Camelus dromedarius isolate Drom800 breed African chromosome 26, CamDro3, whole genome shotgun sequence.
type: Entry
definition: Camelus dromedarius isolate Drom800 breed African chromosome 26, CamDro3, whole genome shotgun sequence.
sequence version: NC_044536.1
sequence date: 2019-10-23
sequence: sequence
division: CON
label: NC_044536.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565028
dblink: SAMN03252735
keyword: WGS
keyword: RefSeq
source: Camelus dromedarius (Arabian camel)
organism: Camelus dromedarius
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Camelus.
reference: 1
references: 30972949
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016652.2.\nAssembly name: CamDro3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vetmeduni Vienna on\n2019/10/07. The original whole-genome shotgun project has the\naccession JWIN00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vetmeduni Vienna\nAssembly Date :: FEB-2019\nAssembly Method :: ABySS v. 1.3.6; HiRise v. MAY-2017;\n PBJelly v. 15.8.24; Pilon v. 1.22; ABySS\n Sealer v. 2.0.2; HiRise v. MAY-2018;\n PBJelly v. 15.8.24; BBMAP-CallVariants v.\n 38.12; ABySS Sealer v. 2.1.0\nAssembly Name :: CamDro3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: Illumina HiSeq; Dovetail Hi-C and\n Chicago; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus dromedarius Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 27902444
topology: linear
so has quality: SO_0000987
location: 1..27902444
location: region:1-27902444:1
RO_0002162: 9838

NC_044536
type: RefSeq
SIO_000068: refseq

PRJNA565028
type: BioProject
SIO_000068: bioproject

SAMN03252735
type: BioSample
SIO_000068: biosample

1
title: Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary
author: Elbers, J.P.
author: Rogers, M.F.
author: Perelman, P.L.
author: Proskuryakova, A.A.
author: Serdyukova, N.A.
author: Johnson, W.E.
author: Horin, P.
author: Corander, J.
author: Murphy, D.
author: Burger, P.A.
journal: Mol Ecol Resour
volume: 19
issue: 4
pages: 1015-1026
year: 2019
pubmed: 30972949

30972949
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27902444:1
position: 27902444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-27902444:1:source
so part of: sequence
organism: Camelus dromedarius
mol type: genomic DNA
isolate: Drom800
isolation source: isolated from an animal called Varis
chromosome: 26
sex: female
tissue type: blood
dev stage: adult
country: Austria: Eithental
collection date: 13-Jan-2013
collected by: Pamela Burger
breed: African

9838
type: Taxonomy
SIO_000068: taxonomy

LOC116149083
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149083
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(90563..96011)
location: region:90563-96011:-1
so has part: feature:90563-96011:-1:exon
subclass of: SO_0000011

116149083
type: Gene
SIO_000068: ncbigene

position:90563:-1
position: 90563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96011:-1
position: 96011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90563-96011:-1:exon

LOC116149083
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149083
product: uncharacterized LOC116149083
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004132694.1
SIO_010081: LOC116149083
subclass of: SO_0000673
so part of: LOC116149083
location: complement(join(90563..90574,91153..91257,94001..94117,95951..96011))
location: region:90563-96011:-1
so has part: feature:95951-96011:-1:exon
so has part: feature:94001-94117:-1:exon
so has part: feature:91153-91257:-1:exon
so has part: feature:90563-90574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:95951-96011:-1:exon

position:95951:-1
position: 95951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:94001-94117:-1:exon

position:94001:-1
position: 94001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94117:-1
position: 94117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:91153-91257:-1:exon

position:91153:-1
position: 91153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91257:-1
position: 91257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:90563-90574:-1:exon

position:90574:-1
position: 90574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116149241
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 100201..103325
location: region:100201-103325:1
so has part: feature:100201-103325:1:exon
subclass of: SO_0000010

116149241
type: Gene
SIO_000068: ncbigene

position:100201:1
position: 100201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103325:1
position: 103325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:100201-103325:1:exon

LOC116149241
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116149241
product: extensin-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_031440416.1
SIO_010081: LOC116149241
subclass of: SO_0000673
so part of: LOC116149241
location: join(100201..101254,101388..102871,103005..103325)
location: region:100201-103325:1
so has part: feature:100201-101254:1:exon
so has part: feature:101388-102871:1:exon
so has part: feature:103005-103325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:100201-101254:1:exon

position:101254:1
position: 101254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:101388-102871:1:exon

position:101388:1
position: 101388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:102871:1
position: 102871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:103005-103325:1:exon

position:103005:1
position: 103005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149241
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116149241
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: extensin-like
translation: MHKSISSIKPLRPPKPLQPAQAVQPPPPQRSKPLKTPKPLRPRKPLKPLSRPSRPSRRRQNARKAQACPAAHKPSRPSRRPTPLKPLKLPTPPKPLKAHKTPKPHTSRPSRSSSQGAQADQAVQAAQAAQGDKAAQASQASQAAQAAQDAQPAQAAQAAQPAQADQPHRPHSPQPLTPLKAPKPTKPPKTRSSRTGLTTSQPLKRPSGRRHNARGARPLKPPKRPNRSSRRRHKAQAAAQAAAPPLKPLRPPKPLKPPPHNLKPLKLPKPLKPPKPTKPPPPKPLSRSSRPTQHRSRHQPPAPKPNPLRPPKLSQAAQPPSRAKPLRPPSRSPSRQKPPPTHTLKLPAIRPTAQADQAAAAQPLKSPKHKAAHKAAPKLKPSAAQAAKPLKPLKPPPHTLSRSAHQAAQAAQADSRLRPSRSSRQAAQTALRPHKPLKPLKQPKATAQSLALKPPKPPSRQASCPPKPLKPPKPLRPHHSQAAQPPKRPPKPSEPLKRLPPQRSRRSKLPKPLAAQAAQAPPPKPLNPQKPRRHSPPRRLSRQASGTPQAAAQAAQAFPSLSRPLKPPSSALQAAQCTLPSRLKSRRAAAEPRQAAKPPALTANSHAQASTASQAAQAAQAAQPSSLSSAQAAKSPKPLKPAQAAAHTPSRSAAQAALSRQAAKPPPPKPSTAEAAADTPLKAIKPPKHLKPPKPLRPPKPLKPLKPPKPPSPLKAVQAAAPQRSAPKPSKPPPPLAQVAQATQALKRPSGRPHNARALKLPKPAAQASAQASQAAQPPKPPNAAATPKPPKPLTSKRAPRVHGQTKAAPSIGGIGNKFRDSHGAARPIATAPHRTRLPGTDHHLRGPERRRGLSLTHAQLRSPGLTRRLRDLHASTSAPLPARRRQQRRRQAAAQSPGRLLLRELAQENPAPTRLPQPLGWLPRPRVCASSQARLSSSLWQPAPSGWAPAV
SIO_010081: LOC116149241
subclass of: SO_0000673
so part of: LOC116149241
location: join(100201..101254,101388..102871,103005..103325)
location: region:100201-103325:1
so has part: feature:100201-101254:1:exon
so has part: feature:101388-102871:1:exon
so has part: feature:103005-103325:1:exon

XP_031296276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:100201-101254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:101388-102871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:103005-103325:1:exon

LOC105094307
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105094307
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(160367..179238)
location: region:160367-179238:-1
so has part: feature:160367-179238:-1:exon

105094307
type: Gene
SIO_000068: ncbigene

position:160367:-1
position: 160367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:179238:-1
position: 179238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160367-179238:-1:exon

LOC105094307
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105094307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC105094307
subclass of: SO_0000673
so part of: LOC105094307
location: complement(160367..160682)
location: region:160367-160682:-1
so has part: feature:160367-160682:-1:exon

position:160682:-1
position: 160682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:160367-160682:-1:exon

LOC105094307
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105094307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC105094307
subclass of: SO_0000673
so part of: LOC105094307
location: complement(176506..177575)
location: region:176506-177575:-1
so has part: feature:176506-177575:-1:exon

position:176506:-1
position: 176506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:177575:-1
position: 177575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:176506-177575:-1:exon

LOC105094307
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105094307
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC105094307
subclass of: SO_0000673
so part of: LOC105094307
location: complement(179145..179238)
location: region:179145-179238:-1
so has part: feature:179145-179238:-1:exon

position:179145:-1
position: 179145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:179145-179238:-1:exon

LOC105094306
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105094306
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(183859..185359)
location: region:183859-185359:-1
so has part: feature:183859-185359:-1:exon

105094306
type: Gene
SIO_000068: ncbigene

position:183859:-1
position: 183859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:185359:-1
position: 185359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183859-185359:-1:exon

LOC105094306
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105094306
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105094306
subclass of: SO_0000673
so part of: LOC105094306
location: complement(183859..184824)
location: region:183859-184824:-1
so has part: feature:183859-184824:-1:exon

position:184824:-1
position: 184824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:183859-184824:-1:exon

LOC105094306
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105094306
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 49% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105094306
subclass of: SO_0000673
so part of: LOC105094306
location: complement(185334..185359)
location: region:185334-185359:-1
so has part: feature:185334-185359:-1:exon

position:185334:-1
position: 185334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185334-185359:-1:exon

THAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: THAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(265168..273060)
location: region:265168-273060:-1
so has part: feature:265168-273060:-1:exon
subclass of: SO_0000010

105094304
type: Gene
SIO_000068: ncbigene

position:265168:-1
position: 265168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273060:-1
position: 273060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:265168-273060:-1:exon

THAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: THAP1
product: THAP domain containing 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010986306.2
SIO_010081: THAP1
subclass of: SO_0000673
so part of: THAP1
location: complement(join(265168..268259,268917..269112,272759..273060))
location: region:265168-273060:-1
so has part: feature:272759-273060:-1:exon
so has part: feature:268917-269112:-1:exon
so has part: feature:265168-268259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:272759-273060:-1:exon

position:272759:-1
position: 272759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:268917-269112:-1:exon

position:268917:-1
position: 268917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:269112:-1
position: 269112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:265168-268259:-1:exon

position:268259:-1
position: 268259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

THAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: THAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: THAP domain-containing protein 1
translation: MVQSCSAYGCKNRYDKDKPVSFHKFPLTRPSLCKKWEAAVRRKNFKPTKYSSICSEHFTPDCFKRECNNKLLKENAVPTIFLCTEPHDKKEDPEPPEQQPPPPLSPPISQVDAAIGLLMPPLQTPDNLSVFCDHNYTVEDTMHQRKRIHQLEQQVEKLRKKLKTAQQRCRRQERQLEKLKEVAHFQKEKDDVSERGYVILPNDYFEIVEVPA
SIO_010081: THAP1
subclass of: SO_0000673
so part of: THAP1
location: complement(join(267888..268259,268917..269112,272759..272829))
location: region:267888-272829:-1
so has part: feature:272759-272829:-1:exon
so has part: feature:268917-269112:-1:exon
so has part: feature:267888-268259:-1:exon

XP_010984608.1
type: Protein
SIO_000068: ncbiprotein

position:267888:-1
position: 267888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272829:-1
position: 272829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:272759-272829:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:268917-269112:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:267888-268259:-1:exon

LOC105094305
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105094305
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 273005..274628
location: region:273005-274628:1
so has part: feature:273005-274628:1:exon
subclass of: SO_0000011

105094305
type: Gene
SIO_000068: ncbigene

position:273005:1
position: 273005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274628:1
position: 274628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:273005-274628:1:exon

LOC105094305
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105094305
product: uncharacterized LOC105094305
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_837645.2
SIO_010081: LOC105094305
subclass of: SO_0000673
so part of: LOC105094305
location: join(273005..273117,274059..274131,274228..274628)
location: region:273005-274628:1
so has part: feature:273005-273117:1:exon
so has part: feature:274059-274131:1:exon
so has part: feature:274228-274628:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:273005-273117:1:exon

position:273117:1
position: 273117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:274059-274131:1:exon

position:274059:1
position: 274059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:274131:1
position: 274131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:274228-274628:1:exon

position:274228:1
position: 274228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF170
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(277549..307208)
location: region:277549-307208:-1
so has part: feature:277549-307208:-1:exon
subclass of: SO_0000010

105094302
type: Gene
SIO_000068: ncbigene

position:277549:-1
position: 277549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307208:-1
position: 307208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:277549-307208:-1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RNF170
product: ring finger protein 170, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031439976.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(277549..280371,282619..282729,284934..285007,289369..289477,291905..291980,301004..301147,307107..307208))
location: region:277549-307208:-1
so has part: feature:307107-307208:-1:exon
so has part: feature:301004-301147:-1:exon
so has part: feature:291905-291980:-1:exon
so has part: feature:289369-289477:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:277549-280371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307107-307208:-1:exon

position:307107:-1
position: 307107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301004-301147:-1:exon

position:301004:-1
position: 301004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301147:-1
position: 301147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:291905-291980:-1:exon

position:291905:-1
position: 291905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291980:-1
position: 291980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:289369-289477:-1:exon

position:289369:-1
position: 289369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:289477:-1
position: 289477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:284934-285007:-1:exon

position:284934:-1
position: 284934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:285007:-1
position: 285007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:282619-282729:-1:exon

position:282619:-1
position: 282619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:282729:-1
position: 282729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277549-280371:-1:exon

position:280371:-1
position: 280371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RNF170
product: ring finger protein 170, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_031439974.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(277549..280371,282619..282729,284934..285007,289369..289477,291905..291980,301004..301147,301986..302096,307107..307142))
location: region:277549-307142:-1
so has part: feature:307107-307142:-1:exon
so has part: feature:301986-302096:-1:exon
so has part: feature:301004-301147:-1:exon
so has part: feature:291905-291980:-1:exon
so has part: feature:289369-289477:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:277549-280371:-1:exon

position:307142:-1
position: 307142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307107-307142:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:301986-302096:-1:exon

position:301986:-1
position: 301986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:302096:-1
position: 302096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:301004-301147:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291905-291980:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:289369-289477:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:284934-285007:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:282619-282729:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277549-280371:-1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RNF170
product: ring finger protein 170, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_031439975.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(277549..280371,282619..282729,284934..285007,289369..289477,291905..291980,301004..301147,301839..301914))
location: region:277549-301914:-1
so has part: feature:301839-301914:-1:exon
so has part: feature:301004-301147:-1:exon
so has part: feature:291905-291980:-1:exon
so has part: feature:289369-289477:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:277549-280371:-1:exon

position:301914:-1
position: 301914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301839-301914:-1:exon

position:301839:-1
position: 301839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:301004-301147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:291905-291980:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:289369-289477:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:284934-285007:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:282619-282729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277549-280371:-1:exon

RNF170
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RNF170
product: ring finger protein 170, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_031439977.1
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(277549..280371,282619..282729,284934..285007,289369..289477,291905..291980,301078..301147))
location: region:277549-301147:-1
so has part: feature:301078-301147:-1:exon
so has part: feature:291905-291980:-1:exon
so has part: feature:289369-289477:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:277549-280371:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:301078-301147:-1:exon

position:301078:-1
position: 301078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:291905-291980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289369-289477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284934-285007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282619-282729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277549-280371:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARHQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(280102..280371,282619..282729,284934..285007,289369..289477,291905..291980,301004..301140))
location: region:280102-301140:-1
so has part: feature:301004-301140:-1:exon
so has part: feature:291905-291980:-1:exon
so has part: feature:289369-289477:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:280102-280371:-1:exon

XP_031295834.1
type: Protein
SIO_000068: ncbiprotein

position:280102:-1
position: 280102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301140:-1
position: 301140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:301004-301140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291905-291980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289369-289477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284934-285007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282619-282729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280102-280371:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARHQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(280102..280371,282619..282729,284934..285007,289369..289477,291905..291980,301004..301140))
location: region:280102-301140:-1
so has part: feature:301004-301140:-1:exon
so has part: feature:291905-291980:-1:exon
so has part: feature:289369-289477:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:280102-280371:-1:exon

XP_031295835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301004-301140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291905-291980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289369-289477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284934-285007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282619-282729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280102-280371:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X1
translation: MAKYQGEVQSLKLDDDSVIEGVSDQVLVAVVVSFALIATLVYALFRNAHQNIHPENQELVRVLREQLQTEQDAPAAARHQFYTDMYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(280102..280371,282619..282729,284934..285007,289369..289477,291905..291980,301004..301140))
location: region:280102-301140:-1
so has part: feature:301004-301140:-1:exon
so has part: feature:291905-291980:-1:exon
so has part: feature:289369-289477:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:280102-280371:-1:exon

XP_031295836.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:301004-301140:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:291905-291980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:289369-289477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:284934-285007:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:282619-282729:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:280102-280371:-1:exon

RNF170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RNF170
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase RNF170 isoform X2
translation: MYCPICLHQASLPVETNCGHLFCGTCIVAYWRYGSWLGAISCPICRQTVTLLLTVFSENDQSQDVVSLHQDINDYNRRFSGQPRSIMERIMDLPTLLRHAFREMFSVGGLFWMFRIRIILCLMGAFFYLISPLDFVPEALFGILGFLDDFFVIFLLLIYISIMYREVITQRLNR
SIO_010081: RNF170
subclass of: SO_0000673
so part of: RNF170
location: complement(join(280102..280371,282619..282729,284934..285007,289369..289438))
location: region:280102-289438:-1
so has part: feature:289369-289438:-1:exon
so has part: feature:284934-285007:-1:exon
so has part: feature:282619-282729:-1:exon
so has part: feature:280102-280371:-1:exon

XP_031295837.1
type: Protein
SIO_000068: ncbiprotein

position:289438:-1
position: 289438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:289369-289438:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284934-285007:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:282619-282729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:280102-280371:-1:exon

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(299099..299171)
location: region:299099-299171:-1
so has part: feature:299099-299171:-1:exon
subclass of: SO_0000663

116149280
type: Gene
SIO_000068: ncbigene

position:299099:-1
position: 299099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299171:-1
position: 299171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:299099-299171:-1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(299136..299138),aa:Gly,seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: complement(299099..299171)
location: region:299099-299171:-1
so has part: feature:299099-299171:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:299099-299171:-1:exon

HOOK3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 307009..401074
location: region:307009-401074:1
so has part: feature:307009-401074:1:exon
subclass of: SO_0000010

105094301
type: Gene
SIO_000068: ncbigene

position:307009:1
position: 307009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:401074:1
position: 401074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307009-401074:1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031439970.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307009..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,380201..380206,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..391591,393248..401074)
location: region:307009-401074:1
so has part: feature:307009-307725:1:exon
so has part: feature:314515-314600:1:exon
so has part: feature:330552-330624:1:exon
so has part: feature:333817-333867:1:exon
so has part: feature:335439-335571:1:exon
so has part: feature:339523-339590:1:exon
so has part: feature:346809-346871:1:exon
so has part: feature:348288-348371:1:exon
so has part: feature:353692-353855:1:exon
so has part: feature:357723-357863:1:exon
so has part: feature:360077-360278:1:exon
so has part: feature:364418-364528:1:exon
so has part: feature:365364-365451:1:exon
so has part: feature:369601-369670:1:exon
so has part: feature:372483-372623:1:exon
so has part: feature:377148-377235:1:exon
so has part: feature:380201-380206:1:exon
so has part: feature:381711-381745:1:exon
so has part: feature:385313-385395:1:exon
so has part: feature:386421-386521:1:exon
so has part: feature:388076-388180:1:exon
so has part: feature:388619-388690:1:exon
so has part: feature:391455-391591:1:exon
so has part: feature:393248-401074:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:307009-307725:1:exon

position:307725:1
position: 307725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:314515-314600:1:exon

position:314515:1
position: 314515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314600:1
position: 314600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:330552-330624:1:exon

position:330552:1
position: 330552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330624:1
position: 330624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

position:333817:1
position: 333817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:333867:1
position: 333867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

position:335439:1
position: 335439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335571:1
position: 335571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

position:339523:1
position: 339523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:339590:1
position: 339590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:346809-346871:1:exon

position:346809:1
position: 346809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:346871:1
position: 346871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

position:348288:1
position: 348288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:348371:1
position: 348371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:353692-353855:1:exon

position:353692:1
position: 353692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353855:1
position: 353855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

position:357723:1
position: 357723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357863:1
position: 357863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

position:360077:1
position: 360077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360278:1
position: 360278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:364418-364528:1:exon

position:364418:1
position: 364418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:364528:1
position: 364528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

position:365364:1
position: 365364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365451:1
position: 365451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

position:369601:1
position: 369601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:369670:1
position: 369670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

position:372483:1
position: 372483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372623:1
position: 372623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

position:377148:1
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position:377235:1
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urn:…
SIO_000300: 17
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reference: sequence
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position:380206:1
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urn:…
SIO_000300: 18
SIO_000628: feature:381711-381745:1:exon

position:381711:1
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reference: sequence
type: ForwardStrandPosition
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position:381745:1
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urn:…
SIO_000300: 19
SIO_000628: feature:385313-385395:1:exon

position:385313:1
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reference: sequence
type: ForwardStrandPosition
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position:385395:1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:386421-386521:1:exon

position:386421:1
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type: ForwardStrandPosition
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position:386521:1
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urn:…
SIO_000300: 21
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reference: sequence
type: ForwardStrandPosition
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position:388180:1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:388619-388690:1:exon

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reference: sequence
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position:388690:1
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urn:…
SIO_000300: 23
SIO_000628: feature:391455-391591:1:exon

position:391455:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391591:1
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urn:…
SIO_000300: 24
SIO_000628: feature:393248-401074:1:exon

position:393248:1
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reference: sequence
type: ForwardStrandPosition
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HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031439969.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307009..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,380201..380206,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..391591,395507..401074)
location: region:307009-401074:1
so has part: feature:307009-307725:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:307009-307725:1:exon

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SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

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SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

urn:…
SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

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SIO_000300: 9
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SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

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SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

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SIO_000300: 12
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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380201-380206:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381711-381745:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:385313-385395:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:386421-386521:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:388076-388180:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:388619-388690:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391455-391591:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:395507-401074:1:exon

position:395507:1
position: 395507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_031439972.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307009..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..401074)
location: region:307009-401074:1
so has part: feature:307009-307725:1:exon
so has part: feature:314515-314600:1:exon
so has part: feature:330552-330624:1:exon
so has part: feature:333817-333867:1:exon
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so has part: feature:388619-388690:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:307009-307725:1:exon

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SIO_000300: 2
SIO_000628: feature:314515-314600:1:exon

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SIO_000300: 3
SIO_000628: feature:330552-330624:1:exon

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SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

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SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

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SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

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SIO_000300: 9
SIO_000628: feature:353692-353855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

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SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:364418-364528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:381711-381745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385313-385395:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:386421-386521:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388076-388180:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:388619-388690:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391455-401074:1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031439971.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307009..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..391591,395507..401074)
location: region:307009-401074:1
so has part: feature:307009-307725:1:exon
so has part: feature:314515-314600:1:exon
so has part: feature:330552-330624:1:exon
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so has part: feature:335439-335571:1:exon
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urn:…
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SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

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SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

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SIO_000628: feature:346809-346871:1:exon

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SIO_000628: feature:353692-353855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

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SIO_000628: feature:364418-364528:1:exon

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SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

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SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

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SIO_000628: feature:381711-381745:1:exon

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SIO_000300: 18
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SIO_000300: 19
SIO_000628: feature:386421-386521:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388076-388180:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:388619-388690:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391455-391591:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:395507-401074:1:exon

HOOK3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HOOK3
product: hook microtubule tethering protein 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031439973.1
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307009..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,379950..380174)
location: region:307009-380174:1
so has part: feature:307009-307725:1:exon
so has part: feature:314515-314600:1:exon
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so has part: feature:377148-377235:1:exon
so has part: feature:379950-380174:1:exon

position:380174:1
position: 380174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307009-307725:1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:369601-369670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:379950-380174:1:exon

position:379950:1
position: 379950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X1
translation: MPPRGRPGGRLDPAAPPMPGPAGARPRTSARGGHLASSGDRGHRLFPGRPHSRRPLAAASGLGARARRTAHCRASVRARRGPGGGFGRAGAGGKRSGPAGRGAVLRSAGGRGRARPGSRAAAGQRGGVRGAGAGGRPRGGAARGGGGGGGARSRGAGGGGGGGGGGAPVTLREPLPRRTESAAGRRTGGRDPRTQPQAEPQASWRGGAPRAPAGRCVNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDAISVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARVSTQ
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307024..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,380201..380206,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..391591,395507..395522)
location: region:307024-395522:1
so has part: feature:307024-307725:1:exon
so has part: feature:314515-314600:1:exon
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so has part: feature:381711-381745:1:exon
so has part: feature:385313-385395:1:exon
so has part: feature:386421-386521:1:exon
so has part: feature:388076-388180:1:exon
so has part: feature:388619-388690:1:exon
so has part: feature:391455-391591:1:exon
so has part: feature:395507-395522:1:exon

XP_031295829.1
type: Protein
SIO_000068: ncbiprotein

position:307024:1
position: 307024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:395522:1
position: 395522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307024-307725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314515-314600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330552-330624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346809-346871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353692-353855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:364418-364528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380201-380206:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381711-381745:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:385313-385395:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:386421-386521:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:388076-388180:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:388619-388690:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391455-391591:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:395507-395522:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X3
translation: MPPRGRPGGRLDPAAPPMPGPAGARPRTSARGGHLASSGDRGHRLFPGRPHSRRPLAAASGLGARARRTAHCRASVRARRGPGGGFGRAGAGGKRSGPAGRGAVLRSAGGRGRARPGSRAAAGQRGGVRGAGAGGRPRGGAARGGGGGGGARSRGAGGGGGGGGGGAPVTLREPLPRRTESAAGRRTGGRDPRTQPQAEPQASWRGGAPRAPAGRCVNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARVSTQ
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307024..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..391591,395507..395522)
location: region:307024-395522:1
so has part: feature:307024-307725:1:exon
so has part: feature:314515-314600:1:exon
so has part: feature:330552-330624:1:exon
so has part: feature:333817-333867:1:exon
so has part: feature:335439-335571:1:exon
so has part: feature:339523-339590:1:exon
so has part: feature:346809-346871:1:exon
so has part: feature:348288-348371:1:exon
so has part: feature:353692-353855:1:exon
so has part: feature:357723-357863:1:exon
so has part: feature:360077-360278:1:exon
so has part: feature:364418-364528:1:exon
so has part: feature:365364-365451:1:exon
so has part: feature:369601-369670:1:exon
so has part: feature:372483-372623:1:exon
so has part: feature:377148-377235:1:exon
so has part: feature:381711-381745:1:exon
so has part: feature:385313-385395:1:exon
so has part: feature:386421-386521:1:exon
so has part: feature:388076-388180:1:exon
so has part: feature:388619-388690:1:exon
so has part: feature:391455-391591:1:exon
so has part: feature:395507-395522:1:exon

XP_031295831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:307024-307725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314515-314600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330552-330624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346809-346871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353692-353855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:364418-364528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:381711-381745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385313-385395:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:386421-386521:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388076-388180:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:388619-388690:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391455-391591:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:395507-395522:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X2
translation: MPPRGRPGGRLDPAAPPMPGPAGARPRTSARGGHLASSGDRGHRLFPGRPHSRRPLAAASGLGARARRTAHCRASVRARRGPGGGFGRAGAGGKRSGPAGRGAVLRSAGGRGRARPGSRAAAGQRGGVRGAGAGGRPRGGAARGGGGGGGARSRGAGGGGGGGGGGAPVTLREPLPRRTESAAGRRTGGRDPRTQPQAEPQASWRGGAPRAPAGRCVNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDAISVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATARNHT
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307024..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,380201..380206,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..391591,393248..393260)
location: region:307024-393260:1
so has part: feature:307024-307725:1:exon
so has part: feature:314515-314600:1:exon
so has part: feature:330552-330624:1:exon
so has part: feature:333817-333867:1:exon
so has part: feature:335439-335571:1:exon
so has part: feature:339523-339590:1:exon
so has part: feature:346809-346871:1:exon
so has part: feature:348288-348371:1:exon
so has part: feature:353692-353855:1:exon
so has part: feature:357723-357863:1:exon
so has part: feature:360077-360278:1:exon
so has part: feature:364418-364528:1:exon
so has part: feature:365364-365451:1:exon
so has part: feature:369601-369670:1:exon
so has part: feature:372483-372623:1:exon
so has part: feature:377148-377235:1:exon
so has part: feature:380201-380206:1:exon
so has part: feature:381711-381745:1:exon
so has part: feature:385313-385395:1:exon
so has part: feature:386421-386521:1:exon
so has part: feature:388076-388180:1:exon
so has part: feature:388619-388690:1:exon
so has part: feature:391455-391591:1:exon
so has part: feature:393248-393260:1:exon

XP_031295830.1
type: Protein
SIO_000068: ncbiprotein

position:393260:1
position: 393260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307024-307725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314515-314600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330552-330624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346809-346871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353692-353855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:364418-364528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:380201-380206:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:381711-381745:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:385313-385395:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:386421-386521:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:388076-388180:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:388619-388690:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:391455-391591:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:393248-393260:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X4
translation: MPPRGRPGGRLDPAAPPMPGPAGARPRTSARGGHLASSGDRGHRLFPGRPHSRRPLAAASGLGARARRTAHCRASVRARRGPGGGFGRAGAGGKRSGPAGRGAVLRSAGGRGRARPGSRAAAGQRGGVRGAGAGGRPRGGAARGGGGGGGARSRGAGGGGGGGGGGAPVTLREPLPRRTESAAGRRTGGRDPRTQPQAEPQASWRGGAPRAPAGRCVNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDSVLLKKKLEEHLEKLHEANNELQKKRAIIEDLEPRFNNSSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYNMGMTLHKKAAEDRLASTGSGQSFLARQRQATSTRRSYPGHVQPATAR
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307024..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,381711..381745,385313..385395,386421..386521,388076..388180,388619..388690,391455..391595)
location: region:307024-391595:1
so has part: feature:307024-307725:1:exon
so has part: feature:314515-314600:1:exon
so has part: feature:330552-330624:1:exon
so has part: feature:333817-333867:1:exon
so has part: feature:335439-335571:1:exon
so has part: feature:339523-339590:1:exon
so has part: feature:346809-346871:1:exon
so has part: feature:348288-348371:1:exon
so has part: feature:353692-353855:1:exon
so has part: feature:357723-357863:1:exon
so has part: feature:360077-360278:1:exon
so has part: feature:364418-364528:1:exon
so has part: feature:365364-365451:1:exon
so has part: feature:369601-369670:1:exon
so has part: feature:372483-372623:1:exon
so has part: feature:377148-377235:1:exon
so has part: feature:381711-381745:1:exon
so has part: feature:385313-385395:1:exon
so has part: feature:386421-386521:1:exon
so has part: feature:388076-388180:1:exon
so has part: feature:388619-388690:1:exon
so has part: feature:391455-391595:1:exon

XP_031295832.1
type: Protein
SIO_000068: ncbiprotein

position:391595:1
position: 391595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307024-307725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314515-314600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330552-330624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346809-346871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353692-353855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:364418-364528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:381711-381745:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:385313-385395:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:386421-386521:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:388076-388180:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:388619-388690:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:391455-391595:1:exon

