position: 1654223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1654280:1
position: 1654280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1655836-1655979:1:exon

position:1655836:1
position: 1655836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1655979:1
position: 1655979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1656349-1656492:1:exon

position:1656349:1
position: 1656349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1656492:1
position: 1656492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1656977-1657136:1:exon

position:1656977:1
position: 1656977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657136:1
position: 1657136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1659013-1659446:1:exon

position:1659013:1
position: 1659013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659446:1
position: 1659446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1661601-1664126:1:exon

position:1661601:1
position: 1661601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TGFBRAP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: TGFBRAP1
product: transforming growth factor beta receptor associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004133105.1
SIO_010081: TGFBRAP1
so part of: TGFBRAP1
location: join(1630164..1630697,1642567..1643267,1644945..1645139,1645708..1645862,1650994..1651076,1652248..1652589,1654223..1654280,1655836..1655979,1656349..1656492,1656977..1657136,1659013..1659446,1659641..1659832,1661601..1661736)
location: region:1630164-1661736:1
so has part: feature:1630164-1630697:1:exon
so has part: feature:1642567-1643267:1:exon
so has part: feature:1644945-1645139:1:exon
so has part: feature:1645708-1645862:1:exon
so has part: feature:1650994-1651076:1:exon
so has part: feature:1652248-1652589:1:exon
so has part: feature:1654223-1654280:1:exon
so has part: feature:1655836-1655979:1:exon
so has part: feature:1656349-1656492:1:exon
so has part: feature:1656977-1657136:1:exon
so has part: feature:1659013-1659446:1:exon
so has part: feature:1659641-1659832:1:exon
so has part: feature:1661601-1661736:1:exon

position:1630164:1
position: 1630164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661736:1
position: 1661736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1630164-1630697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1642567-1643267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1644945-1645139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1645708-1645862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650994-1651076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1652248-1652589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1654223-1654280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1655836-1655979:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1656349-1656492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1656977-1657136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1659013-1659446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1659641-1659832:1:exon

position:1659641:1
position: 1659641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1659832:1
position: 1659832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1661601-1661736:1:exon

TGFBRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TGFBRAP1
product: transforming growth factor beta receptor associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031441023.1
SIO_010081: TGFBRAP1
subclass of: SO_0000673
so part of: TGFBRAP1
location: join(1630166..1630697,1642567..1643267,1644945..1645139,1645708..1645862,1650994..1651076,1652248..1652589,1654223..1654280,1655836..1655979,1656349..1656492,1656977..1657136,1659013..1659446,1661601..1664126)
location: region:1630166-1664126:1
so has part: feature:1630166-1630697:1:exon
so has part: feature:1642567-1643267:1:exon
so has part: feature:1644945-1645139:1:exon
so has part: feature:1645708-1645862:1:exon
so has part: feature:1650994-1651076:1:exon
so has part: feature:1652248-1652589:1:exon
so has part: feature:1654223-1654280:1:exon
so has part: feature:1655836-1655979:1:exon
so has part: feature:1656349-1656492:1:exon
so has part: feature:1656977-1657136:1:exon
so has part: feature:1659013-1659446:1:exon
so has part: feature:1661601-1664126:1:exon

position:1630166:1
position: 1630166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1630166-1630697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1642567-1643267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1644945-1645139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1645708-1645862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650994-1651076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1652248-1652589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1654223-1654280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1655836-1655979:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1656349-1656492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1656977-1657136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1659013-1659446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1661601-1664126:1:exon

TGFBRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TGFBRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor-beta receptor-associated protein 1 isoform X1
translation: MFCGRPAAAMMSTKAFTLVPAVERELLQGDKERVSLECVECCGRNLYLGTSDCFVHHFLLEEKVLPAGTATFTATKQLHRHLGFKKPVNELRAASALSRLLVLCDSSITLVHMLSLEPVPSGARIKGATAFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFLCLALTTQYIILNYSTGAAQDLFPYCGEERRPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRVLQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLCPFLLPASSSFTRSHPPLHEFADLSQLTQGDQEKVAKCKRFLMSYLNEVRSTEVANGCREDIDTALLKLYAEANHESLLDLLVTENFCLLPDSAAWLEKHKKYFALGLLYHYNHLDAAAVQLWVNIVNGDVHDATRSDLYEYIVDFLTYSLDPELVWKYADWALQKSQEVGVQVFTKRPLDSQQSSFNPADVIACLKKYPQALVKYLEHLVMDRRLQKEEYHTHLAVLYLDEVLQQKPGATGQGTEVTETQAKLRHLLQKSDLYRVHILLDRIRGAGLPMERAILHGRLEQHEEALRILVHELGDFAAAEDYCLWRSEDRDPPYRRRLFHLLLGLCLRPGPSAHELAVAAVDLLNRHATEFDASQVLQLLPGTWSVQLLRPFLMGAVRDSVHARRSAQVAVGLARSENLIYKYDKMKLKGSFVRLSDKKLCQMCQNPFCEPTFVRYPNGGLVHTHCAAGRHTNPSSPSPGTRT
SIO_010081: TGFBRAP1
subclass of: SO_0000673
so part of: TGFBRAP1
location: join(1630684..1630697,1642567..1643267,1644945..1645139,1645708..1645862,1650994..1651076,1652248..1652589,1654223..1654280,1655836..1655979,1656349..1656492,1656977..1657136,1659013..1659446,1661601..1661777)
location: region:1630684-1661777:1
so has part: feature:1630684-1630697:1:exon
so has part: feature:1642567-1643267:1:exon
so has part: feature:1644945-1645139:1:exon
so has part: feature:1645708-1645862:1:exon
so has part: feature:1650994-1651076:1:exon
so has part: feature:1652248-1652589:1:exon
so has part: feature:1654223-1654280:1:exon
so has part: feature:1655836-1655979:1:exon
so has part: feature:1656349-1656492:1:exon
so has part: feature:1656977-1657136:1:exon
so has part: feature:1659013-1659446:1:exon
so has part: feature:1661601-1661777:1:exon

XP_031296883.1
type: Protein
SIO_000068: ncbiprotein

position:1630684:1
position: 1630684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1661777:1
position: 1661777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1630684-1630697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1642567-1643267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1644945-1645139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1645708-1645862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650994-1651076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1652248-1652589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1654223-1654280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1655836-1655979:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1656349-1656492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1656977-1657136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1659013-1659446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1661601-1661777:1:exon

TGFBRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TGFBRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor-beta receptor-associated protein 1 isoform X1
translation: MFCGRPAAAMMSTKAFTLVPAVERELLQGDKERVSLECVECCGRNLYLGTSDCFVHHFLLEEKVLPAGTATFTATKQLHRHLGFKKPVNELRAASALSRLLVLCDSSITLVHMLSLEPVPSGARIKGATAFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFLCLALTTQYIILNYSTGAAQDLFPYCGEERRPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRVLQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLCPFLLPASSSFTRSHPPLHEFADLSQLTQGDQEKVAKCKRFLMSYLNEVRSTEVANGCREDIDTALLKLYAEANHESLLDLLVTENFCLLPDSAAWLEKHKKYFALGLLYHYNHLDAAAVQLWVNIVNGDVHDATRSDLYEYIVDFLTYSLDPELVWKYADWALQKSQEVGVQVFTKRPLDSQQSSFNPADVIACLKKYPQALVKYLEHLVMDRRLQKEEYHTHLAVLYLDEVLQQKPGATGQGTEVTETQAKLRHLLQKSDLYRVHILLDRIRGAGLPMERAILHGRLEQHEEALRILVHELGDFAAAEDYCLWRSEDRDPPYRRRLFHLLLGLCLRPGPSAHELAVAAVDLLNRHATEFDASQVLQLLPGTWSVQLLRPFLMGAVRDSVHARRSAQVAVGLARSENLIYKYDKMKLKGSFVRLSDKKLCQMCQNPFCEPTFVRYPNGGLVHTHCAAGRHTNPSSPSPGTRT
SIO_010081: TGFBRAP1
subclass of: SO_0000673
so part of: TGFBRAP1
location: join(1630684..1630697,1642567..1643267,1644945..1645139,1645708..1645862,1650994..1651076,1652248..1652589,1654223..1654280,1655836..1655979,1656349..1656492,1656977..1657136,1659013..1659446,1661601..1661777)
location: region:1630684-1661777:1
so has part: feature:1630684-1630697:1:exon
so has part: feature:1642567-1643267:1:exon
so has part: feature:1644945-1645139:1:exon
so has part: feature:1645708-1645862:1:exon
so has part: feature:1650994-1651076:1:exon
so has part: feature:1652248-1652589:1:exon
so has part: feature:1654223-1654280:1:exon
so has part: feature:1655836-1655979:1:exon
so has part: feature:1656349-1656492:1:exon
so has part: feature:1656977-1657136:1:exon
so has part: feature:1659013-1659446:1:exon
so has part: feature:1661601-1661777:1:exon

XP_031296884.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1630684-1630697:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1642567-1643267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1644945-1645139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1645708-1645862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650994-1651076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1652248-1652589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1654223-1654280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1655836-1655979:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1656349-1656492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1656977-1657136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1659013-1659446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1661601-1661777:1:exon

TGFBRAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TGFBRAP1
product: transforming growth factor beta receptor associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031441025.1
SIO_010081: TGFBRAP1
subclass of: SO_0000673
so part of: TGFBRAP1
location: join(1635212..1635332,1642567..1643267,1644945..1645139,1645708..1645862,1650994..1651076,1652248..1652589,1654223..1654280,1655836..1655979,1656349..1656492,1656977..1657136,1659013..1659446,1661601..1664126)
location: region:1635212-1664126:1
so has part: feature:1635212-1635332:1:exon
so has part: feature:1642567-1643267:1:exon
so has part: feature:1644945-1645139:1:exon
so has part: feature:1645708-1645862:1:exon
so has part: feature:1650994-1651076:1:exon
so has part: feature:1652248-1652589:1:exon
so has part: feature:1654223-1654280:1:exon
so has part: feature:1655836-1655979:1:exon
so has part: feature:1656349-1656492:1:exon
so has part: feature:1656977-1657136:1:exon
so has part: feature:1659013-1659446:1:exon
so has part: feature:1661601-1664126:1:exon

position:1635212:1
position: 1635212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1635212-1635332:1:exon

position:1635332:1
position: 1635332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1642567-1643267:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1644945-1645139:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1645708-1645862:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1650994-1651076:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1652248-1652589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1654223-1654280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1655836-1655979:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1656349-1656492:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1656977-1657136:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1659013-1659446:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1661601-1664126:1:exon

TGFBRAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TGFBRAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transforming growth factor-beta receptor-associated protein 1 isoform X2
translation: MMSTKAFTLVPAVERELLQGDKERVSLECVECCGRNLYLGTSDCFVHHFLLEEKVLPAGTATFTATKQLHRHLGFKKPVNELRAASALSRLLVLCDSSITLVHMLSLEPVPSGARIKGATAFALNENPVSGDPFCVEVCIISVKRRTIQVFLVYEDRVQIVREVSTPEQPLAVAVDGHFLCLALTTQYIILNYSTGAAQDLFPYCGEERRPIVKRIGRQEFLLAGPGGLGMFATVAGISQRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVATSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRVLQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLCPFLLPASSSFTRSHPPLHEFADLSQLTQGDQEKVAKCKRFLMSYLNEVRSTEVANGCREDIDTALLKLYAEANHESLLDLLVTENFCLLPDSAAWLEKHKKYFALGLLYHYNHLDAAAVQLWVNIVNGDVHDATRSDLYEYIVDFLTYSLDPELVWKYADWALQKSQEVGVQVFTKRPLDSQQSSFNPADVIACLKKYPQALVKYLEHLVMDRRLQKEEYHTHLAVLYLDEVLQQKPGATGQGTEVTETQAKLRHLLQKSDLYRVHILLDRIRGAGLPMERAILHGRLEQHEEALRILVHELGDFAAAEDYCLWRSEDRDPPYRRRLFHLLLGLCLRPGPSAHELAVAAVDLLNRHATEFDASQVLQLLPGTWSVQLLRPFLMGAVRDSVHARRSAQVAVGLARSENLIYKYDKMKLKGSFVRLSDKKLCQMCQNPFCEPTFVRYPNGGLVHTHCAAGRHTNPSSPSPGTRT
SIO_010081: TGFBRAP1
subclass of: SO_0000673
so part of: TGFBRAP1
location: join(1642580..1643267,1644945..1645139,1645708..1645862,1650994..1651076,1652248..1652589,1654223..1654280,1655836..1655979,1656349..1656492,1656977..1657136,1659013..1659446,1661601..1661777)
location: region:1642580-1661777:1
so has part: feature:1642580-1643267:1:exon
so has part: feature:1644945-1645139:1:exon
so has part: feature:1645708-1645862:1:exon
so has part: feature:1650994-1651076:1:exon
so has part: feature:1652248-1652589:1:exon
so has part: feature:1654223-1654280:1:exon
so has part: feature:1655836-1655979:1:exon
so has part: feature:1656349-1656492:1:exon
so has part: feature:1656977-1657136:1:exon
so has part: feature:1659013-1659446:1:exon
so has part: feature:1661601-1661777:1:exon

XP_031296885.1
type: Protein
SIO_000068: ncbiprotein

position:1642580:1
position: 1642580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1642580-1643267:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1644945-1645139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1645708-1645862:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1650994-1651076:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1652248-1652589:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1654223-1654280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1655836-1655979:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1656349-1656492:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1656977-1657136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1659013-1659446:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1661601-1661777:1:exon

GPR45
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GPR45
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1666351..1670903)
location: region:1666351-1670903:-1
so has part: feature:1666351-1670903:-1:exon
subclass of: SO_0000010

105099140
type: Gene
SIO_000068: ncbigene

position:1666351:-1
position: 1666351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670903:-1
position: 1670903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1666351-1670903:-1:exon

GPR45
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GPR45
product: G protein-coupled receptor 45
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031441032.1
SIO_010081: GPR45
subclass of: SO_0000673
so part of: GPR45
location: complement(1666351..1670903)
location: region:1666351-1670903:-1
so has part: feature:1666351-1670903:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1666351-1670903:-1:exon

