Camelus dromedarius isolate Drom800 breed African chromosome 25, CamDro3, whole genome shotgun sequence.
type: Entry
definition: Camelus dromedarius isolate Drom800 breed African chromosome 25, CamDro3, whole genome shotgun sequence.
sequence version: NC_044535.1
sequence date: 2019-10-23
sequence: sequence
division: CON
label: NC_044535.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565028
dblink: SAMN03252735
keyword: WGS
keyword: RefSeq
source: Camelus dromedarius (Arabian camel)
organism: Camelus dromedarius
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Camelus.
reference: 1
references: 30972949
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016651.2.\nAssembly name: CamDro3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vetmeduni Vienna on\n2019/10/07. The original whole-genome shotgun project has the\naccession JWIN00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vetmeduni Vienna\nAssembly Date :: FEB-2019\nAssembly Method :: ABySS v. 1.3.6; HiRise v. MAY-2017;\n PBJelly v. 15.8.24; Pilon v. 1.22; ABySS\n Sealer v. 2.0.2; HiRise v. MAY-2018;\n PBJelly v. 15.8.24; BBMAP-CallVariants v.\n 38.12; ABySS Sealer v. 2.1.0\nAssembly Name :: CamDro3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: Illumina HiSeq; Dovetail Hi-C and\n Chicago; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus dromedarius Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 41725625
topology: linear
so has quality: SO_0000987
location: 1..41725625
location: region:1-41725625:1
RO_0002162: 9838

NC_044535
type: RefSeq
SIO_000068: refseq

PRJNA565028
type: BioProject
SIO_000068: bioproject

SAMN03252735
type: BioSample
SIO_000068: biosample

1
title: Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary
author: Elbers, J.P.
author: Rogers, M.F.
author: Perelman, P.L.
author: Proskuryakova, A.A.
author: Serdyukova, N.A.
author: Johnson, W.E.
author: Horin, P.
author: Corander, J.
author: Murphy, D.
author: Burger, P.A.
journal: Mol Ecol Resour
volume: 19
issue: 4
pages: 1015-1026
year: 2019
pubmed: 30972949

30972949
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41725625:1
position: 41725625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-41725625:1:source
so part of: sequence
organism: Camelus dromedarius
mol type: genomic DNA
isolate: Drom800
isolation source: isolated from an animal called Varis
chromosome: 25
sex: female
tissue type: blood
dev stage: adult
country: Austria: Eithental
collection date: 13-Jan-2013
collected by: Pamela Burger
breed: African

9838
type: Taxonomy
SIO_000068: taxonomy

LOC116148883
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148883
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(372855..374349)
location: region:372855-374349:-1
so has part: feature:372855-374349:-1:exon
subclass of: SO_0000011

116148883
type: Gene
SIO_000068: ncbigene

position:372855:-1
position: 372855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374349:-1
position: 374349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:372855-374349:-1:exon

LOC116148883
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148883
product: uncharacterized LOC116148883
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004132447.1
SIO_010081: LOC116148883
subclass of: SO_0000673
so part of: LOC116148883
location: complement(join(372855..373668,373755..373832,374310..374349))
location: region:372855-374349:-1
so has part: feature:374310-374349:-1:exon
so has part: feature:373755-373832:-1:exon
so has part: feature:372855-373668:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:374310-374349:-1:exon

position:374310:-1
position: 374310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:373755-373832:-1:exon

position:373755:-1
position: 373755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373832:-1
position: 373832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:372855-373668:-1:exon

position:373668:-1
position: 373668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148884
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 453450..458187
location: region:453450-458187:1
so has part: feature:453450-458187:1:exon
subclass of: SO_0000011

116148884
type: Gene
SIO_000068: ncbigene

position:453450:1
position: 453450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458187:1
position: 458187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453450-458187:1:exon

LOC116148884
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148884
product: uncharacterized LOC116148884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004132453.1
SIO_010081: LOC116148884
subclass of: SO_0000673
so part of: LOC116148884
location: join(453450..453645,454128..454202,454280..454385,456005..456074,458099..458187)
location: region:453450-458187:1
so has part: feature:453450-453645:1:exon
so has part: feature:454128-454202:1:exon
so has part: feature:454280-454385:1:exon
so has part: feature:456005-456074:1:exon
so has part: feature:458099-458187:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453450-453645:1:exon

position:453645:1
position: 453645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454128-454202:1:exon

position:454128:1
position: 454128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454202:1
position: 454202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:454280-454385:1:exon

position:454280:1
position: 454280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454385:1
position: 454385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:456005-456074:1:exon

position:456005:1
position: 456005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456074:1
position: 456074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:458099-458187:1:exon

position:458099:1
position: 458099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148875
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 460241..462890
location: region:460241-462890:1
so has part: feature:460241-462890:1:exon
subclass of: SO_0000010