HOOK3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HOOK3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Hook homolog 3 isoform X5
translation: MPPRGRPGGRLDPAAPPMPGPAGARPRTSARGGHLASSGDRGHRLFPGRPHSRRPLAAASGLGARARRTAHCRASVRARRGPGGGFGRAGAGGKRSGPAGRGAVLRSAGGRGRARPGSRAAAGQRGGVRGAGAGGRPRGGAARGGGGGGGARSRGAGGGGGGGGGGAPVTLREPLPRRTESAAGRRTGGRDPRTQPQAEPQASWRGGAPRAPAGRCVNVESLERVELCESLLTWIQTFNVDAPCQTVEDLTNGVVMAQVLQKIDPAYFDENWLNRIKTEVGDNWRLKISNLKKILKGILDYNHEILGQQINDFTLPDVNLLGEHADAAELGRMLQLILGCAVNCEQKQEYIQAIMMMEESVQHVVMTAIQELMSKESPVSAGNDAYVDLDRQLKKTSEELNEALSAKEEIAQRCHELDLQVAALQEEKSSLLAENQVLMERLNQSDSIEDPNSPAGRRHLQLQTQLEQLQEETFRLEAAKDDYRIRCEELEKEISELRQQNDELTTLADDAQSLKDEIDVLRHSSDKVSKLEGQVESYKKKLEDLGDLRRQVKLLEEKNTMYMQNTVSLEEELRKANAARSQLETYKRQVVELQNRLSEESKKADKLDFEYKRLKEKVDSLQKEKDRLRTERDSLKETIEELRCVQAQEGQLTTQGLMPLGSQESSDSLAAEIVTPEIREKLIRLQHENKMLKINQEGSDNEKIALLQSLLDDANLRKNELETENRLVNQRLLEVQSQVEELQKSLQDQGSKAEDRGSRKALLHPVLWII
SIO_010081: HOOK3
subclass of: SO_0000673
so part of: HOOK3
location: join(307024..307725,314515..314600,330552..330624,333817..333867,335439..335571,339523..339590,346809..346871,348288..348371,353692..353855,357723..357863,360077..360278,364418..364528,365364..365451,369601..369670,372483..372623,377148..377235,379950..379997)
location: region:307024-379997:1
so has part: feature:307024-307725:1:exon
so has part: feature:314515-314600:1:exon
so has part: feature:330552-330624:1:exon
so has part: feature:333817-333867:1:exon
so has part: feature:335439-335571:1:exon
so has part: feature:339523-339590:1:exon
so has part: feature:346809-346871:1:exon
so has part: feature:348288-348371:1:exon
so has part: feature:353692-353855:1:exon
so has part: feature:357723-357863:1:exon
so has part: feature:360077-360278:1:exon
so has part: feature:364418-364528:1:exon
so has part: feature:365364-365451:1:exon
so has part: feature:369601-369670:1:exon
so has part: feature:372483-372623:1:exon
so has part: feature:377148-377235:1:exon
so has part: feature:379950-379997:1:exon

XP_031295833.1
type: Protein
SIO_000068: ncbiprotein

position:379997:1
position: 379997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:307024-307725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314515-314600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:330552-330624:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333817-333867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:335439-335571:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:339523-339590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346809-346871:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:348288-348371:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:353692-353855:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:357723-357863:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:360077-360278:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:364418-364528:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:365364-365451:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:369601-369670:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:372483-372623:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:377148-377235:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:379950-379997:1:exon

FNTA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FNTA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 410476..431057
location: region:410476-431057:1
so has part: feature:410476-431057:1:exon
subclass of: SO_0000010

105094300
type: Gene
SIO_000068: ncbigene

position:410476:1
position: 410476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:431057:1
position: 431057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410476-431057:1:exon

FNTA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FNTA
product: farnesyltransferase, CAAX box, alpha
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_031439978.1
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: join(410476..410678,412691..412776,418617..418731,422559..422663,425466..425592,427001..427149,429005..429067,429963..430134,430416..431057)
location: region:410476-431057:1
so has part: feature:410476-410678:1:exon
so has part: feature:412691-412776:1:exon
so has part: feature:418617-418731:1:exon
so has part: feature:422559-422663:1:exon
so has part: feature:425466-425592:1:exon
so has part: feature:427001-427149:1:exon
so has part: feature:429005-429067:1:exon
so has part: feature:429963-430134:1:exon
so has part: feature:430416-431057:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:410476-410678:1:exon

position:410678:1
position: 410678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:412691-412776:1:exon

position:412691:1
position: 412691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:412776:1
position: 412776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:418617-418731:1:exon

position:418617:1
position: 418617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:418731:1
position: 418731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:422559-422663:1:exon

position:422559:1
position: 422559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:422663:1
position: 422663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:425466-425592:1:exon

position:425466:1
position: 425466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:425592:1
position: 425592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:427001-427149:1:exon

position:427001:1
position: 427001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:427149:1
position: 427149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:429005-429067:1:exon

position:429005:1
position: 429005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429067:1
position: 429067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:429963-430134:1:exon

position:429963:1
position: 429963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430134:1
position: 430134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:430416-431057:1:exon

position:430416:1
position: 430416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FNTA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FNTA
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
translation: MAAADGVGEAAQDGEAGQPEPGPPEPPPPQPPKEEAVASPMTTXFLSLDSPSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIADVLNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQRYFVISNTTGYNDPAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLSQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILSKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSTERDPPPNAQQ
SIO_010081: FNTA
subclass of: SO_0000673
so part of: FNTA
location: join(410511..410678,412691..412776,418617..418731,422559..422663,425466..425592,427001..427149,429005..429067,429963..430134,430416..430538)
location: region:410511-430538:1
so has part: feature:410511-410678:1:exon
so has part: feature:412691-412776:1:exon
so has part: feature:418617-418731:1:exon
so has part: feature:422559-422663:1:exon
so has part: feature:425466-425592:1:exon
so has part: feature:427001-427149:1:exon
so has part: feature:429005-429067:1:exon
so has part: feature:429963-430134:1:exon
so has part: feature:430416-430538:1:exon

XP_031295838.1
type: Protein
SIO_000068: ncbiprotein

position:410511:1
position: 410511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:430538:1
position: 430538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:410511-410678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:412691-412776:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:418617-418731:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:422559-422663:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:425466-425592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:427001-427149:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:429005-429067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:429963-430134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:430416-430538:1:exon

LOC116149242
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149242
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 435758..438436
location: region:435758-438436:1
so has part: feature:435758-438436:1:exon

116149242
type: Gene
SIO_000068: ncbigene

position:435758:1
position: 435758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438436:1
position: 438436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435758-438436:1:exon

LOC116149242
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149242
subclass of: SO_0000673
so part of: LOC116149242
location: 435758..435781
location: region:435758-435781:1
so has part: feature:435758-435781:1:exon

position:435781:1
position: 435781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435758-435781:1:exon

LOC116149242
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149242
subclass of: SO_0000673
so part of: LOC116149242
location: 436786..437088
location: region:436786-437088:1
so has part: feature:436786-437088:1:exon

position:436786:1
position: 436786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437088:1
position: 437088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:436786-437088:1:exon

LOC116149242
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149242
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149242
subclass of: SO_0000673
so part of: LOC116149242
location: 437578..438436
location: region:437578-438436:1
so has part: feature:437578-438436:1:exon

position:437578:1
position: 437578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437578-438436:1:exon

HGSNAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 438713..491676
location: region:438713-491676:1
so has part: feature:438713-491676:1:exon
subclass of: SO_0000010

105094298
type: Gene
SIO_000068: ncbigene

position:438713:1
position: 438713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:491676:1
position: 491676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438713-491676:1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031439982.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(438713..438783,441513..441602,467581..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..491676)
location: region:438713-491676:1
so has part: feature:438713-438783:1:exon
so has part: feature:441513-441602:1:exon
so has part: feature:467581-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-491676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:438713-438783:1:exon

position:438783:1
position: 438783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441513-441602:1:exon

position:441513:1
position: 441513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441602:1
position: 441602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:467581-467696:1:exon

position:467581:1
position: 467581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:467696:1
position: 467696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:471880-472016:1:exon

position:471880:1
position: 471880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472016:1
position: 472016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:472236-472357:1:exon

position:472236:1
position: 472236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472357:1
position: 472357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:473250-473319:1:exon

position:473250:1
position: 473250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:473319:1
position: 473319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:476838-476907:1:exon

position:476838:1
position: 476838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476907:1
position: 476907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:477679-477776:1:exon

position:477679:1
position: 477679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:477776:1
position: 477776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:479208-479284:1:exon

position:479208:1
position: 479208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479284:1
position: 479284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:479878-479908:1:exon

position:479878:1
position: 479878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479908:1
position: 479908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:481510-481670:1:exon

position:481510:1
position: 481510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481670:1
position: 481670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:482419-482534:1:exon

position:482419:1
position: 482419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:482534:1
position: 482534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:484726-484847:1:exon

position:484726:1
position: 484726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:484847:1
position: 484847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:485216-485342:1:exon

position:485216:1
position: 485216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:485342:1
position: 485342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:486354-486440:1:exon

position:486354:1
position: 486354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:486440:1
position: 486440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:488473-488550:1:exon

position:488473:1
position: 488473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:488550:1
position: 488550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:489017-489087:1:exon

position:489017:1
position: 489017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489087:1
position: 489087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:489176-489288:1:exon

position:489176:1
position: 489176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489288:1
position: 489288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:489471-491676:1:exon

position:489471:1
position: 489471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031439980.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(440204..440410,441513..441602,467581..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..489666,489834..491676)
location: region:440204-491676:1
so has part: feature:440204-440410:1:exon
so has part: feature:441513-441602:1:exon
so has part: feature:467581-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-489666:1:exon
so has part: feature:489834-491676:1:exon

position:440204:1
position: 440204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440204-440410:1:exon

position:440410:1
position: 440410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:441513-441602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467581-467696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489471-489666:1:exon

position:489666:1
position: 489666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:489834-491676:1:exon

position:489834:1
position: 489834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031439979.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(440205..440410,441513..441602,467581..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..491676)
location: region:440205-491676:1
so has part: feature:440205-440410:1:exon
so has part: feature:441513-441602:1:exon
so has part: feature:467581-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-491676:1:exon

position:440205:1
position: 440205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440205-440410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441513-441602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467581-467696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489471-491676:1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X1
translation: MEDTRVPTPGKRKDPTCCGKWIRKEEELGAYVGKCCGSPDVDKKRHVELKMDQALLLIHNELPGTNLTVYWNYDRCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKITWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(440383..440410,441513..441602,467581..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..489652)
location: region:440383-489652:1
so has part: feature:440383-440410:1:exon
so has part: feature:441513-441602:1:exon
so has part: feature:467581-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-489652:1:exon

XP_031295839.1
type: Protein
SIO_000068: ncbiprotein

position:440383:1
position: 440383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:489652:1
position: 489652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440383-440410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441513-441602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467581-467696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489471-489652:1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X1
translation: MEDTRVPTPGKRKDPTCCGKWIRKEEELGAYVGKCCGSPDVDKKRHVELKMDQALLLIHNELPGTNLTVYWNYDRCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKITWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(440383..440410,441513..441602,467581..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..489652)
location: region:440383-489652:1
so has part: feature:440383-440410:1:exon
so has part: feature:441513-441602:1:exon
so has part: feature:467581-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-489652:1:exon

XP_031295840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:440383-440410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:441513-441602:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:467581-467696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:489471-489652:1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_031439983.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(446099..446226,467581..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..491676)
location: region:446099-491676:1
so has part: feature:446099-446226:1:exon
so has part: feature:467581-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-491676:1:exon

position:446099:1
position: 446099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446099-446226:1:exon

position:446226:1
position: 446226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467581-467696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489471-491676:1:exon

HGSNAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: HGSNAT
product: heparan-alpha-glucosaminide N-acetyltransferase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031439981.1
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(462479..462704,467581..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..491676)
location: region:462479-491676:1
so has part: feature:462479-462704:1:exon
so has part: feature:467581-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-491676:1:exon

position:462479:1
position: 462479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462479-462704:1:exon

position:462704:1
position: 462704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:467581-467696:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:489471-491676:1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X2
translation: MDQALLLIHNELPGTNLTVYWNYDRCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKITWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(467613..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..489652)
location: region:467613-489652:1
so has part: feature:467613-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-489652:1:exon

XP_031295841.1
type: Protein
SIO_000068: ncbiprotein

position:467613:1
position: 467613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:467613-467696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489471-489652:1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X2
translation: MDQALLLIHNELPGTNLTVYWNYDRCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKITWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(467613..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..489652)
location: region:467613-489652:1
so has part: feature:467613-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-489652:1:exon

XP_031295842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467613-467696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489471-489652:1:exon

HGSNAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: HGSNAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heparan-alpha-glucosaminide N-acetyltransferase isoform X2
translation: MDQALLLIHNELPGTNLTVYWNYDRCYQCLLQVLVRASRGGKPGKPSVAAVAVGTQHVSILRLNDTVEDKELCRLEYKFGEFGNYSLLVKHTPDGASEAACDLVVNEKPVDSDLPVTVAFLVGLALVIAVSFLKFLWSLEDFNNWISKAINSRETDRLINSELGSPSRAGDPQPEAWRPSAAPLRLRCLDTFRGMALTIMVFVNYGGGRYWYFKHSSWNGLTVADLVFPWFVFIMGSSIFLSMTSTLQRGCSKFRLLGKITWRSFLLLCIGIVVVNPNYCLGPLSWEEARIPGVLQRLGVTYFVVAVLELLFFKPVPESCASERSCFSLLDVVSSWPQWLVIMALEGIWLALTFFLPVPGCPTGYLGPGGIGDLGKYPNCTGGAAGYIDRLLLGDHHIYQHPSSAVLYHTDVAYDPEGILGTINSIVMAFLGVQAGKILLYYKDRTKDILVRFTAWCCLLGLISVALTKASENEGFIPVNKNLWSISYVTTLSAFAFFILLVLYPVVDVHGLWTGTPFFYPGMNSILVYVGHEVFENYFPFQWRLGDSQSHKEHLVQNLVATALWVLIAYILYKKKVFWKI
SIO_010081: HGSNAT
subclass of: SO_0000673
so part of: HGSNAT
location: join(467613..467696,471880..472016,472236..472357,473250..473319,476838..476907,477679..477776,479208..479284,479878..479908,481510..481670,482419..482534,484726..484847,485216..485342,486354..486440,488473..488550,489017..489087,489176..489288,489471..489652)
location: region:467613-489652:1
so has part: feature:467613-467696:1:exon
so has part: feature:471880-472016:1:exon
so has part: feature:472236-472357:1:exon
so has part: feature:473250-473319:1:exon
so has part: feature:476838-476907:1:exon
so has part: feature:477679-477776:1:exon
so has part: feature:479208-479284:1:exon
so has part: feature:479878-479908:1:exon
so has part: feature:481510-481670:1:exon
so has part: feature:482419-482534:1:exon
so has part: feature:484726-484847:1:exon
so has part: feature:485216-485342:1:exon
so has part: feature:486354-486440:1:exon
so has part: feature:488473-488550:1:exon
so has part: feature:489017-489087:1:exon
so has part: feature:489176-489288:1:exon
so has part: feature:489471-489652:1:exon

XP_031295843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:467613-467696:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471880-472016:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472236-472357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:473250-473319:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:476838-476907:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477679-477776:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:479208-479284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:479878-479908:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:481510-481670:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482419-482534:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:484726-484847:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:485216-485342:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:486354-486440:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:488473-488550:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:489017-489087:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:489176-489288:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:489471-489652:1:exon

INTS10
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(496223..529129)
location: region:496223-529129:-1
so has part: feature:496223-529129:-1:exon
subclass of: SO_0000010

105094296
type: Gene
SIO_000068: ncbigene

position:496223:-1
position: 496223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529129:-1
position: 529129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:496223-529129:-1:exon

INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031439984.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496223..496676,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529129))
location: region:496223-529129:-1
so has part: feature:528899-529129:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:498689-498766:-1:exon
so has part: feature:496223-496676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:528899-529129:-1:exon

position:528899:-1
position: 528899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

position:528085:-1
position: 528085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528152:-1
position: 528152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526747:-1:exon

position:526644:-1
position: 526644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:526747:-1
position: 526747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

position:525795:-1
position: 525795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525934:-1
position: 525934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

position:523497:-1
position: 523497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523578:-1
position: 523578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

position:522866:-1
position: 522866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:523006:-1
position: 523006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

position:522267:-1
position: 522267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:522438:-1
position: 522438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

position:521626:-1
position: 521626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:521795:-1
position: 521795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

position:520715:-1
position: 520715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:520848:-1
position: 520848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

position:513883:-1
position: 513883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:514036:-1
position: 514036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

position:512500:-1
position: 512500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512582:-1
position: 512582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

position:511635:-1
position: 511635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:511787:-1
position: 511787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

position:508587:-1
position: 508587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:508695:-1
position: 508695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

position:503462:-1
position: 503462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503541:-1
position: 503541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

position:502506:-1
position: 502506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502668:-1
position: 502668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

position:501464:-1
position: 501464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:501557:-1
position: 501557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:498689-498766:-1:exon

position:498689:-1
position: 498689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498766:-1
position: 498766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:496223-496676:-1:exon

position:496676:-1
position: 496676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_031439987.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496223..496676,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529128))
location: region:496223-529128:-1
so has part: feature:528899-529128:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:496223-496676:-1:exon

position:529128:-1
position: 529128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528899-529128:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031439988.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496223..496586,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529128))
location: region:496223-529128:-1
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position:496586:-1
position: 496586
reference: sequence
type: ReverseStrandPosition
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031439986.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496223..496586,498629..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529128))
location: region:496223-529128:-1
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reference: sequence
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urn:…
SIO_000300: 18
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031439991.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496223..496586,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529126))
location: region:496223-529126:-1
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031439990.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496223..496676,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526730,528085..528152,528899..528963))
location: region:496223-528963:-1
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031439985.1
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
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INTS10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS10
product: integrator complex subunit 10, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031439989.1
SIO_010081: INTS10
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SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498689-498766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496223-496676:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X8
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496586,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529027))
location: region:496430-529027:-1
so has part: feature:528899-529027:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:496430-496586:-1:exon

XP_031295851.1
type: Protein
SIO_000068: ncbiprotein

position:496430:-1
position: 496430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529027:-1
position: 529027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528899-529027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:496430-496586:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X4
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496676,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529027))
location: region:496430-529027:-1
so has part: feature:528899-529027:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:496430-496676:-1:exon

XP_031295847.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528899-529027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:496430-496676:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X5
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496586,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529027))
location: region:496430-529027:-1
so has part: feature:528899-529027:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:498689-498766:-1:exon
so has part: feature:496430-496586:-1:exon

XP_031295848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528899-529027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498689-498766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496430-496586:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X1
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496676,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529027))
location: region:496430-529027:-1
so has part: feature:528899-529027:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:498689-498766:-1:exon
so has part: feature:496430-496676:-1:exon

XP_031295844.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528899-529027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498689-498766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496430-496676:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X3
translation: MSAQGDCEFLVQRARELVQQDLWAAKAWLITARSLYPADFNIQYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRYHVATPAHSVLFVRLFSCPWHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496586,498629..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528899..529027))
location: region:496430-529027:-1
so has part: feature:528899-529027:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:498629-498766:-1:exon
so has part: feature:496430-496586:-1:exon

XP_031295846.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:528899-529027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498629-498766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496430-496586:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X2
translation: MNEPWRARAQWGGRRRQRCAVALYGVNALRGQSAQSYEMYSIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496676,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526747,528085..528152,528449..528556))
location: region:496430-528556:-1
so has part: feature:528449-528556:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526747:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:498689-498766:-1:exon
so has part: feature:496430-496676:-1:exon

XP_031295845.1
type: Protein
SIO_000068: ncbiprotein

position:528556:-1
position: 528556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528449-528556:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526747:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498689-498766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496430-496676:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X6
translation: MPYVGNQHRVMRCTASSAMRSGRPLPGDCSTTYQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496676,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526730,528085..528152,528449..528477))
location: region:496430-528477:-1
so has part: feature:528449-528477:-1:exon
so has part: feature:528085-528152:-1:exon
so has part: feature:526644-526730:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:498689-498766:-1:exon
so has part: feature:496430-496676:-1:exon

XP_031295849.1
type: Protein
SIO_000068: ncbiprotein

position:528477:-1
position: 528477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528449-528477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528085-528152:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526644-526730:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:498689-498766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:496430-496676:-1:exon

INTS10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 10 isoform X7
translation: MRCTASSAMRSGRPLPGDCSTTYQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQESPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQTENQHQGAQETSDLMSPSKRSSQKYIIEGLTEKSSQIVDPWERLFKILNVVGMRCEWQMDKGRRSYGDILHRMKDLCRYMNNFDNEAHAKYKNQVVYSTMLVFFKNAFQYVSSIQPSLFQGPNAPSQVPLVLLEDVSNVYGDVEVDRNKHIHKKRKLAEGREKPMSSDDEDCPAKGRNRHIVVNKAELANSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLNDMIIYQGQYKKAIASLHHLAALQGSVPQPQISGQGTLEHQRALIQLATCHFALGEYRTTCEKVLDLMCHMVLPIQDGGKPQEEPSKVKPKFRKGSDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGETLFLKAVSKICQQGNFQYENFFNYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKPSSPPMGLLQQEFLPVLQPSIQTADRIWGRLDPAPEPRPGGLLTVPPVCLPVAAPRHHTVTRGITKGVKEDFRLAMERQVSRCGENLMLVLHRFCVNEKVLLLQTLA
SIO_010081: INTS10
subclass of: SO_0000673
so part of: INTS10
location: complement(join(496430..496676,498689..498766,501464..501557,502506..502668,503462..503541,508587..508695,511635..511787,512500..512582,513883..514036,520715..520848,521626..521795,522267..522438,522866..523006,523497..523578,525795..525934,526644..526730,528085..528151))
location: region:496430-528151:-1
so has part: feature:528085-528151:-1:exon
so has part: feature:526644-526730:-1:exon
so has part: feature:525795-525934:-1:exon
so has part: feature:523497-523578:-1:exon
so has part: feature:522866-523006:-1:exon
so has part: feature:522267-522438:-1:exon
so has part: feature:521626-521795:-1:exon
so has part: feature:520715-520848:-1:exon
so has part: feature:513883-514036:-1:exon
so has part: feature:512500-512582:-1:exon
so has part: feature:511635-511787:-1:exon
so has part: feature:508587-508695:-1:exon
so has part: feature:503462-503541:-1:exon
so has part: feature:502506-502668:-1:exon
so has part: feature:501464-501557:-1:exon
so has part: feature:498689-498766:-1:exon
so has part: feature:496430-496676:-1:exon

XP_031295850.1
type: Protein
SIO_000068: ncbiprotein

position:528151:-1
position: 528151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:528085-528151:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526644-526730:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:525795-525934:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:523497-523578:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:522866-523006:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:522267-522438:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:521626-521795:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:520715-520848:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:513883-514036:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:512500-512582:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:511635-511787:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:508587-508695:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:503462-503541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:502506-502668:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:501464-501557:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:498689-498766:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:496430-496676:-1:exon

TRNAT-GGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAT-GGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 541705..541776
location: region:541705-541776:1
so has part: feature:541705-541776:1:exon
subclass of: SO_0000663

116149275
type: Gene
SIO_000068: ncbigene

position:541705:1
position: 541705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541776:1
position: 541776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541705-541776:1:exon

TRNAT-GGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAT-GGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:541737..541739,aa:Thr,seq:ggt)
SIO_010081: TRNAT-GGU
subclass of: SO_0000673
so part of: TRNAT-GGU
location: 541705..541776
location: region:541705-541776:1
so has part: feature:541705-541776:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:541705-541776:1:exon

LOC116149088
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(556320..559476)
location: region:556320-559476:-1
so has part: feature:556320-559476:-1:exon
subclass of: SO_0000011

116149088
type: Gene
SIO_000068: ncbigene

position:556320:-1
position: 556320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559476:-1
position: 559476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:556320-559476:-1:exon

LOC116149088
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149088
product: uncharacterized LOC116149088
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004132698.1
SIO_010081: LOC116149088
subclass of: SO_0000673
so part of: LOC116149088
location: complement(join(556320..556542,557167..557321,559284..559476))
location: region:556320-559476:-1
so has part: feature:559284-559476:-1:exon
so has part: feature:557167-557321:-1:exon
so has part: feature:556320-556542:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:559284-559476:-1:exon

position:559284:-1
position: 559284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:557167-557321:-1:exon

position:557167:-1
position: 557167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557321:-1
position: 557321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:556320-556542:-1:exon

position:556542:-1
position: 556542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CSGALNACT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 677672..815909
location: region:677672-815909:1
so has part: feature:677672-815909:1:exon
subclass of: SO_0000010

105086444
type: Gene
SIO_000068: ncbigene

position:677672:1
position: 677672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:815909:1
position: 815909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:677672-815909:1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031439993.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(677672..677869,678864..678952,748230..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..815909)
location: region:677672-815909:1
so has part: feature:677672-677869:1:exon
so has part: feature:678864-678952:1:exon
so has part: feature:748230-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-815909:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:677672-677869:1:exon

position:677869:1
position: 677869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678864-678952:1:exon

position:678864:1
position: 678864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:678952:1
position: 678952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:748230-749118:1:exon

position:748230:1
position: 748230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:749118:1
position: 749118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:779655-779871:1:exon

position:779655:1
position: 779655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:779871:1
position: 779871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:793569-793670:1:exon

position:793569:1
position: 793569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793670:1
position: 793670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:805446-805624:1:exon

position:805446:1
position: 805446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805624:1
position: 805624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:806506-806600:1:exon

position:806506:1
position: 806506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806600:1
position: 806600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:813285-813366:1:exon

position:813285:1
position: 813285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813366:1
position: 813366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:814449-815909:1:exon

position:814449:1
position: 814449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_031439992.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(678282..678551,678864..678952,748230..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..815909)
location: region:678282-815909:1
so has part: feature:678282-678551:1:exon
so has part: feature:678864-678952:1:exon
so has part: feature:748230-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-815909:1:exon

position:678282:1
position: 678282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678282-678551:1:exon

position:678551:1
position: 678551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:678864-678952:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:748230-749118:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:779655-779871:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:793569-793670:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:805446-805624:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806506-806600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:813285-813366:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:814449-815909:1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031439994.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(704974..705173,748230..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..815909)
location: region:704974-815909:1
so has part: feature:704974-705173:1:exon
so has part: feature:748230-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-815909:1:exon

position:704974:1
position: 704974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:704974-705173:1:exon

position:705173:1
position: 705173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:748230-749118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779655-779871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793569-793670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805446-805624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:806506-806600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:813285-813366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:814449-815909:1:exon

CSGALNACT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CSGALNACT1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031439995.1
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(717176..717197,748230..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..815909)
location: region:717176-815909:1
so has part: feature:717176-717197:1:exon
so has part: feature:748230-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-815909:1:exon

position:717176:1
position: 717176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717176-717197:1:exon

position:717197:1
position: 717197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:748230-749118:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:779655-779871:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:793569-793670:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:805446-805624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:806506-806600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:813285-813366:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:814449-815909:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQRDYIGSLKRQIAQLQEELQERGEQLRGAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(748527..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..814738)
location: region:748527-814738:1
so has part: feature:748527-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-814738:1:exon

XP_031295852.1
type: Protein
SIO_000068: ncbiprotein

position:748527:1
position: 748527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814738:1
position: 814738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:748527-749118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779655-779871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793569-793670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805446-805624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806506-806600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:813285-813366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:814449-814738:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQRDYIGSLKRQIAQLQEELQERGEQLRGAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(748527..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..814738)
location: region:748527-814738:1
so has part: feature:748527-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-814738:1:exon

XP_031295853.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748527-749118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779655-779871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793569-793670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805446-805624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806506-806600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:813285-813366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:814449-814738:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQRDYIGSLKRQIAQLQEELQERGEQLRGAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(748527..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..814738)
location: region:748527-814738:1
so has part: feature:748527-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-814738:1:exon

XP_031295854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748527-749118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779655-779871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793569-793670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805446-805624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806506-806600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:813285-813366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:814449-814738:1:exon

CSGALNACT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CSGALNACT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: chondroitin sulfate N-acetylgalactosaminyltransferase 1
translation: MARRGLLAWVSRVVVLLVLLCCAVSVLYMLACTPKGDDEQRGLPRAGGPTGKEAALQGWEEQQQRDYIGSLKRQIAQLQEELQERGEQLRGAQRLAGAPGRAQADLLAFLRSQVDRAEVHAGLKQATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELAEAIESAVGALNSPSEGSPYQRPYTAADFIEGIYRTEKDKGTLYELTFRGDHKHEFRRLVLFRPFGPIMQVKTEELNMASTLVNVIVPLARRVDKFRQFMHNFREMCIQQDGRIHLTVVYFGKEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNAQPGKKVFYPVLFSQYNPEIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGGFDLDIRGWGGEDVHLYRKYLHSSLLVVRAPVRGLFHLWHEKRCVHELTPEQYRMCMQSKAMNEASHGQLGMLVFRQEIEAHLRKQKQRTSSKKT
SIO_010081: CSGALNACT1
subclass of: SO_0000673
so part of: CSGALNACT1
location: join(748527..749118,779655..779871,793569..793670,805446..805624,806506..806600,813285..813366,814449..814738)
location: region:748527-814738:1
so has part: feature:748527-749118:1:exon
so has part: feature:779655-779871:1:exon
so has part: feature:793569-793670:1:exon
so has part: feature:805446-805624:1:exon
so has part: feature:806506-806600:1:exon
so has part: feature:813285-813366:1:exon
so has part: feature:814449-814738:1:exon

XP_031295855.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:748527-749118:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:779655-779871:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:793569-793670:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:805446-805624:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:806506-806600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:813285-813366:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:814449-814738:1:exon

SH2D4A
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(824303..874336)
location: region:824303-874336:-1
so has part: feature:824303-874336:-1:exon
subclass of: SO_0000010

105086443
type: Gene
SIO_000068: ncbigene

position:824303:-1
position: 824303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:874336:-1
position: 874336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:824303-874336:-1:exon

SH2D4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SH2D4A
product: SH2 domain containing 4A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_031439997.1
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(824303..825498,825960..826180,833642..833772,836181..836382,836946..837057,839812..839892,859416..859587,860691..860850,868906..869283,873625..874336))
location: region:824303-874336:-1
so has part: feature:873625-874336:-1:exon
so has part: feature:868906-869283:-1:exon
so has part: feature:860691-860850:-1:exon
so has part: feature:859416-859587:-1:exon
so has part: feature:839812-839892:-1:exon
so has part: feature:836946-837057:-1:exon
so has part: feature:836181-836382:-1:exon
so has part: feature:833642-833772:-1:exon
so has part: feature:825960-826180:-1:exon
so has part: feature:824303-825498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:873625-874336:-1:exon

position:873625:-1
position: 873625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868906-869283:-1:exon

position:868906:-1
position: 868906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869283:-1
position: 869283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:860691-860850:-1:exon

position:860691:-1
position: 860691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:860850:-1
position: 860850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859416-859587:-1:exon

position:859416:-1
position: 859416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859587:-1
position: 859587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:839812-839892:-1:exon

position:839812:-1
position: 839812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:839892:-1
position: 839892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:836946-837057:-1:exon

position:836946:-1
position: 836946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:837057:-1
position: 837057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:836181-836382:-1:exon

position:836181:-1
position: 836181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:836382:-1
position: 836382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:833642-833772:-1:exon

position:833642:-1
position: 833642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:833772:-1
position: 833772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:825960-826180:-1:exon

position:825960:-1
position: 825960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826180:-1
position: 826180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:824303-825498:-1:exon

position:825498:-1
position: 825498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SH2D4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SH2D4A
product: SH2 domain containing 4A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031439996.1
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(824303..825498,825960..826180,833642..833772,836181..836382,836946..837057,839812..839892,859416..859587,860691..860850,868906..869283,873480..874336))
location: region:824303-874336:-1
so has part: feature:873480-874336:-1:exon
so has part: feature:868906-869283:-1:exon
so has part: feature:860691-860850:-1:exon
so has part: feature:859416-859587:-1:exon
so has part: feature:839812-839892:-1:exon
so has part: feature:836946-837057:-1:exon
so has part: feature:836181-836382:-1:exon
so has part: feature:833642-833772:-1:exon
so has part: feature:825960-826180:-1:exon
so has part: feature:824303-825498:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:873480-874336:-1:exon

position:873480:-1
position: 873480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:868906-869283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:860691-860850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859416-859587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:839812-839892:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836946-837057:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:836181-836382:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:833642-833772:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825960-826180:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824303-825498:-1:exon

SH2D4A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SH2D4A
product: SH2 domain containing 4A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_031439998.1
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(824303..825498,825960..826180,833642..833772,836181..836382,836946..837057,859416..859587,860691..860850,868906..869283,873480..874335))
location: region:824303-874335:-1
so has part: feature:873480-874335:-1:exon
so has part: feature:868906-869283:-1:exon
so has part: feature:860691-860850:-1:exon
so has part: feature:859416-859587:-1:exon
so has part: feature:836946-837057:-1:exon
so has part: feature:836181-836382:-1:exon
so has part: feature:833642-833772:-1:exon
so has part: feature:825960-826180:-1:exon
so has part: feature:824303-825498:-1:exon

position:874335:-1
position: 874335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873480-874335:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:868906-869283:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:860691-860850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859416-859587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836946-837057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836181-836382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833642-833772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825960-826180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:824303-825498:-1:exon