GPR45
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GPR45
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: probable G-protein coupled receptor 45
translation: MACNGTSLETHGYSLLNASLGVDPGAPTPPAPLRMSLAVIMALMVVVGFLGNAVVCVIVYQRPAMRSAINLLLATLAFSDIMLSVCCMPFTAVTLITVRWRFGDHFCRLSAALYWFFVLEGVAVLLIISVDRFLIIVQRQDRLNPRRAKVIIAASWALSFCVASRRWPAGAVEVPARAPQCVLGYTELPAGRAYVLTLLAAAFFAPFGVMLGSYLCILHTVRKSAVRVHNQSDSLDLRRLPRAALRRLQRQQQVSLDLSFKTKAFTTILTLFVGFSLCWLPHSVYSLLSVFSRGFYCGPSFYATSSCVLWLSYLKSVFNPIVYCWRIKKFREACLELLPQTFQILPKVPERIRRKIQPSTVYVCAENQSAV
SIO_010081: GPR45
subclass of: SO_0000673
so part of: GPR45
location: complement(1668534..1669650)
location: region:1668534-1669650:-1
so has part: feature:1668534-1669650:-1:exon

XP_031296892.1
type: Protein
SIO_000068: ncbiprotein

position:1668534:-1
position: 1668534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669650:-1
position: 1669650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1668534-1669650:-1:exon

LOC116149517
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149517
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1689616..1695246
location: region:1689616-1695246:1
so has part: feature:1689616-1695246:1:exon
subclass of: SO_0000011

116149517
type: Gene
SIO_000068: ncbigene

position:1689616:1
position: 1689616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1695246:1
position: 1695246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689616-1695246:1:exon

LOC116149517
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149517
product: uncharacterized LOC116149517, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004133107.1
SIO_010081: LOC116149517
subclass of: SO_0000673
so part of: LOC116149517
location: join(1689616..1690199,1690359..1690524,1693198..1693364,1694079..1695246)
location: region:1689616-1695246:1
so has part: feature:1689616-1690199:1:exon
so has part: feature:1690359-1690524:1:exon
so has part: feature:1693198-1693364:1:exon
so has part: feature:1694079-1695246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1689616-1690199:1:exon

position:1690199:1
position: 1690199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690359-1690524:1:exon

position:1690359:1
position: 1690359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1690524:1
position: 1690524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1693198-1693364:1:exon

position:1693198:1
position: 1693198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693364:1
position: 1693364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1694079-1695246:1:exon

position:1694079:1
position: 1694079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149517
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149517
product: uncharacterized LOC116149517, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004133109.1
SIO_010081: LOC116149517
subclass of: SO_0000673
so part of: LOC116149517
location: join(1689616..1690191,1690359..1690524,1693198..1693364,1694079..1695246)
location: region:1689616-1695246:1
so has part: feature:1689616-1690191:1:exon
so has part: feature:1690359-1690524:1:exon
so has part: feature:1693198-1693364:1:exon
so has part: feature:1694079-1695246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1689616-1690191:1:exon

position:1690191:1
position: 1690191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1690359-1690524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1693198-1693364:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1694079-1695246:1:exon

LOC116149517
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149517
product: uncharacterized LOC116149517, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004133108.1
SIO_010081: LOC116149517
subclass of: SO_0000673
so part of: LOC116149517
location: join(1690537..1692136,1692602..1693364,1694079..1695246)
location: region:1690537-1695246:1
so has part: feature:1690537-1692136:1:exon
so has part: feature:1692602-1693364:1:exon
so has part: feature:1694079-1695246:1:exon

position:1690537:1
position: 1690537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1690537-1692136:1:exon

position:1692136:1
position: 1692136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1692602-1693364:1:exon

position:1692602:1
position: 1692602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1694079-1695246:1:exon

MRPS9
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MRPS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1708198..1747053)
location: region:1708198-1747053:-1
so has part: feature:1708198-1747053:-1:exon
subclass of: SO_0000010

105099099
type: Gene
SIO_000068: ncbigene

position:1708198:-1
position: 1708198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747053:-1
position: 1747053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1708198-1747053:-1:exon

MRPS9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MRPS9
product: mitochondrial ribosomal protein S9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010991887.2
SIO_010081: MRPS9
subclass of: SO_0000673
so part of: MRPS9
location: complement(join(1708198..1708423,1710015..1710184,1713697..1713805,1714706..1714874,1716899..1716974,1717803..1717888,1726764..1726843,1732851..1732881,1732966..1733028,1745334..1745513,1746876..1747053))
location: region:1708198-1747053:-1
so has part: feature:1746876-1747053:-1:exon
so has part: feature:1745334-1745513:-1:exon
so has part: feature:1732966-1733028:-1:exon
so has part: feature:1732851-1732881:-1:exon
so has part: feature:1726764-1726843:-1:exon
so has part: feature:1717803-1717888:-1:exon
so has part: feature:1716899-1716974:-1:exon
so has part: feature:1714706-1714874:-1:exon
so has part: feature:1713697-1713805:-1:exon
so has part: feature:1710015-1710184:-1:exon
so has part: feature:1708198-1708423:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1746876-1747053:-1:exon

position:1746876:-1
position: 1746876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1745334-1745513:-1:exon

position:1745334:-1
position: 1745334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1745513:-1
position: 1745513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1732966-1733028:-1:exon

position:1732966:-1
position: 1732966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733028:-1
position: 1733028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1732851-1732881:-1:exon

position:1732851:-1
position: 1732851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1732881:-1
position: 1732881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1726764-1726843:-1:exon

position:1726764:-1
position: 1726764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1726843:-1
position: 1726843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1717803-1717888:-1:exon

position:1717803:-1
position: 1717803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1717888:-1
position: 1717888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1716899-1716974:-1:exon

position:1716899:-1
position: 1716899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1716974:-1
position: 1716974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1714706-1714874:-1:exon

position:1714706:-1
position: 1714706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714874:-1
position: 1714874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1713697-1713805:-1:exon

position:1713697:-1
position: 1713697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1713805:-1
position: 1713805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1710015-1710184:-1:exon

position:1710015:-1
position: 1710015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1710184:-1
position: 1710184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1708198-1708423:-1:exon

position:1708423:-1
position: 1708423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MRPS9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MRPS9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 28S ribosomal protein S9, mitochondrial
translation: MAAPCVSCGAAASYRLFLAGRVGFARRQGLWKAVAAELQTSTQCQILRLRHTTAVTTKKNVAALRRETYTMDFIKKQIEEFNLGKRHLANMMGEDPETFTQEDIDRAITYLFPSGLFEKRARPIMKHPEEIFPKQRVVQWGEDGRPFHFLFYTGKQSYYSLMHEAYGKLLDVEKHQNQLKAKGLFSEKTKTKDPIGSRWLIKEELEEMVVEKLSDQDYAQFIRLLERLLALPCREAEEEFVSRFRRSVTVPSRRQLMEPLQHTEQGTAFSTGAGKRKSARADVVVYGSGSGEIRVNGVDYLFYFPVMQDRVQLMFPFQFLGRLGDHDVTCTVSGGGRSAQAGAIRLALARALCSFATEDEVEWMRQAGLLTADPRVRERKKPGQEGARRKFTWKKR
SIO_010081: MRPS9
subclass of: SO_0000673
so part of: MRPS9
location: complement(join(1708332..1708423,1710015..1710184,1713697..1713805,1714706..1714874,1716899..1716974,1717803..1717888,1726764..1726843,1732851..1732881,1732966..1733028,1745334..1745513,1746876..1747010))
location: region:1708332-1747010:-1
so has part: feature:1746876-1747010:-1:exon
so has part: feature:1745334-1745513:-1:exon
so has part: feature:1732966-1733028:-1:exon
so has part: feature:1732851-1732881:-1:exon
so has part: feature:1726764-1726843:-1:exon
so has part: feature:1717803-1717888:-1:exon
so has part: feature:1716899-1716974:-1:exon
so has part: feature:1714706-1714874:-1:exon
so has part: feature:1713697-1713805:-1:exon
so has part: feature:1710015-1710184:-1:exon
so has part: feature:1708332-1708423:-1:exon

XP_010990189.1
type: Protein
SIO_000068: ncbiprotein

position:1708332:-1
position: 1708332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747010:-1
position: 1747010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1746876-1747010:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1745334-1745513:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1732966-1733028:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1732851-1732881:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1726764-1726843:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1717803-1717888:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1716899-1716974:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1714706-1714874:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1713697-1713805:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1710015-1710184:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1708332-1708423:-1:exon

LOC116149519
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1824485..1833213)
location: region:1824485-1833213:-1
so has part: feature:1824485-1833213:-1:exon
subclass of: SO_0000011

116149519
type: Gene
SIO_000068: ncbigene

position:1824485:-1
position: 1824485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1833213:-1
position: 1833213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1824485-1833213:-1:exon

LOC116149519
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149519
product: uncharacterized LOC116149519
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133113.1
SIO_010081: LOC116149519
subclass of: SO_0000673
so part of: LOC116149519
location: complement(join(1824485..1824613,1824953..1826480,1827027..1830194,1833136..1833213))
location: region:1824485-1833213:-1
so has part: feature:1833136-1833213:-1:exon
so has part: feature:1827027-1830194:-1:exon
so has part: feature:1824953-1826480:-1:exon
so has part: feature:1824485-1824613:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1833136-1833213:-1:exon

position:1833136:-1
position: 1833136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1827027-1830194:-1:exon

position:1827027:-1
position: 1827027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1830194:-1
position: 1830194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1824953-1826480:-1:exon

position:1824953:-1
position: 1824953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1826480:-1
position: 1826480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1824485-1824613:-1:exon

position:1824613:-1
position: 1824613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116149518
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149518
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1824538..1835375
location: region:1824538-1835375:1
so has part: feature:1824538-1835375:1:exon
subclass of: SO_0000011

116149518
type: Gene
SIO_000068: ncbigene

position:1824538:1
position: 1824538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1835375:1
position: 1835375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1824538-1835375:1:exon

LOC116149518
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149518
product: uncharacterized LOC116149518, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004133112.1
SIO_010081: LOC116149518
subclass of: SO_0000673
so part of: LOC116149518
location: join(1824538..1824650,1824735..1825763,1826916..1829144,1833212..1834384,1834623..1834671,1834775..1835375)
location: region:1824538-1835375:1
so has part: feature:1824538-1824650:1:exon
so has part: feature:1824735-1825763:1:exon
so has part: feature:1826916-1829144:1:exon
so has part: feature:1833212-1834384:1:exon
so has part: feature:1834623-1834671:1:exon
so has part: feature:1834775-1835375:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1824538-1824650:1:exon

position:1824650:1
position: 1824650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1824735-1825763:1:exon

position:1824735:1
position: 1824735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1825763:1
position: 1825763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1826916-1829144:1:exon

position:1826916:1
position: 1826916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1829144:1
position: 1829144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1833212-1834384:1:exon

position:1833212:1
position: 1833212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834384:1
position: 1834384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1834623-1834671:1:exon

position:1834623:1
position: 1834623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834671:1
position: 1834671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1834775-1835375:1:exon

position:1834775:1
position: 1834775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149518
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149518
product: uncharacterized LOC116149518, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004133110.1
SIO_010081: LOC116149518
subclass of: SO_0000673
so part of: LOC116149518
location: join(1824898..1825020,1825642..1825763,1826916..1829144,1833212..1834384,1834623..1834671,1834775..1835375)
location: region:1824898-1835375:1
so has part: feature:1824898-1825020:1:exon
so has part: feature:1825642-1825763:1:exon
so has part: feature:1826916-1829144:1:exon
so has part: feature:1833212-1834384:1:exon
so has part: feature:1834623-1834671:1:exon
so has part: feature:1834775-1835375:1:exon

position:1824898:1
position: 1824898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1824898-1825020:1:exon

position:1825020:1
position: 1825020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1825642-1825763:1:exon

position:1825642:1
position: 1825642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1826916-1829144:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1833212-1834384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1834623-1834671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1834775-1835375:1:exon

LOC116149518
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149518
product: uncharacterized LOC116149518, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004133111.1
SIO_010081: LOC116149518
subclass of: SO_0000673
so part of: LOC116149518
location: join(1825644..1825763,1826916..1827128,1827626..1829144,1833212..1834384,1834623..1834671,1834775..1835375)
location: region:1825644-1835375:1
so has part: feature:1825644-1825763:1:exon
so has part: feature:1826916-1827128:1:exon
so has part: feature:1827626-1829144:1:exon
so has part: feature:1833212-1834384:1:exon
so has part: feature:1834623-1834671:1:exon
so has part: feature:1834775-1835375:1:exon

position:1825644:1
position: 1825644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1825644-1825763:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1826916-1827128:1:exon

position:1827128:1
position: 1827128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1827626-1829144:1:exon

position:1827626:1
position: 1827626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1833212-1834384:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1834623-1834671:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1834775-1835375:1:exon

POU3F3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: POU3F3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1842050..1845084)
location: region:1842050-1845084:-1
so has part: feature:1842050-1845084:-1:exon
subclass of: SO_0000010

105099101
type: Gene
SIO_000068: ncbigene

position:1842050:-1
position: 1842050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845084:-1
position: 1845084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1842050-1845084:-1:exon

POU3F3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: POU3F3
product: POU class 3 homeobox 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010991888.2
SIO_010081: POU3F3
subclass of: SO_0000673
so part of: POU3F3
location: complement(1842050..1845084)
location: region:1842050-1845084:-1
so has part: feature:1842050-1845084:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1842050-1845084:-1:exon

POU3F3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: POU3F3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1844397..1844399),aa:OTHER)
product: LOW QUALITY PROTEIN: POU domain, class 3, transcription factor 3
translation: MATRLQPLPAGERPAGGRLHRPLGRRLPRRRRRGGAGGGAAAGGGRGGGMQPAAPPVTVGAYRGDPPSVKWCRGELHAGGDGRQQRGHMQPRAQWVTACPRRRRAAAAAREATRRVLAAGGHGRQPDRRSRPAAAAQAPRGRAAPGADDLHAGTALHHRGRRTLGPRPAAPHQXCPRGWGAAALPPRRGRRRRSRSHLPSMAGAAATAAALLYCSLGASQXNGMLRAPPGAGPAAAARAAAPQSLVHRGWLRGDTPELADHHHHHHHHAHPHPPHPHHAQGPPHHGGGGAGPGLNSHDPHSDEATPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLYGNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEXDSSTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRMTPPGIQQQTPDDVYSQVGTVSADTPPPHHGLQTSVQ
SIO_010081: POU3F3
subclass of: SO_0000673
so part of: POU3F3
location: complement(1843591..1845057)
location: region:1843591-1845057:-1
so has part: feature:1843591-1845057:-1:exon