116148875
type: Gene
SIO_000068: ncbigene

position:460241:1
position: 460241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462890:1
position: 462890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460241-462890:1:exon

LOC116148875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC116148875
product: cTAGE family member 15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031439278.1
SIO_010081: LOC116148875
subclass of: SO_0000673
so part of: LOC116148875
location: join(460241..460391,460504..460539,460615..460703,460821..460915,462095..462165,462529..462795,462873..462890)
location: region:460241-462890:1
so has part: feature:460241-460391:1:exon
so has part: feature:460504-460539:1:exon
so has part: feature:460615-460703:1:exon
so has part: feature:460821-460915:1:exon
so has part: feature:462095-462165:1:exon
so has part: feature:462529-462795:1:exon
so has part: feature:462873-462890:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:460241-460391:1:exon

position:460391:1
position: 460391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460504-460539:1:exon

position:460504:1
position: 460504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460539:1
position: 460539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:460615-460703:1:exon

position:460615:1
position: 460615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460703:1
position: 460703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:460821-460915:1:exon

position:460821:1
position: 460821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460915:1
position: 460915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:462095-462165:1:exon

position:462095:1
position: 462095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462165:1
position: 462165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:462529-462795:1:exon

position:462529:1
position: 462529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:462795:1
position: 462795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:462873-462890:1:exon

position:462873:1
position: 462873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC116148875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cTAGE family member 15-like
translation: MDWGRLFNSIPSIVSSLMEQFVTHRIRLEECHGQMREAEIIWRHQVTLAEKKAQDSSLRAQELEREISELRRENSELRREVAHLKQRLDAICRRRQAEEYMRQEPTPGGPHRLHPPLRASGPGGSPVRNGTAFPAQEAEETQGTLHAGGPQPFRGPARVAFPVSGPSSSSGPPAPGPPLCPVQPCPPPAAALLSKRKAYSSVSSLSRCRRADRSPGLPRARVALTGLTAVSKERAL
SIO_010081: LOC116148875
subclass of: SO_0000673
so part of: LOC116148875
location: join(460257..460391,460504..460539,460615..460703,460821..460915,462095..462165,462529..462795,462873..462890)
location: region:460257-462890:1
so has part: feature:460257-460391:1:exon
so has part: feature:460504-460539:1:exon
so has part: feature:460615-460703:1:exon
so has part: feature:460821-460915:1:exon
so has part: feature:462095-462165:1:exon
so has part: feature:462529-462795:1:exon
so has part: feature:462873-462890:1:exon

XP_031295138.1
type: Protein
SIO_000068: ncbiprotein

position:460257:1
position: 460257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460257-460391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460504-460539:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:460615-460703:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:460821-460915:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:462095-462165:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:462529-462795:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:462873-462890:1:exon

LOC105103238
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105103238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 462897..480201
location: region:462897-480201:1
so has part: feature:462897-480201:1:exon
subclass of: SO_0000010

105103238
type: Gene
SIO_000068: ncbigene

position:462897:1
position: 462897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480201:1
position: 480201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462897-480201:1:exon

LOC105103238
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105103238
product: formin-like protein 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132449.1
SIO_010081: LOC105103238
so part of: LOC105103238
location: join(462897..463173,463609..463670,464544..464712,464967..465040,466607..466781,468356..470365,471887..472000,472285..472414,475111..475285,478908..479118,479260..479436,480019..480187)
location: region:462897-480187:1
so has part: feature:462897-463173:1:exon
so has part: feature:463609-463670:1:exon
so has part: feature:464544-464712:1:exon
so has part: feature:464967-465040:1:exon
so has part: feature:466607-466781:1:exon
so has part: feature:468356-470365:1:exon
so has part: feature:471887-472000:1:exon
so has part: feature:472285-472414:1:exon
so has part: feature:475111-475285:1:exon
so has part: feature:478908-479118:1:exon
so has part: feature:479260-479436:1:exon
so has part: feature:480019-480187:1:exon

position:480187:1
position: 480187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462897-463173:1:exon

position:463173:1
position: 463173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:463609-463670:1:exon