SH2D4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 4A isoform X2
translation: MLKQILAEMYIDPDLLAELSEEQKQILFFKMREEQIRRWKEREAAMENKECLPVKSRPKKENGKSVHWKLGADKEVWVWVMGEHHLDKPYDVLCDEILAERARLKAEQEAEELRKTQSGGFTSSLKAKSHSSDLPVSGDRETQNVCTKAAEEGGPGPGGGPTPPVKEEKTPKKESVKKTQGEEIKQIDEEKTKQIYKNWKEDSEWQASLRKSKAADERRRSLARQAREDYQRLSQRGRKSGGPQNSRSGPPQPRRPPLPPKPQFLSSTGHPDKPLRHQGVTRTASSSLQEDIVHWFREEQVPLRAGYLGASDSIAPWFHGILTVKRANELLSACVPGSFLVRVSDRTRGYALSYLSDSGCKHFLIDASAGSYSFLGVDQLRHASLADLVEYHKDEPITSLGKELLLHPCGQQEGPPDYLELFE
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(825406..825498,825960..826180,833642..833772,836181..836382,836946..837057,859416..859587,860691..860850,868906..869086))
location: region:825406-869086:-1
so has part: feature:868906-869086:-1:exon
so has part: feature:860691-860850:-1:exon
so has part: feature:859416-859587:-1:exon
so has part: feature:836946-837057:-1:exon
so has part: feature:836181-836382:-1:exon
so has part: feature:833642-833772:-1:exon
so has part: feature:825960-826180:-1:exon
so has part: feature:825406-825498:-1:exon

XP_031295858.1
type: Protein
SIO_000068: ncbiprotein

position:825406:-1
position: 825406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:869086:-1
position: 869086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:868906-869086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860691-860850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859416-859587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:836946-837057:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836181-836382:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:833642-833772:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:825960-826180:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825406-825498:-1:exon

SH2D4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 4A isoform X1
translation: MLKQILAEMYIDPDLLAELSEEQKQILFFKMREEQIRRWKEREAAMENKECLPVKSRPKKENGKSVHWKLGADKEVWVWVMGEHHLDKPYDVLCDEILAERARLKAEQEAEELRKTQSGGFTSSLKAKSHSSDLPVSGDRETQNVCTKAAEEGGPGPGGGPTPPVKEEKTPSPSGSFRNIQQMLADSINRMKGYRFRQKKESVKKTQGEEIKQIDEEKTKQIYKNWKEDSEWQASLRKSKAADERRRSLARQAREDYQRLSQRGRKSGGPQNSRSGPPQPRRPPLPPKPQFLSSTGHPDKPLRHQGVTRTASSSLQEDIVHWFREEQVPLRAGYLGASDSIAPWFHGILTVKRANELLSACVPGSFLVRVSDRTRGYALSYLSDSGCKHFLIDASAGSYSFLGVDQLRHASLADLVEYHKDEPITSLGKELLLHPCGQQEGPPDYLELFE
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(825406..825498,825960..826180,833642..833772,836181..836382,836946..837057,839812..839892,859416..859587,860691..860850,868906..869086))
location: region:825406-869086:-1
so has part: feature:868906-869086:-1:exon
so has part: feature:860691-860850:-1:exon
so has part: feature:859416-859587:-1:exon
so has part: feature:839812-839892:-1:exon
so has part: feature:836946-837057:-1:exon
so has part: feature:836181-836382:-1:exon
so has part: feature:833642-833772:-1:exon
so has part: feature:825960-826180:-1:exon
so has part: feature:825406-825498:-1:exon

XP_031295856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:868906-869086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860691-860850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859416-859587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839812-839892:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836946-837057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836181-836382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833642-833772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825960-826180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825406-825498:-1:exon

SH2D4A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SH2D4A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SH2 domain-containing protein 4A isoform X1
translation: MLKQILAEMYIDPDLLAELSEEQKQILFFKMREEQIRRWKEREAAMENKECLPVKSRPKKENGKSVHWKLGADKEVWVWVMGEHHLDKPYDVLCDEILAERARLKAEQEAEELRKTQSGGFTSSLKAKSHSSDLPVSGDRETQNVCTKAAEEGGPGPGGGPTPPVKEEKTPSPSGSFRNIQQMLADSINRMKGYRFRQKKESVKKTQGEEIKQIDEEKTKQIYKNWKEDSEWQASLRKSKAADERRRSLARQAREDYQRLSQRGRKSGGPQNSRSGPPQPRRPPLPPKPQFLSSTGHPDKPLRHQGVTRTASSSLQEDIVHWFREEQVPLRAGYLGASDSIAPWFHGILTVKRANELLSACVPGSFLVRVSDRTRGYALSYLSDSGCKHFLIDASAGSYSFLGVDQLRHASLADLVEYHKDEPITSLGKELLLHPCGQQEGPPDYLELFE
SIO_010081: SH2D4A
subclass of: SO_0000673
so part of: SH2D4A
location: complement(join(825406..825498,825960..826180,833642..833772,836181..836382,836946..837057,839812..839892,859416..859587,860691..860850,868906..869086))
location: region:825406-869086:-1
so has part: feature:868906-869086:-1:exon
so has part: feature:860691-860850:-1:exon
so has part: feature:859416-859587:-1:exon
so has part: feature:839812-839892:-1:exon
so has part: feature:836946-837057:-1:exon
so has part: feature:836181-836382:-1:exon
so has part: feature:833642-833772:-1:exon
so has part: feature:825960-826180:-1:exon
so has part: feature:825406-825498:-1:exon

XP_031295857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:868906-869086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:860691-860850:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:859416-859587:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:839812-839892:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:836946-837057:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:836181-836382:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:833642-833772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:825960-826180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:825406-825498:-1:exon

LOC116149089
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(875676..878273)
location: region:875676-878273:-1
so has part: feature:875676-878273:-1:exon
subclass of: SO_0000011

116149089
type: Gene
SIO_000068: ncbigene

position:875676:-1
position: 875676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:878273:-1
position: 878273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875676-878273:-1:exon

LOC116149089
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149089
product: uncharacterized LOC116149089
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004132699.1
SIO_010081: LOC116149089
subclass of: SO_0000673
so part of: LOC116149089
location: complement(join(875676..876309,877816..878273))
location: region:875676-878273:-1
so has part: feature:877816-878273:-1:exon
so has part: feature:875676-876309:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:877816-878273:-1:exon

position:877816:-1
position: 877816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875676-876309:-1:exon

position:876309:-1
position: 876309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116149090
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 902001..903991
location: region:902001-903991:1
so has part: feature:902001-903991:1:exon
subclass of: SO_0000011

116149090
type: Gene
SIO_000068: ncbigene

position:902001:1
position: 902001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:903991:1
position: 903991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:902001-903991:1:exon

LOC116149090
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149090
product: uncharacterized LOC116149090
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004132700.1
SIO_010081: LOC116149090
subclass of: SO_0000673
so part of: LOC116149090
location: join(902001..903118,903315..903991)
location: region:902001-903991:1
so has part: feature:902001-903118:1:exon
so has part: feature:903315-903991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902001-903118:1:exon

position:903118:1
position: 903118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:903315-903991:1:exon

position:903315:1
position: 903315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1002985..1470744
location: region:1002985-1470744:1
so has part: feature:1002985-1470744:1:exon
subclass of: SO_0000010

105086441
type: Gene
SIO_000068: ncbigene

position:1002985:1
position: 1002985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1470744:1
position: 1470744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002985-1470744:1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031439999.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1002985..1003857,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1444809,1453719..1456341,1457828..1457924,1462973..1470744)
location: region:1002985-1470744:1
so has part: feature:1002985-1003857:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1444809:1:exon
so has part: feature:1453719-1456341:1:exon
so has part: feature:1457828-1457924:1:exon
so has part: feature:1462973-1470744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1002985-1003857:1:exon

position:1003857:1
position: 1003857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

position:1122539:1
position: 1122539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1122647:1
position: 1122647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

position:1163051:1
position: 1163051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164155:1
position: 1164155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

position:1166244:1
position: 1166244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166639:1
position: 1166639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

position:1220385:1
position: 1220385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220588:1
position: 1220588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

position:1220689:1
position: 1220689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1220769:1
position: 1220769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

position:1222486:1
position: 1222486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1222598:1
position: 1222598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

position:1225120:1
position: 1225120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1225178:1
position: 1225178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

position:1246717:1
position: 1246717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1246806:1
position: 1246806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

position:1334674:1
position: 1334674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1334717:1
position: 1334717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

position:1357407:1
position: 1357407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1357600:1
position: 1357600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

position:1380992:1
position: 1380992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381062:1
position: 1381062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

position:1412848:1
position: 1412848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413005:1
position: 1413005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

position:1415500:1
position: 1415500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415644:1
position: 1415644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

position:1426231:1
position: 1426231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426374:1
position: 1426374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1444809:1:exon

position:1444617:1
position: 1444617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1444809:1
position: 1444809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1453719-1456341:1:exon

position:1453719:1
position: 1453719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1456341:1
position: 1456341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1457828-1457924:1:exon

position:1457828:1
position: 1457828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1457924:1
position: 1457924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1462973-1470744:1:exon

position:1462973:1
position: 1462973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031440001.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1002987..1003857,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1444895,1453719..1453855)
location: region:1002987-1453855:1
so has part: feature:1002987-1003857:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1444895:1:exon
so has part: feature:1453719-1453855:1:exon

position:1002987:1
position: 1002987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453855:1
position: 1453855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002987-1003857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1444895:1:exon

position:1444895:1
position: 1444895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1453719-1453855:1:exon

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031440000.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1002987..1003857,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1452225)
location: region:1002987-1452225:1
so has part: feature:1002987-1003857:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1452225:1:exon

position:1452225:1
position: 1452225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1002987-1003857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1452225:1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X1
translation: MADESGQRQMKTSFLFVQLRAPPARALPAPSPARTAAAGGLEEGRFVPSPGKGFSAGQAPGVPRGSAAPPLQRQGRGTEAPAARSCSAPKKEEEGEERTRDLDAKRGSPCRSLGRRRALAPASRNRGRRRPLPCRPPSPAPGMGDGGGSRSAGWRARPVITAPRDLWGTDPQSRDAWGCSIPQARADDGSENAVPRGDAGPRATCPVRPRSAEGTGTPARARRARLCRYCAPLQTSRSCPAPPAALPLKAETFVWVNSASAHSQSVAKAKYEFLFGRSEEKTPDTSDHGGSTLLPPNVTNEFPEYGTMEEGGEGLRASLELDAESLACRPQGPQGFRLLAGQHSGLASGTGGPPDVGEAPSQSHLKEQSLQPIDSLISALKATEARIASGTLKAAKVLDRDVAPGFSVQQVEKEPDTASHKTQRANELFPAGREKPPDIPLSAEVMTEENFYLSIQKDLTALLTGETQAELSRTANNGRKGVLHVQEPAHPASSVGSPATHSSLGSAGLLRERRSDQGGGHPGRGDQGSSAGRPGQVKHVEFQGVEILWTGGEKRDTRQPVDFETLLERTTPPEGKEFSKAPGHPVSCAGLCNSAGLTGNVWDEAQGAPAERLAAGSGPLSPVPLLESGEDEVFLRDNKEHLEKKPGLERDKQRALEQEEPLRGGEDDVLGPGCAEDPTDVYSSQFEAVLDNTSLYYSAGSSETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTPAGGQQDILSVSADGGVVMGCSGGITNGLSGSRSSVYSRGTPEAAFWGSSHSHAGVKTALLDARSEMGSTDILEKETSGSLSNGTSGNVDAARRLARRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLIHFSNRYFYCNPDTIASQDGVHCLTCAVMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSEGTDEKANGTHPKTLSRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQIATELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYETYVRVLKEGGVELLNSSGGGPAGLKKSHSSPSLNPDSSPVTAKVKRNVSERKDHRPETPEREEGDDTEDQAQDLEKTSSGRETGQISKVRCERARFYTSVSKKPVTQGQQQPLWCLVWQTDRRASLQPSPPASLLGLSL
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1003111..1003857,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1444809,1453719..1453960)
location: region:1003111-1453960:1
so has part: feature:1003111-1003857:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1444809:1:exon
so has part: feature:1453719-1453960:1:exon

XP_031295859.1
type: Protein
SIO_000068: ncbiprotein

position:1003111:1
position: 1003111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1453960:1
position: 1453960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003111-1003857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1444809:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1453719-1453960:1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X2
translation: MADESGQRQMKTSFLFVQLRAPPARALPAPSPARTAAAGGLEEGRFVPSPGKGFSAGQAPGVPRGSAAPPLQRQGRGTEAPAARSCSAPKKEEEGEERTRDLDAKRGSPCRSLGRRRALAPASRNRGRRRPLPCRPPSPAPGMGDGGGSRSAGWRARPVITAPRDLWGTDPQSRDAWGCSIPQARADDGSENAVPRGDAGPRATCPVRPRSAEGTGTPARARRARLCRYCAPLQTSRSCPAPPAALPLKAETFVWVNSASAHSQSVAKAKYEFLFGRSEEKTPDTSDHGGSTLLPPNVTNEFPEYGTMEEGGEGLRASLELDAESLACRPQGPQGFRLLAGQHSGLASGTGGPPDVGEAPSQSHLKEQSLQPIDSLISALKATEARIASGTLKAAKVLDRDVAPGFSVQQVEKEPDTASHKTQRANELFPAGREKPPDIPLSAEVMTEENFYLSIQKDLTALLTGETQAELSRTANNGRKGVLHVQEPAHPASSVGSPATHSSLGSAGLLRERRSDQGGGHPGRGDQGSSAGRPGQVKHVEFQGVEILWTGGEKRDTRQPVDFETLLERTTPPEGKEFSKAPGHPVSCAGLCNSAGLTGNVWDEAQGAPAERLAAGSGPLSPVPLLESGEDEVFLRDNKEHLEKKPGLERDKQRALEQEEPLRGGEDDVLGPGCAEDPTDVYSSQFEAVLDNTSLYYSAGSSETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTPAGGQQDILSVSADGGVVMGCSGGITNGLSGSRSSVYSRGTPEAAFWGSSHSHAGVKTALLDARSEMGSTDILEKETSGSLSNGTSGNVDAARRLARRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLIHFSNRYFYCNPDTIASQDGVHCLTCAVMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSEGTDEKANGTHPKTLSRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQIATELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYETYVRVLKEGGVELLNSSGGGPAGLKKSHSSPSLNPDSSPVTAKVKRNVSERKDHRPETPGIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1003111..1003857,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1444832)
location: region:1003111-1444832:1
so has part: feature:1003111-1003857:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1444832:1:exon

XP_031295860.1
type: Protein
SIO_000068: ncbiprotein

position:1444832:1
position: 1444832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1003111-1003857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1444832:1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X2
translation: MADESGQRQMKTSFLFVQLRAPPARALPAPSPARTAAAGGLEEGRFVPSPGKGFSAGQAPGVPRGSAAPPLQRQGRGTEAPAARSCSAPKKEEEGEERTRDLDAKRGSPCRSLGRRRALAPASRNRGRRRPLPCRPPSPAPGMGDGGGSRSAGWRARPVITAPRDLWGTDPQSRDAWGCSIPQARADDGSENAVPRGDAGPRATCPVRPRSAEGTGTPARARRARLCRYCAPLQTSRSCPAPPAALPLKAETFVWVNSASAHSQSVAKAKYEFLFGRSEEKTPDTSDHGGSTLLPPNVTNEFPEYGTMEEGGEGLRASLELDAESLACRPQGPQGFRLLAGQHSGLASGTGGPPDVGEAPSQSHLKEQSLQPIDSLISALKATEARIASGTLKAAKVLDRDVAPGFSVQQVEKEPDTASHKTQRANELFPAGREKPPDIPLSAEVMTEENFYLSIQKDLTALLTGETQAELSRTANNGRKGVLHVQEPAHPASSVGSPATHSSLGSAGLLRERRSDQGGGHPGRGDQGSSAGRPGQVKHVEFQGVEILWTGGEKRDTRQPVDFETLLERTTPPEGKEFSKAPGHPVSCAGLCNSAGLTGNVWDEAQGAPAERLAAGSGPLSPVPLLESGEDEVFLRDNKEHLEKKPGLERDKQRALEQEEPLRGGEDDVLGPGCAEDPTDVYSSQFEAVLDNTSLYYSAGSSETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTPAGGQQDILSVSADGGVVMGCSGGITNGLSGSRSSVYSRGTPEAAFWGSSHSHAGVKTALLDARSEMGSTDILEKETSGSLSNGTSGNVDAARRLARRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLIHFSNRYFYCNPDTIASQDGVHCLTCAVMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSEGTDEKANGTHPKTLSRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQIATELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYETYVRVLKEGGVELLNSSGGGPAGLKKSHSSPSLNPDSSPVTAKVKRNVSERKDHRPETPGIKQKVT
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1003111..1003857,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1444832)
location: region:1003111-1444832:1
so has part: feature:1003111-1003857:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1444832:1:exon

XP_031295861.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1003111-1003857:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1444832:1:exon

LOC116149092
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1040554..1058407
location: region:1040554-1058407:1
so has part: feature:1040554-1058407:1:exon
subclass of: SO_0000011

116149092
type: Gene
SIO_000068: ncbigene

position:1040554:1
position: 1040554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058407:1
position: 1058407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1040554-1058407:1:exon

LOC116149092
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149092
product: uncharacterized LOC116149092
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132701.1
SIO_010081: LOC116149092
subclass of: SO_0000673
so part of: LOC116149092
location: join(1040554..1040563,1054378..1054382,1057886..1058407)
location: region:1040554-1058407:1
so has part: feature:1040554-1040563:1:exon
so has part: feature:1054378-1054382:1:exon
so has part: feature:1057886-1058407:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1040554-1040563:1:exon

position:1040563:1
position: 1040563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1054378-1054382:1:exon

position:1054378:1
position: 1054378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1054382:1
position: 1054382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1057886-1058407:1:exon

position:1057886:1
position: 1057886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PSD3
product: pleckstrin and Sec7 domain containing 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031440003.1
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1067440..1067625,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1444809,1453719..1456341,1457828..1460872)
location: region:1067440-1460872:1
so has part: feature:1067440-1067625:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1444809:1:exon
so has part: feature:1453719-1456341:1:exon
so has part: feature:1457828-1460872:1:exon

position:1067440:1
position: 1067440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1460872:1
position: 1460872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067440-1067625:1:exon

position:1067625:1
position: 1067625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1444809:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1453719-1456341:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1457828-1460872:1:exon

PSD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PSD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PH and SEC7 domain-containing protein 3 isoform X3
translation: MERSDATAETFVWVNSASAHSQSVAKAKYEFLFGRSEEKTPDTSDHGGSTLLPPNVTNEFPEYGTMEEGGEGLRASLELDAESLACRPQGPQGFRLLAGQHSGLASGTGGPPDVGEAPSQSHLKEQSLQPIDSLISALKATEARIASGTLKAAKVLDRDVAPGFSVQQVEKEPDTASHKTQRANELFPAGREKPPDIPLSAEVMTEENFYLSIQKDLTALLTGETQAELSRTANNGRKGVLHVQEPAHPASSVGSPATHSSLGSAGLLRERRSDQGGGHPGRGDQGSSAGRPGQVKHVEFQGVEILWTGGEKRDTRQPVDFETLLERTTPPEGKEFSKAPGHPVSCAGLCNSAGLTGNVWDEAQGAPAERLAAGSGPLSPVPLLESGEDEVFLRDNKEHLEKKPGLERDKQRALEQEEPLRGGEDDVLGPGCAEDPTDVYSSQFEAVLDNTSLYYSAGSSETLYSEPDSYFSFEMPLTPMIQQRIKEGGQFLERTPAGGQQDILSVSADGGVVMGCSGGITNGLSGSRSSVYSRGTPEAAFWGSSHSHAGVKTALLDARSEMGSTDILEKETSGSLSNGTSGNVDAARRLARRLYQLDRFKRSDVAKHLGKNNEFSKLVAEEYLKFFDFTGMTLDQSLRYFFKAFSLVGETQERERVLIHFSNRYFYCNPDTIASQDGVHCLTCAVMLLNTDLHGHNIGKKMTCQEFIANLQGVDEGGDFSKDLLKALYNSIKNEKLEWAVDDEEKKKSPSEGTDEKANGTHPKTLSRIGSTTNPFLDIPHDPNAAVYKSGFLARKIHADMDGKKTPRGKRGWKTFYAVLKGTVLYLQKDEYKPEKALSEEDLKNAVSVHHALASQATDYEKKPNVLKLKTADWRVLLFQAQSPEEMQGWINKINCVAAVFSAPPFPAAIGSQKKFSRPLLPATTTKLSQEEQLKSHESKLKQIATELAEHRSYPPDKKVKAKEVDEYKLKDHYLEFEKTRYETYVRVLKEGGVELLNSSGGGPAGLKKSHSSPSLNPDSSPVTAKVKRNVSERKDHRPETPEREEGDDTEDQAQDLEKTSSGRETGQISKVRCERARFYTSVSKKPVTQGQQQPLWCLVWQTDRRASLQPSPPASLLGLSL
SIO_010081: PSD3
subclass of: SO_0000673
so part of: PSD3
location: join(1067605..1067625,1122539..1122647,1163051..1164155,1166244..1166639,1220385..1220588,1220689..1220769,1222486..1222598,1225120..1225178,1246717..1246806,1334674..1334717,1357407..1357600,1380992..1381062,1412848..1413005,1415500..1415644,1426231..1426374,1444617..1444809,1453719..1453960)
location: region:1067605-1453960:1
so has part: feature:1067605-1067625:1:exon
so has part: feature:1122539-1122647:1:exon
so has part: feature:1163051-1164155:1:exon
so has part: feature:1166244-1166639:1:exon
so has part: feature:1220385-1220588:1:exon
so has part: feature:1220689-1220769:1:exon
so has part: feature:1222486-1222598:1:exon
so has part: feature:1225120-1225178:1:exon
so has part: feature:1246717-1246806:1:exon
so has part: feature:1334674-1334717:1:exon
so has part: feature:1357407-1357600:1:exon
so has part: feature:1380992-1381062:1:exon
so has part: feature:1412848-1413005:1:exon
so has part: feature:1415500-1415644:1:exon
so has part: feature:1426231-1426374:1:exon
so has part: feature:1444617-1444809:1:exon
so has part: feature:1453719-1453960:1:exon

XP_031295863.1
type: Protein
SIO_000068: ncbiprotein

position:1067605:1
position: 1067605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1067605-1067625:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1122539-1122647:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1163051-1164155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1166244-1166639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220385-1220588:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220689-1220769:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1222486-1222598:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1225120-1225178:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1246717-1246806:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1334674-1334717:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1357407-1357600:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1380992-1381062:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412848-1413005:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1415500-1415644:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1426231-1426374:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1444617-1444809:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1453719-1453960:1:exon

LOC116149268
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149268
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1226366..1226496)
location: region:1226366-1226496:-1
so has part: feature:1226366-1226496:-1:exon
subclass of: SO_0000578

116149268
type: Gene
SIO_000068: ncbigene

position:1226366:-1
position: 1226366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226496:-1
position: 1226496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1226366-1226496:-1:exon

LOC116149268
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116149268
product: small nucleolar RNA SNORA17
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00560
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132884.1
SIO_010081: LOC116149268
subclass of: SO_0000673
so part of: LOC116149268
location: complement(1226366..1226496)
location: region:1226366-1226496:-1
so has part: feature:1226366-1226496:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1226366-1226496:-1:exon

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1500770..1500841)
location: region:1500770-1500841:-1
so has part: feature:1500770-1500841:-1:exon
subclass of: SO_0000663

116149281
type: Gene
SIO_000068: ncbigene

position:1500770:-1
position: 1500770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500841:-1
position: 1500841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500770-1500841:-1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1500807..1500809),aa:Ala, seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: complement(1500770..1500841)
location: region:1500770-1500841:-1
so has part: feature:1500770-1500841:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500770-1500841:-1:exon

LOC116149243
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1505992..1506991)
location: region:1505992-1506991:-1
so has part: feature:1505992-1506991:-1:exon

116149243
type: Gene
SIO_000068: ncbigene

position:1505992:-1
position: 1505992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506991:-1
position: 1506991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505992-1506991:-1:exon

LOC116149243
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149243
subclass of: SO_0000673
so part of: LOC116149243
location: complement(1505992..1506682)
location: region:1505992-1506682:-1
so has part: feature:1505992-1506682:-1:exon

position:1506682:-1
position: 1506682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1505992-1506682:-1:exon

LOC116149243
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149243
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149243
subclass of: SO_0000673
so part of: LOC116149243
location: complement(1506984..1506991)
location: region:1506984-1506991:-1
so has part: feature:1506984-1506991:-1:exon

position:1506984:-1
position: 1506984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1506984-1506991:-1:exon

LOC105086440
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1557982..1567464)
location: region:1557982-1567464:-1
so has part: feature:1557982-1567464:-1:exon
subclass of: SO_0000010

105086440
type: Gene
SIO_000068: ncbigene

position:1557982:-1
position: 1557982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567464:-1
position: 1567464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557982-1567464:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031440020.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566302,1567369..1567464))
location: region:1557982-1567464:-1
so has part: feature:1567369-1567464:-1:exon
so has part: feature:1566164-1566302:-1:exon
so has part: feature:1557982-1559689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567464:-1:exon

position:1567369:-1
position: 1567369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566302:-1:exon

position:1566164:-1
position: 1566164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566302:-1
position: 1566302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

position:1559689:-1
position: 1559689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031440014.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566377,1567369..1567464))
location: region:1557982-1567464:-1
so has part: feature:1567369-1567464:-1:exon
so has part: feature:1566164-1566377:-1:exon
so has part: feature:1557982-1559689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567464:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566377:-1:exon

position:1566377:-1
position: 1566377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031440023.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566534..1566659,1567369..1567458))
location: region:1557982-1567458:-1
so has part: feature:1567369-1567458:-1:exon
so has part: feature:1566534-1566659:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567458:-1
position: 1567458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567458:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566659:-1:exon

position:1566534:-1
position: 1566534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566659:-1
position: 1566659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031440004.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566534..1566707,1567369..1567448))
location: region:1557982-1567448:-1
so has part: feature:1567369-1567448:-1:exon
so has part: feature:1566534-1566707:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567448:-1
position: 1567448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567448:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566707:-1:exon

position:1566707:-1
position: 1566707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031440006.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566534..1566703,1567369..1567446))
location: region:1557982-1567446:-1
so has part: feature:1567369-1567446:-1:exon
so has part: feature:1566534-1566703:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567446:-1
position: 1567446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566703:-1:exon

position:1566703:-1
position: 1566703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031440022.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1567369..1567437))
location: region:1557982-1567437:-1
so has part: feature:1567369-1567437:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567437:-1
position: 1567437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567437:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_031440010.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566659,1567369..1567391))
location: region:1557982-1567391:-1
so has part: feature:1567369-1567391:-1:exon
so has part: feature:1566164-1566659:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567391:-1
position: 1567391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031440017.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566302,1566534..1566659,1567369..1567383))
location: region:1557982-1567383:-1
so has part: feature:1567369-1567383:-1:exon
so has part: feature:1566534-1566659:-1:exon
so has part: feature:1566164-1566302:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567383:-1
position: 1567383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567369-1567383:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1566164-1566302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031440015.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566302,1566534..1566659,1567235..1567362))
location: region:1557982-1567362:-1
so has part: feature:1567235-1567362:-1:exon
so has part: feature:1566534-1566659:-1:exon
so has part: feature:1566164-1566302:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567362:-1
position: 1567362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567362:-1:exon

position:1567235:-1
position: 1567235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1566164-1566302:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031440012.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566377,1566534..1566659,1567235..1567362))
location: region:1557982-1567362:-1
so has part: feature:1567235-1567362:-1:exon
so has part: feature:1566534-1566659:-1:exon
so has part: feature:1566164-1566377:-1:exon
so has part: feature:1557982-1559689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1566164-1566377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_031440009.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566659,1567235..1567362))
location: region:1557982-1567362:-1
so has part: feature:1567235-1567362:-1:exon
so has part: feature:1566164-1566659:-1:exon
so has part: feature:1557982-1559689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031440011.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1562998..1563076,1566164..1566659,1567235..1567362))
location: region:1557982-1567362:-1
so has part: feature:1567235-1567362:-1:exon
so has part: feature:1566164-1566659:-1:exon
so has part: feature:1562998-1563076:-1:exon
so has part: feature:1557982-1559689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1562998-1563076:-1:exon

position:1562998:-1
position: 1562998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1563076:-1
position: 1563076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031440019.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1565351..1565493,1566164..1566659,1567235..1567362))
location: region:1557982-1567362:-1
so has part: feature:1567235-1567362:-1:exon
so has part: feature:1566164-1566659:-1:exon
so has part: feature:1565351-1565493:-1:exon
so has part: feature:1557982-1559689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1565351-1565493:-1:exon

position:1565351:-1
position: 1565351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565493:-1
position: 1565493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031440013.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1562998..1563076,1565351..1565493,1566164..1566659,1567235..1567362))
location: region:1557982-1567362:-1
so has part: feature:1567235-1567362:-1:exon
so has part: feature:1566164-1566659:-1:exon
so has part: feature:1565351-1565493:-1:exon
so has part: feature:1562998-1563076:-1:exon
so has part: feature:1557982-1559689:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1565351-1565493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1562998-1563076:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031440007.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566534..1566707,1567235..1567355))
location: region:1557982-1567355:-1
so has part: feature:1567235-1567355:-1:exon
so has part: feature:1566534-1566707:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567355:-1
position: 1567355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566707:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031440016.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566377,1567235..1567333))
location: region:1557982-1567333:-1
so has part: feature:1567235-1567333:-1:exon
so has part: feature:1566164-1566377:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567333:-1
position: 1567333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567333:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566377:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031440008.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566534..1566703,1567235..1567319))
location: region:1557982-1567319:-1
so has part: feature:1567235-1567319:-1:exon
so has part: feature:1566534-1566703:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567319:-1
position: 1567319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566534-1566703:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 33 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031440005.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566534..1567222))
location: region:1557982-1567222:-1
so has part: feature:1566534-1567222:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1567222:-1
position: 1567222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1566534-1567222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_031440018.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1566164..1566302,1566534..1566673))
location: region:1557982-1566673:-1
so has part: feature:1566534-1566673:-1:exon
so has part: feature:1566164-1566302:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1566673:-1
position: 1566673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1566534-1566673:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566302:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031440021.1
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1557982..1559689,1562998..1563076,1565351..1565499))
location: region:1557982-1565499:-1
so has part: feature:1565351-1565499:-1:exon
so has part: feature:1562998-1563076:-1:exon
so has part: feature:1557982-1559689:-1:exon

position:1565499:-1
position: 1565499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1565351-1565499:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1562998-1563076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1557982-1559689:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X1
translation: MCRIPEERGDRGGRQPQERGALWALQSELRPPALVRPRNSNQPAGSSLGIMNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1558811..1559689,1566534..1566677))
location: region:1558811-1566677:-1
so has part: feature:1566534-1566677:-1:exon
so has part: feature:1558811-1559689:-1:exon

XP_031295864.1
type: Protein
SIO_000068: ncbiprotein

position:1558811:-1
position: 1558811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566677:-1
position: 1566677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1566534-1566677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558811-1559689:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X1
translation: MCRIPEERGDRGGRQPQERGALWALQSELRPPALVRPRNSNQPAGSSLGIMNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1558811..1559689,1566534..1566677))
location: region:1558811-1566677:-1
so has part: feature:1566534-1566677:-1:exon
so has part: feature:1558811-1559689:-1:exon

XP_031295865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1566534-1566677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558811-1559689:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X1
translation: MCRIPEERGDRGGRQPQERGALWALQSELRPPALVRPRNSNQPAGSSLGIMNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1558811..1559689,1566534..1566677))
location: region:1558811-1566677:-1
so has part: feature:1566534-1566677:-1:exon
so has part: feature:1558811-1559689:-1:exon

XP_031295866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1566534-1566677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558811-1559689:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X1
translation: MCRIPEERGDRGGRQPQERGALWALQSELRPPALVRPRNSNQPAGSSLGIMNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1558811..1559689,1566534..1566677))
location: region:1558811-1566677:-1
so has part: feature:1566534-1566677:-1:exon
so has part: feature:1558811-1559689:-1:exon

XP_031295867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1566534-1566677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558811-1559689:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X1
translation: MCRIPEERGDRGGRQPQERGALWALQSELRPPALVRPRNSNQPAGSSLGIMNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(join(1558811..1559689,1566534..1566677))
location: region:1558811-1566677:-1
so has part: feature:1566534-1566677:-1:exon
so has part: feature:1558811-1559689:-1:exon