XP_010990190.2
type: Protein
SIO_000068: ncbiprotein

position:1843591:-1
position: 1843591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1845057:-1
position: 1845057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1843591-1845057:-1:exon

LOC105099102
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105099102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1883718..1896313
location: region:1883718-1896313:1
so has part: feature:1883718-1896313:1:exon
subclass of: SO_0000011

105099102
type: Gene
SIO_000068: ncbigene

position:1883718:1
position: 1883718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1896313:1
position: 1896313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1883718-1896313:1:exon

LOC105099102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105099102
product: uncharacterized LOC105099102
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004133114.1
SIO_010081: LOC105099102
subclass of: SO_0000673
so part of: LOC105099102
location: join(1883718..1894425,1895617..1895755,1896129..1896313)
location: region:1883718-1896313:1
so has part: feature:1883718-1894425:1:exon
so has part: feature:1895617-1895755:1:exon
so has part: feature:1896129-1896313:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1883718-1894425:1:exon

position:1894425:1
position: 1894425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1895617-1895755:1:exon

position:1895617:1
position: 1895617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1895755:1
position: 1895755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1896129-1896313:1:exon

position:1896129:1
position: 1896129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(3049842..3049913)
location: region:3049842-3049913:-1
so has part: feature:3049842-3049913:-1:exon
subclass of: SO_0000663

116149584
type: Gene
SIO_000068: ncbigene

position:3049842:-1
position: 3049842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3049913:-1
position: 3049913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049842-3049913:-1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(3049879..3049881),aa:Ala, seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: complement(3049842..3049913)
location: region:3049842-3049913:-1
so has part: feature:3049842-3049913:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3049842-3049913:-1:exon

TMEM182
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TMEM182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3078214..3119183)
location: region:3078214-3119183:-1
so has part: feature:3078214-3119183:-1:exon
subclass of: SO_0000010

105099103
type: Gene
SIO_000068: ncbigene

position:3078214:-1
position: 3078214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3119183:-1
position: 3119183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3078214-3119183:-1:exon

TMEM182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM182
product: transmembrane protein 182, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031441034.1
SIO_010081: TMEM182
subclass of: SO_0000673
so part of: TMEM182
location: complement(join(3078214..3081994,3116791..3116889,3118510..3118609,3118843..3119146))
location: region:3078214-3119146:-1
so has part: feature:3118843-3119146:-1:exon
so has part: feature:3118510-3118609:-1:exon
so has part: feature:3116791-3116889:-1:exon
so has part: feature:3078214-3081994:-1:exon

position:3119146:-1
position: 3119146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3118843-3119146:-1:exon

position:3118843:-1
position: 3118843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3118510-3118609:-1:exon

position:3118510:-1
position: 3118510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118609:-1
position: 3118609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3116791-3116889:-1:exon

position:3116791:-1
position: 3116791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3116889:-1
position: 3116889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3078214-3081994:-1:exon

position:3081994:-1
position: 3081994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM182
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM182
product: transmembrane protein 182, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_010991890.2
SIO_010081: TMEM182
subclass of: SO_0000673
so part of: TMEM182
location: complement(join(3081403..3081994,3095295..3095432,3116791..3116889,3118510..3118609,3118843..3119183))
location: region:3081403-3119183:-1
so has part: feature:3118843-3119183:-1:exon
so has part: feature:3118510-3118609:-1:exon
so has part: feature:3116791-3116889:-1:exon
so has part: feature:3095295-3095432:-1:exon
so has part: feature:3081403-3081994:-1:exon

position:3081403:-1
position: 3081403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3118843-3119183:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3118510-3118609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3116791-3116889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3095295-3095432:-1:exon

position:3095295:-1
position: 3095295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3095432:-1
position: 3095432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3081403-3081994:-1:exon

TMEM182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 182 isoform X2
translation: MRLNIAIFFGALFGALGVLLFLVAFGSDYWLLATEVGKCSGEQNTENVTFHHEGFFWRCWFNGAVEENDSNIWQFWYTNQPPSKNCTHAYLSPYPFMRGQHNSTSYDSAVSILFSLVVMLYVIWVQAVADMESYKNMKMKDCSDFTPSVLYGWSFFLAPAGIFFSLLAGLLFLVVGRHIQIHH
SIO_010081: TMEM182
subclass of: SO_0000673
so part of: TMEM182
location: complement(join(3081774..3081994,3116791..3116889,3118510..3118609,3118843..3118974))
location: region:3081774-3118974:-1
so has part: feature:3118843-3118974:-1:exon
so has part: feature:3118510-3118609:-1:exon
so has part: feature:3116791-3116889:-1:exon
so has part: feature:3081774-3081994:-1:exon

XP_031296894.1
type: Protein
SIO_000068: ncbiprotein

position:3081774:-1
position: 3081774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3118974:-1
position: 3118974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3118843-3118974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3118510-3118609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3116791-3116889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3081774-3081994:-1:exon

TMEM182
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM182
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 182 isoform X1
translation: MRLNIAIFFGALFGALGVLLFLVAFGSDYWLLATEVGKCSGEQNTENVTFHHEGFFWRCWFNGAVEENDSNIWQFWYTNQPPSKNCTHAYLSPYPFMRGQHNSTSYDSAVIYRGFWAVLMLLGVVAVVTASFLIICAAPFASHFLYKAGGGSYIAAGILFSLVVMLYVIWVQAVADMESYKNMKMKDCSDFTPSVLYGWSFFLAPAGIFFSLLAGLLFLVVGRHIQIHH
SIO_010081: TMEM182
subclass of: SO_0000673
so part of: TMEM182
location: complement(join(3081774..3081994,3095295..3095432,3116791..3116889,3118510..3118609,3118843..3118974))
location: region:3081774-3118974:-1
so has part: feature:3118843-3118974:-1:exon
so has part: feature:3118510-3118609:-1:exon
so has part: feature:3116791-3116889:-1:exon
so has part: feature:3095295-3095432:-1:exon
so has part: feature:3081774-3081994:-1:exon

XP_010990192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3118843-3118974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3118510-3118609:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3116791-3116889:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3095295-3095432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3081774-3081994:-1:exon

MFSD9
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MFSD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3131665..3144871
location: region:3131665-3144871:1
so has part: feature:3131665-3144871:1:exon
subclass of: SO_0000010

105099104
type: Gene
SIO_000068: ncbigene

position:3131665:1
position: 3131665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144871:1
position: 3144871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131665-3144871:1:exon

MFSD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MFSD9
product: major facilitator superfamily domain containing 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010991891.2
SIO_010081: MFSD9
subclass of: SO_0000673
so part of: MFSD9
location: join(3131665..3131909,3134895..3134982,3136181..3136224,3140321..3140450,3141481..3141690,3143417..3144871)
location: region:3131665-3144871:1
so has part: feature:3131665-3131909:1:exon
so has part: feature:3134895-3134982:1:exon
so has part: feature:3136181-3136224:1:exon
so has part: feature:3140321-3140450:1:exon
so has part: feature:3141481-3141690:1:exon
so has part: feature:3143417-3144871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3131665-3131909:1:exon

position:3131909:1
position: 3131909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3134895-3134982:1:exon

position:3134895:1
position: 3134895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3134982:1
position: 3134982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3136181-3136224:1:exon

position:3136181:1
position: 3136181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3136224:1
position: 3136224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3140321-3140450:1:exon

position:3140321:1
position: 3140321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3140450:1
position: 3140450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3141481-3141690:1:exon

position:3141481:1
position: 3141481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141690:1
position: 3141690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3143417-3144871:1:exon

position:3143417:1
position: 3143417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MFSD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MFSD9
product: major facilitator superfamily domain containing 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031441035.1
SIO_010081: MFSD9
subclass of: SO_0000673
so part of: MFSD9
location: join(3131665..3131909,3134895..3134982,3136181..3136224,3140321..3140450,3141538..3141690,3143417..3144871)
location: region:3131665-3144871:1
so has part: feature:3131665-3131909:1:exon
so has part: feature:3134895-3134982:1:exon
so has part: feature:3136181-3136224:1:exon
so has part: feature:3140321-3140450:1:exon
so has part: feature:3141538-3141690:1:exon
so has part: feature:3143417-3144871:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3131665-3131909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3134895-3134982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136181-3136224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140321-3140450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141538-3141690:1:exon

position:3141538:1
position: 3141538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3143417-3144871:1:exon

MFSD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MFSD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 9 isoform X1
translation: MERGGPGGPAPDRGLAPATPAPRQEPGTGAEAGAPGPGAVGSRRLLLCLYLVGFLDLFGVSMVVPLLSLHVKSLGVSPTVAGIVGSSYGILQFFSSTLVGCWSDVAGRQSSLLVCILFSALGYLILGASTNVFLFVLARVPVGLFKHTLSISKALLSDLVSEKERPLVLGQFNTASSVGFILGPVVGGYLTELDGGFYLTAFICFSVFILNAGLVWISPWSDGKRGGAKDGPRWGQSHALWGRTGSGTQAAARPPQVEVVATLRGLWHLLGSAAWDVLLVRWLMALAVMLYHSNFVLALQERFGLRPRMAGYLLGSGSALGALAGLALGPVLRLAGHQPRQLLLHLSALTCLLLLAFAATRSVAVMVLCSTLLSVSTSIGRTCITDLQLSVGGAGAGGALLGLGQSVTAVGRVIAPLLSGVAQEVSPCAPPGLGAALALAAVIIMSLNRPHSGSDGSDRLKSE
SIO_010081: MFSD9
subclass of: SO_0000673
so part of: MFSD9
location: join(3131745..3131909,3134895..3134982,3136181..3136224,3140321..3140450,3141481..3141690,3143417..3144171)
location: region:3131745-3144171:1
so has part: feature:3131745-3131909:1:exon
so has part: feature:3134895-3134982:1:exon
so has part: feature:3136181-3136224:1:exon
so has part: feature:3140321-3140450:1:exon
so has part: feature:3141481-3141690:1:exon
so has part: feature:3143417-3144171:1:exon

XP_010990193.2
type: Protein
SIO_000068: ncbiprotein

position:3131745:1
position: 3131745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3144171:1
position: 3144171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131745-3131909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3134895-3134982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136181-3136224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140321-3140450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141481-3141690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3143417-3144171:1:exon

MFSD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MFSD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 9 isoform X2
translation: MERGGPGGPAPDRGLAPATPAPRQEPGTGAEAGAPGPGAVGSRRLLLCLYLVGFLDLFGVSMVVPLLSLHVKSLGVSPTVAGIVGSSYGILQFFSSTLVGCWSDVAGRQSSLLVCILFSALGYLILGASTNVFLFVLARVPVEKERPLVLGQFNTASSVGFILGPVVGGYLTELDGGFYLTAFICFSVFILNAGLVWISPWSDGKRGGAKDGPRWGQSHALWGRTGSGTQAAARPPQVEVVATLRGLWHLLGSAAWDVLLVRWLMALAVMLYHSNFVLALQERFGLRPRMAGYLLGSGSALGALAGLALGPVLRLAGHQPRQLLLHLSALTCLLLLAFAATRSVAVMVLCSTLLSVSTSIGRTCITDLQLSVGGAGAGGALLGLGQSVTAVGRVIAPLLSGVAQEVSPCAPPGLGAALALAAVIIMSLNRPHSGSDGSDRLKSE
SIO_010081: MFSD9
subclass of: SO_0000673
so part of: MFSD9
location: join(3131745..3131909,3134895..3134982,3136181..3136224,3140321..3140450,3141538..3141690,3143417..3144171)
location: region:3131745-3144171:1
so has part: feature:3131745-3131909:1:exon
so has part: feature:3134895-3134982:1:exon
so has part: feature:3136181-3136224:1:exon
so has part: feature:3140321-3140450:1:exon
so has part: feature:3141538-3141690:1:exon
so has part: feature:3143417-3144171:1:exon

XP_031296895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3131745-3131909:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3134895-3134982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136181-3136224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140321-3140450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141538-3141690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3143417-3144171:1:exon

MFSD9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MFSD9
product: major facilitator superfamily domain containing 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031441036.1
SIO_010081: MFSD9
subclass of: SO_0000673
so part of: MFSD9
location: join(3131916..3132094,3134895..3134982,3136181..3136224,3140321..3140450,3141481..3141690,3143417..3144871)
location: region:3131916-3144871:1
so has part: feature:3131916-3132094:1:exon
so has part: feature:3134895-3134982:1:exon
so has part: feature:3136181-3136224:1:exon
so has part: feature:3140321-3140450:1:exon
so has part: feature:3141481-3141690:1:exon
so has part: feature:3143417-3144871:1:exon

position:3131916:1
position: 3131916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131916-3132094:1:exon

position:3132094:1
position: 3132094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3134895-3134982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136181-3136224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140321-3140450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141481-3141690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3143417-3144871:1:exon

MFSD9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MFSD9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: major facilitator superfamily domain-containing protein 9 isoform X3
translation: MPAPSCPVTHSLCTWPQDLFGVSMVVPLLSLHVKSLGVSPTVAGIVGSSYGILQFFSSTLVGCWSDVAGRQSSLLVCILFSALGYLILGASTNVFLFVLARVPVGLFKHTLSISKALLSDLVSEKERPLVLGQFNTASSVGFILGPVVGGYLTELDGGFYLTAFICFSVFILNAGLVWISPWSDGKRGGAKDGPRWGQSHALWGRTGSGTQAAARPPQVEVVATLRGLWHLLGSAAWDVLLVRWLMALAVMLYHSNFVLALQERFGLRPRMAGYLLGSGSALGALAGLALGPVLRLAGHQPRQLLLHLSALTCLLLLAFAATRSVAVMVLCSTLLSVSTSIGRTCITDLQLSVGGAGAGGALLGLGQSVTAVGRVIAPLLSGVAQEVSPCAPPGLGAALALAAVIIMSLNRPHSGSDGSDRLKSE
SIO_010081: MFSD9
subclass of: SO_0000673
so part of: MFSD9
location: join(3132044..3132094,3134895..3134982,3136181..3136224,3140321..3140450,3141481..3141690,3143417..3144171)
location: region:3132044-3144171:1
so has part: feature:3132044-3132094:1:exon
so has part: feature:3134895-3134982:1:exon
so has part: feature:3136181-3136224:1:exon
so has part: feature:3140321-3140450:1:exon
so has part: feature:3141481-3141690:1:exon
so has part: feature:3143417-3144171:1:exon