position:463609:1
position: 463609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:463670:1
position: 463670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464544-464712:1:exon

position:464544:1
position: 464544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464712:1
position: 464712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:464967-465040:1:exon

position:464967:1
position: 464967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:465040:1
position: 465040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:466607-466781:1:exon

position:466607:1
position: 466607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:466781:1
position: 466781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:468356-470365:1:exon

position:468356:1
position: 468356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470365:1
position: 470365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:471887-472000:1:exon

position:471887:1
position: 471887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472000:1
position: 472000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:472285-472414:1:exon

position:472285:1
position: 472285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472414:1
position: 472414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:475111-475285:1:exon

position:475111:1
position: 475111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:475285:1
position: 475285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:478908-479118:1:exon

position:478908:1
position: 478908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479118:1
position: 479118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:479260-479436:1:exon

position:479260:1
position: 479260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:479436:1
position: 479436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:480019-480187:1:exon

position:480019:1
position: 480019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105103238
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105103238
product: formin-like protein 5, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132450.1
SIO_010081: LOC105103238
so part of: LOC105103238
location: join(462897..463173,463609..463670,464544..464712,464967..465040,466607..466781,468356..470365,471887..472000,472285..472414,475111..475285,478128..478360)
location: region:462897-478360:1
so has part: feature:462897-463173:1:exon
so has part: feature:463609-463670:1:exon
so has part: feature:464544-464712:1:exon
so has part: feature:464967-465040:1:exon
so has part: feature:466607-466781:1:exon
so has part: feature:468356-470365:1:exon
so has part: feature:471887-472000:1:exon
so has part: feature:472285-472414:1:exon
so has part: feature:475111-475285:1:exon
so has part: feature:478128-478360:1:exon

position:478360:1
position: 478360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462897-463173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463609-463670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464544-464712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464967-465040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466607-466781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468356-470365:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471887-472000:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472285-472414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475111-475285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:478128-478360:1:exon

position:478128:1
position: 478128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105103238
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105103238
product: formin-like protein 5, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132451.1
SIO_010081: LOC105103238
so part of: LOC105103238
location: join(462897..463173,463609..463670,464544..464712,464967..465040,466607..466781,468356..470365,471887..472000,472285..472414,475111..475285,475425..475475)
location: region:462897-475475:1
so has part: feature:462897-463173:1:exon
so has part: feature:463609-463670:1:exon
so has part: feature:464544-464712:1:exon
so has part: feature:464967-465040:1:exon
so has part: feature:466607-466781:1:exon
so has part: feature:468356-470365:1:exon
so has part: feature:471887-472000:1:exon
so has part: feature:472285-472414:1:exon
so has part: feature:475111-475285:1:exon
so has part: feature:475425-475475:1:exon

position:475475:1
position: 475475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462897-463173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463609-463670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464544-464712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464967-465040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466607-466781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468356-470365:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:471887-472000:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:472285-472414:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:475111-475285:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:475425-475475:1:exon

position:475425:1
position: 475425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105103238
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105103238
product: formin-like protein 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132448.1
SIO_010081: LOC105103238
so part of: LOC105103238
location: join(462897..463173,463609..463670,464544..464712,464967..465040,466607..466781,471887..472000,472285..472414,475111..475233)
location: region:462897-475233:1
so has part: feature:462897-463173:1:exon
so has part: feature:463609-463670:1:exon
so has part: feature:464544-464712:1:exon
so has part: feature:464967-465040:1:exon
so has part: feature:466607-466781:1:exon
so has part: feature:471887-472000:1:exon
so has part: feature:472285-472414:1:exon
so has part: feature:475111-475233:1:exon

position:475233:1
position: 475233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462897-463173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463609-463670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464544-464712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464967-465040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466607-466781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:471887-472000:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:472285-472414:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:475111-475233:1:exon

LOC105103238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105103238
product: formin-like protein 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031439289.1
SIO_010081: LOC105103238
subclass of: SO_0000673
so part of: LOC105103238
location: join(462897..463173,463609..463670,464544..464712,464967..465040,466607..466781,472285..472414,475111..475233)
location: region:462897-475233:1
so has part: feature:462897-463173:1:exon
so has part: feature:463609-463670:1:exon
so has part: feature:464544-464712:1:exon
so has part: feature:464967-465040:1:exon
so has part: feature:466607-466781:1:exon
so has part: feature:472285-472414:1:exon
so has part: feature:475111-475233:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:462897-463173:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:463609-463670:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464544-464712:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:464967-465040:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:466607-466781:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:472285-472414:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:475111-475233:1:exon