XP_031295868.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1566534-1566677:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1558811-1559689:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295869.1
type: Protein
SIO_000068: ncbiprotein

position:1559683:-1
position: 1559683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295870.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295872.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295875.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295879.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295881.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295882.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086440
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylamine N-acetyltransferase 1 isoform X2
translation: MNIEAYFERIGYKNPRNKLDLETLTDILQHQLQAVPFENLNIHCGEAMELDLEAIFDQIVRRKRGGWCLQVNHLLYWALTTVGFETTMLGGYVYNSIANKYSKAMIHLLLKVTIDGRNYIADAGFGRSYQMWQPLELISGKDQPQVPCIFRLTEEGGIWYLDQIRREQYIPNEEFLNSDLLEKNAYRKIYSFTLEPRTIEDFESVNVFLQESPASVFTSKSFCSLQTPEGVRCLVGSTLTYRIFNYKDNMDLVEFKTLNEEEIEKELESMFNISLEKKLVPKHGDRFFTI
SIO_010081: LOC105086440
subclass of: SO_0000673
so part of: LOC105086440
location: complement(1558811..1559683)
location: region:1558811-1559683:-1
so has part: feature:1558811-1559683:-1:exon

XP_031295883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1558811-1559683:-1:exon

LOC105086440
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105086440
product: arylamine N-acetyltransferase 1, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004132704.1
SIO_010081: LOC105086440
so part of: LOC105086440
location: complement(join(1564459..1564786,1566164..1566659,1567235..1567362))
location: region:1564459-1567362:-1
so has part: feature:1567235-1567362:-1:exon
so has part: feature:1566164-1566659:-1:exon
so has part: feature:1564459-1564786:-1:exon

position:1564459:-1
position: 1564459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1567235-1567362:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1566164-1566659:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1564459-1564786:-1:exon

position:1564786:-1
position: 1564786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNA6
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CHRNA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1619873..1633021
location: region:1619873-1633021:1
so has part: feature:1619873-1633021:1:exon
subclass of: SO_0000010

105086439
type: Gene
SIO_000068: ncbigene

position:1619873:1
position: 1619873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1633021:1
position: 1633021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1619873-1633021:1:exon

CHRNA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CHRNA6
product: cholinergic receptor nicotinic alpha 6 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010976942.2
SIO_010081: CHRNA6
subclass of: SO_0000673
so part of: CHRNA6
location: join(1619873..1620452,1622589..1622728,1625289..1625333,1626608..1626717,1626818..1627796,1629129..1633021)
location: region:1619873-1633021:1
so has part: feature:1619873-1620452:1:exon
so has part: feature:1622589-1622728:1:exon
so has part: feature:1625289-1625333:1:exon
so has part: feature:1626608-1626717:1:exon
so has part: feature:1626818-1627796:1:exon
so has part: feature:1629129-1633021:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1619873-1620452:1:exon

position:1620452:1
position: 1620452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1622589-1622728:1:exon

position:1622589:1
position: 1622589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1622728:1
position: 1622728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1625289-1625333:1:exon

position:1625289:1
position: 1625289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1625333:1
position: 1625333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1626608-1626717:1:exon

position:1626608:1
position: 1626608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626717:1
position: 1626717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1626818-1627796:1:exon

position:1626818:1
position: 1626818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1627796:1
position: 1627796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1629129-1633021:1:exon

position:1629129:1
position: 1629129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHRNA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CHRNA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit alpha-6
translation: MRPRKGQGSLCFGLCLWWYVLIPFFEGCAGCASEERLFHELFSHYNQFIRPVENVSDPVTVHFEVAITQLADVDEVNQIMETNLWLRHIWNDYRLRWDPVEYDGIETLRVPADKIWKPDIVLYNNAVGDFQVEGKTKALLKHDGMITWTPPAIFKSSCPMDITFFPFDHQNCSLKFGSWTYDKAEIDLLIIGSKVDMNDFWENSEWEIVDASGYKHDIKYNCCEEIYTDITYSFYIRRLPMFYTINLIIPCLFISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLVGEYLLFTMVFVTLSIVVTVFVLNIHYRTPTTHAMPTWVKTVFLRLLPQILMMKRPLGKMRETRSDKNPKSLSRRPAKVKLDHRREPRLLEECSHCHHSSELAAPKRRLRHQPSRWVTESSEHSPEVEDVFNSVQFIAENMKNRNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQPLLGNTGSS
SIO_010081: CHRNA6
subclass of: SO_0000673
so part of: CHRNA6
location: join(1620374..1620452,1622589..1622728,1625289..1625333,1626608..1626717,1626818..1627796,1629129..1629260)
location: region:1620374-1629260:1
so has part: feature:1620374-1620452:1:exon
so has part: feature:1622589-1622728:1:exon
so has part: feature:1625289-1625333:1:exon
so has part: feature:1626608-1626717:1:exon
so has part: feature:1626818-1627796:1:exon
so has part: feature:1629129-1629260:1:exon

XP_010975244.2
type: Protein
SIO_000068: ncbiprotein

position:1620374:1
position: 1620374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1629260:1
position: 1629260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1620374-1620452:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1622589-1622728:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1625289-1625333:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1626608-1626717:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1626818-1627796:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1629129-1629260:1:exon

CHRNB3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1638731..1659533)
location: region:1638731-1659533:-1
so has part: feature:1638731-1659533:-1:exon
subclass of: SO_0000010

105086449
type: Gene
SIO_000068: ncbigene

position:1638731:-1
position: 1638731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659533:-1
position: 1659533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1638731-1659533:-1:exon

CHRNB3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CHRNB3
product: cholinergic receptor nicotinic beta 3 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_010976951.2
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1638731..1639753,1641684..1642563,1642805..1642914,1652681..1652725,1653757..1653908,1659056..1659533))
location: region:1638731-1659533:-1
so has part: feature:1659056-1659533:-1:exon
so has part: feature:1653757-1653908:-1:exon
so has part: feature:1652681-1652725:-1:exon
so has part: feature:1642805-1642914:-1:exon
so has part: feature:1641684-1642563:-1:exon
so has part: feature:1638731-1639753:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1659056-1659533:-1:exon

position:1659056:-1
position: 1659056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1653757-1653908:-1:exon

position:1653757:-1
position: 1653757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1653908:-1
position: 1653908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1652681-1652725:-1:exon

position:1652681:-1
position: 1652681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1652725:-1
position: 1652725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1642805-1642914:-1:exon

position:1642805:-1
position: 1642805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642914:-1
position: 1642914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1641684-1642563:-1:exon

position:1641684:-1
position: 1641684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1642563:-1
position: 1642563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1638731-1639753:-1:exon

position:1639753:-1
position: 1639753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHRNB3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CHRNB3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal acetylcholine receptor subunit beta-3
translation: MKLTDFILVLSALGVTPSAAAGFRSLVEEEDALLRHLFQGYQKWVRPVLHANDTIKVYFGLKISQLVDVDEKNQLMTTNVWLKQEWTDHKLRWDPDEYGGIRSIKVPSESLWLPDIVLFENADGRFEGSLMTKAIVRSNGTVVWTPPASYKSSCTMDVTFFPFDRQNCSMKFGSWTYDGTLVELVLVDENVDRKDFFDNGEWEILTAKGTEGSRRDGAGWYPFVAYSFVLRRLPLFYTLFLIVPCLGLSFLTVLVFYLPSDEGEKLSLSTSVLVSLTVFLLVIEEIIPSSSKVIPLIGEYLLFIMIFVTLSIIVTVFVINVHHRSSSTYHPMAPWVKRLFLQKLPTLLCMKDHVDRYSFPDKDEGKPVSGKVRDKTKQKQVSDGEKVLVAFLEKAADSIRYISSHVKKEHFISQVVQDWKFAAQVLDRIFLWLFLIVSVTGSVLIFTPALKMWLQSHY
SIO_010081: CHRNB3
subclass of: SO_0000673
so part of: CHRNB3
location: complement(join(1639619..1639753,1641684..1642563,1642805..1642914,1652681..1652725,1653757..1653908,1659056..1659110))
location: region:1639619-1659110:-1
so has part: feature:1659056-1659110:-1:exon
so has part: feature:1653757-1653908:-1:exon
so has part: feature:1652681-1652725:-1:exon
so has part: feature:1642805-1642914:-1:exon
so has part: feature:1641684-1642563:-1:exon
so has part: feature:1639619-1639753:-1:exon

XP_010975253.2
type: Protein
SIO_000068: ncbiprotein

position:1639619:-1
position: 1639619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659110:-1
position: 1659110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1659056-1659110:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1653757-1653908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1652681-1652725:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1642805-1642914:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1641684-1642563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1639619-1639753:-1:exon

LOC116149271
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149271
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1683466..1683579)
location: region:1683466-1683579:-1
so has part: feature:1683466-1683579:-1:exon

116149271
type: Gene
SIO_000068: ncbigene

position:1683466:-1
position: 1683466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1683579:-1
position: 1683579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1683466-1683579:-1:exon

LOC116149271
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149271
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC116149271
subclass of: SO_0000673
so part of: LOC116149271
location: complement(1683466..1683579)
location: region:1683466-1683579:-1
so has part: feature:1683466-1683579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1683466-1683579:-1:exon

SMIM19
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1731646..1740014)
location: region:1731646-1740014:-1
so has part: feature:1731646-1740014:-1:exon
subclass of: SO_0000010

105086437
type: Gene
SIO_000068: ncbigene

position:1731646:-1
position: 1731646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1740014:-1
position: 1740014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1731646-1740014:-1:exon

SMIM19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SMIM19
product: small integral membrane protein 19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_031440025.1
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(1731646..1732174,1734048..1734172,1735705..1735842,1739808..1740014))
location: region:1731646-1740014:-1
so has part: feature:1739808-1740014:-1:exon
so has part: feature:1735705-1735842:-1:exon
so has part: feature:1734048-1734172:-1:exon
so has part: feature:1731646-1732174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1739808-1740014:-1:exon

position:1739808:-1
position: 1739808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1735705-1735842:-1:exon

position:1735705:-1
position: 1735705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735842:-1
position: 1735842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1734048-1734172:-1:exon

position:1734048:-1
position: 1734048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1734172:-1
position: 1734172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1731646-1732174:-1:exon

position:1732174:-1
position: 1732174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMIM19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SMIM19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small integral membrane protein 19
translation: MPGGYGVMGADGSMDYSVHEAWNEATNVYLVVILVSFGLFMYAKRNKRKIMRIFSVPPTAEALSEPNFYDTISKIRLRQQLEMYSISRKYDYQQPQNQADSVQLSLE
SIO_010081: SMIM19
subclass of: SO_0000673
so part of: SMIM19
location: complement(join(1732110..1732174,1734048..1734172,1735705..1735838))
location: region:1732110-1735838:-1
so has part: feature:1735705-1735838:-1:exon
so has part: feature:1734048-1734172:-1:exon
so has part: feature:1732110-1732174:-1:exon

XP_031295885.1
type: Protein
SIO_000068: ncbiprotein

position:1732110:-1
position: 1732110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1735838:-1
position: 1735838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1735705-1735838:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1734048-1734172:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1732110-1732174:-1:exon

SLC20A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SLC20A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1740088..1833066
location: region:1740088-1833066:1
so has part: feature:1740088-1833066:1:exon
subclass of: SO_0000010

105086436
type: Gene
SIO_000068: ncbigene

position:1740088:1
position: 1740088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1833066:1
position: 1833066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1740088-1833066:1:exon

SLC20A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC20A2
product: solute carrier family 20 member 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031440024.1
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1740088..1744460,1745637..1745736,1794598..1795151,1800171..1800311,1801639..1801724,1804678..1804774,1812673..1812789,1816869..1817069,1818008..1818578,1821599..1821784,1822749..1822833,1831574..1833066)
location: region:1740088-1833066:1
so has part: feature:1740088-1744460:1:exon
so has part: feature:1745637-1745736:1:exon
so has part: feature:1794598-1795151:1:exon
so has part: feature:1800171-1800311:1:exon
so has part: feature:1801639-1801724:1:exon
so has part: feature:1804678-1804774:1:exon
so has part: feature:1812673-1812789:1:exon
so has part: feature:1816869-1817069:1:exon
so has part: feature:1818008-1818578:1:exon
so has part: feature:1821599-1821784:1:exon
so has part: feature:1822749-1822833:1:exon
so has part: feature:1831574-1833066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1740088-1744460:1:exon

position:1744460:1
position: 1744460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1745637-1745736:1:exon

position:1745637:1
position: 1745637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1745736:1
position: 1745736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1794598-1795151:1:exon

position:1794598:1
position: 1794598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1795151:1
position: 1795151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1800171-1800311:1:exon

position:1800171:1
position: 1800171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1800311:1
position: 1800311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1801639-1801724:1:exon

position:1801639:1
position: 1801639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1801724:1
position: 1801724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1804678-1804774:1:exon

position:1804678:1
position: 1804678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1804774:1
position: 1804774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1812673-1812789:1:exon

position:1812673:1
position: 1812673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1812789:1
position: 1812789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1816869-1817069:1:exon

position:1816869:1
position: 1816869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1817069:1
position: 1817069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1818008-1818578:1:exon

position:1818008:1
position: 1818008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1818578:1
position: 1818578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1821599-1821784:1:exon

position:1821599:1
position: 1821599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1821784:1
position: 1821784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1822749-1822833:1:exon

position:1822749:1
position: 1822749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1822833:1
position: 1822833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1831574-1833066:1:exon

position:1831574:1
position: 1831574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1763978..1764049)
location: region:1763978-1764049:-1
so has part: feature:1763978-1764049:-1:exon
subclass of: SO_0000663

116149282
type: Gene
SIO_000068: ncbigene

position:1763978:-1
position: 1763978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1764049:-1
position: 1764049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1763978-1764049:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1764015..1764017),aa:Val, seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(1763978..1764049)
location: region:1763978-1764049:-1
so has part: feature:1763978-1764049:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1763978-1764049:-1:exon

LOC105086435
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086435
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1771915..1778957)
location: region:1771915-1778957:-1
so has part: feature:1771915-1778957:-1:exon
subclass of: SO_0000011

105086435
type: Gene
SIO_000068: ncbigene

position:1771915:-1
position: 1771915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1778957:-1
position: 1778957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1771915-1778957:-1:exon

LOC105086435
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105086435
product: uncharacterized LOC105086435
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004132706.1
SIO_010081: LOC105086435
subclass of: SO_0000673
so part of: LOC105086435
location: complement(join(1771915..1772305,1775324..1775400,1778826..1778957))
location: region:1771915-1778957:-1
so has part: feature:1778826-1778957:-1:exon
so has part: feature:1775324-1775400:-1:exon
so has part: feature:1771915-1772305:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1778826-1778957:-1:exon

position:1778826:-1
position: 1778826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1775324-1775400:-1:exon

position:1775324:-1
position: 1775324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1775400:-1
position: 1775400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1771915-1772305:-1:exon

position:1772305:-1
position: 1772305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC20A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC20A2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: sodium-dependent phosphate transporter 2
translation: MAMDEYLWMVILGFIIAFILAFSVGANDVANSFGTAVGSGVVTLRQACILASIFETTGSVLLGAKVGETIRKGIIDVNLYNDTVETLMAGEVSAMVGSAVWQLIASFLRLPISGTHCIVGSTIGFSLVAIGTKGVQWMELVKIVASWFISPLLSGFMSGVLFVLIRMFILKKEDPVPNGLRALPVFYAATIAINVFSIMYTGAPVLGLVLPMWAIALISFGVALLFALFVWLFVCPWMRRKIAGKLQKEGALSRVSDESLHKIQEVESPVFKELPGAKANDDSTVPLTGSAVESGTSEGTSTGHHPRATYGRALSMTHGAAKSPVSNGTFGFDGPARGDGHVYHTVHKDSGLYKDLLHRIHDERPGQDGGPRLLRRNNSYTCYTAAICGLPGLATLRADAPAAPEDSEKLVADAVAYSKKRXRYDSYSSYCNAVAEAXIEAEEGGVEMKLAAELADPDGPREDATDEEKEEKDEPEVHLLFHFLQVLTAXLRSFAHGGNDVSNAIGPLVALWLIYEQGVVLQESVTPVWLLFYGGVGICTGLWVWGRRVIQTMGKDLTPITPSSGFTIELASAFTVVIASNIGLPVSTTHCKVGSVVAVGWIRSRKAVDWRLFRNIFVAWFVTVPVAGLFSAAIMALLVYAILPFV
SIO_010081: SLC20A2
subclass of: SO_0000673
so part of: SLC20A2
location: join(1794863..1795151,1800171..1800311,1801639..1801724,1804678..1804774,1812673..1812789,1816869..1817069,1818008..1818578,1821599..1821784,1822749..1822833,1831574..1831738)
location: region:1794863-1831738:1
so has part: feature:1794863-1795151:1:exon
so has part: feature:1800171-1800311:1:exon
so has part: feature:1801639-1801724:1:exon
so has part: feature:1804678-1804774:1:exon
so has part: feature:1812673-1812789:1:exon
so has part: feature:1816869-1817069:1:exon
so has part: feature:1818008-1818578:1:exon
so has part: feature:1821599-1821784:1:exon
so has part: feature:1822749-1822833:1:exon
so has part: feature:1831574-1831738:1:exon

XP_031295884.1
type: Protein
SIO_000068: ncbiprotein

position:1794863:1
position: 1794863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831738:1
position: 1831738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1794863-1795151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800171-1800311:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1801639-1801724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1804678-1804774:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1812673-1812789:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1816869-1817069:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1818008-1818578:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1821599-1821784:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1822749-1822833:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1831574-1831738:1:exon

VDAC3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1838047..1850869)
location: region:1838047-1850869:-1
so has part: feature:1838047-1850869:-1:exon
subclass of: SO_0000010

105086434
type: Gene
SIO_000068: ncbigene

position:1838047:-1
position: 1838047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850869:-1
position: 1850869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1838047-1850869:-1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031440026.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1838047..1838546,1838967..1839024,1839910..1840060,1841349..1841576,1842611..1842663,1843661..1843813,1846407..1846409,1847547..1847596,1848407..1848475,1850683..1850869))
location: region:1838047-1850869:-1
so has part: feature:1850683-1850869:-1:exon
so has part: feature:1848407-1848475:-1:exon
so has part: feature:1847547-1847596:-1:exon
so has part: feature:1846407-1846409:-1:exon
so has part: feature:1843661-1843813:-1:exon
so has part: feature:1842611-1842663:-1:exon
so has part: feature:1841349-1841576:-1:exon
so has part: feature:1839910-1840060:-1:exon
so has part: feature:1838967-1839024:-1:exon
so has part: feature:1838047-1838546:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1850683-1850869:-1:exon

position:1850683:-1
position: 1850683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1848407-1848475:-1:exon

position:1848407:-1
position: 1848407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848475:-1
position: 1848475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1847547-1847596:-1:exon

position:1847547:-1
position: 1847547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1847596:-1
position: 1847596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1846407-1846409:-1:exon

position:1846407:-1
position: 1846407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846409:-1
position: 1846409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1843661-1843813:-1:exon

position:1843661:-1
position: 1843661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843813:-1
position: 1843813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1842611-1842663:-1:exon

position:1842611:-1
position: 1842611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1842663:-1
position: 1842663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1841349-1841576:-1:exon

position:1841349:-1
position: 1841349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1841576:-1
position: 1841576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1839910-1840060:-1:exon

position:1839910:-1
position: 1839910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1840060:-1
position: 1840060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1838967-1839024:-1:exon

position:1838967:-1
position: 1838967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839024:-1
position: 1839024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1838047-1838546:-1:exon

position:1838546:-1
position: 1838546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_031440027.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1838047..1838546,1838967..1839024,1839910..1840060,1841349..1841576,1842611..1842663,1843661..1843813,1847547..1847596,1848407..1848475,1850683..1850868))
location: region:1838047-1850868:-1
so has part: feature:1850683-1850868:-1:exon
so has part: feature:1848407-1848475:-1:exon
so has part: feature:1847547-1847596:-1:exon
so has part: feature:1843661-1843813:-1:exon
so has part: feature:1842611-1842663:-1:exon
so has part: feature:1841349-1841576:-1:exon
so has part: feature:1839910-1840060:-1:exon
so has part: feature:1838967-1839024:-1:exon
so has part: feature:1838047-1838546:-1:exon

position:1850868:-1
position: 1850868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1850683-1850868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1848407-1848475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1847547-1847596:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1843661-1843813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1842611-1842663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1841349-1841576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1839910-1840060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1838967-1839024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838047-1838546:-1:exon

VDAC3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: VDAC3
product: voltage dependent anion channel 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031440028.1
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1838047..1838546,1838967..1839024,1839910..1840060,1841349..1841576,1842611..1842663,1843661..1843813,1848407..1848475,1850683..1850818))
location: region:1838047-1850818:-1
so has part: feature:1850683-1850818:-1:exon
so has part: feature:1848407-1848475:-1:exon
so has part: feature:1843661-1843813:-1:exon
so has part: feature:1842611-1842663:-1:exon
so has part: feature:1841349-1841576:-1:exon
so has part: feature:1839910-1840060:-1:exon
so has part: feature:1838967-1839024:-1:exon
so has part: feature:1838047-1838546:-1:exon

position:1850818:-1
position: 1850818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1850683-1850818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1848407-1848475:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1843661-1843813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1842611-1842663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1841349-1841576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1839910-1840060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838967-1839024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1838047-1838546:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X2
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVEFATSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTVFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1838455..1838546,1838967..1839024,1839910..1840060,1841349..1841576,1842611..1842663,1843661..1843813,1847547..1847596,1848407..1848473))
location: region:1838455-1848473:-1
so has part: feature:1848407-1848473:-1:exon
so has part: feature:1847547-1847596:-1:exon
so has part: feature:1843661-1843813:-1:exon
so has part: feature:1842611-1842663:-1:exon
so has part: feature:1841349-1841576:-1:exon
so has part: feature:1839910-1840060:-1:exon
so has part: feature:1838967-1839024:-1:exon
so has part: feature:1838455-1838546:-1:exon

XP_031295887.1
type: Protein
SIO_000068: ncbiprotein

position:1838455:-1
position: 1838455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1848473:-1
position: 1848473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848407-1848473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1847547-1847596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1843661-1843813:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1842611-1842663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1841349-1841576:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1839910-1840060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838967-1839024:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1838455-1838546:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X1
translation: MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVMEFATSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTVFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1838455..1838546,1838967..1839024,1839910..1840060,1841349..1841576,1842611..1842663,1843661..1843813,1846407..1846409,1847547..1847596,1848407..1848473))
location: region:1838455-1848473:-1
so has part: feature:1848407-1848473:-1:exon
so has part: feature:1847547-1847596:-1:exon
so has part: feature:1846407-1846409:-1:exon
so has part: feature:1843661-1843813:-1:exon
so has part: feature:1842611-1842663:-1:exon
so has part: feature:1841349-1841576:-1:exon
so has part: feature:1839910-1840060:-1:exon
so has part: feature:1838967-1839024:-1:exon
so has part: feature:1838455-1838546:-1:exon

XP_031295886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1848407-1848473:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1847547-1847596:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1846407-1846409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1843661-1843813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1842611-1842663:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1841349-1841576:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1839910-1840060:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1838967-1839024:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1838455-1838546:-1:exon

VDAC3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: VDAC3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: voltage-dependent anion-selective channel protein 3 isoform X3
translation: MSSTKDMEFATSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISLENKLAEGLKLTLDTVFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELEA
SIO_010081: VDAC3
subclass of: SO_0000673
so part of: VDAC3
location: complement(join(1838455..1838546,1838967..1839024,1839910..1840060,1841349..1841576,1842611..1842663,1843661..1843813,1848407..1848427))
location: region:1838455-1848427:-1
so has part: feature:1848407-1848427:-1:exon
so has part: feature:1843661-1843813:-1:exon
so has part: feature:1842611-1842663:-1:exon
so has part: feature:1841349-1841576:-1:exon
so has part: feature:1839910-1840060:-1:exon
so has part: feature:1838967-1839024:-1:exon
so has part: feature:1838455-1838546:-1:exon

XP_031295888.1
type: Protein
SIO_000068: ncbiprotein

position:1848427:-1
position: 1848427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1848407-1848427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1843661-1843813:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1842611-1842663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1841349-1841576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1839910-1840060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1838967-1839024:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1838455-1838546:-1:exon

DKK4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: DKK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1860319..1864205
location: region:1860319-1864205:1
so has part: feature:1860319-1864205:1:exon
subclass of: SO_0000010

105086433
type: Gene
SIO_000068: ncbigene

position:1860319:1
position: 1860319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864205:1
position: 1864205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1860319-1864205:1:exon

DKK4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DKK4
product: dickkopf WNT signaling pathway inhibitor 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010976937.2
SIO_010081: DKK4
subclass of: SO_0000673
so part of: DKK4
location: join(1860319..1860819,1861864..1862014,1862533..1862685,1863581..1864205)
location: region:1860319-1864205:1
so has part: feature:1860319-1860819:1:exon
so has part: feature:1861864-1862014:1:exon
so has part: feature:1862533-1862685:1:exon
so has part: feature:1863581-1864205:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1860319-1860819:1:exon

position:1860819:1
position: 1860819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1861864-1862014:1:exon

position:1861864:1
position: 1861864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862014:1
position: 1862014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1862533-1862685:1:exon

position:1862533:1
position: 1862533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862685:1
position: 1862685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1863581-1864205:1:exon

position:1863581:1
position: 1863581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DKK4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DKK4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dickkopf-related protein 4
translation: MVAVVLLGLGWLCAPLGALVLDFNNIKSSADAQGARKGSQCLSDKDCSTRKFCLRPQDEKPFCATCRGLRRRCQRDAMCCPGSLCVNDVCTAMEDATLILERQTDDQDDLDTKGTTEHPSRENKPKRKPNIKNSQDSKGQEGGSCLRTSDCGPGLCCARHFWTKICKPVLLEGQVCSRRGHKEPAQAPEIFQRCDCGPGLSCRSPGAGTRQSARLRVCQKI
SIO_010081: DKK4
subclass of: SO_0000673
so part of: DKK4
location: join(1860709..1860819,1861864..1862014,1862533..1862685,1863581..1863831)
location: region:1860709-1863831:1
so has part: feature:1860709-1860819:1:exon
so has part: feature:1861864-1862014:1:exon
so has part: feature:1862533-1862685:1:exon
so has part: feature:1863581-1863831:1:exon

XP_010975239.1
type: Protein
SIO_000068: ncbiprotein

position:1860709:1
position: 1860709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1863831:1
position: 1863831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1860709-1860819:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1861864-1862014:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1862533-1862685:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1863581-1863831:1:exon

POLB
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1864985..1886612)
location: region:1864985-1886612:-1
so has part: feature:1864985-1886612:-1:exon
subclass of: SO_0000010

105086432
type: Gene
SIO_000068: ncbigene

position:1864985:-1
position: 1864985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886612:-1
position: 1886612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1864985-1886612:-1:exon

POLB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: POLB
product: DNA polymerase beta
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010976936.2
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(1864985..1865229,1866237..1866376,1866832..1866896,1872497..1872583,1873224..1873294,1874420..1874492,1874590..1874644,1876175..1876226,1878024..1878073,1879460..1879518,1880124..1880198,1883584..1883650,1886054..1886111,1886382..1886612))
location: region:1864985-1886612:-1
so has part: feature:1886382-1886612:-1:exon
so has part: feature:1886054-1886111:-1:exon
so has part: feature:1883584-1883650:-1:exon
so has part: feature:1880124-1880198:-1:exon
so has part: feature:1879460-1879518:-1:exon
so has part: feature:1878024-1878073:-1:exon
so has part: feature:1876175-1876226:-1:exon
so has part: feature:1874590-1874644:-1:exon
so has part: feature:1874420-1874492:-1:exon
so has part: feature:1873224-1873294:-1:exon
so has part: feature:1872497-1872583:-1:exon
so has part: feature:1866832-1866896:-1:exon
so has part: feature:1866237-1866376:-1:exon
so has part: feature:1864985-1865229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1886382-1886612:-1:exon

position:1886382:-1
position: 1886382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1886054-1886111:-1:exon

position:1886054:-1
position: 1886054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886111:-1
position: 1886111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1883584-1883650:-1:exon

position:1883584:-1
position: 1883584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1883650:-1
position: 1883650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1880124-1880198:-1:exon

position:1880124:-1
position: 1880124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1880198:-1
position: 1880198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1879460-1879518:-1:exon

position:1879460:-1
position: 1879460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1879518:-1
position: 1879518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1878024-1878073:-1:exon

position:1878024:-1
position: 1878024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1878073:-1
position: 1878073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1876175-1876226:-1:exon

position:1876175:-1
position: 1876175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1876226:-1
position: 1876226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1874590-1874644:-1:exon

position:1874590:-1
position: 1874590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874644:-1
position: 1874644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1874420-1874492:-1:exon

position:1874420:-1
position: 1874420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1874492:-1
position: 1874492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1873224-1873294:-1:exon

position:1873224:-1
position: 1873224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1873294:-1
position: 1873294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1872497-1872583:-1:exon

position:1872497:-1
position: 1872497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1872583:-1
position: 1872583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1866832-1866896:-1:exon

position:1866832:-1
position: 1866832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1866896:-1
position: 1866896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1866237-1866376:-1:exon

position:1866237:-1
position: 1866237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1866376:-1
position: 1866376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1864985-1865229:-1:exon

position:1865229:-1
position: 1865229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

POLB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: POLB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA polymerase beta
translation: MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPQKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVHFITDTLSKGETKFMGVCQLPGKNDEKAYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE
SIO_010081: POLB
subclass of: SO_0000673
so part of: POLB
location: complement(join(1865135..1865229,1866237..1866376,1866832..1866896,1872497..1872583,1873224..1873294,1874420..1874492,1874590..1874644,1876175..1876226,1878024..1878073,1879460..1879518,1880124..1880198,1883584..1883650,1886054..1886111,1886382..1886442))
location: region:1865135-1886442:-1
so has part: feature:1886382-1886442:-1:exon
so has part: feature:1886054-1886111:-1:exon
so has part: feature:1883584-1883650:-1:exon
so has part: feature:1880124-1880198:-1:exon
so has part: feature:1879460-1879518:-1:exon
so has part: feature:1878024-1878073:-1:exon
so has part: feature:1876175-1876226:-1:exon
so has part: feature:1874590-1874644:-1:exon
so has part: feature:1874420-1874492:-1:exon
so has part: feature:1873224-1873294:-1:exon
so has part: feature:1872497-1872583:-1:exon
so has part: feature:1866832-1866896:-1:exon
so has part: feature:1866237-1866376:-1:exon
so has part: feature:1865135-1865229:-1:exon

XP_010975238.1
type: Protein
SIO_000068: ncbiprotein

position:1865135:-1
position: 1865135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1886442:-1
position: 1886442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1886382-1886442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1886054-1886111:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1883584-1883650:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1880124-1880198:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1879460-1879518:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1878024-1878073:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1876175-1876226:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1874590-1874644:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1874420-1874492:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1873224-1873294:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1872497-1872583:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1866832-1866896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1866237-1866376:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1865135-1865229:-1:exon

IKBKB
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1897888..1944860)
location: region:1897888-1944860:-1
so has part: feature:1897888-1944860:-1:exon
subclass of: SO_0000010

105086448
type: Gene
SIO_000068: ncbigene

position:1897888:-1
position: 1897888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944860:-1
position: 1944860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1897888-1944860:-1:exon