XP_031296896.1
type: Protein
SIO_000068: ncbiprotein

position:3132044:1
position: 3132044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3132044-3132094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3134895-3134982:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3136181-3136224:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3140321-3140450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3141481-3141690:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3143417-3144171:1:exon

SLC9A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SLC9A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3149638..3203999)
location: region:3149638-3203999:-1
so has part: feature:3149638-3203999:-1:exon
subclass of: SO_0000010

105099141
type: Gene
SIO_000068: ncbigene

position:3149638:-1
position: 3149638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203999:-1
position: 3203999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3149638-3203999:-1:exon

SLC9A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC9A2
product: solute carrier family 9 member A2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031441037.1
SIO_010081: SLC9A2
subclass of: SO_0000673
so part of: SLC9A2
location: complement(join(3149638..3151213,3152131..3152221,3153573..3153704,3155778..3155874,3158037..3158198,3164239..3164309,3164839..3164928,3167733..3167935,3168351..3168568,3178862..3179112,3186273..3186733,3203697..3203999))
location: region:3149638-3203999:-1
so has part: feature:3203697-3203999:-1:exon
so has part: feature:3186273-3186733:-1:exon
so has part: feature:3178862-3179112:-1:exon
so has part: feature:3168351-3168568:-1:exon
so has part: feature:3167733-3167935:-1:exon
so has part: feature:3164839-3164928:-1:exon
so has part: feature:3164239-3164309:-1:exon
so has part: feature:3158037-3158198:-1:exon
so has part: feature:3155778-3155874:-1:exon
so has part: feature:3153573-3153704:-1:exon
so has part: feature:3152131-3152221:-1:exon
so has part: feature:3149638-3151213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3203697-3203999:-1:exon

position:3203697:-1
position: 3203697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3186273-3186733:-1:exon

position:3186273:-1
position: 3186273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3186733:-1
position: 3186733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3178862-3179112:-1:exon

position:3178862:-1
position: 3178862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3179112:-1
position: 3179112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3168351-3168568:-1:exon

position:3168351:-1
position: 3168351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3168568:-1
position: 3168568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3167733-3167935:-1:exon

position:3167733:-1
position: 3167733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3167935:-1
position: 3167935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3164839-3164928:-1:exon

position:3164839:-1
position: 3164839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3164928:-1
position: 3164928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3164239-3164309:-1:exon

position:3164239:-1
position: 3164239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3164309:-1
position: 3164309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3158037-3158198:-1:exon

position:3158037:-1
position: 3158037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3158198:-1
position: 3158198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3155778-3155874:-1:exon

position:3155778:-1
position: 3155778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3155874:-1
position: 3155874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3153573-3153704:-1:exon

position:3153573:-1
position: 3153573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3153704:-1
position: 3153704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3152131-3152221:-1:exon

position:3152131:-1
position: 3152131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3152221:-1
position: 3152221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3149638-3151213:-1:exon

position:3151213:-1
position: 3151213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC9A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC9A2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 4 codons; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium/hydrogen exchanger 2
translation: METAGRRAPRAGGDRHRRRCAAYAHCRSGGRVGAMAEDPCWTQPRGHGHQLQPAQPGQRGGARDDAVRGEPPAGVHPGLPPRADPLPDHPVDPAGLPGQDRLPPLPQAPTIVPESCLLIMVGLLLGGIIFGVDEKSPPAMKTDVFFLYXSCPLVLDAGYFMPTPAFFENIGTIFWYXVVGTLWNSIGIGVSLFGICQXEAFGLSDITLLQNLLFGSLISAVDPVPVLAVFENIHVNRQLYILVFGXSLLNDAVTVVLYNLFKSFCQMKTIEPVDVFAGIANFFAVGVGGVLIGVFLGFIAAFTTRFTHNVRVIEPLFVFLYSYLSYITAEMFHLSGIMAITACAMTMNKYVEENVSQKSYTTIKYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLIWRALGVFVLTQVINWFRTIPLTFKDQFIIAYGGLRGAICFALVFLLPAAVFPRKKLFITAAIVVIFFTVFILGITIRPLVEFLDVKRSNKKQQAVSEEIHCRFFDHVKTGIEDVCGHWGHNFWRDKFKKFDDKYLRKLLIRENQPKSSIVSLYKKLEIKHAIEMAETGMMSAVPSFASLNDCREEKIRKLTPGEMDEIRELLSRNLYQIRQRTLSYNRHNLTADTSERQAKEILIRRRHSLRESIRKDSSLNREHRASTSASRYLSLPKNTKLPEKLQKKKNISNAGDDSSDSDPDVGTTVLNLQPRARRFLPEQFSKRSSQAYKMEWKNEVDVDCDQGRPRTPPAAHGKEGGAQAPGVLCQPLLSKGQFGSVRGDGVTQALRPKAPPRLVRRASEPGHRKGRLGSEKP
SIO_010081: SLC9A2
subclass of: SO_0000673
so part of: SLC9A2
location: complement(join(3150843..3151213,3152131..3152221,3153573..3153704,3155778..3155874,3158037..3158198,3164239..3164309,3164839..3164928,3167733..3167935,3168351..3168568,3178862..3179112,3186273..3186733,3203697..3203998))
location: region:3150843-3203998:-1
so has part: feature:3203697-3203998:-1:exon
so has part: feature:3186273-3186733:-1:exon
so has part: feature:3178862-3179112:-1:exon
so has part: feature:3168351-3168568:-1:exon
so has part: feature:3167733-3167935:-1:exon
so has part: feature:3164839-3164928:-1:exon
so has part: feature:3164239-3164309:-1:exon
so has part: feature:3158037-3158198:-1:exon
so has part: feature:3155778-3155874:-1:exon
so has part: feature:3153573-3153704:-1:exon
so has part: feature:3152131-3152221:-1:exon
so has part: feature:3150843-3151213:-1:exon

XP_031296897.1
type: Protein
SIO_000068: ncbiprotein

position:3150843:-1
position: 3150843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3203998:-1
position: 3203998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3203697-3203998:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3186273-3186733:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3178862-3179112:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3168351-3168568:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3167733-3167935:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3164839-3164928:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3164239-3164309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3158037-3158198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3155778-3155874:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3153573-3153704:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3152131-3152221:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3150843-3151213:-1:exon

LOC105099142
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105099142
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3231920..3234856
location: region:3231920-3234856:1
so has part: feature:3231920-3234856:1:exon

105099142
type: Gene
SIO_000068: ncbigene

position:3231920:1
position: 3231920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3234856:1
position: 3234856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3231920-3234856:1:exon

LOC105099142
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105099142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105099142
subclass of: SO_0000673
so part of: LOC105099142
location: 3231920..3231936
location: region:3231920-3231936:1
so has part: feature:3231920-3231936:1:exon

position:3231936:1
position: 3231936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3231920-3231936:1:exon

LOC105099142
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105099142
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105099142
subclass of: SO_0000673
so part of: LOC105099142
location: 3234334..3234856
location: region:3234334-3234856:1
so has part: feature:3234334-3234856:1:exon

position:3234334:1
position: 3234334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3234334-3234856:1:exon

SLC9A4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SLC9A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3245997..3287609)
location: region:3245997-3287609:-1
so has part: feature:3245997-3287609:-1:exon
subclass of: SO_0000010

105099143
type: Gene
SIO_000068: ncbigene

position:3245997:-1
position: 3245997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287609:-1
position: 3287609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3245997-3287609:-1:exon

SLC9A4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC9A4
product: solute carrier family 9 member A4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031441038.1
SIO_010081: SLC9A4
subclass of: SO_0000673
so part of: SLC9A4
location: complement(join(3245997..3247312,3247787..3247874,3248583..3248714,3252662..3252758,3258178..3258339,3261558..3261628,3262199..3262285,3262850..3263052,3265554..3265771,3266966..3267225,3280744..3281207,3286866..3287609))
location: region:3245997-3287609:-1
so has part: feature:3286866-3287609:-1:exon
so has part: feature:3280744-3281207:-1:exon
so has part: feature:3266966-3267225:-1:exon
so has part: feature:3265554-3265771:-1:exon
so has part: feature:3262850-3263052:-1:exon
so has part: feature:3262199-3262285:-1:exon
so has part: feature:3261558-3261628:-1:exon
so has part: feature:3258178-3258339:-1:exon
so has part: feature:3252662-3252758:-1:exon
so has part: feature:3248583-3248714:-1:exon
so has part: feature:3247787-3247874:-1:exon
so has part: feature:3245997-3247312:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3286866-3287609:-1:exon

position:3286866:-1
position: 3286866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3280744-3281207:-1:exon

position:3280744:-1
position: 3280744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3281207:-1
position: 3281207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3266966-3267225:-1:exon

position:3266966:-1
position: 3266966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3267225:-1
position: 3267225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3265554-3265771:-1:exon

position:3265554:-1
position: 3265554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3265771:-1
position: 3265771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3262850-3263052:-1:exon

position:3262850:-1
position: 3262850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3263052:-1
position: 3263052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3262199-3262285:-1:exon

position:3262199:-1
position: 3262199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3262285:-1
position: 3262285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3261558-3261628:-1:exon

position:3261558:-1
position: 3261558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3261628:-1
position: 3261628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3258178-3258339:-1:exon

position:3258178:-1
position: 3258178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3258339:-1
position: 3258339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3252662-3252758:-1:exon

position:3252662:-1
position: 3252662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3252758:-1
position: 3252758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3248583-3248714:-1:exon

position:3248583:-1
position: 3248583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3248714:-1
position: 3248714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3247787-3247874:-1:exon

position:3247787:-1
position: 3247787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3247874:-1
position: 3247874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3245997-3247312:-1:exon

position:3247312:-1
position: 3247312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC9A4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC9A4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 4
translation: MGFQLRVPFRPWNWLLLLVALKCSRASSDLNESTNSSAQHDLNVRFAAASFEPAETISVFSLDYDYVQIPYEVTLWILLASLAKIGFHLHPRLPGLVPESCLLIAVGALVGAIIFGTDHKSPPVMDSSIYFLYLLPPIVLEGGYFMPTRPFFENVGSILWWSGLGALISAFGVGLSLHLVCRVPAFGLGDVTLLQSLLFGSLVSAVDPVAVLAVLEEARVNEPLYMMIFGEALLNDGISVVLYNILIAFTKMHKFEDIEPVDILAGCARFVVVGVGGVFFGVVFGFISAFITRFTENISAIEPLIVFMFSYLSYLVAETLYLSGILAITACAVTMKKYVEENVSQKSYTTIKYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCQIWRAISVFALFYVSNQFRTFPFSIKDQCIIFYSGVRGAGSFSLAFLLPLSLFPRKKMFVTATLVVIYFTVFIQGITIGPLVRYLDVRKTNKKESINEELHTRLMDHLKAGIEDVCGQWSHYQVRDKFKKFDHKYLRKILIRKNLPKSSIVSLYKKLEVKQAIEMAETGVLSSAGFSVPRPAQRIQETKRLSPEDVKSMRDILTHNMYQVRQRTLSYNKYNLKPQTSEKQAKEILIRRQNTLRASVRKGHSLPWGKPAGTKNIRYLSFPYSDPQPAGRDARVADCTGNSDSDSEFPSSPFYTPPRTGWLQERRGTQEIIPMKSLPRGGKPPSFGSQRKTSRDEHVGGGGRAALRPKPLCHTVHEERDSGEDSEEGASAGGSRWSAEHRPSRGHHRSHSPLLRRK
SIO_010081: SLC9A4
subclass of: SO_0000673
so part of: SLC9A4
location: complement(join(3246957..3247312,3247787..3247874,3248583..3248714,3252662..3252758,3258178..3258339,3261558..3261628,3262199..3262285,3262850..3263052,3265554..3265771,3266966..3267225,3280744..3281207,3286866..3287121))
location: region:3246957-3287121:-1
so has part: feature:3286866-3287121:-1:exon
so has part: feature:3280744-3281207:-1:exon
so has part: feature:3266966-3267225:-1:exon
so has part: feature:3265554-3265771:-1:exon
so has part: feature:3262850-3263052:-1:exon
so has part: feature:3262199-3262285:-1:exon
so has part: feature:3261558-3261628:-1:exon
so has part: feature:3258178-3258339:-1:exon
so has part: feature:3252662-3252758:-1:exon
so has part: feature:3248583-3248714:-1:exon
so has part: feature:3247787-3247874:-1:exon
so has part: feature:3246957-3247312:-1:exon

XP_031296898.1
type: Protein
SIO_000068: ncbiprotein

position:3246957:-1
position: 3246957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3287121:-1
position: 3287121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3286866-3287121:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3280744-3281207:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3266966-3267225:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3265554-3265771:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3262850-3263052:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3262199-3262285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3261558-3261628:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3258178-3258339:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3252662-3252758:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3248583-3248714:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3247787-3247874:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3246957-3247312:-1:exon

IL18RAP
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IL18RAP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3294395..3313206)
location: region:3294395-3313206:-1
so has part: feature:3294395-3313206:-1:exon
subclass of: SO_0000010

105099105
type: Gene
SIO_000068: ncbigene

position:3294395:-1
position: 3294395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3313206:-1
position: 3313206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3294395-3313206:-1:exon