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IKBKB
product: inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031440029.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(1897888..1899235,1900298..1900388,1902544..1902665,1905044..1905191,1905364..1905463,1905550..1905599,1906689..1906798,1908262..1908323,1908482..1908633,1909152..1909275,1910060..1910174,1910760..1910954,1911238..1911367,1912536..1912643,1916318..1916442,1918499..1918588,1919551..1919639,1930363..1930432,1932883..1933000,1933854..1933948,1944003..1944136,1944647..1944860))
location: region:1897888-1944860:-1
so has part: feature:1944647-1944860:-1:exon
so has part: feature:1944003-1944136:-1:exon
so has part: feature:1933854-1933948:-1:exon
so has part: feature:1932883-1933000:-1:exon
so has part: feature:1930363-1930432:-1:exon
so has part: feature:1919551-1919639:-1:exon
so has part: feature:1918499-1918588:-1:exon
so has part: feature:1916318-1916442:-1:exon
so has part: feature:1912536-1912643:-1:exon
so has part: feature:1911238-1911367:-1:exon
so has part: feature:1910760-1910954:-1:exon
so has part: feature:1910060-1910174:-1:exon
so has part: feature:1909152-1909275:-1:exon
so has part: feature:1908482-1908633:-1:exon
so has part: feature:1908262-1908323:-1:exon
so has part: feature:1906689-1906798:-1:exon
so has part: feature:1905550-1905599:-1:exon
so has part: feature:1905364-1905463:-1:exon
so has part: feature:1905044-1905191:-1:exon
so has part: feature:1902544-1902665:-1:exon
so has part: feature:1900298-1900388:-1:exon
so has part: feature:1897888-1899235:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1944647-1944860:-1:exon

position:1944647:-1
position: 1944647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1944003-1944136:-1:exon

position:1944003:-1
position: 1944003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944136:-1
position: 1944136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1933854-1933948:-1:exon

position:1933854:-1
position: 1933854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933948:-1
position: 1933948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1932883-1933000:-1:exon

position:1932883:-1
position: 1932883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1933000:-1
position: 1933000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1930363-1930432:-1:exon

position:1930363:-1
position: 1930363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1930432:-1
position: 1930432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1919551-1919639:-1:exon

position:1919551:-1
position: 1919551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919639:-1
position: 1919639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1918499-1918588:-1:exon

position:1918499:-1
position: 1918499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1918588:-1
position: 1918588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1916318-1916442:-1:exon

position:1916318:-1
position: 1916318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1916442:-1
position: 1916442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1912536-1912643:-1:exon

position:1912536:-1
position: 1912536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1912643:-1
position: 1912643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1911238-1911367:-1:exon

position:1911238:-1
position: 1911238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1911367:-1
position: 1911367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1910760-1910954:-1:exon

position:1910760:-1
position: 1910760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910954:-1
position: 1910954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1910060-1910174:-1:exon

position:1910060:-1
position: 1910060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1910174:-1
position: 1910174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1909152-1909275:-1:exon

position:1909152:-1
position: 1909152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1909275:-1
position: 1909275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1908482-1908633:-1:exon

position:1908482:-1
position: 1908482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908633:-1
position: 1908633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1908262-1908323:-1:exon

position:1908262:-1
position: 1908262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908323:-1
position: 1908323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1906689-1906798:-1:exon

position:1906689:-1
position: 1906689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906798:-1
position: 1906798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1905550-1905599:-1:exon

position:1905550:-1
position: 1905550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905599:-1
position: 1905599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1905364-1905463:-1:exon

position:1905364:-1
position: 1905364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905463:-1
position: 1905463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1905044-1905191:-1:exon

position:1905044:-1
position: 1905044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1905191:-1
position: 1905191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1902544-1902665:-1:exon

position:1902544:-1
position: 1902544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1902665:-1
position: 1902665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1900298-1900388:-1:exon

position:1900298:-1
position: 1900298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1900388:-1
position: 1900388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1897888-1899235:-1:exon

position:1899235:-1
position: 1899235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IKBKB
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IKBKB
product: inhibitor of nuclear factor kappa B kinase subunit beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 20 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_031440030.1
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(1899132..1899235,1900298..1900388,1902544..1902665,1905044..1905191,1905364..1905463,1905550..1905599,1906689..1906798,1908262..1908323,1908482..1908633,1909152..1909275,1910060..1910174,1910760..1910954,1911238..1911367,1912536..1912643,1916318..1916442,1918499..1918588,1919551..1919639,1930363..1930432,1932883..1933000,1933854..1933948,1944003..1944136,1944323..1944436))
location: region:1899132-1944436:-1
so has part: feature:1944323-1944436:-1:exon
so has part: feature:1944003-1944136:-1:exon
so has part: feature:1933854-1933948:-1:exon
so has part: feature:1932883-1933000:-1:exon
so has part: feature:1930363-1930432:-1:exon
so has part: feature:1919551-1919639:-1:exon
so has part: feature:1918499-1918588:-1:exon
so has part: feature:1916318-1916442:-1:exon
so has part: feature:1912536-1912643:-1:exon
so has part: feature:1911238-1911367:-1:exon
so has part: feature:1910760-1910954:-1:exon
so has part: feature:1910060-1910174:-1:exon
so has part: feature:1909152-1909275:-1:exon
so has part: feature:1908482-1908633:-1:exon
so has part: feature:1908262-1908323:-1:exon
so has part: feature:1906689-1906798:-1:exon
so has part: feature:1905550-1905599:-1:exon
so has part: feature:1905364-1905463:-1:exon
so has part: feature:1905044-1905191:-1:exon
so has part: feature:1902544-1902665:-1:exon
so has part: feature:1900298-1900388:-1:exon
so has part: feature:1899132-1899235:-1:exon

position:1899132:-1
position: 1899132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944436:-1
position: 1944436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1944323-1944436:-1:exon

position:1944323:-1
position: 1944323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1944003-1944136:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1933854-1933948:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1932883-1933000:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1930363-1930432:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1919551-1919639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1918499-1918588:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1916318-1916442:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1912536-1912643:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1911238-1911367:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910760-1910954:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1910060-1910174:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1909152-1909275:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1908482-1908633:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1908262-1908323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1906689-1906798:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1905550-1905599:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1905364-1905463:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1905044-1905191:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1902544-1902665:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1900298-1900388:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1899132-1899235:-1:exon

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSETDIVVSEDLNGTVKFSSSLPYPNNLNSILAQRLEKWLQLMLTWHPRQRGTDPVYGPNGCFKALDDILNLKLAHVLNMVTGTIHTYPVTEDESLQSLKARIQEDTGIAEEDQELLQEAGLALIPDKPAAQCISDGKLNEGRTLDMDLVFLFDNSRVTYETQVSPRPQPESVSCILQEPKRNLPFFQLRRVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYNEQTEFGITSDKLQLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMNEDEKMVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPGQLMSQPCTAPDSEAVKKSEELVAEAHTLCTQLENALQDTMKEQDQSLRSLDWSWLQTAEEEQNGLEQAS
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(1899170..1899235,1900298..1900388,1902544..1902665,1905044..1905191,1905364..1905463,1905550..1905599,1906689..1906798,1908262..1908323,1908482..1908633,1909152..1909275,1910060..1910174,1910760..1910954,1911238..1911367,1912536..1912643,1916318..1916442,1918499..1918588,1919551..1919639,1930363..1930432,1932883..1933000,1933854..1933948,1944003..1944107))
location: region:1899170-1944107:-1
so has part: feature:1944003-1944107:-1:exon
so has part: feature:1933854-1933948:-1:exon
so has part: feature:1932883-1933000:-1:exon
so has part: feature:1930363-1930432:-1:exon
so has part: feature:1919551-1919639:-1:exon
so has part: feature:1918499-1918588:-1:exon
so has part: feature:1916318-1916442:-1:exon
so has part: feature:1912536-1912643:-1:exon
so has part: feature:1911238-1911367:-1:exon
so has part: feature:1910760-1910954:-1:exon
so has part: feature:1910060-1910174:-1:exon
so has part: feature:1909152-1909275:-1:exon
so has part: feature:1908482-1908633:-1:exon
so has part: feature:1908262-1908323:-1:exon
so has part: feature:1906689-1906798:-1:exon
so has part: feature:1905550-1905599:-1:exon
so has part: feature:1905364-1905463:-1:exon
so has part: feature:1905044-1905191:-1:exon
so has part: feature:1902544-1902665:-1:exon
so has part: feature:1900298-1900388:-1:exon
so has part: feature:1899170-1899235:-1:exon

XP_031295889.1
type: Protein
SIO_000068: ncbiprotein

position:1899170:-1
position: 1899170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1944107:-1
position: 1944107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1944003-1944107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1933854-1933948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1932883-1933000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1930363-1930432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1919551-1919639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918499-1918588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1916318-1916442:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1912536-1912643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911238-1911367:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910760-1910954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910060-1910174:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1909152-1909275:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1908482-1908633:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1908262-1908323:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1906689-1906798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1905550-1905599:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1905364-1905463:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1905044-1905191:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1902544-1902665:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1900298-1900388:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1899170-1899235:-1:exon

IKBKB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IKBKB
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inhibitor of nuclear factor kappa-B kinase subunit beta
translation: MSWSPSLPTQTCGAWEMKERLGTGGFGNVIRWHNQETGEQIAIKQCRQELSPRNRERWCLEIQIMRRLNHPNVVAARDVPEGMQSLAPNDLPLLAMEYCQGGDLRKYLNQFENCCGLREGAILTLLSDIASALRYLHENRIIHRDLKPENIVLQQGEQRLIHKIIDLGYAKELDQGSLCTSFVGTLQYLAPELLEQQKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHSKVRQKSETDIVVSEDLNGTVKFSSSLPYPNNLNSILAQRLEKWLQLMLTWHPRQRGTDPVYGPNGCFKALDDILNLKLAHVLNMVTGTIHTYPVTEDESLQSLKARIQEDTGIAEEDQELLQEAGLALIPDKPAAQCISDGKLNEGRTLDMDLVFLFDNSRVTYETQVSPRPQPESVSCILQEPKRNLPFFQLRRVWGQVWHSIQALKEDCSRLQQGQRAAMMNLLRNNSCLSKMKNSMASMSQQLKAKLDFFKTSIQIDLEKYNEQTEFGITSDKLQLAWREMEQAVELCGRENEVKHLVERMMALQTDIVDLQRSPMGRKQGGTLDDLEEQARELYRRLREKPRDQRTDGDSQEMVRLLLQAIQGFEKKVRVIYTQLSKTVVCKQKALELLPKVEEVVSLMNEDEKMVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSHPGQLMSQPCTAPDSEAVKKSEELVAEAHTLCTQLENALQDTMKEQDQSLRSLDWSWLQTAEEEQNGLEQAS
SIO_010081: IKBKB
subclass of: SO_0000673
so part of: IKBKB
location: complement(join(1899170..1899235,1900298..1900388,1902544..1902665,1905044..1905191,1905364..1905463,1905550..1905599,1906689..1906798,1908262..1908323,1908482..1908633,1909152..1909275,1910060..1910174,1910760..1910954,1911238..1911367,1912536..1912643,1916318..1916442,1918499..1918588,1919551..1919639,1930363..1930432,1932883..1933000,1933854..1933948,1944003..1944107))
location: region:1899170-1944107:-1
so has part: feature:1944003-1944107:-1:exon
so has part: feature:1933854-1933948:-1:exon
so has part: feature:1932883-1933000:-1:exon
so has part: feature:1930363-1930432:-1:exon
so has part: feature:1919551-1919639:-1:exon
so has part: feature:1918499-1918588:-1:exon
so has part: feature:1916318-1916442:-1:exon
so has part: feature:1912536-1912643:-1:exon
so has part: feature:1911238-1911367:-1:exon
so has part: feature:1910760-1910954:-1:exon
so has part: feature:1910060-1910174:-1:exon
so has part: feature:1909152-1909275:-1:exon
so has part: feature:1908482-1908633:-1:exon
so has part: feature:1908262-1908323:-1:exon
so has part: feature:1906689-1906798:-1:exon
so has part: feature:1905550-1905599:-1:exon
so has part: feature:1905364-1905463:-1:exon
so has part: feature:1905044-1905191:-1:exon
so has part: feature:1902544-1902665:-1:exon
so has part: feature:1900298-1900388:-1:exon
so has part: feature:1899170-1899235:-1:exon

XP_031295890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1944003-1944107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1933854-1933948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1932883-1933000:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1930363-1930432:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1919551-1919639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1918499-1918588:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1916318-1916442:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1912536-1912643:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1911238-1911367:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1910760-1910954:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1910060-1910174:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1909152-1909275:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1908482-1908633:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1908262-1908323:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1906689-1906798:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1905550-1905599:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1905364-1905463:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1905044-1905191:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1902544-1902665:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1900298-1900388:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1899170-1899235:-1:exon

PLAT
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1981158..2005445
location: region:1981158-2005445:1
so has part: feature:1981158-2005445:1:exon
subclass of: SO_0000010

105086430
type: Gene
SIO_000068: ncbigene

position:1981158:1
position: 1981158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2005445:1
position: 2005445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981158-2005445:1:exon

PLAT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PLAT
product: plasminogen activator, tissue type
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_010976935.2
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(1981158..1981353,1991870..1991967,1992688..1992727,1994105..1994242,1995295..1995405,1995770..1995944,1996591..1996682,1997876..1998050,1999353..1999438,2000728..2000923,2001017..2001153,2001482..2001622,2002571..2002737,2004588..2005445)
location: region:1981158-2005445:1
so has part: feature:1981158-1981353:1:exon
so has part: feature:1991870-1991967:1:exon
so has part: feature:1992688-1992727:1:exon
so has part: feature:1994105-1994242:1:exon
so has part: feature:1995295-1995405:1:exon
so has part: feature:1995770-1995944:1:exon
so has part: feature:1996591-1996682:1:exon
so has part: feature:1997876-1998050:1:exon
so has part: feature:1999353-1999438:1:exon
so has part: feature:2000728-2000923:1:exon
so has part: feature:2001017-2001153:1:exon
so has part: feature:2001482-2001622:1:exon
so has part: feature:2002571-2002737:1:exon
so has part: feature:2004588-2005445:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981158-1981353:1:exon

position:1981353:1
position: 1981353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1991870-1991967:1:exon

position:1991870:1
position: 1991870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1991967:1
position: 1991967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1992688-1992727:1:exon

position:1992688:1
position: 1992688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1992727:1
position: 1992727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1994105-1994242:1:exon

position:1994105:1
position: 1994105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1994242:1
position: 1994242
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1995295-1995405:1:exon

position:1995295:1
position: 1995295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995405:1
position: 1995405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1995770-1995944:1:exon

position:1995770:1
position: 1995770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1995944:1
position: 1995944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1996591-1996682:1:exon

position:1996591:1
position: 1996591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996682:1
position: 1996682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1997876-1998050:1:exon

position:1997876:1
position: 1997876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1998050:1
position: 1998050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1999353-1999438:1:exon

position:1999353:1
position: 1999353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1999438:1
position: 1999438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2000728-2000923:1:exon

position:2000728:1
position: 2000728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2000923:1
position: 2000923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2001017-2001153:1:exon

position:2001017:1
position: 2001017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001153:1
position: 2001153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2001482-2001622:1:exon

position:2001482:1
position: 2001482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2001622:1
position: 2001622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2002571-2002737:1:exon

position:2002571:1
position: 2002571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2002737:1
position: 2002737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2004588-2005445:1:exon

position:2004588:1
position: 2004588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149096
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1984216..1989178)
location: region:1984216-1989178:-1
so has part: feature:1984216-1989178:-1:exon
subclass of: SO_0000011

116149096
type: Gene
SIO_000068: ncbigene

position:1984216:-1
position: 1984216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989178:-1
position: 1989178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1984216-1989178:-1:exon

LOC116149096
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149096
product: uncharacterized LOC116149096
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004132707.1
SIO_010081: LOC116149096
subclass of: SO_0000673
so part of: LOC116149096
location: complement(join(1984216..1987873,1988776..1988916,1989028..1989178))
location: region:1984216-1989178:-1
so has part: feature:1989028-1989178:-1:exon
so has part: feature:1988776-1988916:-1:exon
so has part: feature:1984216-1987873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1989028-1989178:-1:exon

position:1989028:-1
position: 1989028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1988776-1988916:-1:exon

position:1988776:-1
position: 1988776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988916:-1
position: 1988916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1984216-1987873:-1:exon

position:1987873:-1
position: 1987873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLAT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PLAT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tissue-type plasminogen activator
translation: MMNATRRGLLCVLLLWGAVFASPSQESHRRPRRGSRSRVTCRDEKTQMVYQQHESWLRPLLRGNRVEHCWCNGGQPQCHSVPVRSCSEPRCFNGGTCRQALYSSEFVCQCPEGFVGKRCEIDASATCYKDKGVTYRGTWSTVESGAECANWNSSGLASKPYSGRRPDAIKLGLGNHNYCRNPDQDSKPWCYVFKAGKYISEFCSTPACSKKDDGDCYFGKGLAYRGTRSLTTSGASCLPWNSMILIGKVYTAWKTNAQALGLGKHNHCRNPDGDTKPWCHVLKDRQLTWEYCDLPQCDTCGLRQYRQPQFRIKGGLFADITSHPWQAAIFAKHRRSPGERFLCGGILISSCWVLSAAHCFQERFPPHHLKVVLGRTYRLVPGEEEQVFEVEKYIVHKEFDDDIYDNDIALLQLKSDSLSCAQESDSVRTVCLPDADLQLPDWTECELSGYGKHEASSPFYSERLKEAHVRLYPSRRCTSQYLFNRTVTNNMLCAGDTRSGGNQDNLHDACQGDSGGPLVCMKDNHMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDNTRP
SIO_010081: PLAT
subclass of: SO_0000673
so part of: PLAT
location: join(1991893..1991967,1992688..1992727,1994105..1994242,1995295..1995405,1995770..1995944,1996591..1996682,1997876..1998050,1999353..1999438,2000728..2000923,2001017..2001153,2001482..2001622,2002571..2002737,2004588..2004746)
location: region:1991893-2004746:1
so has part: feature:1991893-1991967:1:exon
so has part: feature:1992688-1992727:1:exon
so has part: feature:1994105-1994242:1:exon
so has part: feature:1995295-1995405:1:exon
so has part: feature:1995770-1995944:1:exon
so has part: feature:1996591-1996682:1:exon
so has part: feature:1997876-1998050:1:exon
so has part: feature:1999353-1999438:1:exon
so has part: feature:2000728-2000923:1:exon
so has part: feature:2001017-2001153:1:exon
so has part: feature:2001482-2001622:1:exon
so has part: feature:2002571-2002737:1:exon
so has part: feature:2004588-2004746:1:exon

XP_010975237.1
type: Protein
SIO_000068: ncbiprotein

position:1991893:1
position: 1991893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2004746:1
position: 2004746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1991893-1991967:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1992688-1992727:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1994105-1994242:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1995295-1995405:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1995770-1995944:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1996591-1996682:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1997876-1998050:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1999353-1999438:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2000728-2000923:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2001017-2001153:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2001482-2001622:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2002571-2002737:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2004588-2004746:1:exon

LOC105086429
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2007333..2041077)
location: region:2007333-2041077:-1
so has part: feature:2007333-2041077:-1:exon
subclass of: SO_0000010

105086429
type: Gene
SIO_000068: ncbigene

position:2007333:-1
position: 2007333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2041077:-1
position: 2041077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2007333-2041077:-1:exon

LOC105086429
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086429
product: adaptor related protein complex 3 subunit mu 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440031.1
SIO_010081: LOC105086429
subclass of: SO_0000673
so part of: LOC105086429
location: complement(join(2007333..2010133,2011401..2011545,2011771..2011978,2013436..2013569,2013801..2013886,2028241..2028378,2034498..2034669,2039138..2039482,2040984..2041077))
location: region:2007333-2041077:-1
so has part: feature:2040984-2041077:-1:exon
so has part: feature:2039138-2039482:-1:exon
so has part: feature:2034498-2034669:-1:exon
so has part: feature:2028241-2028378:-1:exon
so has part: feature:2013801-2013886:-1:exon
so has part: feature:2013436-2013569:-1:exon
so has part: feature:2011771-2011978:-1:exon
so has part: feature:2011401-2011545:-1:exon
so has part: feature:2007333-2010133:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2040984-2041077:-1:exon

position:2040984:-1
position: 2040984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2039138-2039482:-1:exon

position:2039138:-1
position: 2039138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039482:-1
position: 2039482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2034498-2034669:-1:exon

position:2034498:-1
position: 2034498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2034669:-1
position: 2034669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2028241-2028378:-1:exon

position:2028241:-1
position: 2028241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2028378:-1
position: 2028378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2013801-2013886:-1:exon

position:2013801:-1
position: 2013801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2013886:-1
position: 2013886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2013436-2013569:-1:exon

position:2013436:-1
position: 2013436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2013569:-1
position: 2013569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2011771-2011978:-1:exon

position:2011771:-1
position: 2011771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2011978:-1
position: 2011978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2011401-2011545:-1:exon

position:2011401:-1
position: 2011401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2011545:-1
position: 2011545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2007333-2010133:-1:exon

position:2010133:-1
position: 2010133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105086429
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086429
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2
translation: MIHSLFLINSSGDIFLEKHWKSVVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSVYRHKIFFVAVVQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVRFKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSSSLGRFEITVGPKQTMGKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT
SIO_010081: LOC105086429
subclass of: SO_0000673
so part of: LOC105086429
location: complement(join(2010033..2010133,2011401..2011545,2011771..2011978,2013436..2013569,2013801..2013886,2028241..2028378,2034498..2034669,2039138..2039410))
location: region:2010033-2039410:-1
so has part: feature:2039138-2039410:-1:exon
so has part: feature:2034498-2034669:-1:exon
so has part: feature:2028241-2028378:-1:exon
so has part: feature:2013801-2013886:-1:exon
so has part: feature:2013436-2013569:-1:exon
so has part: feature:2011771-2011978:-1:exon
so has part: feature:2011401-2011545:-1:exon
so has part: feature:2010033-2010133:-1:exon

XP_031295891.1
type: Protein
SIO_000068: ncbiprotein

position:2010033:-1
position: 2010033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2039410:-1
position: 2039410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2039138-2039410:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2034498-2034669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2028241-2028378:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2013801-2013886:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2013436-2013569:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2011771-2011978:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2011401-2011545:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2010033-2010133:-1:exon

LOC116149098
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2022115..2025984
location: region:2022115-2025984:1
so has part: feature:2022115-2025984:1:exon
subclass of: SO_0000010

116149098
type: Gene
SIO_000068: ncbigene

position:2022115:1
position: 2022115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025984:1
position: 2025984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022115-2025984:1:exon

LOC116149098
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116149098
product: AP-3 complex subunit mu-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_031440032.1
SIO_010081: LOC116149098
subclass of: SO_0000673
so part of: LOC116149098
location: join(2022115..2022322,2025509..2025984)
location: region:2022115-2025984:1
so has part: feature:2022115-2022322:1:exon
so has part: feature:2025509-2025984:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2022115-2022322:1:exon

position:2022322:1
position: 2022322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2025509-2025984:1:exon

position:2025509:1
position: 2025509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149098
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116149098
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AP-3 complex subunit mu-2-like
translation: MLDNGFPLATESNILKELIKPPTILRTVVNTITGSTNVGDQLPTGQLSVVPWRRTGVKYTNNEAYFDVIEEIDAIIDKSGGCL
SIO_010081: LOC116149098
subclass of: SO_0000673
so part of: LOC116149098
location: join(2022223..2022322,2025509..2025660)
location: region:2022223-2025660:1
so has part: feature:2022223-2022322:1:exon
so has part: feature:2025509-2025660:1:exon

XP_031295892.1
type: Protein
SIO_000068: ncbiprotein

position:2022223:1
position: 2022223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2025660:1
position: 2025660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2022223-2022322:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2025509-2025660:1:exon

KAT6A
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2099461..2195409
location: region:2099461-2195409:1
so has part: feature:2099461-2195409:1:exon
subclass of: SO_0000010

105086447
type: Gene
SIO_000068: ncbigene

position:2099461:1
position: 2099461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2195409:1
position: 2195409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2099461-2195409:1:exon

KAT6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KAT6A
product: lysine acetyltransferase 6A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031440033.1
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(2099461..2099592,2100897..2101814,2147691..2147799,2151595..2151710,2152276..2152357,2154609..2154744,2156060..2156376,2158678..2158796,2167961..2168076,2178904..2179045,2180558..2180719,2182065..2182158,2184013..2184244,2184868..2185072,2186254..2186871,2189547..2189859,2189999..2195409)
location: region:2099461-2195409:1
so has part: feature:2099461-2099592:1:exon
so has part: feature:2100897-2101814:1:exon
so has part: feature:2147691-2147799:1:exon
so has part: feature:2151595-2151710:1:exon
so has part: feature:2152276-2152357:1:exon
so has part: feature:2154609-2154744:1:exon
so has part: feature:2156060-2156376:1:exon
so has part: feature:2158678-2158796:1:exon
so has part: feature:2167961-2168076:1:exon
so has part: feature:2178904-2179045:1:exon
so has part: feature:2180558-2180719:1:exon
so has part: feature:2182065-2182158:1:exon
so has part: feature:2184013-2184244:1:exon
so has part: feature:2184868-2185072:1:exon
so has part: feature:2186254-2186871:1:exon
so has part: feature:2189547-2189859:1:exon
so has part: feature:2189999-2195409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2099461-2099592:1:exon

position:2099592:1
position: 2099592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2100897-2101814:1:exon

position:2100897:1
position: 2100897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101814:1
position: 2101814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2147691-2147799:1:exon

position:2147691:1
position: 2147691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147799:1
position: 2147799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2151595-2151710:1:exon

position:2151595:1
position: 2151595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2151710:1
position: 2151710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2152276-2152357:1:exon

position:2152276:1
position: 2152276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2152357:1
position: 2152357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2154609-2154744:1:exon

position:2154609:1
position: 2154609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2154744:1
position: 2154744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2156060-2156376:1:exon

position:2156060:1
position: 2156060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2156376:1
position: 2156376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2158678-2158796:1:exon

position:2158678:1
position: 2158678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2158796:1
position: 2158796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2167961-2168076:1:exon

position:2167961:1
position: 2167961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2168076:1
position: 2168076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2178904-2179045:1:exon

position:2178904:1
position: 2178904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2179045:1
position: 2179045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2180558-2180719:1:exon

position:2180558:1
position: 2180558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180719:1
position: 2180719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2182065-2182158:1:exon

position:2182065:1
position: 2182065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2182158:1
position: 2182158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2184013-2184244:1:exon

position:2184013:1
position: 2184013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184244:1
position: 2184244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2184868-2185072:1:exon

position:2184868:1
position: 2184868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2185072:1
position: 2185072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2186254-2186871:1:exon

position:2186254:1
position: 2186254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2186871:1
position: 2186871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2189547-2189859:1:exon

position:2189547:1
position: 2189547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2189859:1
position: 2189859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2189999-2195409:1:exon

position:2189999:1
position: 2189999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

KAT6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT6A isoform X1
translation: MVKLANPLYTEWILEAIKKVKKQKQRPSEERICNAVSSSHGLDRKTVLEQLELSVKDGTILKVSNKGLNSYKDPDNPGRIALPKPRNHGKLDNKQNVDWNKLIKRAVEGLAESGGSTLKSIERFLKGQKDVSALFGGGAASGFHQQLRLAIKRAVGHGRLLKDGPLYRLNTKATNVDGKESCESLSSLPPVSLLPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQIKRRYANPIGRPKNRLKKQNTVSKSPFSKVRTGPGRGRKRKITLSSQSASSSEEGYLERIDGLDFCRDGSVPLKFNKKTKGLIDGLTKFFTPSPDGRKPRGEVVDYSEQYRIRKKGSRKSSTSDWPADNQDGWDGKQESEERLFGNQEVMTEKDMELFRDIQEQALQKVGVTGPPDPQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQNDKQISIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQDHMAKLQLNLRPVDVDPECLRWTPVIVSNSVVSEEEEEEAEEEQEEPQSQEGDLETSVGKAACRENKEPDSCSSVESEKKPEAPAAASSARLSKQALPRDSPPANSPPARRGRWPRKSRKAQDRFGDKDPKLLLEETSAPREQYGDCEEKPEPPPEQDAESEEPPAASQEQPGQDGKADAPRRRAGEGLELWRAPLRRSPEVLKCALPDGHDRLPRRYADGRFGDADRALLRGFSESSEEEEEPESPRSSSPPVLTKPTLKRKKPILHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEMDEEEEEEDEGDLFSRGYFHRLSSQDVLRCRSSSKRKSKDEDEDEESDDADDTPILKPVSLLRKCDVKDSPLEPDVSLPMKKKKGWPKGKSRKPIHWKKRPGRKPGFKLSREMVPVCAQECLMEPVVPLPKPGRKLRIQENEETIEPKEDLPLMEERKEEEELPAEAEEVEDGEEEDATGSDVRAASPADSSGPETEAKEPDVGEEEEKPRVPAEQHPAEEEPQEPEGPEPEEEEDGAAGTAQHEDHDADDEDDGHLESTKKEGPEERPSREDAREEPGGRESFLDTNMQSSRETAKDKDETEPDSEEEQTSQEASVVSEHMPGSEDDHEEDSNSKEELVELKEEEEIPHSELDLETVQAVQSLTREESGEHEAAYQDCDETLAACQTLQSYTQADEDPQLSLVEDCHASEHNSPMSSVQSHPSQSVRSVSSPSVPALESGYTQISPEQGSLSAPSMQNLETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNGSSQNSCSYGGLSSSSSLTQSSCVVTQQMAGMGSSCSMLQQNGVQPAANCSIKSPQSCVVERPPSNSSRAAARRAAPPAAAPPPPQPPPQPPQPPASSSRAQHAPAPQPPPRRRRPPQPRPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTMNLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPPAVAMQAGPRALAVQRGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGMMGSQAYTQQPMQPNPHGNMMYTGPSHHSYMNAAG…
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(2101215..2101814,2147691..2147799,2151595..2151710,2152276..2152357,2154609..2154744,2156060..2156376,2158678..2158796,2167961..2168076,2178904..2179045,2180558..2180719,2182065..2182158,2184013..2184244,2184868..2185072,2186254..2186871,2189547..2189859,2189999..2192679)
location: region:2101215-2192679:1
so has part: feature:2101215-2101814:1:exon
so has part: feature:2147691-2147799:1:exon
so has part: feature:2151595-2151710:1:exon
so has part: feature:2152276-2152357:1:exon
so has part: feature:2154609-2154744:1:exon
so has part: feature:2156060-2156376:1:exon
so has part: feature:2158678-2158796:1:exon
so has part: feature:2167961-2168076:1:exon
so has part: feature:2178904-2179045:1:exon
so has part: feature:2180558-2180719:1:exon
so has part: feature:2182065-2182158:1:exon
so has part: feature:2184013-2184244:1:exon
so has part: feature:2184868-2185072:1:exon
so has part: feature:2186254-2186871:1:exon
so has part: feature:2189547-2189859:1:exon
so has part: feature:2189999-2192679:1:exon

XP_031295893.1
type: Protein
SIO_000068: ncbiprotein

position:2101215:1
position: 2101215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2192679:1
position: 2192679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101215-2101814:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2147691-2147799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2151595-2151710:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152276-2152357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2154609-2154744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2156060-2156376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2158678-2158796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2167961-2168076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2178904-2179045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2180558-2180719:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2182065-2182158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2184013-2184244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2184868-2185072:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2186254-2186871:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2189547-2189859:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2189999-2192679:1:exon

KAT6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KAT6A
product: lysine acetyltransferase 6A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031440034.1
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(2103851..2104127,2147691..2147799,2151595..2151710,2152276..2152357,2154609..2154744,2156060..2156376,2158678..2158796,2167961..2168076,2178904..2179045,2180558..2180719,2182065..2182158,2184013..2184244,2184868..2185072,2186254..2186871,2189547..2189859,2189999..2195409)
location: region:2103851-2195409:1
so has part: feature:2103851-2104127:1:exon
so has part: feature:2147691-2147799:1:exon
so has part: feature:2151595-2151710:1:exon
so has part: feature:2152276-2152357:1:exon
so has part: feature:2154609-2154744:1:exon
so has part: feature:2156060-2156376:1:exon
so has part: feature:2158678-2158796:1:exon
so has part: feature:2167961-2168076:1:exon
so has part: feature:2178904-2179045:1:exon
so has part: feature:2180558-2180719:1:exon
so has part: feature:2182065-2182158:1:exon
so has part: feature:2184013-2184244:1:exon
so has part: feature:2184868-2185072:1:exon
so has part: feature:2186254-2186871:1:exon
so has part: feature:2189547-2189859:1:exon
so has part: feature:2189999-2195409:1:exon

position:2103851:1
position: 2103851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2103851-2104127:1:exon

position:2104127:1
position: 2104127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2147691-2147799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2151595-2151710:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152276-2152357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2154609-2154744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2156060-2156376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2158678-2158796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2167961-2168076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2178904-2179045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2180558-2180719:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2182065-2182158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2184013-2184244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2184868-2185072:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2186254-2186871:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2189547-2189859:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2189999-2195409:1:exon

KAT6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KAT6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone acetyltransferase KAT6A isoform X2
translation: MVWRTHIRLSTGLLSRGPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKKAAQIKRRYANPIGRPKNRLKKQNTVSKSPFSKVRTGPGRGRKRKITLSSQSASSSEEGYLERIDGLDFCRDGSVPLKFNKKTKGLIDGLTKFFTPSPDGRKPRGEVVDYSEQYRIRKKGSRKSSTSDWPADNQDGWDGKQESEERLFGNQEVMTEKDMELFRDIQEQALQKVGVTGPPDPQVRCPSVIEFGKYEIHTWYSSPYPQEYSRLPKLYLCEFCLKYMKSRTILQQHMKKCGWFHPPANEIYRKNNISVFEVDGNVSTIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTQNDVKGCHLVGYFSKEKHCQQKYNVSCIMILPQYQRKGYGRFLIDFSYLLSKREGQAGSPEKPLSDLGRLSYMAYWKSVILECLYHQNDKQISIKKLSKLTGICPQDITSTLHHLRMLDFRSDQFVIIRREKLIQDHMAKLQLNLRPVDVDPECLRWTPVIVSNSVVSEEEEEEAEEEQEEPQSQEGDLETSVGKAACRENKEPDSCSSVESEKKPEAPAAASSARLSKQALPRDSPPANSPPARRGRWPRKSRKAQDRFGDKDPKLLLEETSAPREQYGDCEEKPEPPPEQDAESEEPPAASQEQPGQDGKADAPRRRAGEGLELWRAPLRRSPEVLKCALPDGHDRLPRRYADGRFGDADRALLRGFSESSEEEEEPESPRSSSPPVLTKPTLKRKKPILHRRRRVRKRKHHNSSVVTETISETTEVLDEPFEDSDSERPMPRLEPTFEMDEEEEEEDEGDLFSRGYFHRLSSQDVLRCRSSSKRKSKDEDEDEESDDADDTPILKPVSLLRKCDVKDSPLEPDVSLPMKKKKGWPKGKSRKPIHWKKRPGRKPGFKLSREMVPVCAQECLMEPVVPLPKPGRKLRIQENEETIEPKEDLPLMEERKEEEELPAEAEEVEDGEEEDATGSDVRAASPADSSGPETEAKEPDVGEEEEKPRVPAEQHPAEEEPQEPEGPEPEEEEDGAAGTAQHEDHDADDEDDGHLESTKKEGPEERPSREDAREEPGGRESFLDTNMQSSRETAKDKDETEPDSEEEQTSQEASVVSEHMPGSEDDHEEDSNSKEELVELKEEEEIPHSELDLETVQAVQSLTREESGEHEAAYQDCDETLAACQTLQSYTQADEDPQLSLVEDCHASEHNSPMSSVQSHPSQSVRSVSSPSVPALESGYTQISPEQGSLSAPSMQNLETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNGSSQNSCSYGGLSSSSSLTQSSCVVTQQMAGMGSSCSMLQQNGVQPAANCSIKSPQSCVVERPPSNSSRAAARRAAPPAAAPPPPQPPPQPPQPPASSSRAQHAPAPQPPPRRRRPPQPRPPPQQQPPLSQCSMNNSFTPAPMIMEIPESGSTGNISIYERIPGDFGAGSYSQPSATFSLAKLQQLTNTIMDPHAMPYSHSPAVTSYATSVSLSNTGLAQLAPSHPLAGTPQAQATMTPPPNLASTTMNLTSPLLQCNMSATNIGIPHTQRLQGQMPVKGHISIRSKSAPLPSAAAHQQQLYGRSPPAVAMQAGPRALAVQRGMNMGVNLMPTPAYNVNSMNMNTLNAMNSYRMTQPMMNSSYHSNPAYMNQTAQYPMQMQMGMMGSQAYTQQPMQPNPHGNMMYTGPSHHSYMNAAGVPKQSLNGPYMRR
SIO_010081: KAT6A
subclass of: SO_0000673
so part of: KAT6A
location: join(2104077..2104127,2147691..2147799,2151595..2151710,2152276..2152357,2154609..2154744,2156060..2156376,2158678..2158796,2167961..2168076,2178904..2179045,2180558..2180719,2182065..2182158,2184013..2184244,2184868..2185072,2186254..2186871,2189547..2189859,2189999..2192679)
location: region:2104077-2192679:1
so has part: feature:2104077-2104127:1:exon
so has part: feature:2147691-2147799:1:exon
so has part: feature:2151595-2151710:1:exon
so has part: feature:2152276-2152357:1:exon
so has part: feature:2154609-2154744:1:exon
so has part: feature:2156060-2156376:1:exon
so has part: feature:2158678-2158796:1:exon
so has part: feature:2167961-2168076:1:exon
so has part: feature:2178904-2179045:1:exon
so has part: feature:2180558-2180719:1:exon
so has part: feature:2182065-2182158:1:exon
so has part: feature:2184013-2184244:1:exon
so has part: feature:2184868-2185072:1:exon
so has part: feature:2186254-2186871:1:exon
so has part: feature:2189547-2189859:1:exon
so has part: feature:2189999-2192679:1:exon

XP_031295894.1
type: Protein
SIO_000068: ncbiprotein

position:2104077:1
position: 2104077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2104077-2104127:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2147691-2147799:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2151595-2151710:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2152276-2152357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2154609-2154744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2156060-2156376:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2158678-2158796:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2167961-2168076:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2178904-2179045:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2180558-2180719:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2182065-2182158:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2184013-2184244:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2184868-2185072:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2186254-2186871:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2189547-2189859:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2189999-2192679:1:exon

LOC105086446
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2202044..2209658
location: region:2202044-2209658:1
so has part: feature:2202044-2209658:1:exon

105086446
type: Gene
SIO_000068: ncbigene

position:2202044:1
position: 2202044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2209658:1
position: 2209658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2202044-2209658:1:exon

LOC105086446
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105086446
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105086446
subclass of: SO_0000673
so part of: LOC105086446
location: 2202044..2202143
location: region:2202044-2202143:1
so has part: feature:2202044-2202143:1:exon

position:2202143:1
position: 2202143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2202044-2202143:1:exon

LOC105086446
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105086446
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105086446
subclass of: SO_0000673
so part of: LOC105086446
location: 2207116..2208089
location: region:2207116-2208089:1
so has part: feature:2207116-2208089:1:exon

position:2207116:1
position: 2207116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2208089:1
position: 2208089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2207116-2208089:1:exon

LOC105086446
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105086446
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105086446
subclass of: SO_0000673
so part of: LOC105086446
location: 2209611..2209658
location: region:2209611-2209658:1
so has part: feature:2209611-2209658:1:exon

position:2209611:1
position: 2209611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2209611-2209658:1:exon

ANK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2210640..2425095
location: region:2210640-2425095:1
so has part: feature:2210640-2425095:1:exon
subclass of: SO_0000010

105086428
type: Gene
SIO_000068: ncbigene

position:2210640:1
position: 2210640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425095:1
position: 2425095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210640-2425095:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ANK1
product: ankyrin 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440037.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2210640..2210922,2335909..2336010,2357590..2357688,2361646..2361744,2362296..2362394,2363370..2363555,2364547..2364645,2365070..2365168,2365437..2365535,2368264..2368461,2369851..2369949,2370392..2370490,2370968..2371066,2373014..2373211,2373785..2373883,2374319..2374417,2378416..2378613,2380708..2380806,2382577..2382675,2382903..2383001,2384007..2384099,2384556..2384628,2385322..2385345,2386215..2386311,2387343..2387421,2389373..2389470,2389554..2389778,2390696..2390850,2391135..2391346,2391815..2392019,2392321..2392417,2392675..2392903,2393956..2394081,2394194..2394313,2395379..2395457,2395751..2395825,2397163..2397294,2398582..2398728,2408688..2409249,2412172..2412469,2416558..2416641,2417635..2417700,2423981..2425059)
location: region:2210640-2425059:1
so has part: feature:2210640-2210922:1:exon
so has part: feature:2335909-2336010:1:exon
so has part: feature:2357590-2357688:1:exon
so has part: feature:2361646-2361744:1:exon
so has part: feature:2362296-2362394:1:exon
so has part: feature:2363370-2363555:1:exon
so has part: feature:2364547-2364645:1:exon
so has part: feature:2365070-2365168:1:exon
so has part: feature:2365437-2365535:1:exon
so has part: feature:2368264-2368461:1:exon
so has part: feature:2369851-2369949:1:exon
so has part: feature:2370392-2370490:1:exon
so has part: feature:2370968-2371066:1:exon
so has part: feature:2373014-2373211:1:exon
so has part: feature:2373785-2373883:1:exon
so has part: feature:2374319-2374417:1:exon
so has part: feature:2378416-2378613:1:exon
so has part: feature:2380708-2380806:1:exon
so has part: feature:2382577-2382675:1:exon
so has part: feature:2382903-2383001:1:exon
so has part: feature:2384007-2384099:1:exon
so has part: feature:2384556-2384628:1:exon
so has part: feature:2385322-2385345:1:exon
so has part: feature:2386215-2386311:1:exon
so has part: feature:2387343-2387421:1:exon
so has part: feature:2389373-2389470:1:exon
so has part: feature:2389554-2389778:1:exon
so has part: feature:2390696-2390850:1:exon
so has part: feature:2391135-2391346:1:exon
so has part: feature:2391815-2392019:1:exon
so has part: feature:2392321-2392417:1:exon
so has part: feature:2392675-2392903:1:exon
so has part: feature:2393956-2394081:1:exon
so has part: feature:2394194-2394313:1:exon
so has part: feature:2395379-2395457:1:exon
so has part: feature:2395751-2395825:1:exon
so has part: feature:2397163-2397294:1:exon
so has part: feature:2398582-2398728:1:exon
so has part: feature:2408688-2409249:1:exon
so has part: feature:2412172-2412469:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417700:1:exon
so has part: feature:2423981-2425059:1:exon

position:2425059:1
position: 2425059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210640-2210922:1:exon

position:2210922:1
position: 2210922
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:2335909-2336010:1:exon

position:2335909:1
position: 2335909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336010:1
position: 2336010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2357590-2357688:1:exon

position:2357590:1
position: 2357590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2357688:1
position: 2357688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2361646-2361744:1:exon

position:2361646:1
position: 2361646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2361744:1
position: 2361744
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:2362296-2362394:1:exon

position:2362296:1
position: 2362296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2362394:1
position: 2362394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2363370-2363555:1:exon

position:2363370:1
position: 2363370
reference: sequence
type: ForwardStrandPosition
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position:2363555:1
position: 2363555
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:2364547-2364645:1:exon

position:2364547:1
position: 2364547
reference: sequence
type: ForwardStrandPosition
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position:2364645:1
position: 2364645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2365070-2365168:1:exon

position:2365070:1
position: 2365070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2365168:1
position: 2365168
reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:2365437-2365535:1:exon

position:2365437:1
position: 2365437
reference: sequence
type: ForwardStrandPosition
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position:2365535:1
position: 2365535
reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:2368264-2368461:1:exon

position:2368264:1
position: 2368264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2368461:1
position: 2368461
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:2369851-2369949:1:exon

position:2369851:1
position: 2369851
reference: sequence
type: ForwardStrandPosition
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position:2369949:1
position: 2369949
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:2370392-2370490:1:exon

position:2370392:1
position: 2370392
reference: sequence
type: ForwardStrandPosition
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position:2370490:1
position: 2370490
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:2370968-2371066:1:exon

position:2370968:1
position: 2370968
reference: sequence
type: ForwardStrandPosition
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position:2371066:1
position: 2371066
reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:2373014-2373211:1:exon

position:2373014:1
position: 2373014
reference: sequence
type: ForwardStrandPosition
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position:2373211:1
position: 2373211
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:2373785-2373883:1:exon

position:2373785:1
position: 2373785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2373883:1
position: 2373883
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:2374319-2374417:1:exon

position:2374319:1
position: 2374319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2374417:1
position: 2374417
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:2378416-2378613:1:exon

position:2378416:1
position: 2378416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2378613:1
position: 2378613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2380708-2380806:1:exon

position:2380708:1
position: 2380708
reference: sequence
type: ForwardStrandPosition
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position:2380806:1
position: 2380806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2382577-2382675:1:exon

position:2382577:1
position: 2382577
reference: sequence
type: ForwardStrandPosition
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position:2382675:1
position: 2382675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2382903-2383001:1:exon

position:2382903:1
position: 2382903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2383001:1
position: 2383001
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:2384007-2384099:1:exon

position:2384007:1
position: 2384007
reference: sequence
type: ForwardStrandPosition
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position:2384099:1
position: 2384099
reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:2384556-2384628:1:exon

position:2384556:1
position: 2384556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2384628:1
position: 2384628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2385322-2385345:1:exon

position:2385322:1
position: 2385322
reference: sequence
type: ForwardStrandPosition
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position:2385345:1
position: 2385345
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 24
SIO_000628: feature:2386215-2386311:1:exon

position:2386215:1
position: 2386215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2386311:1
position: 2386311
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:2387343-2387421:1:exon

position:2387343:1
position: 2387343
reference: sequence
type: ForwardStrandPosition
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position:2387421:1
position: 2387421
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:2389373-2389470:1:exon

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position: 2389373
reference: sequence
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position:2389470:1
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:2389554-2389778:1:exon

position:2389554:1
position: 2389554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2389778:1
position: 2389778
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:2390696-2390850:1:exon

position:2390696:1
position: 2390696
reference: sequence
type: ForwardStrandPosition
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position:2390850:1
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:2391135-2391346:1:exon

position:2391135:1
position: 2391135
reference: sequence
type: ForwardStrandPosition
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position:2391346:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:2391815-2392019:1:exon

position:2391815:1
position: 2391815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2392019:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 31
SIO_000628: feature:2392321-2392417:1:exon

position:2392321:1
position: 2392321
reference: sequence
type: ForwardStrandPosition
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position:2392417:1
position: 2392417
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:2392675-2392903:1:exon

position:2392675:1
position: 2392675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2392903:1
position: 2392903
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:2393956-2394081:1:exon

position:2393956:1
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reference: sequence
type: ForwardStrandPosition
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position:2394081:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:2394194-2394313:1:exon

position:2394194:1
position: 2394194
reference: sequence
type: ForwardStrandPosition
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position:2394313:1
position: 2394313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2395379-2395457:1:exon

position:2395379:1
position: 2395379
reference: sequence
type: ForwardStrandPosition
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position:2395457:1
position: 2395457
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 36
SIO_000628: feature:2395751-2395825:1:exon

position:2395751:1
position: 2395751
reference: sequence
type: ForwardStrandPosition
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position:2395825:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 37
SIO_000628: feature:2397163-2397294:1:exon

position:2397163:1
position: 2397163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2397294:1
position: 2397294
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 38
SIO_000628: feature:2398582-2398728:1:exon

position:2398582:1
position: 2398582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2398728:1
position: 2398728
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 39
SIO_000628: feature:2408688-2409249:1:exon

position:2408688:1
position: 2408688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2409249:1
position: 2409249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:2412172-2412469:1:exon

position:2412172:1
position: 2412172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2412469:1
position: 2412469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:2416558-2416641:1:exon

position:2416558:1
position: 2416558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2416641:1
position: 2416641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:2417635-2417700:1:exon

position:2417635:1
position: 2417635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2417700:1
position: 2417700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2423981-2425059:1:exon

position:2423981:1
position: 2423981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ANK1
product: ankyrin 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440035.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2210643..2210922,2335909..2336010,2357590..2357688,2361646..2361744,2362296..2362394,2363370..2363555,2364547..2364645,2365070..2365168,2365437..2365535,2368264..2368461,2369851..2369949,2370392..2370490,2370968..2371066,2373014..2373211,2373785..2373883,2374319..2374417,2378416..2378613,2380708..2380806,2382577..2382675,2382903..2383001,2384007..2384099,2384556..2384628,2385322..2385345,2386215..2386311,2387343..2387421,2389373..2389470,2389554..2389778,2390696..2390850,2391135..2391346,2391815..2392019,2392321..2392417,2392675..2392903,2393956..2394081,2394194..2394313,2395379..2395457,2395751..2395825,2397163..2397294,2398582..2398728,2408688..2409249,2412172..2412469,2416558..2416641,2417635..2417775,2417986..2418120,2419945..2423973)
location: region:2210643-2423973:1
so has part: feature:2210643-2210922:1:exon
so has part: feature:2335909-2336010:1:exon
so has part: feature:2357590-2357688:1:exon
so has part: feature:2361646-2361744:1:exon
so has part: feature:2362296-2362394:1:exon
so has part: feature:2363370-2363555:1:exon
so has part: feature:2364547-2364645:1:exon
so has part: feature:2365070-2365168:1:exon
so has part: feature:2365437-2365535:1:exon
so has part: feature:2368264-2368461:1:exon
so has part: feature:2369851-2369949:1:exon
so has part: feature:2370392-2370490:1:exon
so has part: feature:2370968-2371066:1:exon
so has part: feature:2373014-2373211:1:exon
so has part: feature:2373785-2373883:1:exon
so has part: feature:2374319-2374417:1:exon
so has part: feature:2378416-2378613:1:exon
so has part: feature:2380708-2380806:1:exon
so has part: feature:2382577-2382675:1:exon
so has part: feature:2382903-2383001:1:exon
so has part: feature:2384007-2384099:1:exon
so has part: feature:2384556-2384628:1:exon
so has part: feature:2385322-2385345:1:exon
so has part: feature:2386215-2386311:1:exon
so has part: feature:2387343-2387421:1:exon
so has part: feature:2389373-2389470:1:exon
so has part: feature:2389554-2389778:1:exon
so has part: feature:2390696-2390850:1:exon
so has part: feature:2391135-2391346:1:exon
so has part: feature:2391815-2392019:1:exon
so has part: feature:2392321-2392417:1:exon
so has part: feature:2392675-2392903:1:exon
so has part: feature:2393956-2394081:1:exon
so has part: feature:2394194-2394313:1:exon
so has part: feature:2395379-2395457:1:exon
so has part: feature:2395751-2395825:1:exon
so has part: feature:2397163-2397294:1:exon
so has part: feature:2398582-2398728:1:exon
so has part: feature:2408688-2409249:1:exon
so has part: feature:2412172-2412469:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417775:1:exon
so has part: feature:2417986-2418120:1:exon
so has part: feature:2419945-2423973:1:exon

position:2210643:1
position: 2210643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2423973:1
position: 2423973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210643-2210922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2335909-2336010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2357590-2357688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2361646-2361744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2362296-2362394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363370-2363555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364547-2364645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365070-2365168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2365437-2365535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368264-2368461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2369851-2369949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2370392-2370490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2370968-2371066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2373014-2373211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2373785-2373883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2374319-2374417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2378416-2378613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380708-2380806:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382577-2382675:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2382903-2383001:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384007-2384099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2384556-2384628:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385322-2385345:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386215-2386311:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2387343-2387421:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2389373-2389470:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2389554-2389778:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2390696-2390850:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2391135-2391346:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2391815-2392019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2392321-2392417:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2392675-2392903:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2393956-2394081:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2394194-2394313:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2395379-2395457:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2395751-2395825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2397163-2397294:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2398582-2398728:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2408688-2409249:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2412172-2412469:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2417635-2417775:1:exon

position:2417775:1
position: 2417775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:2417986-2418120:1:exon

position:2417986:1
position: 2417986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2418120:1
position: 2418120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:2419945-2423973:1:exon

position:2419945:1
position: 2419945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X3
translation: MAQAAKQLKKIKDIEAQALQEQKEKEESNRKRRNRSRDRKKKADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGANVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVEAALALLEKDASQACMTKKGFTPLHVAAKYGKVRVAELLLEHDAHPNAAGKSGLTPLHVAVHHNHLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQMEVARSLLQYGALANAESVQGVTPLHLAAQEGHAEMVALLLSRQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDVVTLLLRNGASPNEVSSNGTTPLAIARRLGYISVTDVLKVVTDETSVVSVSDKHRMSFPETVDEILDVSEDEGTAHITIMGEELVSSKAEKQDSRDVDEEKELLDFVPKLDQVVESPAIPRIPCVTPETVVIRPEEPEQASKEYDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHNGLRVVVPPRTCAAPTRITCRLVKPQKLPTPPPLAEEEGLASRVIALGPTGVQFLSPVIVEIPHFASPGRGDRELVVLRSENGSVWKEHKSRYGESYLDQLLNGMDEELESLEELEKRRVCRIITTDFPLYFVVMSRLCQDYDTIGPEGGSLKSQLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSVIGGTDQAQWEDITGTTKLVYANECATFTTNVSARFWLSDCPRTAEAVNFASLLYKELTAVPYTARFVIFAKMTDPREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVLEGMPLFAELSGNLVPVKKAAQQRSFLFQSFRENRLVIPVKVRDSSREPGGSLSFLRKAMKYEDTQHILCHLNITMPPCTKGSGADERRRTLTPLGLKYSIFSESTLGVLSGMDRADMKMAIISEHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSAALLNLWVVREGQNAKMENLYAALRSIDRSELVNMLENSSRQSRNLKPERRHAERDYSSSPSQMNGYSSLQDELLSPASLHYALPSPLRADQYWSEVAAVIDAIPLAATEHDAMLEMSDIQVWSAGLTPSLVTAEDSSLECSKAEDSDATGHEWKLEGVLSEGPQGPALGSLDLVEDDTVDSDATNGLIDLLEQEEGQRSEEKLPSHERQEDSTGAGQDSENEVSLVSGQQRVQARIPESPTMSRVTDSSQDRLQDWDAEGSIVSYLQEATQGSWPEEVPRGPHSFQRRVSAVGGLEPSRSQEDEEDLASATEHVRVKQPQADSPRAGREQRRQSPRERLQEADSAFSHVVQENELQNIPGEQVTEEHFTDEQGNVVTKKIIRKVVRQIEPSGADDTQEHGEAHTSTPNP
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2210797..2210922,2335909..2336010,2357590..2357688,2361646..2361744,2362296..2362394,2363370..2363555,2364547..2364645,2365070..2365168,2365437..2365535,2368264..2368461,2369851..2369949,2370392..2370490,2370968..2371066,2373014..2373211,2373785..2373883,2374319..2374417,2378416..2378613,2380708..2380806,2382577..2382675,2382903..2383001,2384007..2384099,2384556..2384628,2385322..2385345,2386215..2386311,2387343..2387421,2389373..2389470,2389554..2389778,2390696..2390850,2391135..2391346,2391815..2392019,2392321..2392417,2392675..2392903,2393956..2394081,2394194..2394313,2395379..2395457,2395751..2395825,2397163..2397294,2398582..2398728,2408688..2409249,2412172..2412469,2416558..2416641,2417635..2417700,2423981..2424007)
location: region:2210797-2424007:1
so has part: feature:2210797-2210922:1:exon
so has part: feature:2335909-2336010:1:exon
so has part: feature:2357590-2357688:1:exon
so has part: feature:2361646-2361744:1:exon
so has part: feature:2362296-2362394:1:exon
so has part: feature:2363370-2363555:1:exon
so has part: feature:2364547-2364645:1:exon
so has part: feature:2365070-2365168:1:exon
so has part: feature:2365437-2365535:1:exon
so has part: feature:2368264-2368461:1:exon
so has part: feature:2369851-2369949:1:exon
so has part: feature:2370392-2370490:1:exon
so has part: feature:2370968-2371066:1:exon
so has part: feature:2373014-2373211:1:exon
so has part: feature:2373785-2373883:1:exon
so has part: feature:2374319-2374417:1:exon
so has part: feature:2378416-2378613:1:exon
so has part: feature:2380708-2380806:1:exon
so has part: feature:2382577-2382675:1:exon
so has part: feature:2382903-2383001:1:exon
so has part: feature:2384007-2384099:1:exon
so has part: feature:2384556-2384628:1:exon
so has part: feature:2385322-2385345:1:exon
so has part: feature:2386215-2386311:1:exon
so has part: feature:2387343-2387421:1:exon
so has part: feature:2389373-2389470:1:exon
so has part: feature:2389554-2389778:1:exon
so has part: feature:2390696-2390850:1:exon
so has part: feature:2391135-2391346:1:exon
so has part: feature:2391815-2392019:1:exon
so has part: feature:2392321-2392417:1:exon
so has part: feature:2392675-2392903:1:exon
so has part: feature:2393956-2394081:1:exon
so has part: feature:2394194-2394313:1:exon
so has part: feature:2395379-2395457:1:exon
so has part: feature:2395751-2395825:1:exon
so has part: feature:2397163-2397294:1:exon
so has part: feature:2398582-2398728:1:exon
so has part: feature:2408688-2409249:1:exon
so has part: feature:2412172-2412469:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417700:1:exon
so has part: feature:2423981-2424007:1:exon

XP_031295897.1
type: Protein
SIO_000068: ncbiprotein

position:2210797:1
position: 2210797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2424007:1
position: 2424007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210797-2210922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2335909-2336010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2357590-2357688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2361646-2361744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2362296-2362394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363370-2363555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364547-2364645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365070-2365168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2365437-2365535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368264-2368461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2369851-2369949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2370392-2370490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2370968-2371066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2373014-2373211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2373785-2373883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2374319-2374417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2378416-2378613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380708-2380806:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382577-2382675:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2382903-2383001:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384007-2384099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2384556-2384628:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385322-2385345:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386215-2386311:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2387343-2387421:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2389373-2389470:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2389554-2389778:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2390696-2390850:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2391135-2391346:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2391815-2392019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2392321-2392417:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2392675-2392903:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2393956-2394081:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2394194-2394313:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2395379-2395457:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2395751-2395825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2397163-2397294:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2398582-2398728:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2408688-2409249:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2412172-2412469:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2417635-2417700:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2423981-2424007:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X1
translation: MAQAAKQLKKIKDIEAQALQEQKEKEESNRKRRNRSRDRKKKADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGANVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVEAALALLEKDASQACMTKKGFTPLHVAAKYGKVRVAELLLEHDAHPNAAGKSGLTPLHVAVHHNHLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQMEVARSLLQYGALANAESVQGVTPLHLAAQEGHAEMVALLLSRQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDVVTLLLRNGASPNEVSSNGTTPLAIARRLGYISVTDVLKVVTDETSVVSVSDKHRMSFPETVDEILDVSEDEGTAHITIMGEELVSSKAEKQDSRDVDEEKELLDFVPKLDQVVESPAIPRIPCVTPETVVIRPEEPEQASKEYDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHNGLRVVVPPRTCAAPTRITCRLVKPQKLPTPPPLAEEEGLASRVIALGPTGVQFLSPVIVEIPHFASPGRGDRELVVLRSENGSVWKEHKSRYGESYLDQLLNGMDEELESLEELEKRRVCRIITTDFPLYFVVMSRLCQDYDTIGPEGGSLKSQLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSVIGGTDQAQWEDITGTTKLVYANECATFTTNVSARFWLSDCPRTAEAVNFASLLYKELTAVPYTARFVIFAKMTDPREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVLEGMPLFAELSGNLVPVKKAAQQRSFLFQSFRENRLVIPVKVRDSSREPGGSLSFLRKAMKYEDTQHILCHLNITMPPCTKGSGADERRRTLTPLGLKYSIFSESTLGVLSGMDRADMKMAIISEHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSAALLNLWVVREGQNAKMENLYAALRSIDRSELVNMLENSSRQSRNLKPERRHAERDYSSSPSQMNGYSSLQDELLSPASLHYALPSPLRADQYWSEVAAVIDAIPLAATEHDAMLEMSDIQVWSAGLTPSLVTAEDSSLECSKAEDSDATGHEWKLEGVLSEGPQGPALGSLDLVEDDTVDSDATNGLIDLLEQEEGQRSEEKLPSHERQEDSTGAGQDSENEVSLVSGQQRVQARIPESPTMSRVTDSSQDRLQDWDAEGSIVSYLQEATQGSWPEEVPRGPHSFQRRVSAVGGLEPSRSQEDEEDLASATEHVRVKQPQADSPRAGREQRRQSPRERLQEADSAFSHVVQENELQNIPGEQVTEEHFTDEQGNVVTKKIIRKVVRQIEPSGADDTQEHGEVISEGPLEDPSEMEADIDFFMPHTKVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2210797..2210922,2335909..2336010,2357590..2357688,2361646..2361744,2362296..2362394,2363370..2363555,2364547..2364645,2365070..2365168,2365437..2365535,2368264..2368461,2369851..2369949,2370392..2370490,2370968..2371066,2373014..2373211,2373785..2373883,2374319..2374417,2378416..2378613,2380708..2380806,2382577..2382675,2382903..2383001,2384007..2384099,2384556..2384628,2385322..2385345,2386215..2386311,2387343..2387421,2389373..2389470,2389554..2389778,2390696..2390850,2391135..2391346,2391815..2392019,2392321..2392417,2392675..2392903,2393956..2394081,2394194..2394313,2395379..2395457,2395751..2395825,2397163..2397294,2398582..2398728,2408688..2409249,2412172..2412469,2416558..2416641,2417635..2417775,2417986..2418084)
location: region:2210797-2418084:1
so has part: feature:2210797-2210922:1:exon
so has part: feature:2335909-2336010:1:exon
so has part: feature:2357590-2357688:1:exon
so has part: feature:2361646-2361744:1:exon
so has part: feature:2362296-2362394:1:exon
so has part: feature:2363370-2363555:1:exon
so has part: feature:2364547-2364645:1:exon
so has part: feature:2365070-2365168:1:exon
so has part: feature:2365437-2365535:1:exon
so has part: feature:2368264-2368461:1:exon
so has part: feature:2369851-2369949:1:exon
so has part: feature:2370392-2370490:1:exon
so has part: feature:2370968-2371066:1:exon
so has part: feature:2373014-2373211:1:exon
so has part: feature:2373785-2373883:1:exon
so has part: feature:2374319-2374417:1:exon
so has part: feature:2378416-2378613:1:exon
so has part: feature:2380708-2380806:1:exon
so has part: feature:2382577-2382675:1:exon
so has part: feature:2382903-2383001:1:exon
so has part: feature:2384007-2384099:1:exon
so has part: feature:2384556-2384628:1:exon
so has part: feature:2385322-2385345:1:exon
so has part: feature:2386215-2386311:1:exon
so has part: feature:2387343-2387421:1:exon
so has part: feature:2389373-2389470:1:exon
so has part: feature:2389554-2389778:1:exon
so has part: feature:2390696-2390850:1:exon
so has part: feature:2391135-2391346:1:exon
so has part: feature:2391815-2392019:1:exon
so has part: feature:2392321-2392417:1:exon
so has part: feature:2392675-2392903:1:exon
so has part: feature:2393956-2394081:1:exon
so has part: feature:2394194-2394313:1:exon
so has part: feature:2395379-2395457:1:exon
so has part: feature:2395751-2395825:1:exon
so has part: feature:2397163-2397294:1:exon
so has part: feature:2398582-2398728:1:exon
so has part: feature:2408688-2409249:1:exon
so has part: feature:2412172-2412469:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417775:1:exon
so has part: feature:2417986-2418084:1:exon

XP_031295895.1
type: Protein
SIO_000068: ncbiprotein

position:2418084:1
position: 2418084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2210797-2210922:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2335909-2336010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2357590-2357688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2361646-2361744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2362296-2362394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363370-2363555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364547-2364645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365070-2365168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2365437-2365535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368264-2368461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2369851-2369949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2370392-2370490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2370968-2371066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2373014-2373211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2373785-2373883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2374319-2374417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2378416-2378613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380708-2380806:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382577-2382675:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2382903-2383001:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384007-2384099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2384556-2384628:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385322-2385345:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386215-2386311:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2387343-2387421:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2389373-2389470:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2389554-2389778:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2390696-2390850:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2391135-2391346:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2391815-2392019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2392321-2392417:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2392675-2392903:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2393956-2394081:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2394194-2394313:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2395379-2395457:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2395751-2395825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2397163-2397294:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2398582-2398728:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2408688-2409249:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2412172-2412469:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2417635-2417775:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2417986-2418084:1:exon

LOC105086427
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086427
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2293622..2307766)
location: region:2293622-2307766:-1
so has part: feature:2293622-2307766:-1:exon
subclass of: SO_0000011

105086427
type: Gene
SIO_000068: ncbigene

position:2293622:-1
position: 2293622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2307766:-1
position: 2307766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2293622-2307766:-1:exon