IL18RAP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL18RAP
product: interleukin 18 receptor accessory protein
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010991892.2
SIO_010081: IL18RAP
subclass of: SO_0000673
so part of: IL18RAP
location: complement(join(3294395..3295198,3295941..3296114,3298678..3298815,3299893..3300044,3300446..3300569,3301903..3301968,3306156..3306306,3311562..3311745,3311845..3312166,3312627..3312796,3313001..3313206))
location: region:3294395-3313206:-1
so has part: feature:3313001-3313206:-1:exon
so has part: feature:3312627-3312796:-1:exon
so has part: feature:3311845-3312166:-1:exon
so has part: feature:3311562-3311745:-1:exon
so has part: feature:3306156-3306306:-1:exon
so has part: feature:3301903-3301968:-1:exon
so has part: feature:3300446-3300569:-1:exon
so has part: feature:3299893-3300044:-1:exon
so has part: feature:3298678-3298815:-1:exon
so has part: feature:3295941-3296114:-1:exon
so has part: feature:3294395-3295198:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3313001-3313206:-1:exon

position:3313001:-1
position: 3313001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3312627-3312796:-1:exon

position:3312627:-1
position: 3312627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312796:-1
position: 3312796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3311845-3312166:-1:exon

position:3311845:-1
position: 3311845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312166:-1
position: 3312166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3311562-3311745:-1:exon

position:3311562:-1
position: 3311562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3311745:-1
position: 3311745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3306156-3306306:-1:exon

position:3306156:-1
position: 3306156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3306306:-1
position: 3306306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3301903-3301968:-1:exon

position:3301903:-1
position: 3301903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3301968:-1
position: 3301968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3300446-3300569:-1:exon

position:3300446:-1
position: 3300446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3300569:-1
position: 3300569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3299893-3300044:-1:exon

position:3299893:-1
position: 3299893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3300044:-1
position: 3300044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3298678-3298815:-1:exon

position:3298678:-1
position: 3298678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3298815:-1
position: 3298815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3295941-3296114:-1:exon

position:3295941:-1
position: 3295941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3296114:-1
position: 3296114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3294395-3295198:-1:exon

position:3295198:-1
position: 3295198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL18RAP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL18RAP
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: interleukin-18 receptor accessory protein
translation: MLYLGWMLLWLVASGRLEGPDISDCSTKTLPRTYTARCGEEFVLFCDLPEPRKSHSYYRSQLSPTQGSDHLPCSGSKNLSDVQWYLQPQNGGPLVEITQNYPHINKDRRTLHFLTTGMKDAGSYTCRPRIRSPQDEACCVKMILEVKPKTNISCGSPVSYKQSLLLGSMDSIRCPGLSHQSDAQSPEVTWYQNGKLLPEERRSPIEVDEIYDYHQGTYVCDYTRSDNASSWTVRAVVQVKTIVKNTNLKPDILDPVKDTLEAELGKPLTLNCTARFGFERNFKPVIRWYIKDSEQEWEVPAPEEKSVKSTLKDEIIERVFFLKEVTQRDLRRTFTCFAQNSIGNTTHSVQLKEKKGVLFLYILLGTVTSLAGALAAGALLCRYWIELVLLYRTYQSTDETLGDKKEFDAFVSYAKLSSLESEATPSLSEEDLALNLFPEVLENKYGYTLCLLERDVVPGGAYAEDIVSMIKKSRRGVFILSPNYVNGPRIFELQAAVNLALDDQTLKLILIKFSPFQEPECLPHLVKKALRVLPTVTWRGLKSVPPNSRFWTQMRYHMPVKSSKGFTWDQLRIIPRIFSWKRLRKTKATGRSSQPRGWGDEPRTPSPPPSQARRALGPSPRSQVSRDIDEQNTRHGPG
SIO_010081: IL18RAP
subclass of: SO_0000673
so part of: IL18RAP
location: complement(join(3294662..3295198,3295941..3296114,3298678..3298815,3299893..3300044,3300446..3300569,3301903..3301968,3306156..3306306,3311562..3311745,3311845..3312166,3312627..3312696))
location: region:3294662-3312696:-1
so has part: feature:3312627-3312696:-1:exon
so has part: feature:3311845-3312166:-1:exon
so has part: feature:3311562-3311745:-1:exon
so has part: feature:3306156-3306306:-1:exon
so has part: feature:3301903-3301968:-1:exon
so has part: feature:3300446-3300569:-1:exon
so has part: feature:3299893-3300044:-1:exon
so has part: feature:3298678-3298815:-1:exon
so has part: feature:3295941-3296114:-1:exon
so has part: feature:3294662-3295198:-1:exon

XP_010990194.2
type: Protein
SIO_000068: ncbiprotein

position:3294662:-1
position: 3294662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3312696:-1
position: 3312696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3312627-3312696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3311845-3312166:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3311562-3311745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3306156-3306306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3301903-3301968:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3300446-3300569:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3299893-3300044:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3298678-3298815:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3295941-3296114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3294662-3295198:-1:exon

LOC116149501
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149501
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3327709..>3328284
location: region:3327709-3328284:1
so has part: feature:3327709-3328284:1:exon
subclass of: SO_0000010

116149501
type: Gene
SIO_000068: ncbigene

position:3327709:1
position: 3327709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3328284:1
position: 3328284
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327709-3328284:1:exon

LOC116149501
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116149501
product: sodium/hydrogen exchanger 2
inference: similar to RNA sequence, mRNA (same species):INSD:GADZ01015411.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 661 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440985.1
SIO_010081: LOC116149501
subclass of: SO_0000673
so part of: LOC116149501
location: 3327709..>3328284
location: region:3327709-3328284:1
so has part: feature:3327709-3328284:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3327709-3328284:1:exon

LOC116149501
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116149501
inference: similar to RNA sequence, mRNA (same species):INSD:GADZ01015411.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 661 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium/hydrogen exchanger 2
translation: MVGLLLGGIIFGVDEKSPPAMKTDVFFLYLLPPIVLDAGYFMPTRPFFENIGTIFWYAVVGTLWNSIGIGVSLFGICQIEAFGLSDITLLQNLLFGSLISAVDPVAVLAVFENIHVNEQLYILVFGESLLNDAVTVVLYNLFKSFCQMKTIEPVDVFAGIANFFAVGVGGVLIGVFLGFIAAFTTRFTHNVRVIEPLFVFLYSYLSYITAEMFHLSGIMAITACAMTMNKYVEENVSQKSYTTIKYFMKMLSSVSETLIFIFMGVSTVGKNHEWNWAFVCFTLAFCLIWRALGVFVLTQVINWFRTIPLTFKDQFIIAYGGLRGAICFALVFLLPAAVFPRKKLFITAAIVVIFFSV
SIO_010081: LOC116149501
subclass of: SO_0000673
so part of: LOC116149501
location: 3327875..>3328284
location: region:3327875-3328284:1
so has part: feature:3327875-3328284:1:exon

XP_031296845.1
type: Protein
SIO_000068: ncbiprotein

position:3327875:1
position: 3327875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3327875-3328284:1:exon

IL18R1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IL18R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3347505..3384277)
location: region:3347505-3384277:-1
so has part: feature:3347505-3384277:-1:exon
subclass of: SO_0000010

105099106
type: Gene
SIO_000068: ncbigene

position:3347505:-1
position: 3347505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3384277:-1
position: 3384277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3347505-3384277:-1:exon

IL18R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL18R1
product: interleukin 18 receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_010991893.2
SIO_010081: IL18R1
subclass of: SO_0000673
so part of: IL18R1
location: complement(join(3347505..3349707,3351885..3352043,3356235..3356393,3359175..3359314,3362551..3362671,3365465..3365527,3369201..3369348,3371743..3371905,3374664..3374907,3377873..3377957,3383585..3384277))
location: region:3347505-3384277:-1
so has part: feature:3383585-3384277:-1:exon
so has part: feature:3377873-3377957:-1:exon
so has part: feature:3374664-3374907:-1:exon
so has part: feature:3371743-3371905:-1:exon
so has part: feature:3369201-3369348:-1:exon
so has part: feature:3365465-3365527:-1:exon
so has part: feature:3362551-3362671:-1:exon
so has part: feature:3359175-3359314:-1:exon
so has part: feature:3356235-3356393:-1:exon
so has part: feature:3351885-3352043:-1:exon
so has part: feature:3347505-3349707:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3383585-3384277:-1:exon

position:3383585:-1
position: 3383585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3377873-3377957:-1:exon

position:3377873:-1
position: 3377873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3377957:-1
position: 3377957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3374664-3374907:-1:exon

position:3374664:-1
position: 3374664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3374907:-1
position: 3374907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3371743-3371905:-1:exon

position:3371743:-1
position: 3371743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3371905:-1
position: 3371905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3369201-3369348:-1:exon

position:3369201:-1
position: 3369201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3369348:-1
position: 3369348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3365465-3365527:-1:exon

position:3365465:-1
position: 3365465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3365527:-1
position: 3365527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3362551-3362671:-1:exon

position:3362551:-1
position: 3362551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362671:-1
position: 3362671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3359175-3359314:-1:exon

position:3359175:-1
position: 3359175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3359314:-1
position: 3359314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3356235-3356393:-1:exon

position:3356235:-1
position: 3356235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356393:-1
position: 3356393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3351885-3352043:-1:exon

position:3351885:-1
position: 3351885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3352043:-1
position: 3352043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3347505-3349707:-1:exon

position:3349707:-1
position: 3349707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL18R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL18R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-18 receptor 1
translation: MHRTEIPLALLVLTFLGTSEGTCTSRLHITAFEGEPFYLKYCSFSSERENKTTAIKWYKNESHGLVELNSSSSPRIILHDYVLEFWPIELNDSGSYSFRMGNDTHDWKLNVVGRGKHSCFTEKLVISKVVEVKKSLHVACEHSYYQKPVNRTLYKDCQKIENSKNPFSKNAEFEDQGYYTCMFFLRHNGKLFNVTKTFNITIVGDRNNIIPVLHGPKLTHVKVELGKDIQLNCSALMNEKDKIYWNNWKENENDPNIHEEEGQRIRTSEGKLLASKALIIKNINEKNLNRSYSCSVVGKEGIDTKSFILLKKDVIDIPGHVFTRGMIVAVLISVVIVCLVTVGVIYRVDLVLFYRHFTRRDETLTDGKIYDAFVSYLKECRPENGEEHAFAVEILPRVLEKHFGYKLCIFERDVMPGGAAVEEIHSLIEKSRRLIIVLSKSYMSNRVRYELESGLHAALVERRIKIILIEFTPVSDFAFLPQSLKLLKSHRVLKWKADKSESYNSRFWKNLLYLMPAKTVKPCRDESEVLPVFSQS
SIO_010081: IL18R1
subclass of: SO_0000673
so part of: IL18R1
location: complement(join(3349352..3349707,3351885..3352043,3356235..3356393,3359175..3359314,3362551..3362671,3365465..3365527,3369201..3369348,3371743..3371905,3374664..3374907,3377873..3377930))
location: region:3349352-3377930:-1
so has part: feature:3377873-3377930:-1:exon
so has part: feature:3374664-3374907:-1:exon
so has part: feature:3371743-3371905:-1:exon
so has part: feature:3369201-3369348:-1:exon
so has part: feature:3365465-3365527:-1:exon
so has part: feature:3362551-3362671:-1:exon
so has part: feature:3359175-3359314:-1:exon
so has part: feature:3356235-3356393:-1:exon
so has part: feature:3351885-3352043:-1:exon
so has part: feature:3349352-3349707:-1:exon

XP_010990195.1
type: Protein
SIO_000068: ncbiprotein

position:3349352:-1
position: 3349352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3377930:-1
position: 3377930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3377873-3377930:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3374664-3374907:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3371743-3371905:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3369201-3369348:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3365465-3365527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3362551-3362671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3359175-3359314:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3356235-3356393:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3351885-3352043:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3349352-3349707:-1:exon

IL1RL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IL1RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3384192..3413132)
location: region:3384192-3413132:-1
so has part: feature:3384192-3413132:-1:exon
subclass of: SO_0000010

105099107
type: Gene
SIO_000068: ncbigene

position:3384192:-1
position: 3384192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3413132:-1
position: 3413132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3384192-3413132:-1:exon

IL1RL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL1
product: interleukin 1 receptor like 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031441040.1
SIO_010081: IL1RL1
subclass of: SO_0000673
so part of: IL1RL1
location: complement(join(3384192..3386094,3388390..3388557,3389483..3389629,3393930..3394075,3394168..3394309,3396249..3396320,3397630..3397792,3397884..3398058,3399035..3399245,3400231..3400402,3413054..3413132))
location: region:3384192-3413132:-1
so has part: feature:3413054-3413132:-1:exon
so has part: feature:3400231-3400402:-1:exon
so has part: feature:3399035-3399245:-1:exon
so has part: feature:3397884-3398058:-1:exon
so has part: feature:3397630-3397792:-1:exon
so has part: feature:3396249-3396320:-1:exon
so has part: feature:3394168-3394309:-1:exon
so has part: feature:3393930-3394075:-1:exon
so has part: feature:3389483-3389629:-1:exon
so has part: feature:3388390-3388557:-1:exon
so has part: feature:3384192-3386094:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3413054-3413132:-1:exon

position:3413054:-1
position: 3413054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3400231-3400402:-1:exon

position:3400231:-1
position: 3400231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3400402:-1
position: 3400402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3399035-3399245:-1:exon

position:3399035:-1
position: 3399035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3399245:-1
position: 3399245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3397884-3398058:-1:exon

position:3397884:-1
position: 3397884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3398058:-1
position: 3398058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3397630-3397792:-1:exon

position:3397630:-1
position: 3397630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3397792:-1
position: 3397792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3396249-3396320:-1:exon

position:3396249:-1
position: 3396249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3396320:-1
position: 3396320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3394168-3394309:-1:exon

position:3394168:-1
position: 3394168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394309:-1
position: 3394309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3393930-3394075:-1:exon

position:3393930:-1
position: 3393930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3394075:-1
position: 3394075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3389483-3389629:-1:exon

position:3389483:-1
position: 3389483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3389629:-1
position: 3389629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3388390-3388557:-1:exon

position:3388390:-1
position: 3388390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3388557:-1
position: 3388557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3384192-3386094:-1:exon

position:3386094:-1
position: 3386094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL1RL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL1
product: interleukin 1 receptor like 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031441039.1
SIO_010081: IL1RL1
subclass of: SO_0000673
so part of: IL1RL1
location: complement(join(3384192..3386094,3388390..3388557,3389483..3389629,3393930..3394075,3394168..3394309,3396249..3396320,3397630..3397792,3397884..3398058,3399035..3399245,3400231..3400440,3401216..3401316))
location: region:3384192-3401316:-1
so has part: feature:3401216-3401316:-1:exon
so has part: feature:3400231-3400440:-1:exon
so has part: feature:3399035-3399245:-1:exon
so has part: feature:3397884-3398058:-1:exon
so has part: feature:3397630-3397792:-1:exon
so has part: feature:3396249-3396320:-1:exon
so has part: feature:3394168-3394309:-1:exon
so has part: feature:3393930-3394075:-1:exon
so has part: feature:3389483-3389629:-1:exon
so has part: feature:3388390-3388557:-1:exon
so has part: feature:3384192-3386094:-1:exon

position:3401316:-1
position: 3401316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3401216-3401316:-1:exon

position:3401216:-1
position: 3401216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3400231-3400440:-1:exon

position:3400440:-1
position: 3400440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3399035-3399245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397884-3398058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3397630-3397792:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396249-3396320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3394168-3394309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3393930-3394075:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3389483-3389629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3388390-3388557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3384192-3386094:-1:exon

IL1RL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL1
product: interleukin 1 receptor like 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010991894.2
SIO_010081: IL1RL1
subclass of: SO_0000673
so part of: IL1RL1
location: complement(join(3384192..3386094,3388390..3388557,3389483..3389629,3393930..3394075,3394168..3394309,3396249..3396320,3397630..3397792,3397884..3398058,3399035..3399245,3400231..3400402,3401216..3401310))
location: region:3384192-3401310:-1
so has part: feature:3401216-3401310:-1:exon
so has part: feature:3400231-3400402:-1:exon
so has part: feature:3399035-3399245:-1:exon
so has part: feature:3397884-3398058:-1:exon
so has part: feature:3397630-3397792:-1:exon
so has part: feature:3396249-3396320:-1:exon
so has part: feature:3394168-3394309:-1:exon
so has part: feature:3393930-3394075:-1:exon
so has part: feature:3389483-3389629:-1:exon
so has part: feature:3388390-3388557:-1:exon
so has part: feature:3384192-3386094:-1:exon

position:3401310:-1
position: 3401310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3401216-3401310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3400231-3400402:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3399035-3399245:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397884-3398058:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3397630-3397792:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3396249-3396320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3394168-3394309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3393930-3394075:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3389483-3389629:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3388390-3388557:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3384192-3386094:-1:exon

IL1RL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 1
translation: MKKLRMRVWGLAVLMVLIPSTSAKFSKSSWGLENEALIVRCPRQEKSQYPVDWYYSKTNTIIPTQRRNRVVASGERLKFLPAEVSDSGSYTCIIRRPTSNKTGYVNVTIYKKPPGCSIPDYLMYSTTSGSEKNSKIYCPTIDLYNWTAPVEWFRNCALLRGSRYQAHKSYLLIDNATHQDTGDYTCKFMHNENGVSYSVTATRSFTVIGEQGFSLFPVIIAPSQNETREVEIGKPANITCSACFGKGSQIMAEVLWQVNRSKVANFGEARIQEEQGQNQSSSNELTCLNTVLRIASVKEEDLWLNYNCLALNFHGLAVHTVRLRRKNPIDQQSTYYLLAGFVILLLLINVLVIILKVFWIEIILLWRDVARPYKTRKDGKVYDAYVIYPRNCKSGSEGAGSVEYFVHQILPDVLENKCGYTLCIYGRDLLPGEDAATAMETCIQQSRRHIFILTPDIVHSKEFAYERGVALHSALLQNDSKAILVEMEALCPPGGLQLEELQDSLKHLVKVQGTLKWREDHVANKRSLNSKFWKHLRYHMPVPSKPPRKTPS
SIO_010081: IL1RL1
subclass of: SO_0000673
so part of: IL1RL1
location: complement(join(3385736..3386094,3388390..3388557,3389483..3389629,3393930..3394075,3394168..3394309,3396249..3396320,3397630..3397792,3397884..3398058,3399035..3399245,3400231..3400306))
location: region:3385736-3400306:-1
so has part: feature:3400231-3400306:-1:exon
so has part: feature:3399035-3399245:-1:exon
so has part: feature:3397884-3398058:-1:exon
so has part: feature:3397630-3397792:-1:exon
so has part: feature:3396249-3396320:-1:exon
so has part: feature:3394168-3394309:-1:exon
so has part: feature:3393930-3394075:-1:exon
so has part: feature:3389483-3389629:-1:exon
so has part: feature:3388390-3388557:-1:exon
so has part: feature:3385736-3386094:-1:exon

XP_010990196.2
type: Protein
SIO_000068: ncbiprotein

position:3385736:-1
position: 3385736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3400306:-1
position: 3400306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3400231-3400306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3399035-3399245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397884-3398058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397630-3397792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3396249-3396320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3394168-3394309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3393930-3394075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3389483-3389629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3388390-3388557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3385736-3386094:-1:exon

IL1RL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 1
translation: MKKLRMRVWGLAVLMVLIPSTSAKFSKSSWGLENEALIVRCPRQEKSQYPVDWYYSKTNTIIPTQRRNRVVASGERLKFLPAEVSDSGSYTCIIRRPTSNKTGYVNVTIYKKPPGCSIPDYLMYSTTSGSEKNSKIYCPTIDLYNWTAPVEWFRNCALLRGSRYQAHKSYLLIDNATHQDTGDYTCKFMHNENGVSYSVTATRSFTVIGEQGFSLFPVIIAPSQNETREVEIGKPANITCSACFGKGSQIMAEVLWQVNRSKVANFGEARIQEEQGQNQSSSNELTCLNTVLRIASVKEEDLWLNYNCLALNFHGLAVHTVRLRRKNPIDQQSTYYLLAGFVILLLLINVLVIILKVFWIEIILLWRDVARPYKTRKDGKVYDAYVIYPRNCKSGSEGAGSVEYFVHQILPDVLENKCGYTLCIYGRDLLPGEDAATAMETCIQQSRRHIFILTPDIVHSKEFAYERGVALHSALLQNDSKAILVEMEALCPPGGLQLEELQDSLKHLVKVQGTLKWREDHVANKRSLNSKFWKHLRYHMPVPSKPPRKTPS
SIO_010081: IL1RL1
subclass of: SO_0000673
so part of: IL1RL1
location: complement(join(3385736..3386094,3388390..3388557,3389483..3389629,3393930..3394075,3394168..3394309,3396249..3396320,3397630..3397792,3397884..3398058,3399035..3399245,3400231..3400306))
location: region:3385736-3400306:-1
so has part: feature:3400231-3400306:-1:exon
so has part: feature:3399035-3399245:-1:exon
so has part: feature:3397884-3398058:-1:exon
so has part: feature:3397630-3397792:-1:exon
so has part: feature:3396249-3396320:-1:exon
so has part: feature:3394168-3394309:-1:exon
so has part: feature:3393930-3394075:-1:exon
so has part: feature:3389483-3389629:-1:exon
so has part: feature:3388390-3388557:-1:exon
so has part: feature:3385736-3386094:-1:exon

XP_031296899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3400231-3400306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3399035-3399245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397884-3398058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397630-3397792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3396249-3396320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3394168-3394309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3393930-3394075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3389483-3389629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3388390-3388557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3385736-3386094:-1:exon

IL1RL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 1
translation: MKKLRMRVWGLAVLMVLIPSTSAKFSKSSWGLENEALIVRCPRQEKSQYPVDWYYSKTNTIIPTQRRNRVVASGERLKFLPAEVSDSGSYTCIIRRPTSNKTGYVNVTIYKKPPGCSIPDYLMYSTTSGSEKNSKIYCPTIDLYNWTAPVEWFRNCALLRGSRYQAHKSYLLIDNATHQDTGDYTCKFMHNENGVSYSVTATRSFTVIGEQGFSLFPVIIAPSQNETREVEIGKPANITCSACFGKGSQIMAEVLWQVNRSKVANFGEARIQEEQGQNQSSSNELTCLNTVLRIASVKEEDLWLNYNCLALNFHGLAVHTVRLRRKNPIDQQSTYYLLAGFVILLLLINVLVIILKVFWIEIILLWRDVARPYKTRKDGKVYDAYVIYPRNCKSGSEGAGSVEYFVHQILPDVLENKCGYTLCIYGRDLLPGEDAATAMETCIQQSRRHIFILTPDIVHSKEFAYERGVALHSALLQNDSKAILVEMEALCPPGGLQLEELQDSLKHLVKVQGTLKWREDHVANKRSLNSKFWKHLRYHMPVPSKPPRKTPS
SIO_010081: IL1RL1
subclass of: SO_0000673
so part of: IL1RL1
location: complement(join(3385736..3386094,3388390..3388557,3389483..3389629,3393930..3394075,3394168..3394309,3396249..3396320,3397630..3397792,3397884..3398058,3399035..3399245,3400231..3400306))
location: region:3385736-3400306:-1
so has part: feature:3400231-3400306:-1:exon
so has part: feature:3399035-3399245:-1:exon
so has part: feature:3397884-3398058:-1:exon
so has part: feature:3397630-3397792:-1:exon
so has part: feature:3396249-3396320:-1:exon
so has part: feature:3394168-3394309:-1:exon
so has part: feature:3393930-3394075:-1:exon
so has part: feature:3389483-3389629:-1:exon
so has part: feature:3388390-3388557:-1:exon
so has part: feature:3385736-3386094:-1:exon

XP_031296900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3400231-3400306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3399035-3399245:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3397884-3398058:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3397630-3397792:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3396249-3396320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3394168-3394309:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3393930-3394075:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3389483-3389629:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3388390-3388557:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3385736-3386094:-1:exon

IL1RL2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IL1RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3449826..3478249)
location: region:3449826-3478249:-1
so has part: feature:3449826-3478249:-1:exon
subclass of: SO_0000010

105099108
type: Gene
SIO_000068: ncbigene

position:3449826:-1
position: 3449826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3478249:-1
position: 3478249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3449826-3478249:-1:exon

IL1RL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL2
product: interleukin 1 receptor like 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_010991895.2
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3449826..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3478126..3478249))
location: region:3449826-3478249:-1
so has part: feature:3478126-3478249:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3449826-3452512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3478126-3478249:-1:exon

position:3478126:-1
position: 3478126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

position:3477286:-1
position: 3477286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3477355:-1
position: 3477355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

position:3476222:-1
position: 3476222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3476456:-1
position: 3476456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

position:3472732:-1
position: 3472732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3472924:-1
position: 3472924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

position:3469130:-1
position: 3469130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3469289:-1
position: 3469289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468081:-1:exon

position:3468007:-1
position: 3468007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3468081:-1
position: 3468081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

position:3463416:-1
position: 3463416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3463545:-1
position: 3463545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

position:3462491:-1
position: 3462491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3462627:-1
position: 3462627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458374:-1:exon

position:3458231:-1
position: 3458231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3458374:-1
position: 3458374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

position:3454128:-1
position: 3454128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3454289:-1
position: 3454289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3449826-3452512:-1:exon

position:3452512:-1
position: 3452512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL1RL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL2
product: interleukin 1 receptor like 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031441044.1
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3449826..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3478099..3478154))
location: region:3449826-3478154:-1
so has part: feature:3478099-3478154:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3449826-3452512:-1:exon

position:3478154:-1
position: 3478154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3478099-3478154:-1:exon

position:3478099:-1
position: 3478099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3449826-3452512:-1:exon

IL1RL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL2
product: interleukin 1 receptor like 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031441043.1
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3449826..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3477916..3478117))
location: region:3449826-3478117:-1
so has part: feature:3477916-3478117:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3449826-3452512:-1:exon

position:3478117:-1
position: 3478117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3477916-3478117:-1:exon

position:3477916:-1
position: 3477916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3449826-3452512:-1:exon

IL1RL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL2
product: interleukin 1 receptor like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031441042.1
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3449826..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468078,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3477799..3478117))
location: region:3449826-3478117:-1
so has part: feature:3477799-3478117:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468078:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3449826-3452512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3477799-3478117:-1:exon

position:3477799:-1
position: 3477799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468078:-1:exon

position:3468078:-1
position: 3468078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3449826-3452512:-1:exon

IL1RL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL2
product: interleukin 1 receptor like 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031441045.1
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3449826..3452512,3454128..3454289,3458231..3458326,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3477799..3478117))
location: region:3449826-3478117:-1
so has part: feature:3477799-3478117:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458326:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3449826-3452512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3477799-3478117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458326:-1:exon

position:3458326:-1
position: 3458326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3449826-3452512:-1:exon

IL1RL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1RL2
product: interleukin 1 receptor like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031441041.1
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3449826..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3477799..3478117))
location: region:3449826-3478117:-1
so has part: feature:3477799-3478117:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3449826-3452512:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3477799-3478117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3449826-3452512:-1:exon

IL1RL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 2 isoform X2
translation: MRDAQHHRGMLSLLLCVVSIALPRIIRADACKDVSVQDEMASVGQPTAFNCIYPLPMSGKVNVTWYKFPSKIPISKNIRSRIHQEQNWILFLPLKGEDSGIYECDINDTNICHRIQVNLTVFNKHWCVSGHSQLNVSDDFKQILYVGKDDSLICHLNFPNSFVLDSVKWYKDCKEIEGERFISREKRLLVKNVSAEDGGKYACQARLTHAGKQHTVLNSITVNIEKVQNGGRIPKIIYPKNNSIEVRLGSALIVDCNITDTRDNTNARCWRVNDTLVDHYYNESKRIQEGIEDYTVFQEHIFYTVNITFLEVKMEDYGRPFTCHAGVSAAYFILKPPVPDFRAYLIGGLLALTGAAVSAVCVYNIFKIDIVLWYRSAFHSPGTVEDGKLYDAYVLYPKPQRESQSHDVDTLVLKILPEVLERQCGYKLFIFGRDEFPGQAVVSVIDENIKLCRRLIVIIVPEALSFDLLRNMSEEQITVYNALIQDGIKVILIELEKVEDYTALPESIQYIRQKHGAVQWSGDFTEQSQCAKTKFWKKVRYRMPPRRWPPSPPVQLLQHTPCDLTASSREASVGVLTP
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3452094..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468078,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3477799..3477813))
location: region:3452094-3477813:-1
so has part: feature:3477799-3477813:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468078:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3452094-3452512:-1:exon

XP_031296902.1
type: Protein
SIO_000068: ncbiprotein

position:3452094:-1
position: 3452094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3477813:-1
position: 3477813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3477799-3477813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468078:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3452094-3452512:-1:exon