LOC105086427
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105086427
product: uncharacterized LOC105086427
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_836923.2
SIO_010081: LOC105086427
subclass of: SO_0000673
so part of: LOC105086427
location: complement(join(2293622..2294031,2307027..2307141,2307237..2307766))
location: region:2293622-2307766:-1
so has part: feature:2307237-2307766:-1:exon
so has part: feature:2307027-2307141:-1:exon
so has part: feature:2293622-2294031:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2307237-2307766:-1:exon

position:2307237:-1
position: 2307237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2307027-2307141:-1:exon

position:2307027:-1
position: 2307027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2307141:-1
position: 2307141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2293622-2294031:-1:exon

position:2294031:-1
position: 2294031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ANK1
product: ankyrin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031440036.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2328848..2329499,2335909..2336010,2357590..2357688,2361646..2361744,2362296..2362394,2363370..2363555,2364547..2364645,2365070..2365168,2365437..2365535,2368264..2368461,2369851..2369949,2370392..2370490,2370968..2371066,2373014..2373211,2373785..2373883,2374319..2374417,2378416..2378613,2380708..2380806,2382577..2382675,2382903..2383001,2384007..2384099,2384556..2384628,2385322..2385345,2386215..2386311,2387343..2387421,2389373..2389470,2389554..2389778,2390696..2390850,2391135..2391346,2391815..2392019,2392321..2392417,2392675..2392903,2393956..2394081,2394194..2394313,2395379..2395457,2395751..2395825,2397163..2397294,2398582..2398728,2408688..2409249,2412172..2412469,2416558..2416641,2417635..2417775,2417986..2418120,2423981..2425059)
location: region:2328848-2425059:1
so has part: feature:2328848-2329499:1:exon
so has part: feature:2335909-2336010:1:exon
so has part: feature:2357590-2357688:1:exon
so has part: feature:2361646-2361744:1:exon
so has part: feature:2362296-2362394:1:exon
so has part: feature:2363370-2363555:1:exon
so has part: feature:2364547-2364645:1:exon
so has part: feature:2365070-2365168:1:exon
so has part: feature:2365437-2365535:1:exon
so has part: feature:2368264-2368461:1:exon
so has part: feature:2369851-2369949:1:exon
so has part: feature:2370392-2370490:1:exon
so has part: feature:2370968-2371066:1:exon
so has part: feature:2373014-2373211:1:exon
so has part: feature:2373785-2373883:1:exon
so has part: feature:2374319-2374417:1:exon
so has part: feature:2378416-2378613:1:exon
so has part: feature:2380708-2380806:1:exon
so has part: feature:2382577-2382675:1:exon
so has part: feature:2382903-2383001:1:exon
so has part: feature:2384007-2384099:1:exon
so has part: feature:2384556-2384628:1:exon
so has part: feature:2385322-2385345:1:exon
so has part: feature:2386215-2386311:1:exon
so has part: feature:2387343-2387421:1:exon
so has part: feature:2389373-2389470:1:exon
so has part: feature:2389554-2389778:1:exon
so has part: feature:2390696-2390850:1:exon
so has part: feature:2391135-2391346:1:exon
so has part: feature:2391815-2392019:1:exon
so has part: feature:2392321-2392417:1:exon
so has part: feature:2392675-2392903:1:exon
so has part: feature:2393956-2394081:1:exon
so has part: feature:2394194-2394313:1:exon
so has part: feature:2395379-2395457:1:exon
so has part: feature:2395751-2395825:1:exon
so has part: feature:2397163-2397294:1:exon
so has part: feature:2398582-2398728:1:exon
so has part: feature:2408688-2409249:1:exon
so has part: feature:2412172-2412469:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417775:1:exon
so has part: feature:2417986-2418120:1:exon
so has part: feature:2423981-2425059:1:exon

position:2328848:1
position: 2328848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2328848-2329499:1:exon

position:2329499:1
position: 2329499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2335909-2336010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2357590-2357688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2361646-2361744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2362296-2362394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363370-2363555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364547-2364645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365070-2365168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2365437-2365535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368264-2368461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2369851-2369949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2370392-2370490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2370968-2371066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2373014-2373211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2373785-2373883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2374319-2374417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2378416-2378613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380708-2380806:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382577-2382675:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2382903-2383001:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384007-2384099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2384556-2384628:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385322-2385345:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386215-2386311:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2387343-2387421:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2389373-2389470:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2389554-2389778:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2390696-2390850:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2391135-2391346:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2391815-2392019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2392321-2392417:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2392675-2392903:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2393956-2394081:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2394194-2394313:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2395379-2395457:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2395751-2395825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2397163-2397294:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2398582-2398728:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2408688-2409249:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2412172-2412469:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2417635-2417775:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2417986-2418120:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:2423981-2425059:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X2
translation: MAARQGRSGPDAAADAATSFLRAARSGNLDKALDHLRNGVDINTCNQNGLNGLHLASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKGKVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGANVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCGHHRVAKVLLDKGAKPNSRALNGFTPLHIACKKNHIRVMELLLKTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQREASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVEAALALLEKDASQACMTKKGFTPLHVAAKYGKVRVAELLLEHDAHPNAAGKSGLTPLHVAVHHNHLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQMEVARSLLQYGALANAESVQGVTPLHLAAQEGHAEMVALLLSRQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVTVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDVVTLLLRNGASPNEVSSNGTTPLAIARRLGYISVTDVLKVVTDETSVVSVSDKHRMSFPETVDEILDVSEDEGTAHITIMGEELVSSKAEKQDSRDVDEEKELLDFVPKLDQVVESPAIPRIPCVTPETVVIRPEEPEQASKEYDEDSLIPSSPATETSDNISPVASPVHTGFLVSFMVDARGGSMRGSRHNGLRVVVPPRTCAAPTRITCRLVKPQKLPTPPPLAEEEGLASRVIALGPTGVQFLSPVIVEIPHFASPGRGDRELVVLRSENGSVWKEHKSRYGESYLDQLLNGMDEELESLEELEKRRVCRIITTDFPLYFVVMSRLCQDYDTIGPEGGSLKSQLVPLVQATFPENAVTKRVKLALQAQPVPDELVTKLLGNQATFSPIVTVEPRRRKFHRPIGLRIPLPPSWTDNPRDSGEGDTTSLRLLCSVIGGTDQAQWEDITGTTKLVYANECATFTTNVSARFWLSDCPRTAEAVNFASLLYKELTAVPYTARFVIFAKMTDPREGRLRCYCMTDDKVDKTLEQHENFVEVARSRDIEVLEGMPLFAELSGNLVPVKKAAQQRSFLFQSFRENRLVIPVKVRDSSREPGGSLSFLRKAMKYEDTQHILCHLNITMPPCTKGSGADERRRTLTPLGLKYSIFSESTLGVLSGMDRADMKMAIISEHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSAALLNLWVVREGQNAKMENLYAALRSIDRSELVNMLENSSRQSRNLKPERRHAERDYSSSPSQMNGYSSLQDELLSPASLHYALPSPLRADQYWSEVAAVIDAIPLAATEHDAMLEMSDIQVWSAGLTPSLVTAEDSSLECSKAEDSDATGHEWKLEGVLSEGPQGPALGSLDLVEDDTVDSDATNGLIDLLEQEEGQRSEEKLPSHERQEDSTGAGQDSENEVSLVSGQQRVQARIPESPTMSRVTDSSQDRLQDWDAEGSIVSYLQEATQGSWPEEVPRGPHSFQRRVSAVGGLEPSRSQEDEEDLASATEHVRVKQPQADSPRAGREQRRQSPRERLQEADSAFSHVVQENELQNIPGEQVTEEHFTDEQGNVVTKKIIRKVVRQIEPSGADDTQEHGEVISEGPLEDPSEMEADIDFFMPHTKVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2329461..2329499,2335909..2336010,2357590..2357688,2361646..2361744,2362296..2362394,2363370..2363555,2364547..2364645,2365070..2365168,2365437..2365535,2368264..2368461,2369851..2369949,2370392..2370490,2370968..2371066,2373014..2373211,2373785..2373883,2374319..2374417,2378416..2378613,2380708..2380806,2382577..2382675,2382903..2383001,2384007..2384099,2384556..2384628,2385322..2385345,2386215..2386311,2387343..2387421,2389373..2389470,2389554..2389778,2390696..2390850,2391135..2391346,2391815..2392019,2392321..2392417,2392675..2392903,2393956..2394081,2394194..2394313,2395379..2395457,2395751..2395825,2397163..2397294,2398582..2398728,2408688..2409249,2412172..2412469,2416558..2416641,2417635..2417775,2417986..2418084)
location: region:2329461-2418084:1
so has part: feature:2329461-2329499:1:exon
so has part: feature:2335909-2336010:1:exon
so has part: feature:2357590-2357688:1:exon
so has part: feature:2361646-2361744:1:exon
so has part: feature:2362296-2362394:1:exon
so has part: feature:2363370-2363555:1:exon
so has part: feature:2364547-2364645:1:exon
so has part: feature:2365070-2365168:1:exon
so has part: feature:2365437-2365535:1:exon
so has part: feature:2368264-2368461:1:exon
so has part: feature:2369851-2369949:1:exon
so has part: feature:2370392-2370490:1:exon
so has part: feature:2370968-2371066:1:exon
so has part: feature:2373014-2373211:1:exon
so has part: feature:2373785-2373883:1:exon
so has part: feature:2374319-2374417:1:exon
so has part: feature:2378416-2378613:1:exon
so has part: feature:2380708-2380806:1:exon
so has part: feature:2382577-2382675:1:exon
so has part: feature:2382903-2383001:1:exon
so has part: feature:2384007-2384099:1:exon
so has part: feature:2384556-2384628:1:exon
so has part: feature:2385322-2385345:1:exon
so has part: feature:2386215-2386311:1:exon
so has part: feature:2387343-2387421:1:exon
so has part: feature:2389373-2389470:1:exon
so has part: feature:2389554-2389778:1:exon
so has part: feature:2390696-2390850:1:exon
so has part: feature:2391135-2391346:1:exon
so has part: feature:2391815-2392019:1:exon
so has part: feature:2392321-2392417:1:exon
so has part: feature:2392675-2392903:1:exon
so has part: feature:2393956-2394081:1:exon
so has part: feature:2394194-2394313:1:exon
so has part: feature:2395379-2395457:1:exon
so has part: feature:2395751-2395825:1:exon
so has part: feature:2397163-2397294:1:exon
so has part: feature:2398582-2398728:1:exon
so has part: feature:2408688-2409249:1:exon
so has part: feature:2412172-2412469:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417775:1:exon
so has part: feature:2417986-2418084:1:exon

XP_031295896.1
type: Protein
SIO_000068: ncbiprotein

position:2329461:1
position: 2329461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2329461-2329499:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2335909-2336010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2357590-2357688:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2361646-2361744:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2362296-2362394:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2363370-2363555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2364547-2364645:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2365070-2365168:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2365437-2365535:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2368264-2368461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2369851-2369949:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2370392-2370490:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2370968-2371066:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2373014-2373211:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2373785-2373883:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2374319-2374417:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2378416-2378613:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2380708-2380806:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2382577-2382675:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2382903-2383001:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2384007-2384099:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2384556-2384628:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2385322-2385345:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2386215-2386311:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2387343-2387421:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2389373-2389470:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2389554-2389778:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2390696-2390850:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2391135-2391346:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2391815-2392019:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2392321-2392417:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2392675-2392903:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2393956-2394081:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2394194-2394313:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2395379-2395457:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2395751-2395825:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:2397163-2397294:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:2398582-2398728:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:2408688-2409249:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:2412172-2412469:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:2417635-2417775:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:2417986-2418084:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ANK1
product: ankyrin 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031440038.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2415427..2415906,2416558..2416641,2417635..2417775,2423981..2425095)
location: region:2415427-2425095:1
so has part: feature:2415427-2415906:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417775:1:exon
so has part: feature:2423981-2425095:1:exon

position:2415427:1
position: 2415427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2415427-2415906:1:exon

position:2415906:1
position: 2415906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2417635-2417775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423981-2425095:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ANK1
product: ankyrin 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_031440040.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2415431..2415906,2416558..2416641,2417635..2417700,2423981..2425095)
location: region:2415431-2425095:1
so has part: feature:2415431-2415906:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417700:1:exon
so has part: feature:2423981-2425095:1:exon

position:2415431:1
position: 2415431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2415431-2415906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2417635-2417700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423981-2425095:1:exon

ANK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ANK1
product: ankyrin 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031440039.1
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2415441..2415906,2416558..2416641,2417635..2417700,2417986..2418120,2423981..2425065)
location: region:2415441-2425065:1
so has part: feature:2415441-2415906:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417700:1:exon
so has part: feature:2417986-2418120:1:exon
so has part: feature:2423981-2425065:1:exon

position:2415441:1
position: 2415441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2425065:1
position: 2425065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2415441-2415906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2417635-2417700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2417986-2418120:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2423981-2425065:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X4
translation: MWTFVTQLLVTLVLLGFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETFSTRVVRRRVLLKENELQNIPGEQVTEEHFTDEQGNVVTKKIIRKVVRQIEPSGADDTQEHGEVISEGPLEDPSEMEADIDFFMPHTKAHTSTPNP
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2415688..2415906,2416558..2416641,2417635..2417775,2423981..2424007)
location: region:2415688-2424007:1
so has part: feature:2415688-2415906:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417775:1:exon
so has part: feature:2423981-2424007:1:exon

XP_031295898.1
type: Protein
SIO_000068: ncbiprotein

position:2415688:1
position: 2415688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2415688-2415906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2417635-2417775:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423981-2424007:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X6
translation: MWTFVTQLLVTLVLLGFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETFSTRVVRRRVLLKENELQNIPGEQVTEEHFTDEQGNVVTKKIIRKVVRQIEPSGADDTQEHGEAHTSTPNP
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2415688..2415906,2416558..2416641,2417635..2417700,2423981..2424007)
location: region:2415688-2424007:1
so has part: feature:2415688-2415906:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417700:1:exon
so has part: feature:2423981-2424007:1:exon

XP_031295900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2415688-2415906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2417635-2417700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2423981-2424007:1:exon

ANK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ANK1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin-1 isoform X5
translation: MWTFVTQLLVTLVLLGFFLVSCQNVMHIVRGSLCFVLKHIHQELDKELGESEGLSDDEETFSTRVVRRRVLLKENELQNIPGEQVTEEHFTDEQGNVVTKKIIRKVVRQIEPSGADDTQEHGEVELRGSGLQPDLIEGRKGAQIVKRASLKRGKQ
SIO_010081: ANK1
subclass of: SO_0000673
so part of: ANK1
location: join(2415688..2415906,2416558..2416641,2417635..2417700,2417986..2418084)
location: region:2415688-2418084:1
so has part: feature:2415688-2415906:1:exon
so has part: feature:2416558-2416641:1:exon
so has part: feature:2417635-2417700:1:exon
so has part: feature:2417986-2418084:1:exon

XP_031295899.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2415688-2415906:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2416558-2416641:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2417635-2417700:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2417986-2418084:1:exon

NKX6-3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2428539..2433933
location: region:2428539-2433933:1
so has part: feature:2428539-2433933:1:exon
subclass of: SO_0000010

105086445
type: Gene
SIO_000068: ncbigene

position:2428539:1
position: 2428539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2433933:1
position: 2433933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428539-2433933:1:exon

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031440042.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2428539..2428739,2428988..2429351,2431132..2431301,2431554..2431611,2432622..2433933)
location: region:2428539-2433933:1
so has part: feature:2428539-2428739:1:exon
so has part: feature:2428988-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2431554-2431611:1:exon
so has part: feature:2432622-2433933:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2428539-2428739:1:exon

position:2428739:1
position: 2428739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2428988-2429351:1:exon

position:2428988:1
position: 2428988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2429351:1
position: 2429351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2431132-2431301:1:exon

position:2431132:1
position: 2431132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431301:1
position: 2431301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2431554-2431611:1:exon

position:2431554:1
position: 2431554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2431611:1
position: 2431611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2432622-2433933:1:exon

position:2432622:1
position: 2432622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031440041.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2428541..2429351,2431132..2431301,2431554..2431611,2432622..2433933)
location: region:2428541-2433933:1
so has part: feature:2428541-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2431554-2431611:1:exon
so has part: feature:2432622-2433933:1:exon

position:2428541:1
position: 2428541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428541-2429351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431132-2431301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2431554-2431611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2432622-2433933:1:exon

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031440044.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2428545..2429351,2431132..2431301,2432634..2432956)
location: region:2428545-2432956:1
so has part: feature:2428545-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2432634-2432956:1:exon

position:2428545:1
position: 2428545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432956:1
position: 2432956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428545-2429351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431132-2431301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2432634-2432956:1:exon

position:2432634:1
position: 2432634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NKX6-3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NKX6-3
product: NK6 homeobox 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031440043.1
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2428550..2429351,2431132..2431301,2432622..2432944)
location: region:2428550-2432944:1
so has part: feature:2428550-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2432622-2432944:1:exon

position:2428550:1
position: 2428550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432944:1
position: 2432944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428550-2429351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431132-2431301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2432622-2432944:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X1
translation: MESNLQGPFLLNNAPLAQFSEMKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHMAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKQAGGGSHYSAEPSCSRSLAGVVPEPEDQVAEEERPGALVLHPPGPGRRGRGPHGLGERGRRVQQAAGSRLGRREDPAAAPQAPRRLLGAQPGGARRLTPAARPPASAASRSPAGR
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2428970..2429351,2431132..2431301,2431554..2431611,2432622..2432911)
location: region:2428970-2432911:1
so has part: feature:2428970-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2431554-2431611:1:exon
so has part: feature:2432622-2432911:1:exon

XP_031295901.1
type: Protein
SIO_000068: ncbiprotein

position:2428970:1
position: 2428970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2432911:1
position: 2432911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428970-2429351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431132-2431301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2431554-2431611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2432622-2432911:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X3
translation: MESNLQGPFLLNNAPLAQFSEMKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHMAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSALEPSSSTPRGPGGAGGDRTASENEDDEYNKPLDPDSDDEKIRLLLRKHRAAFSVLSLGAHGV
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2428970..2429351,2431132..2431301,2432622..2432855)
location: region:2428970-2432855:1
so has part: feature:2428970-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2432622-2432855:1:exon

XP_031295903.1
type: Protein
SIO_000068: ncbiprotein

position:2432855:1
position: 2432855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2428970-2429351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431132-2431301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2432622-2432855:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X4
translation: MESNLQGPFLLNNAPLAQFSEMKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHMAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKNRRTKWRKKSALEPSSSTPRGPGGAGGDRTASENEDDEYNKPLDPDSDDEKIRLLLRKHRAAFSVLSLGAHGV
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2428970..2429351,2431132..2431301,2432634..2432855)
location: region:2428970-2432855:1
so has part: feature:2428970-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2432634-2432855:1:exon

XP_031295904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2428970-2429351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431132-2431301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2432634-2432855:1:exon

NKX6-3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NKX6-3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: homeobox protein Nkx-6.3 isoform X2
translation: MKAPVCQYSMQNSFYKLSPPGLGPQLPAGTPHGITDILSRPVATPNSSLLSGYPHMAGFGGLGSQGVYYGPQVGNFSKAGSEYPTRTRNCWADTGQNWRGGRQCGNTPDPLSDSVHKKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKQAGGGSHYSAEPSCSRSLAGVVPEPEDQVAEEERPGALVLHPPGPGRRGRGPHGLGERGRRVQQAAGSRLGRREDPAAAPQAPRRLLGAQPGGARRLTPAARPPASAASRSPAGR
SIO_010081: NKX6-3
subclass of: SO_0000673
so part of: NKX6-3
location: join(2429033..2429351,2431132..2431301,2431554..2431611,2432622..2432911)
location: region:2429033-2432911:1
so has part: feature:2429033-2429351:1:exon
so has part: feature:2431132-2431301:1:exon
so has part: feature:2431554-2431611:1:exon
so has part: feature:2432622-2432911:1:exon

XP_031295902.1
type: Protein
SIO_000068: ncbiprotein

position:2429033:1
position: 2429033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2429033-2429351:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2431132-2431301:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2431554-2431611:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2432622-2432911:1:exon

GPAT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GPAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2447966..2476194)
location: region:2447966-2476194:-1
so has part: feature:2447966-2476194:-1:exon
subclass of: SO_0000010

105086426
type: Gene
SIO_000068: ncbigene

position:2447966:-1
position: 2447966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2476194:-1
position: 2476194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2447966-2476194:-1:exon

GPAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GPAT4
product: glycerol-3-phosphate acyltransferase 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 22 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_031440045.1
SIO_010081: GPAT4
subclass of: SO_0000673
so part of: GPAT4
location: complement(join(2447966..2448761,2449977..2450056,2450142..2450270,2452715..2452800,2453675..2453730,2454575..2454690,2455178..2455271,2455445..2455534,2456304..2456378,2457145..2457445,2457600..2457669,2465574..2466568,2476034..2476194))
location: region:2447966-2476194:-1
so has part: feature:2476034-2476194:-1:exon
so has part: feature:2465574-2466568:-1:exon
so has part: feature:2457600-2457669:-1:exon
so has part: feature:2457145-2457445:-1:exon
so has part: feature:2456304-2456378:-1:exon
so has part: feature:2455445-2455534:-1:exon
so has part: feature:2455178-2455271:-1:exon
so has part: feature:2454575-2454690:-1:exon
so has part: feature:2453675-2453730:-1:exon
so has part: feature:2452715-2452800:-1:exon
so has part: feature:2450142-2450270:-1:exon
so has part: feature:2449977-2450056:-1:exon
so has part: feature:2447966-2448761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2476034-2476194:-1:exon

position:2476034:-1
position: 2476034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2465574-2466568:-1:exon

position:2465574:-1
position: 2465574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2466568:-1
position: 2466568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2457600-2457669:-1:exon

position:2457600:-1
position: 2457600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457669:-1
position: 2457669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2457145-2457445:-1:exon

position:2457145:-1
position: 2457145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457445:-1
position: 2457445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2456304-2456378:-1:exon

position:2456304:-1
position: 2456304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2456378:-1
position: 2456378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2455445-2455534:-1:exon

position:2455445:-1
position: 2455445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2455534:-1
position: 2455534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2455178-2455271:-1:exon

position:2455178:-1
position: 2455178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2455271:-1
position: 2455271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2454575-2454690:-1:exon

position:2454575:-1
position: 2454575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2454690:-1
position: 2454690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2453675-2453730:-1:exon

position:2453675:-1
position: 2453675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2453730:-1
position: 2453730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2452715-2452800:-1:exon

position:2452715:-1
position: 2452715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2452800:-1
position: 2452800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2450142-2450270:-1:exon

position:2450142:-1
position: 2450142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2450270:-1
position: 2450270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2449977-2450056:-1:exon

position:2449977:-1
position: 2449977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2450056:-1
position: 2450056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2447966-2448761:-1:exon

position:2448761:-1
position: 2448761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GPAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate acyltransferase 4
translation: MFLLLPFDSLIVNLLGISLTVLFTLLLVFIIVPAVFGVSFGIRKLYMKTLLKIFAWATLRMERGAKEKNHQLYKPYTNGIIAKDPTSLEEEIKEIRRSGSSKALDNTPDFELSDIFYFCRKGMETIMDDEVTKRFSAEELESWNLLSRTNYNFQYISLRLTVLWGLGVLIRYCFLLPLRIALAFTGISLLVVGTTMVGYLPNGRLKEFLSKHVHLMCYRICVRALTAIITYHDRKNRPRNGGICVANHTSPIDVIILASDGYYAMVGQVHGGLMGVIQRAMVKACPHVWFERSEVKDRHLVAKRLTEHVQDKSKLPILIFPEGTCINNTSVMMFKKGSFEIGATVYPVAIKYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCSVWYLPPMTREAEEDAVQFANRVKSAIARQGGLVDLLWDGGLKREKVKDTFKEEQQKLYSKMIVGNQEDRSRS
SIO_010081: GPAT4
subclass of: SO_0000673
so part of: GPAT4
location: complement(join(2448653..2448761,2449977..2450056,2450142..2450270,2452715..2452800,2453675..2453730,2454575..2454690,2455178..2455271,2455445..2455534,2456304..2456378,2457145..2457445,2457600..2457669,2465574..2465738))
location: region:2448653-2465738:-1
so has part: feature:2465574-2465738:-1:exon
so has part: feature:2457600-2457669:-1:exon
so has part: feature:2457145-2457445:-1:exon
so has part: feature:2456304-2456378:-1:exon
so has part: feature:2455445-2455534:-1:exon
so has part: feature:2455178-2455271:-1:exon
so has part: feature:2454575-2454690:-1:exon
so has part: feature:2453675-2453730:-1:exon
so has part: feature:2452715-2452800:-1:exon
so has part: feature:2450142-2450270:-1:exon
so has part: feature:2449977-2450056:-1:exon
so has part: feature:2448653-2448761:-1:exon

XP_031295905.1
type: Protein
SIO_000068: ncbiprotein

position:2448653:-1
position: 2448653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2465738:-1
position: 2465738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465574-2465738:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2457600-2457669:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2457145-2457445:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2456304-2456378:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2455445-2455534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2455178-2455271:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2454575-2454690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2453675-2453730:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2452715-2452800:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2450142-2450270:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2449977-2450056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2448653-2448761:-1:exon

GINS4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2490966..2502182)
location: region:2490966-2502182:-1
so has part: feature:2490966-2502182:-1:exon
subclass of: SO_0000010

105086425
type: Gene
SIO_000068: ncbigene

position:2490966:-1
position: 2490966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2502182:-1
position: 2502182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2490966-2502182:-1:exon

GINS4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GINS4
product: GINS complex subunit 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010976931.2
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(2490966..2492044,2492141..2492231,2494519..2494607,2494766..2494863,2497364..2497477,2498388..2498474,2501250..2501364,2502013..2502182))
location: region:2490966-2502182:-1
so has part: feature:2502013-2502182:-1:exon
so has part: feature:2501250-2501364:-1:exon
so has part: feature:2498388-2498474:-1:exon
so has part: feature:2497364-2497477:-1:exon
so has part: feature:2494766-2494863:-1:exon
so has part: feature:2494519-2494607:-1:exon
so has part: feature:2492141-2492231:-1:exon
so has part: feature:2490966-2492044:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2502013-2502182:-1:exon

position:2502013:-1
position: 2502013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2501250-2501364:-1:exon

position:2501250:-1
position: 2501250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501364:-1
position: 2501364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2498388-2498474:-1:exon

position:2498388:-1
position: 2498388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498474:-1
position: 2498474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2497364-2497477:-1:exon

position:2497364:-1
position: 2497364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2497477:-1
position: 2497477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2494766-2494863:-1:exon

position:2494766:-1
position: 2494766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494863:-1
position: 2494863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2494519-2494607:-1:exon

position:2494519:-1
position: 2494519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494607:-1
position: 2494607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2492141-2492231:-1:exon

position:2492141:-1
position: 2492141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492231:-1
position: 2492231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2490966-2492044:-1:exon

position:2492044:-1
position: 2492044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GINS4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GINS4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication complex GINS protein SLD5
translation: MMTEELDVSGQDSDGGSEEVVLTPAELIDRLEQAWMNEKFAPELLETKSEIVECVIEQLDHMEENLRRAKKGDLKVSIHQMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTRGEGEPSSLSPEEFAFAKEYMTNTETYLKNVALKHMPPNLQKVDLLKAVPKPDLDSYVFLRVKERQENLLVEPETDEQRDYVIDLEEGSQHLIRYKTIAPLVASGAVQLI
SIO_010081: GINS4
subclass of: SO_0000673
so part of: GINS4
location: complement(join(2491948..2492044,2492141..2492231,2494519..2494607,2494766..2494863,2497364..2497477,2498388..2498474,2501250..2501348))
location: region:2491948-2501348:-1
so has part: feature:2501250-2501348:-1:exon
so has part: feature:2498388-2498474:-1:exon
so has part: feature:2497364-2497477:-1:exon
so has part: feature:2494766-2494863:-1:exon
so has part: feature:2494519-2494607:-1:exon
so has part: feature:2492141-2492231:-1:exon
so has part: feature:2491948-2492044:-1:exon

XP_010975233.1
type: Protein
SIO_000068: ncbiprotein

position:2491948:-1
position: 2491948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501348:-1
position: 2501348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2501250-2501348:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2498388-2498474:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2497364-2497477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2494766-2494863:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2494519-2494607:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2492141-2492231:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2491948-2492044:-1:exon

LOC116149101
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2502333..2506512
location: region:2502333-2506512:1
so has part: feature:2502333-2506512:1:exon
subclass of: SO_0000011

116149101
type: Gene
SIO_000068: ncbigene

position:2502333:1
position: 2502333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2506512:1
position: 2506512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2502333-2506512:1:exon

LOC116149101
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149101
product: uncharacterized LOC116149101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004132708.1
SIO_010081: LOC116149101
subclass of: SO_0000673
so part of: LOC116149101
location: join(2502333..2502501,2503494..2503757,2505333..2506512)
location: region:2502333-2506512:1
so has part: feature:2502333-2502501:1:exon
so has part: feature:2503494-2503757:1:exon
so has part: feature:2505333-2506512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2502333-2502501:1:exon

position:2502501:1
position: 2502501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2503494-2503757:1:exon

position:2503494:1
position: 2503494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503757:1
position: 2503757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2505333-2506512:1:exon

position:2505333:1
position: 2505333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GOLGA7
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2515440..2531637)
location: region:2515440-2531637:-1
so has part: feature:2515440-2531637:-1:exon
subclass of: SO_0000010

105086424
type: Gene
SIO_000068: ncbigene

position:2515440:-1
position: 2515440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2531637:-1
position: 2531637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2515440-2531637:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GOLGA7
product: golgin A7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031440051.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2515440..2516820,2519196..2519263,2520294..2520395,2526190..2526342,2531176..2531308,2531523..2531637))
location: region:2515440-2531637:-1
so has part: feature:2531523-2531637:-1:exon
so has part: feature:2531176-2531308:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519196-2519263:-1:exon
so has part: feature:2515440-2516820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2531523-2531637:-1:exon

position:2531523:-1
position: 2531523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2531176-2531308:-1:exon

position:2531176:-1
position: 2531176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2531308:-1
position: 2531308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2526190-2526342:-1:exon

position:2526190:-1
position: 2526190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2526342:-1
position: 2526342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2520294-2520395:-1:exon

position:2520294:-1
position: 2520294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2520395:-1
position: 2520395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2519196-2519263:-1:exon

position:2519196:-1
position: 2519196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2519263:-1
position: 2519263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2515440-2516820:-1:exon

position:2516820:-1
position: 2516820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GOLGA7
product: golgin A7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031440046.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2515440..2516820,2519196..2519258,2520294..2520395,2526190..2526342,2531176..2531308,2531523..2531632))
location: region:2515440-2531632:-1
so has part: feature:2531523-2531632:-1:exon
so has part: feature:2531176-2531308:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519196-2519258:-1:exon
so has part: feature:2515440-2516820:-1:exon

position:2531632:-1
position: 2531632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531523-2531632:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2531176-2531308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2519196-2519258:-1:exon

position:2519258:-1
position: 2519258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2515440-2516820:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GOLGA7
product: golgin A7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031440050.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2515440..2516820,2519196..2519258,2520294..2520395,2526190..2526342,2531176..2531308,2531574..2531598))
location: region:2515440-2531598:-1
so has part: feature:2531574-2531598:-1:exon
so has part: feature:2531176-2531308:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519196-2519258:-1:exon
so has part: feature:2515440-2516820:-1:exon

position:2531598:-1
position: 2531598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531574-2531598:-1:exon

position:2531574:-1
position: 2531574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2531176-2531308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2519196-2519258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2515440-2516820:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GOLGA7
product: golgin A7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031440047.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2515440..2516820,2519196..2519258,2520294..2520395,2526190..2526342,2531176..2531308,2531437..2531537))
location: region:2515440-2531537:-1
so has part: feature:2531437-2531537:-1:exon
so has part: feature:2531176-2531308:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519196-2519258:-1:exon
so has part: feature:2515440-2516820:-1:exon

position:2531537:-1
position: 2531537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531437-2531537:-1:exon

position:2531437:-1
position: 2531437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2531176-2531308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2519196-2519258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2515440-2516820:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GOLGA7
product: golgin A7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_031440049.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2515440..2516820,2519196..2519258,2520294..2520395,2526190..2526342,2531176..2531308,2531466..2531517))
location: region:2515440-2531517:-1
so has part: feature:2531466-2531517:-1:exon
so has part: feature:2531176-2531308:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519196-2519258:-1:exon
so has part: feature:2515440-2516820:-1:exon

position:2531517:-1
position: 2531517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531466-2531517:-1:exon

position:2531466:-1
position: 2531466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2531176-2531308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2519196-2519258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2515440-2516820:-1:exon

GOLGA7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GOLGA7
product: golgin A7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_031440048.1
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2515440..2516820,2519196..2519258,2520294..2520395,2526190..2526342,2531176..2531308,2531449..2531516))
location: region:2515440-2531516:-1
so has part: feature:2531449-2531516:-1:exon
so has part: feature:2531176-2531308:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519196-2519258:-1:exon
so has part: feature:2515440-2516820:-1:exon

position:2531516:-1
position: 2531516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531449-2531516:-1:exon

position:2531449:-1
position: 2531449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2531176-2531308:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2519196-2519258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2515440-2516820:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2519211..2519258,2520294..2520395,2526190..2526342,2531176..2531286))
location: region:2519211-2531286:-1
so has part: feature:2531176-2531286:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519211-2519258:-1:exon

XP_031295906.1
type: Protein
SIO_000068: ncbiprotein

position:2519211:-1
position: 2519211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2531286:-1
position: 2531286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531176-2531286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519211-2519258:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2519211..2519258,2520294..2520395,2526190..2526342,2531176..2531286))
location: region:2519211-2531286:-1
so has part: feature:2531176-2531286:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519211-2519258:-1:exon

XP_031295907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2531176-2531286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519211-2519258:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2519211..2519258,2520294..2520395,2526190..2526342,2531176..2531286))
location: region:2519211-2531286:-1
so has part: feature:2531176-2531286:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519211-2519258:-1:exon

XP_031295908.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2531176-2531286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519211-2519258:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2519211..2519258,2520294..2520395,2526190..2526342,2531176..2531286))
location: region:2519211-2531286:-1
so has part: feature:2531176-2531286:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519211-2519258:-1:exon

XP_031295909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2531176-2531286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519211-2519258:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X1
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVIEITIYEDRGMSSGR
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2519211..2519258,2520294..2520395,2526190..2526342,2531176..2531286))
location: region:2519211-2531286:-1
so has part: feature:2531176-2531286:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519211-2519258:-1:exon

XP_031295910.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2531176-2531286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519211-2519258:-1:exon

GOLGA7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GOLGA7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: golgin subfamily A member 7 isoform X2
translation: MRPQQSPVSGKVFIQRDYSSGTRCQFQTKFPAELENRIDRQQFEETVRTLNNLYAEAEKLGGQSYLEGCLACLTAYTIFLCMETHYEKVLKKVSKYIQEQNEKIYAPQGLLLTDPIERGLRVFRLKLPFMKTEA
SIO_010081: GOLGA7
subclass of: SO_0000673
so part of: GOLGA7
location: complement(join(2519225..2519263,2520294..2520395,2526190..2526342,2531176..2531286))
location: region:2519225-2531286:-1
so has part: feature:2531176-2531286:-1:exon
so has part: feature:2526190-2526342:-1:exon
so has part: feature:2520294-2520395:-1:exon
so has part: feature:2519225-2519263:-1:exon

XP_031295911.1
type: Protein
SIO_000068: ncbiprotein

position:2519225:-1
position: 2519225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531176-2531286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2526190-2526342:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2520294-2520395:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2519225-2519263:-1:exon

LOC116149102
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149102
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2531797..2544971
location: region:2531797-2544971:1
so has part: feature:2531797-2544971:1:exon
subclass of: SO_0000011

116149102
type: Gene
SIO_000068: ncbigene

position:2531797:1
position: 2531797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2544971:1
position: 2544971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2531797-2544971:1:exon

LOC116149102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149102
product: uncharacterized LOC116149102, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132710.1
SIO_010081: LOC116149102
subclass of: SO_0000673
so part of: LOC116149102
location: join(2531797..2533395,2534337..2535927,2536086..2536231,2536772..2536836,2544253..2544971)
location: region:2531797-2544971:1
so has part: feature:2531797-2533395:1:exon
so has part: feature:2534337-2535927:1:exon
so has part: feature:2536086-2536231:1:exon
so has part: feature:2536772-2536836:1:exon
so has part: feature:2544253-2544971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2531797-2533395:1:exon

position:2533395:1
position: 2533395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2534337-2535927:1:exon

position:2534337:1
position: 2534337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2535927:1
position: 2535927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2536086-2536231:1:exon

position:2536086:1
position: 2536086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2536231:1
position: 2536231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2536772-2536836:1:exon

position:2536772:1
position: 2536772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2536836:1
position: 2536836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2544253-2544971:1:exon

position:2544253:1
position: 2544253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149102
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149102
product: uncharacterized LOC116149102, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004132711.1
SIO_010081: LOC116149102
subclass of: SO_0000673
so part of: LOC116149102
location: join(2531797..2533395,2534337..2534429,2535714..2535927,2536086..2536231,2536772..2536836,2544253..2544971)
location: region:2531797-2544971:1
so has part: feature:2531797-2533395:1:exon
so has part: feature:2534337-2534429:1:exon
so has part: feature:2535714-2535927:1:exon
so has part: feature:2536086-2536231:1:exon
so has part: feature:2536772-2536836:1:exon
so has part: feature:2544253-2544971:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2531797-2533395:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2534337-2534429:1:exon

position:2534429:1
position: 2534429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2535714-2535927:1:exon

position:2535714:1
position: 2535714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2536086-2536231:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2536772-2536836:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2544253-2544971:1:exon

LOC116149264
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149264
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2547117..2547223)
location: region:2547117-2547223:-1
so has part: feature:2547117-2547223:-1:exon
subclass of: SO_0000623

116149264
type: Gene
SIO_000068: ncbigene

position:2547117:-1
position: 2547117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547223:-1
position: 2547223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2547117-2547223:-1:exon

LOC116149264
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116149264
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132880.1
SIO_010081: LOC116149264
subclass of: SO_0000673
so part of: LOC116149264
location: complement(2547117..2547223)
location: region:2547117-2547223:-1
so has part: feature:2547117-2547223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2547117-2547223:-1:exon

SFRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SFRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2639491..2675028
location: region:2639491-2675028:1
so has part: feature:2639491-2675028:1:exon
subclass of: SO_0000010

105086423
type: Gene
SIO_000068: ncbigene

position:2639491:1
position: 2639491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2675028:1
position: 2675028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2639491-2675028:1:exon

SFRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SFRP1
product: secreted frizzled related protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_010976928.2
SIO_010081: SFRP1
subclass of: SO_0000673
so part of: SFRP1
location: join(2639491..2640257,2644829..2644906,2671475..2675028)
location: region:2639491-2675028:1
so has part: feature:2639491-2640257:1:exon
so has part: feature:2644829-2644906:1:exon
so has part: feature:2671475-2675028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2639491-2640257:1:exon

position:2640257:1
position: 2640257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2644829-2644906:1:exon

position:2644829:1
position: 2644829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2644906:1
position: 2644906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2671475-2675028:1:exon

position:2671475:1
position: 2671475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SFRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SFRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: secreted frizzled-related protein 1
translation: MGGGRWAAAGVLLALAAGLLAAGSASEYDYVSFQSDIGAYQSGRFYTKPPQCVDIPVDLRLCHNVGYKKMVLPNLLEHETMAEVKQQASSWVPLLNKNCHIGTQVFLCSLFAPVCLDRPIYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKCDKFPEGDVCIAMTPPNATEASKPQGTPVCPPCDNELKSEAIIEHLCASEFALRMKIKEVKKENGDKKIVPKKKKPLKLGPIKKKELKRLVLYLKNGADCPCHQLDNLSHHFLILGRKVKGQYLLTAIHKWDKKNKEFKNFMKKMKTHECPTFQSVFK
SIO_010081: SFRP1
subclass of: SO_0000673
so part of: SFRP1
location: join(2639732..2640257,2644829..2644906,2671475..2671797)
location: region:2639732-2671797:1
so has part: feature:2639732-2640257:1:exon
so has part: feature:2644829-2644906:1:exon
so has part: feature:2671475-2671797:1:exon

XP_010975230.1
type: Protein
SIO_000068: ncbiprotein

position:2639732:1
position: 2639732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2671797:1
position: 2671797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2639732-2640257:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2644829-2644906:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2671475-2671797:1:exon

ZMAT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2844542..3129042
location: region:2844542-3129042:1
so has part: feature:2844542-3129042:1:exon
subclass of: SO_0000010

105086422
type: Gene
SIO_000068: ncbigene

position:2844542:1
position: 2844542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3129042:1
position: 3129042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2844542-3129042:1:exon

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031440052.1
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2844542..2844707,2902050..2902155,2949081..2949170,3006071..3006227,3092511..3092607,3127399..3129042)
location: region:2844542-3129042:1
so has part: feature:2844542-2844707:1:exon
so has part: feature:2902050-2902155:1:exon
so has part: feature:2949081-2949170:1:exon
so has part: feature:3006071-3006227:1:exon
so has part: feature:3092511-3092607:1:exon
so has part: feature:3127399-3129042:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2844542-2844707:1:exon

position:2844707:1
position: 2844707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2902050-2902155:1:exon

position:2902050:1
position: 2902050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2902155:1
position: 2902155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2949081-2949170:1:exon

position:2949081:1
position: 2949081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2949170:1
position: 2949170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3006071-3006227:1:exon

position:3006071:1
position: 3006071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3006227:1
position: 3006227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3092511-3092607:1:exon

position:3092511:1
position: 3092511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3092607:1
position: 3092607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3127399-3129042:1:exon

position:3127399:1
position: 3127399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZMAT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZMAT4
product: zinc finger matrin-type 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010976927.2
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2844543..2844707,2902050..2902155,2949081..2949170,3006071..3006227,3029305..3029532,3092511..3092607,3127399..3129042)
location: region:2844543-3129042:1
so has part: feature:2844543-2844707:1:exon
so has part: feature:2902050-2902155:1:exon
so has part: feature:2949081-2949170:1:exon
so has part: feature:3006071-3006227:1:exon
so has part: feature:3029305-3029532:1:exon
so has part: feature:3092511-3092607:1:exon
so has part: feature:3127399-3129042:1:exon

position:2844543:1
position: 2844543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2844543-2844707:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2902050-2902155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2949081-2949170:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3006071-3006227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3029305-3029532:1:exon

position:3029305:1
position: 3029305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3029532:1
position: 3029532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3092511-3092607:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3127399-3129042:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4 isoform X1
translation: MKSSDLDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKKLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTATPLGALKPPRVDAAPVVSSPYQRRDSDRYCGLCAAWFNNPLMAQQHYDGKKHKKNAARVALLEQLGTTLDTGELRGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2902054..2902155,2949081..2949170,3006071..3006227,3029305..3029532,3092511..3092607,3127399..3127414)
location: region:2902054-3127414:1
so has part: feature:2902054-2902155:1:exon
so has part: feature:2949081-2949170:1:exon
so has part: feature:3006071-3006227:1:exon
so has part: feature:3029305-3029532:1:exon
so has part: feature:3092511-3092607:1:exon
so has part: feature:3127399-3127414:1:exon

XP_010975229.1
type: Protein
SIO_000068: ncbiprotein

position:2902054:1
position: 2902054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3127414:1
position: 3127414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2902054-2902155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2949081-2949170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006071-3006227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3029305-3029532:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3092511-3092607:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3127399-3127414:1:exon

ZMAT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZMAT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger matrin-type protein 4 isoform X2
translation: MKSSDLDQDLFTDSYCKVCSAQLISESQRVAHYESRKHASKVRLYYMLHPRDGGCPAKKLRSENGSDADMVDKNKCCTLCNMSFTSAVVADSHYQGKIHAKRLKLLLGEKTPLKTTGLRRNYRCTICSVSLNSIEQYHAHLKGSKHQTNLKNK
SIO_010081: ZMAT4
subclass of: SO_0000673
so part of: ZMAT4
location: join(2902054..2902155,2949081..2949170,3006071..3006227,3092511..3092607,3127399..3127414)
location: region:2902054-3127414:1
so has part: feature:2902054-2902155:1:exon
so has part: feature:2949081-2949170:1:exon
so has part: feature:3006071-3006227:1:exon
so has part: feature:3092511-3092607:1:exon
so has part: feature:3127399-3127414:1:exon

XP_031295912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2902054-2902155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2949081-2949170:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3006071-3006227:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3092511-3092607:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3127399-3127414:1:exon

TRNAA-AGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-AGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2912803..2912874)
location: region:2912803-2912874:-1
so has part: feature:2912803-2912874:-1:exon
subclass of: SO_0000663

116149283
type: Gene
SIO_000068: ncbigene

position:2912803:-1
position: 2912803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2912874:-1
position: 2912874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2912803-2912874:-1:exon

TRNAA-AGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-AGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2912840..2912842),aa:Ala, seq:agc)
SIO_010081: TRNAA-AGC
subclass of: SO_0000673
so part of: TRNAA-AGC
location: complement(2912803..2912874)
location: region:2912803-2912874:-1
so has part: feature:2912803-2912874:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2912803-2912874:-1:exon

LOC116149104
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3337207..3346293
location: region:3337207-3346293:1
so has part: feature:3337207-3346293:1:exon
subclass of: SO_0000011

116149104
type: Gene
SIO_000068: ncbigene

position:3337207:1
position: 3337207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3346293:1
position: 3346293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3337207-3346293:1:exon

LOC116149104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149104
product: uncharacterized LOC116149104
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132712.1
SIO_010081: LOC116149104
subclass of: SO_0000673
so part of: LOC116149104
location: join(3337207..3337301,3339853..3339924,3340415..3341056,3341807..3341972,3345739..3346293)
location: region:3337207-3346293:1
so has part: feature:3337207-3337301:1:exon
so has part: feature:3339853-3339924:1:exon
so has part: feature:3340415-3341056:1:exon
so has part: feature:3341807-3341972:1:exon
so has part: feature:3345739-3346293:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3337207-3337301:1:exon

position:3337301:1
position: 3337301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3339853-3339924:1:exon

position:3339853:1
position: 3339853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3339924:1
position: 3339924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3340415-3341056:1:exon

position:3340415:1
position: 3340415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3341056:1
position: 3341056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3341807-3341972:1:exon

position:3341807:1
position: 3341807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3341972:1
position: 3341972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3345739-3346293:1:exon

position:3345739:1
position: 3345739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TCIM
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TCIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3355167..3356959)
location: region:3355167-3356959:-1
so has part: feature:3355167-3356959:-1:exon
subclass of: SO_0000010

105086421
type: Gene
SIO_000068: ncbigene

position:3355167:-1
position: 3355167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356959:-1
position: 3356959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355167-3356959:-1:exon

TCIM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TCIM
product: transcriptional and immune response regulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010976926.2
SIO_010081: TCIM
subclass of: SO_0000673
so part of: TCIM
location: complement(3355167..3356959)
location: region:3355167-3356959:-1
so has part: feature:3355167-3356959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3355167-3356959:-1:exon

TCIM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TCIM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcriptional and immune response regulator
translation: MKAKPRHAACTMSTSLRVSPSVHGYHFDTASRKKAVGNIFENIDQEALQRLFKNSGDKKAEERAKIIFARDQDLEEKTRALMALKKRTKDKLFQFLKLRKYSIKVH
SIO_010081: TCIM
subclass of: SO_0000673
so part of: TCIM
location: complement(3356571..3356891)
location: region:3356571-3356891:-1
so has part: feature:3356571-3356891:-1:exon

XP_010975228.1
type: Protein
SIO_000068: ncbiprotein

position:3356571:-1
position: 3356571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3356891:-1
position: 3356891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3356571-3356891:-1:exon

IDO2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3436093..3494552)
location: region:3436093-3494552:-1
so has part: feature:3436093-3494552:-1:exon
subclass of: SO_0000010

105105465
type: Gene
SIO_000068: ncbigene

position:3436093:-1
position: 3436093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494552:-1
position: 3494552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3436093-3494552:-1:exon

IDO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IDO2
product: indoleamine 2,3-dioxygenase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031440055.1
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3436093..3436824,3438017..3438165,3445949..3446000,3455338..3455455,3457305..3457404,3457667..3457681,3461227..3461345,3463378..3463497,3494249..3494552))
location: region:3436093-3494552:-1
so has part: feature:3494249-3494552:-1:exon
so has part: feature:3463378-3463497:-1:exon
so has part: feature:3461227-3461345:-1:exon
so has part: feature:3457667-3457681:-1:exon
so has part: feature:3457305-3457404:-1:exon
so has part: feature:3455338-3455455:-1:exon
so has part: feature:3445949-3446000:-1:exon
so has part: feature:3438017-3438165:-1:exon
so has part: feature:3436093-3436824:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3494249-3494552:-1:exon

position:3494249:-1
position: 3494249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3463378-3463497:-1:exon

position:3463378:-1
position: 3463378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3463497:-1
position: 3463497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3461227-3461345:-1:exon

position:3461227:-1
position: 3461227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3461345:-1
position: 3461345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3457667-3457681:-1:exon

position:3457667:-1
position: 3457667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3457681:-1
position: 3457681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3457305-3457404:-1:exon

position:3457305:-1
position: 3457305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3457404:-1
position: 3457404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3455338-3455455:-1:exon

position:3455338:-1
position: 3455338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3455455:-1
position: 3455455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3445949-3446000:-1:exon

position:3445949:-1
position: 3445949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3446000:-1
position: 3446000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3438017-3438165:-1:exon

position:3438017:-1
position: 3438017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3438165:-1
position: 3438165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3436093-3436824:-1:exon

position:3436824:-1
position: 3436824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IDO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IDO2
product: indoleamine 2,3-dioxygenase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_010999254.2
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3436093..3436824,3438017..3438165,3445949..3446000,3455338..3455455,3457305..3457404,3457667..3457681,3461227..3461345,3463378..3463497,3481430..3481525,3494249..3494381))
location: region:3436093-3494381:-1
so has part: feature:3494249-3494381:-1:exon
so has part: feature:3481430-3481525:-1:exon
so has part: feature:3463378-3463497:-1:exon
so has part: feature:3461227-3461345:-1:exon
so has part: feature:3457667-3457681:-1:exon
so has part: feature:3457305-3457404:-1:exon
so has part: feature:3455338-3455455:-1:exon
so has part: feature:3445949-3446000:-1:exon
so has part: feature:3438017-3438165:-1:exon
so has part: feature:3436093-3436824:-1:exon

position:3494381:-1
position: 3494381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3494249-3494381:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3481430-3481525:-1:exon

position:3481430:-1
position: 3481430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3481525:-1
position: 3481525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3463378-3463497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3461227-3461345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457667-3457681:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3457305-3457404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3455338-3455455:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3445949-3446000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3438017-3438165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3436093-3436824:-1:exon

IDO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IDO2
product: indoleamine 2,3-dioxygenase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031440056.1
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3436093..3436824,3438017..3438165,3445949..3446000,3455338..3455455,3457305..3457404,3457667..3457681,3461227..3461345,3463378..3463497,3463872..3464020))
location: region:3436093-3464020:-1
so has part: feature:3463872-3464020:-1:exon
so has part: feature:3463378-3463497:-1:exon
so has part: feature:3461227-3461345:-1:exon
so has part: feature:3457667-3457681:-1:exon
so has part: feature:3457305-3457404:-1:exon
so has part: feature:3455338-3455455:-1:exon
so has part: feature:3445949-3446000:-1:exon
so has part: feature:3438017-3438165:-1:exon
so has part: feature:3436093-3436824:-1:exon

position:3464020:-1
position: 3464020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3463872-3464020:-1:exon

position:3463872:-1
position: 3463872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3463378-3463497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3461227-3461345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3457667-3457681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457305-3457404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3455338-3455455:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3445949-3446000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3438017-3438165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3436093-3436824:-1:exon

IDO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 2 isoform X2
translation: MEPQSPNLKTTPSLTLGRFHISEDYGFLLPSPLMPLLSCQYLTGYREQRLAHLTLSFITMGYVWQEGETQPKEVLPRNLALPFVEVSRSVGLPPILTHSDLVLANWTARDPGRPLEIRNLDIIFSLPGGESLRGFILVIVLVENAAVPGIKALVQAVNAILQPSPESLLQALQRLRLSIQDIKGVLGQMHDYADPDVFYAVIRVFFSGWKDNPAMPAGLIYEGVSNEPLRYSGGSTAQSTVLQAFDEFLGIHHSEESADFLHKMRDYMPPSHKAFIEEIHSAPSLRDHILSSGNGQLLAAYNQCVEALVALRSYHIAMVTKYLITAAARAKGRRPSQLPGPPRALEERGTGGTVVLRFLKSVRDKTLEAILHQSG
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3436469..3436824,3438017..3438165,3445949..3446000,3455338..3455455,3457305..3457404,3457667..3457681,3461227..3461345,3463378..3463497,3494249..3494347))
location: region:3436469-3494347:-1
so has part: feature:3494249-3494347:-1:exon
so has part: feature:3463378-3463497:-1:exon
so has part: feature:3461227-3461345:-1:exon
so has part: feature:3457667-3457681:-1:exon
so has part: feature:3457305-3457404:-1:exon
so has part: feature:3455338-3455455:-1:exon
so has part: feature:3445949-3446000:-1:exon
so has part: feature:3438017-3438165:-1:exon
so has part: feature:3436469-3436824:-1:exon

XP_031295915.1
type: Protein
SIO_000068: ncbiprotein

position:3436469:-1
position: 3436469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494347:-1
position: 3494347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3494249-3494347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3463378-3463497:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3461227-3461345:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3457667-3457681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457305-3457404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3455338-3455455:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3445949-3446000:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3438017-3438165:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3436469-3436824:-1:exon

IDO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 2 isoform X1
translation: MEPQSPNLKTTPSLTLGRFHISEDYGFLLPSPLRELPDHYRPWMEIANQLPHLIESGQLRAQVDKMPLLSCQYLTGYREQRLAHLTLSFITMGYVWQEGETQPKEVLPRNLALPFVEVSRSVGLPPILTHSDLVLANWTARDPGRPLEIRNLDIIFSLPGGESLRGFILVIVLVENAAVPGIKALVQAVNAILQPSPESLLQALQRLRLSIQDIKGVLGQMHDYADPDVFYAVIRVFFSGWKDNPAMPAGLIYEGVSNEPLRYSGGSTAQSTVLQAFDEFLGIHHSEESADFLHKMRDYMPPSHKAFIEEIHSAPSLRDHILSSGNGQLLAAYNQCVEALVALRSYHIAMVTKYLITAAARAKGRRPSQLPGPPRALEERGTGGTVVLRFLKSVRDKTLEAILHQSG
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3436469..3436824,3438017..3438165,3445949..3446000,3455338..3455455,3457305..3457404,3457667..3457681,3461227..3461345,3463378..3463497,3481430..3481525,3494249..3494347))
location: region:3436469-3494347:-1
so has part: feature:3494249-3494347:-1:exon
so has part: feature:3481430-3481525:-1:exon
so has part: feature:3463378-3463497:-1:exon
so has part: feature:3461227-3461345:-1:exon
so has part: feature:3457667-3457681:-1:exon
so has part: feature:3457305-3457404:-1:exon
so has part: feature:3455338-3455455:-1:exon
so has part: feature:3445949-3446000:-1:exon
so has part: feature:3438017-3438165:-1:exon
so has part: feature:3436469-3436824:-1:exon

XP_010997556.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3494249-3494347:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3481430-3481525:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3463378-3463497:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3461227-3461345:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3457667-3457681:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3457305-3457404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3455338-3455455:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3445949-3446000:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3438017-3438165:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3436469-3436824:-1:exon

IDO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IDO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 2 isoform X3
translation: MPLLSCQYLTGYREQRLAHLTLSFITMGYVWQEGETQPKEVLPRNLALPFVEVSRSVGLPPILTHSDLVLANWTARDPGRPLEIRNLDIIFSLPGGESLRGFILVIVLVENAAVPGIKALVQAVNAILQPSPESLLQALQRLRLSIQDIKGVLGQMHDYADPDVFYAVIRVFFSGWKDNPAMPAGLIYEGVSNEPLRYSGGSTAQSTVLQAFDEFLGIHHSEESADFLHKMRDYMPPSHKAFIEEIHSAPSLRDHILSSGNGQLLAAYNQCVEALVALRSYHIAMVTKYLITAAARAKGRRPSQLPGPPRALEERGTGGTVVLRFLKSVRDKTLEAILHQSG
SIO_010081: IDO2
subclass of: SO_0000673
so part of: IDO2
location: complement(join(3436469..3436824,3438017..3438165,3445949..3446000,3455338..3455455,3457305..3457404,3457667..3457681,3461227..3461345,3463378..3463497))
location: region:3436469-3463497:-1
so has part: feature:3463378-3463497:-1:exon
so has part: feature:3461227-3461345:-1:exon
so has part: feature:3457667-3457681:-1:exon
so has part: feature:3457305-3457404:-1:exon
so has part: feature:3455338-3455455:-1:exon
so has part: feature:3445949-3446000:-1:exon
so has part: feature:3438017-3438165:-1:exon
so has part: feature:3436469-3436824:-1:exon

XP_031295916.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3463378-3463497:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3461227-3461345:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3457667-3457681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3457305-3457404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3455338-3455455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3445949-3446000:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3438017-3438165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3436469-3436824:-1:exon

IDO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: IDO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3506062..3520318)
location: region:3506062-3520318:-1
so has part: feature:3506062-3520318:-1:exon
subclass of: SO_0000010

105105464
type: Gene
SIO_000068: ncbigene

position:3506062:-1
position: 3506062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520318:-1
position: 3520318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3506062-3520318:-1:exon

IDO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: IDO1
product: indoleamine 2,3-dioxygenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_010999253.2
SIO_010081: IDO1
subclass of: SO_0000673
so part of: IDO1
location: complement(join(3506062..3506893,3507880..3508028,3508471..3508522,3509567..3509684,3510391..3510490,3512564..3512578,3513256..3513374,3516363..3516482,3516601..3516696,3520167..3520318))
location: region:3506062-3520318:-1
so has part: feature:3520167-3520318:-1:exon
so has part: feature:3516601-3516696:-1:exon
so has part: feature:3516363-3516482:-1:exon
so has part: feature:3513256-3513374:-1:exon
so has part: feature:3512564-3512578:-1:exon
so has part: feature:3510391-3510490:-1:exon
so has part: feature:3509567-3509684:-1:exon
so has part: feature:3508471-3508522:-1:exon
so has part: feature:3507880-3508028:-1:exon
so has part: feature:3506062-3506893:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3520167-3520318:-1:exon

position:3520167:-1
position: 3520167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3516601-3516696:-1:exon

position:3516601:-1
position: 3516601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3516696:-1
position: 3516696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3516363-3516482:-1:exon

position:3516363:-1
position: 3516363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3516482:-1
position: 3516482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3513256-3513374:-1:exon

position:3513256:-1
position: 3513256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3513374:-1
position: 3513374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3512564-3512578:-1:exon

position:3512564:-1
position: 3512564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3512578:-1
position: 3512578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3510391-3510490:-1:exon

position:3510391:-1
position: 3510391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3510490:-1
position: 3510490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3509567-3509684:-1:exon

position:3509567:-1
position: 3509567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3509684:-1
position: 3509684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3508471-3508522:-1:exon

position:3508471:-1
position: 3508471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508522:-1
position: 3508522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3507880-3508028:-1:exon

position:3507880:-1
position: 3507880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3508028:-1
position: 3508028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3506062-3506893:-1:exon

position:3506893:-1
position: 3506893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

IDO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: IDO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: indoleamine 2,3-dioxygenase 1
translation: MENSWKMFEEFHIDEEMGFALPNPLVELPHPYDAWISIARNLPQLIEDGQLRAEVEKLATLSTDGLEGHKEQRLGHLALGYLTMAYVWGRGDGDIRKVLPSNIAIPYCQLSEKLGLPPILVYADCVLANWKKKDPSGPMTYENMDILFSFPGGDCGKGFFLISLLVEMAAASAIKVIPIIFKAVQCEDSETLQDALREIASCLKRALERFHQIHDYVDPNIFFNVLRIYLSGWKGNPSLPEGLLYEGVWDTPKQFAGGSAAQSSVFQCFDVLLGVQHAAGGASSVSAAEFLQEMRTYMPPAHRNFLRSLESGPSVREFVLSKGDASLRETYNKCVQAMVSLRKYHFQIVTKYILIPARRKSKEKGTSKGSSKSEDKGTGGTSLVDFLKTVRRTTEKTLLKEG
SIO_010081: IDO1
subclass of: SO_0000673
so part of: IDO1
location: complement(join(3506529..3506893,3507880..3508028,3508471..3508522,3509567..3509684,3510391..3510490,3512564..3512578,3513256..3513374,3516363..3516482,3516601..3516696,3520167..3520241))
location: region:3506529-3520241:-1
so has part: feature:3520167-3520241:-1:exon
so has part: feature:3516601-3516696:-1:exon
so has part: feature:3516363-3516482:-1:exon
so has part: feature:3513256-3513374:-1:exon
so has part: feature:3512564-3512578:-1:exon
so has part: feature:3510391-3510490:-1:exon
so has part: feature:3509567-3509684:-1:exon
so has part: feature:3508471-3508522:-1:exon
so has part: feature:3507880-3508028:-1:exon
so has part: feature:3506529-3506893:-1:exon

XP_010997555.1
type: Protein
SIO_000068: ncbiprotein

position:3506529:-1
position: 3506529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3520241:-1
position: 3520241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3520167-3520241:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3516601-3516696:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3516363-3516482:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3513256-3513374:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3512564-3512578:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3510391-3510490:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3509567-3509684:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3508471-3508522:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3507880-3508028:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3506529-3506893:-1:exon

LOC105105466
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105105466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3536440..3587278)
location: region:3536440-3587278:-1
so has part: feature:3536440-3587278:-1:exon
subclass of: SO_0000010

105105466
type: Gene
SIO_000068: ncbigene

position:3536440:-1
position: 3536440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3587278:-1
position: 3587278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3536440-3587278:-1:exon

LOC105105466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105105466
product: disintegrin and metalloproteinase domain-containing protein 18-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031440054.1
SIO_010081: LOC105105466
subclass of: SO_0000673
so part of: LOC105105466
location: complement(join(3536440..3536911,3539953..3539957,3541711..3541829,3545106..3545186,3547385..3547568,3550912..3551017,3554345..3554543,3555104..3555199,3561729..3561912,3565416..3565552,3570923..3571004,3571751..3571917,3575817..3575882,3576209..3576386,3577376..3577452,3577802..3577880,3580166..3580221,3586370..3586446,3587045..3587278))
location: region:3536440-3587278:-1
so has part: feature:3587045-3587278:-1:exon
so has part: feature:3586370-3586446:-1:exon
so has part: feature:3580166-3580221:-1:exon
so has part: feature:3577802-3577880:-1:exon
so has part: feature:3577376-3577452:-1:exon
so has part: feature:3576209-3576386:-1:exon
so has part: feature:3575817-3575882:-1:exon
so has part: feature:3571751-3571917:-1:exon
so has part: feature:3570923-3571004:-1:exon
so has part: feature:3565416-3565552:-1:exon
so has part: feature:3561729-3561912:-1:exon
so has part: feature:3555104-3555199:-1:exon
so has part: feature:3554345-3554543:-1:exon
so has part: feature:3550912-3551017:-1:exon
so has part: feature:3547385-3547568:-1:exon
so has part: feature:3545106-3545186:-1:exon
so has part: feature:3541711-3541829:-1:exon
so has part: feature:3539953-3539957:-1:exon
so has part: feature:3536440-3536911:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3587045-3587278:-1:exon

position:3587045:-1
position: 3587045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3586370-3586446:-1:exon

position:3586370:-1
position: 3586370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3586446:-1
position: 3586446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3580166-3580221:-1:exon

position:3580166:-1
position: 3580166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3580221:-1
position: 3580221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3577802-3577880:-1:exon

position:3577802:-1
position: 3577802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3577880:-1
position: 3577880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3577376-3577452:-1:exon

position:3577376:-1
position: 3577376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3577452:-1
position: 3577452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3576209-3576386:-1:exon

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urn:…
SIO_000300: 7
SIO_000628: feature:3575817-3575882:-1:exon

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urn:…
SIO_000300: 8
SIO_000628: feature:3571751-3571917:-1:exon

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position:3571917:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:3570923-3571004:-1:exon

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urn:…
SIO_000300: 10
SIO_000628: feature:3565416-3565552:-1:exon

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urn:…
SIO_000300: 11
SIO_000628: feature:3561729-3561912:-1:exon

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urn:…
SIO_000300: 12
SIO_000628: feature:3555104-3555199:-1:exon

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urn:…
SIO_000300: 13
SIO_000628: feature:3554345-3554543:-1:exon

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