IL1RL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 2 isoform X4
translation: MRDAQHHRGMLSLLLCVVSIALPRIIRADACKDVSVQDEMASVGQPTAFNCIYPLPMSGKVNVTWYKFPSKIPISKNIRSRIHQEQNWILFLPLKGEDSGIYECDINDTNICHRIQVNLTVFNKHWCVSGHSQLNVSDDFKQILYVGKDDSLICHLNFPNSFVLDSVKWYKDCKEIEGERFISREKRLLVKNVSAEDGGKYACQARLTHAGKQHTVLNSITVNIAEKVQNGGRIPKIIYPKNNSIEVRLGSALIVDCNITDTRDNTNARCWRVNDTLVDHYYNESKRIQEGIEDYTVFQEHIFYTVNITFLEVKMEDYGRPFTCHAGVSAAYFILKPPGAAVSAVCVYNIFKIDIVLWYRSAFHSPGTVEDGKLYDAYVLYPKPQRESQSHDVDTLVLKILPEVLERQCGYKLFIFGRDEFPGQAVVSVIDENIKLCRRLIVIIVPEALSFDLLRNMSEEQITVYNALIQDGIKVILIELEKVEDYTALPESIQYIRQKHGAVQWSGDFTEQSQCAKTKFWKKVRYRMPPRRWPPSPPVQLLQHTPCDLTASSREASVGVLTP
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3452094..3452512,3454128..3454289,3458231..3458326,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3477799..3477813))
location: region:3452094-3477813:-1
so has part: feature:3477799-3477813:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458326:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3452094-3452512:-1:exon

XP_031296905.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3477799-3477813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458326:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3452094-3452512:-1:exon

IL1RL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 2 isoform X1
translation: MRDAQHHRGMLSLLLCVVSIALPRIIRADACKDVSVQDEMASVGQPTAFNCIYPLPMSGKVNVTWYKFPSKIPISKNIRSRIHQEQNWILFLPLKGEDSGIYECDINDTNICHRIQVNLTVFNKHWCVSGHSQLNVSDDFKQILYVGKDDSLICHLNFPNSFVLDSVKWYKDCKEIEGERFISREKRLLVKNVSAEDGGKYACQARLTHAGKQHTVLNSITVNIAEKVQNGGRIPKIIYPKNNSIEVRLGSALIVDCNITDTRDNTNARCWRVNDTLVDHYYNESKRIQEGIEDYTVFQEHIFYTVNITFLEVKMEDYGRPFTCHAGVSAAYFILKPPVPDFRAYLIGGLLALTGAAVSAVCVYNIFKIDIVLWYRSAFHSPGTVEDGKLYDAYVLYPKPQRESQSHDVDTLVLKILPEVLERQCGYKLFIFGRDEFPGQAVVSVIDENIKLCRRLIVIIVPEALSFDLLRNMSEEQITVYNALIQDGIKVILIELEKVEDYTALPESIQYIRQKHGAVQWSGDFTEQSQCAKTKFWKKVRYRMPPRRWPPSPPVQLLQHTPCDLTASSREASVGVLTP
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3452094..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477355,3477799..3477813))
location: region:3452094-3477813:-1
so has part: feature:3477799-3477813:-1:exon
so has part: feature:3477286-3477355:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3452094-3452512:-1:exon

XP_031296901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3477799-3477813:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3477286-3477355:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3452094-3452512:-1:exon

IL1RL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 2 isoform X3
translation: MLSLLLCVVSIALPRIIRADACKDVSVQDEMASVGQPTAFNCIYPLPMSGKVNVTWYKFPSKIPISKNIRSRIHQEQNWILFLPLKGEDSGIYECDINDTNICHRIQVNLTVFNKHWCVSGHSQLNVSDDFKQILYVGKDDSLICHLNFPNSFVLDSVKWYKDCKEIEGERFISREKRLLVKNVSAEDGGKYACQARLTHAGKQHTVLNSITVNIAEKVQNGGRIPKIIYPKNNSIEVRLGSALIVDCNITDTRDNTNARCWRVNDTLVDHYYNESKRIQEGIEDYTVFQEHIFYTVNITFLEVKMEDYGRPFTCHAGVSAAYFILKPPVPDFRAYLIGGLLALTGAAVSAVCVYNIFKIDIVLWYRSAFHSPGTVEDGKLYDAYVLYPKPQRESQSHDVDTLVLKILPEVLERQCGYKLFIFGRDEFPGQAVVSVIDENIKLCRRLIVIIVPEALSFDLLRNMSEEQITVYNALIQDGIKVILIELEKVEDYTALPESIQYIRQKHGAVQWSGDFTEQSQCAKTKFWKKVRYRMPPRRWPPSPPVQLLQHTPCDLTASSREASVGVLTP
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3452094..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477343))
location: region:3452094-3477343:-1
so has part: feature:3477286-3477343:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3452094-3452512:-1:exon

XP_031296903.1
type: Protein
SIO_000068: ncbiprotein

position:3477343:-1
position: 3477343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3477286-3477343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3452094-3452512:-1:exon

IL1RL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 2 isoform X3
translation: MLSLLLCVVSIALPRIIRADACKDVSVQDEMASVGQPTAFNCIYPLPMSGKVNVTWYKFPSKIPISKNIRSRIHQEQNWILFLPLKGEDSGIYECDINDTNICHRIQVNLTVFNKHWCVSGHSQLNVSDDFKQILYVGKDDSLICHLNFPNSFVLDSVKWYKDCKEIEGERFISREKRLLVKNVSAEDGGKYACQARLTHAGKQHTVLNSITVNIAEKVQNGGRIPKIIYPKNNSIEVRLGSALIVDCNITDTRDNTNARCWRVNDTLVDHYYNESKRIQEGIEDYTVFQEHIFYTVNITFLEVKMEDYGRPFTCHAGVSAAYFILKPPVPDFRAYLIGGLLALTGAAVSAVCVYNIFKIDIVLWYRSAFHSPGTVEDGKLYDAYVLYPKPQRESQSHDVDTLVLKILPEVLERQCGYKLFIFGRDEFPGQAVVSVIDENIKLCRRLIVIIVPEALSFDLLRNMSEEQITVYNALIQDGIKVILIELEKVEDYTALPESIQYIRQKHGAVQWSGDFTEQSQCAKTKFWKKVRYRMPPRRWPPSPPVQLLQHTPCDLTASSREASVGVLTP
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3452094..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477343))
location: region:3452094-3477343:-1
so has part: feature:3477286-3477343:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3452094-3452512:-1:exon

XP_031296904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3477286-3477343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3452094-3452512:-1:exon

IL1RL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1RL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor-like 2 isoform X3
translation: MLSLLLCVVSIALPRIIRADACKDVSVQDEMASVGQPTAFNCIYPLPMSGKVNVTWYKFPSKIPISKNIRSRIHQEQNWILFLPLKGEDSGIYECDINDTNICHRIQVNLTVFNKHWCVSGHSQLNVSDDFKQILYVGKDDSLICHLNFPNSFVLDSVKWYKDCKEIEGERFISREKRLLVKNVSAEDGGKYACQARLTHAGKQHTVLNSITVNIAEKVQNGGRIPKIIYPKNNSIEVRLGSALIVDCNITDTRDNTNARCWRVNDTLVDHYYNESKRIQEGIEDYTVFQEHIFYTVNITFLEVKMEDYGRPFTCHAGVSAAYFILKPPVPDFRAYLIGGLLALTGAAVSAVCVYNIFKIDIVLWYRSAFHSPGTVEDGKLYDAYVLYPKPQRESQSHDVDTLVLKILPEVLERQCGYKLFIFGRDEFPGQAVVSVIDENIKLCRRLIVIIVPEALSFDLLRNMSEEQITVYNALIQDGIKVILIELEKVEDYTALPESIQYIRQKHGAVQWSGDFTEQSQCAKTKFWKKVRYRMPPRRWPPSPPVQLLQHTPCDLTASSREASVGVLTP
SIO_010081: IL1RL2
subclass of: SO_0000673
so part of: IL1RL2
location: complement(join(3452094..3452512,3454128..3454289,3458231..3458374,3462491..3462627,3463416..3463545,3468007..3468081,3469130..3469289,3472732..3472924,3476222..3476456,3477286..3477343))
location: region:3452094-3477343:-1
so has part: feature:3477286-3477343:-1:exon
so has part: feature:3476222-3476456:-1:exon
so has part: feature:3472732-3472924:-1:exon
so has part: feature:3469130-3469289:-1:exon
so has part: feature:3468007-3468081:-1:exon
so has part: feature:3463416-3463545:-1:exon
so has part: feature:3462491-3462627:-1:exon
so has part: feature:3458231-3458374:-1:exon
so has part: feature:3454128-3454289:-1:exon
so has part: feature:3452094-3452512:-1:exon

XP_010990197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3477286-3477343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3476222-3476456:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3472732-3472924:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3469130-3469289:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3468007-3468081:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3463416-3463545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3462491-3462627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3458231-3458374:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3454128-3454289:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3452094-3452512:-1:exon

IL1R1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3485845..3542821)
location: region:3485845-3542821:-1
so has part: feature:3485845-3542821:-1:exon
subclass of: SO_0000010

105099109
type: Gene
SIO_000068: ncbigene

position:3485845:-1
position: 3485845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3542821:-1
position: 3542821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3485845-3542821:-1:exon

IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010991899.2
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3485845..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499074,3501717..3501818,3542510..3542821))
location: region:3485845-3542821:-1
so has part: feature:3542510-3542821:-1:exon
so has part: feature:3501717-3501818:-1:exon
so has part: feature:3499008-3499074:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3485845-3487296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3542510-3542821:-1:exon

position:3542510:-1
position: 3542510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3501717-3501818:-1:exon

position:3501717:-1
position: 3501717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3501818:-1
position: 3501818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3499008-3499074:-1:exon

position:3499008:-1
position: 3499008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499074:-1
position: 3499074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3495602-3495836:-1:exon

position:3495602:-1
position: 3495602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495836:-1
position: 3495836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3495313-3495502:-1:exon

position:3495313:-1
position: 3495313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3495502:-1
position: 3495502
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3494372-3494540:-1:exon

position:3494372:-1
position: 3494372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494540:-1
position: 3494540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3492330-3492395:-1:exon

position:3492330:-1
position: 3492330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3492395:-1
position: 3492395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3491634-3491751:-1:exon

position:3491634:-1
position: 3491634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3491751:-1
position: 3491751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3490716-3490867:-1:exon

position:3490716:-1
position: 3490716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3490867:-1
position: 3490867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3488748-3488891:-1:exon

position:3488748:-1
position: 3488748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3488891:-1
position: 3488891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3487853-3488020:-1:exon

position:3487853:-1
position: 3487853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3488020:-1
position: 3488020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3485845-3487296:-1:exon

position:3487296:-1
position: 3487296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031441050.1
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3485845..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499074,3501717..3501818,3503961..3504157,3542510..3542821))
location: region:3485845-3542821:-1
so has part: feature:3542510-3542821:-1:exon
so has part: feature:3503961-3504157:-1:exon
so has part: feature:3501717-3501818:-1:exon
so has part: feature:3499008-3499074:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3485845-3487296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3542510-3542821:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3503961-3504157:-1:exon

position:3503961:-1
position: 3503961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3504157:-1
position: 3504157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3501717-3501818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499008-3499074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3485845-3487296:-1:exon

IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031441052.1
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3485845..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499074,3501717..3501818,3504103..3504161,3542510..3542821))
location: region:3485845-3542821:-1
so has part: feature:3542510-3542821:-1:exon
so has part: feature:3504103-3504161:-1:exon
so has part: feature:3501717-3501818:-1:exon
so has part: feature:3499008-3499074:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3485845-3487296:-1:exon

urn:…
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_010991897.2
SIO_010081: IL1R1
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031441048.1
SIO_010081: IL1R1
subclass of: SO_0000673
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_031441047.1
SIO_010081: IL1R1
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031441055.1
SIO_010081: IL1R1
subclass of: SO_0000673
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031441053.1
SIO_010081: IL1R1
subclass of: SO_0000673
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031441049.1
SIO_010081: IL1R1
subclass of: SO_0000673
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_031441051.1
SIO_010081: IL1R1
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IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031441046.1
SIO_010081: IL1R1
subclass of: SO_0000673
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so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3485845-3487296:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3513939-3514133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3503961-3504161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3501717-3501818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499008-3499074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3485845-3487296:-1:exon

IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_010991896.2
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3485845..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499074,3501717..3501818,3503961..3504161,3504855..3505014))
location: region:3485845-3505014:-1
so has part: feature:3504855-3505014:-1:exon
so has part: feature:3503961-3504161:-1:exon
so has part: feature:3501717-3501818:-1:exon
so has part: feature:3499008-3499074:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3485845-3487296:-1:exon

position:3505014:-1
position: 3505014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3504855-3505014:-1:exon

position:3504855:-1
position: 3504855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3503961-3504161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3501717-3501818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499008-3499074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3485845-3487296:-1:exon

IL1R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R1
product: interleukin 1 receptor type 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_010991898.2
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3485845..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499074,3501717..3501818,3504103..3504161,3504855..3505002))
location: region:3485845-3505002:-1
so has part: feature:3504855-3505002:-1:exon
so has part: feature:3504103-3504161:-1:exon
so has part: feature:3501717-3501818:-1:exon
so has part: feature:3499008-3499074:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3485845-3487296:-1:exon

position:3505002:-1
position: 3505002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3504855-3505002:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3504103-3504161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3501717-3501818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3499008-3499074:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3485845-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296906.1
type: Protein
SIO_000068: ncbiprotein

position:3486878:-1
position: 3486878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3499068:-1
position: 3499068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_010990199.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_010990198.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_010990200.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_010990201.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

IL1R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 1
translation: MKVLLRLVCFIALLISSLEADRCEEREEQVILVSSAHEVDVRSCPLIPSENKGTIIWYKNDSKTVVSTERDSRVHQHKDKLWFVPAKVEDSGHYYCAVRNSTYCLKIKIAAKFVQHEPTLCYSAQAVFTQKLLVPGDGQLVCPYLDFLKDESNALPEVQWYKDCQPLLLDSVNFAGVTNKLIMTNVTTAHKGHYTCRASYVHLGKQYHVTRVIELITLVKNKITRPEIVSPVNETMEVDLGSQLQLVCNVTGRLSDFVYWKWNGSAVPENDPVLVEDFRLVENPLNKKRSTVIAVLNISVVESKFYLHPFTCLAKNTDGMTTAYIQLIHPVPDFQKPTIGICVMLTLVITCSVFIYKIFKIDIVLWYRDSCYVFLPKKASDGKTYDAYILCPKTPEEGATSNSDIFVFKVLPEVLEKQCGYKLFICGRDDYAGESIVQVVNENIKKSRRLIVILVRETSGFSWLGNSSEEQIAMYNALIQEGIKVVLLELEEIQDYEKMPESIQFIKRKHGAIRWSGDISEGSQSTNSRFWKKVRYHMPVQRQLPSSKHQLLSPATGQDSREKRPREVHVPLG
SIO_010081: IL1R1
subclass of: SO_0000673
so part of: IL1R1
location: complement(join(3486878..3487296,3487853..3488020,3488748..3488891,3490716..3490867,3491634..3491751,3492330..3492395,3494372..3494540,3495313..3495502,3495602..3495836,3499008..3499068))
location: region:3486878-3499068:-1
so has part: feature:3499008-3499068:-1:exon
so has part: feature:3495602-3495836:-1:exon
so has part: feature:3495313-3495502:-1:exon
so has part: feature:3494372-3494540:-1:exon
so has part: feature:3492330-3492395:-1:exon
so has part: feature:3491634-3491751:-1:exon
so has part: feature:3490716-3490867:-1:exon
so has part: feature:3488748-3488891:-1:exon
so has part: feature:3487853-3488020:-1:exon
so has part: feature:3486878-3487296:-1:exon

XP_031296915.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3499008-3499068:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3495602-3495836:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3495313-3495502:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3494372-3494540:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3492330-3492395:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3491634-3491751:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490716-3490867:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3488748-3488891:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3487853-3488020:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3486878-3487296:-1:exon

LOC116149523
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149523
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3495729..3516937
location: region:3495729-3516937:1
so has part: feature:3495729-3516937:1:exon
subclass of: SO_0000011

116149523
type: Gene
SIO_000068: ncbigene

position:3495729:1
position: 3495729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3516937:1
position: 3516937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3495729-3516937:1:exon

LOC116149523
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149523
product: uncharacterized LOC116149523
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004133117.1
SIO_010081: LOC116149523
subclass of: SO_0000673
so part of: LOC116149523
location: join(3495729..3495858,3507287..3507294,3516927..3516937)
location: region:3495729-3516937:1
so has part: feature:3495729-3495858:1:exon
so has part: feature:3507287-3507294:1:exon
so has part: feature:3516927-3516937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3495729-3495858:1:exon

position:3495858:1
position: 3495858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3507287-3507294:1:exon

position:3507287:1
position: 3507287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3507294:1
position: 3507294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3516927-3516937:1:exon

position:3516927:1
position: 3516927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL1R2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IL1R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3599838..3628388)
location: region:3599838-3628388:-1
so has part: feature:3599838-3628388:-1:exon
subclass of: SO_0000010

105099111
type: Gene
SIO_000068: ncbigene

position:3599838:-1
position: 3599838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3628388:-1
position: 3628388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3599838-3628388:-1:exon

IL1R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R2
product: interleukin 1 receptor type 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031441056.1
SIO_010081: IL1R2
subclass of: SO_0000673
so part of: IL1R2
location: complement(join(3599838..3600057,3602166..3602308,3603822..3603957,3604793..3604852,3607132..3607303,3609804..3609984,3611973..3612231,3612803..3612930,3628179..3628388))
location: region:3599838-3628388:-1
so has part: feature:3628179-3628388:-1:exon
so has part: feature:3612803-3612930:-1:exon
so has part: feature:3611973-3612231:-1:exon
so has part: feature:3609804-3609984:-1:exon
so has part: feature:3607132-3607303:-1:exon
so has part: feature:3604793-3604852:-1:exon
so has part: feature:3603822-3603957:-1:exon
so has part: feature:3602166-3602308:-1:exon
so has part: feature:3599838-3600057:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3628179-3628388:-1:exon

position:3628179:-1
position: 3628179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3612803-3612930:-1:exon

position:3612803:-1
position: 3612803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3612930:-1
position: 3612930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3611973-3612231:-1:exon

position:3611973:-1
position: 3611973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3612231:-1
position: 3612231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3609804-3609984:-1:exon

position:3609804:-1
position: 3609804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3609984:-1
position: 3609984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3607132-3607303:-1:exon

position:3607132:-1
position: 3607132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3607303:-1
position: 3607303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3604793-3604852:-1:exon

position:3604793:-1
position: 3604793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3604852:-1
position: 3604852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3603822-3603957:-1:exon

position:3603822:-1
position: 3603822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3603957:-1
position: 3603957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3602166-3602308:-1:exon

position:3602166:-1
position: 3602166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3602308:-1
position: 3602308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3599838-3600057:-1:exon

position:3600057:-1
position: 3600057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL1R2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IL1R2
product: interleukin 1 receptor type 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_010991900.2
SIO_010081: IL1R2
subclass of: SO_0000673
so part of: IL1R2
location: complement(join(3599838..3600060,3602166..3602308,3603822..3603957,3604793..3604852,3607132..3607303,3609804..3609984,3611973..3612231,3612803..3612930,3628179..3628380))
location: region:3599838-3628380:-1
so has part: feature:3628179-3628380:-1:exon
so has part: feature:3612803-3612930:-1:exon
so has part: feature:3611973-3612231:-1:exon
so has part: feature:3609804-3609984:-1:exon
so has part: feature:3607132-3607303:-1:exon
so has part: feature:3604793-3604852:-1:exon
so has part: feature:3603822-3603957:-1:exon
so has part: feature:3602166-3602308:-1:exon
so has part: feature:3599838-3600060:-1:exon

position:3628380:-1
position: 3628380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3628179-3628380:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3612803-3612930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3611973-3612231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3609804-3609984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3607132-3607303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3604793-3604852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3603822-3603957:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3602166-3602308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3599838-3600060:-1:exon

position:3600060:-1
position: 3600060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IL1R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 2 isoform X2
translation: MRSCRVWGAGPEGSTSCVLQKFLGAVFILCMLVTGVSAFIIQPEERTVAAGNCQFRGKHVKTRVMLEGEPVAIRCPQLLYWDDASAHINMTWRKNESAVTVPGEEEARVWVQDGVLWIVPASRGDSGTYTCTLRNASYCDEMSVELRVLEKTEVSRPLISYPQILPLSSSGMLVCPDLSEFIRNKTDVKIQWYKDSVPLEQDNKKFLSVKVTSLLMNSVSEEDAGYYSCVMTFAHGGKQYSITRNIKVRVNKREEAIPVIISPQETISASLGSRLTIPCVVFLGAGMPVTTMLWWMANSTQVKDAYQGGRVTEGPRKEYSQNNENYIEVPLIFDPVIREDLHTNYKCVVSNTAHFQTLRTTVKEAATFSWGIALAPLSLIILVLGGIWMHRRCKHRTRKACGLLELKTGHQESAPCKLKEIK
SIO_010081: IL1R2
subclass of: SO_0000673
so part of: IL1R2
location: complement(join(3599882..3600057,3602166..3602308,3603822..3603957,3604793..3604852,3607132..3607303,3609804..3609984,3611973..3612231,3612803..3612930,3628179..3628192))
location: region:3599882-3628192:-1
so has part: feature:3628179-3628192:-1:exon
so has part: feature:3612803-3612930:-1:exon
so has part: feature:3611973-3612231:-1:exon
so has part: feature:3609804-3609984:-1:exon
so has part: feature:3607132-3607303:-1:exon
so has part: feature:3604793-3604852:-1:exon
so has part: feature:3603822-3603957:-1:exon
so has part: feature:3602166-3602308:-1:exon
so has part: feature:3599882-3600057:-1:exon

XP_031296916.1
type: Protein
SIO_000068: ncbiprotein

position:3599882:-1
position: 3599882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3628192:-1
position: 3628192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3628179-3628192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3612803-3612930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3611973-3612231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3609804-3609984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3607132-3607303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3604793-3604852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3603822-3603957:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3602166-3602308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3599882-3600057:-1:exon

IL1R2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IL1R2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-1 receptor type 2 isoform X1
translation: MRSCRVWGAGPEGSTSCVLQKFLGAVFILCMLVTGVSAFIIQPEERTVAAGNCQFRGKHVKTRVMLEGEPVAIRCPQLLYWDDASAHINMTWRKNESAVTVPGEEEARVWVQDGVLWIVPASRGDSGTYTCTLRNASYCDEMSVELRVLEKTEVSRPLISYPQILPLSSSGMLVCPDLSEFIRNKTDVKIQWYKDSVPLEQDNKKFLSVKVTSLLMNSVSEEDAGYYSCVMTFAHGGKQYSITRNIKVRVNKREEAIPVIISPQETISASLGSRLTIPCVVFLGAGMPVTTMLWWMANSTQVKDAYQGGRVTEGPRKEYSQNNENYIEVPLIFDPVIREDLHTNYKCVVSNTAHFQTLRTTVKEAAATFSWGIALAPLSLIILVLGGIWMHRRCKHRTRKACGLLELKTGHQESAPCKLKEIK
SIO_010081: IL1R2
subclass of: SO_0000673
so part of: IL1R2
location: complement(join(3599882..3600060,3602166..3602308,3603822..3603957,3604793..3604852,3607132..3607303,3609804..3609984,3611973..3612231,3612803..3612930,3628179..3628192))
location: region:3599882-3628192:-1
so has part: feature:3628179-3628192:-1:exon
so has part: feature:3612803-3612930:-1:exon
so has part: feature:3611973-3612231:-1:exon
so has part: feature:3609804-3609984:-1:exon
so has part: feature:3607132-3607303:-1:exon
so has part: feature:3604793-3604852:-1:exon
so has part: feature:3603822-3603957:-1:exon
so has part: feature:3602166-3602308:-1:exon
so has part: feature:3599882-3600060:-1:exon

XP_010990202.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3628179-3628192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3612803-3612930:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3611973-3612231:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3609804-3609984:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3607132-3607303:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3604793-3604852:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3603822-3603957:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3602166-3602308:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3599882-3600060:-1:exon

MAP4K4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MAP4K4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3662646..3805930)
location: region:3662646-3805930:-1
so has part: feature:3662646-3805930:-1:exon
subclass of: SO_0000010

105099112
type: Gene
SIO_000068: ncbigene

position:3662646:-1
position: 3662646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3805930:-1
position: 3805930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3662646-3805930:-1:exon

MAP4K4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAP4K4
product: mitogen-activated protein kinase kinase kinase kinase 4, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031441075.1
SIO_010081: MAP4K4
subclass of: SO_0000673
so part of: MAP4K4
location: complement(join(3662646..3665826,3666704..3666884,3667478..3667617,3668434..3668593,3669115..3669288,3670794..3670894,3673174..3673308,3677060..3677203,3678860..3679030,3679322..3679439,3681415..3681606,3682583..3682703,3683061..3683236,3684404..3684412,3684926..3685023,3685673..3685824,3687135..3687241,3691732..3691854,3695291..3695428,3702356..3702566,3703918..3703990,3706302..3706477,3709791..3709869,3711399..3711453,3713615..3713745,3715490..3715580,3719176..3719286,3720633..3720758,3735992..3736048,3805484..3805549,3805873..3805930))
location: region:3662646-3805930:-1
so has part: feature:3805873-3805930:-1:exon
so has part: feature:3805484-3805549:-1:exon
so has part: feature:3735992-3736048:-1:exon
so has part: feature:3720633-3720758:-1:exon
so has part: feature:3719176-3719286:-1:exon
so has part: feature:3715490-3715580:-1:exon
so has part: feature:3713615-3713745:-1:exon
so has part: feature:3711399-3711453:-1:exon
so has part: feature:3709791-3709869:-1:exon
so has part: feature:3706302-3706477:-1:exon
so has part: feature:3703918-3703990:-1:exon
so has part: feature:3702356-3702566:-1:exon
so has part: feature:3695291-3695428:-1:exon
so has part: feature:3691732-3691854:-1:exon
so has part: feature:3687135-3687241:-1:exon
so has part: feature:3685673-3685824:-1:exon
so has part: feature:3684926-3685023:-1:exon
so has part: feature:3684404-3684412:-1:exon
so has part: feature:3683061-3683236:-1:exon
so has part: feature:3682583-3682703:-1:exon
so has part: feature:3681415-3681606:-1:exon
so has part: feature:3679322-3679439:-1:exon
so has part: feature:3678860-3679030:-1:exon
so has part: feature:3677060-3677203:-1:exon
so has part: feature:3673174-3673308:-1:exon
so has part: feature:3670794-3670894:-1:exon
so has part: feature:3669115-3669288:-1:exon
so has part: feature:3668434-3668593:-1:exon
so has part: feature:3667478-3667617:-1:exon
so has part: feature:3666704-3666884:-1:exon
so has part: feature:3662646-3665826:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3805873-3805930:-1:exon

position:3805873:-1
position: 3805873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3805484-3805549:-1:exon

position:3805484:-1
position: 3805484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3805549:-1
position: 3805549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3735992-3736048:-1:exon

position:3735992:-1
position: 3735992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3736048:-1
position: 3736048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3720633-3720758:-1:exon

position:3720633:-1
position: 3720633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3720758:-1
position: 3720758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3719176-3719286:-1:exon

position:3719176:-1
position: 3719176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3719286:-1
position: 3719286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
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MAP4K4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAP4K4
product: mitogen-activated protein kinase kinase kinase kinase 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031441065.1
SIO_010081: MAP4K4
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MAP4K4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAP4K4
product: mitogen-activated protein kinase kinase kinase kinase 4, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031441074.1
SIO_010081: MAP4K4
subclass of: SO_0000673
so part of: MAP4K4
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urn:…
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MAP4K4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAP4K4
product: mitogen-activated protein kinase kinase kinase kinase 4, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031441070.1
SIO_010081: MAP4K4
subclass of: SO_0000673
so part of: MAP4K4
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location: region:3662646-3805930:-1
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MAP4K4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAP4K4
product: mitogen-activated protein kinase kinase kinase kinase 4, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031441069.1
SIO_010081: MAP4K4
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MAP4K4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAP4K4
product: mitogen-activated protein kinase kinase kinase kinase 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031441061.1
SIO_010081: MAP4K4
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MAP4K4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAP4K4
product: mitogen-activated protein kinase kinase kinase kinase 4, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031441072.1
SIO_010081: MAP4K4
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