LOC105103238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105103238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: formin-like protein 5 isoform X1
translation: MSVCHFGEQKGKGSSSDKEEGATEPEIKNPECKKKNKKRKKKPEYVTGTVEVAPEELTDHNTRTSVGGANRAYTLADAGPGAAPVWPGSARPPAADPEAQVTVDSRDPGTSPGPPGVPHRMGRPASLLRGYSPPPPPPPLWPLRSQPPPPPLPLVTALENMTIRQVKWLRGDTHTGVHHEPPGSWLMMEVDT
SIO_010081: LOC105103238
subclass of: SO_0000673
so part of: LOC105103238
location: join(463614..463670,464544..464712,464967..465040,466607..466781,472285..472388)
location: region:463614-472388:1
so has part: feature:463614-463670:1:exon
so has part: feature:464544-464712:1:exon
so has part: feature:464967-465040:1:exon
so has part: feature:466607-466781:1:exon
so has part: feature:472285-472388:1:exon

XP_031295149.1
type: Protein
SIO_000068: ncbiprotein

position:463614:1
position: 463614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472388:1
position: 472388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463614-463670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:464544-464712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464967-465040:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:466607-466781:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:472285-472388:1:exon

LOC105103238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105103238
product: formin-like protein 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031439290.1
SIO_010081: LOC105103238
subclass of: SO_0000673
so part of: LOC105103238
location: join(466795..470365,471887..472000,472285..472414,475111..475285,478908..479039,479260..479493,480019..480201)
location: region:466795-480201:1
so has part: feature:466795-470365:1:exon
so has part: feature:471887-472000:1:exon
so has part: feature:472285-472414:1:exon
so has part: feature:475111-475285:1:exon
so has part: feature:478908-479039:1:exon
so has part: feature:479260-479493:1:exon
so has part: feature:480019-480201:1:exon

position:466795:1
position: 466795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:466795-470365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:471887-472000:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:472285-472414:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:475111-475285:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478908-479039:1:exon

position:479039:1
position: 479039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:479260-479493:1:exon

position:479493:1
position: 479493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:480019-480201:1:exon

LOC105103238
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105103238
product: formin-like protein 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031439291.1
SIO_010081: LOC105103238
subclass of: SO_0000673
so part of: LOC105103238
location: join(471483..472000,472285..472414,475111..475285,478908..479039,479260..479493,480019..480201)
location: region:471483-480201:1
so has part: feature:471483-472000:1:exon
so has part: feature:472285-472414:1:exon
so has part: feature:475111-475285:1:exon
so has part: feature:478908-479039:1:exon
so has part: feature:479260-479493:1:exon
so has part: feature:480019-480201:1:exon

position:471483:1
position: 471483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:471483-472000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:472285-472414:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475111-475285:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478908-479039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:479260-479493:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:480019-480201:1:exon

LOC105103238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105103238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105103238 isoform X2
translation: MPALMVTAVPFPPDAVPGTALVPGASSRPESEIDSRRQASHNPEILYVELWVLPVLFSLEGELMTALHRWFGVLLVVSAVPGCGVLIFIIGPPSYQCLTMLLIVAMSFQLRIRNNRGRGFRGPSRECFLRPGAREARARSRRVLNSARASGGRFKAGAGAESLIQTSAGGGPHHRDGISASGFQEAKAP
SIO_010081: LOC105103238
subclass of: SO_0000673
so part of: LOC105103238
location: join(475246..475285,478908..479039,479260..479493,480019..480182)
location: region:475246-480182:1
so has part: feature:475246-475285:1:exon
so has part: feature:478908-479039:1:exon
so has part: feature:479260-479493:1:exon
so has part: feature:480019-480182:1:exon

XP_031295150.1
type: Protein
SIO_000068: ncbiprotein

position:475246:1
position: 475246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480182:1
position: 480182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:475246-475285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478908-479039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479260-479493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480019-480182:1:exon

LOC105103238
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105103238
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC105103238 isoform X2
translation: MPALMVTAVPFPPDAVPGTALVPGASSRPESEIDSRRQASHNPEILYVELWVLPVLFSLEGELMTALHRWFGVLLVVSAVPGCGVLIFIIGPPSYQCLTMLLIVAMSFQLRIRNNRGRGFRGPSRECFLRPGAREARARSRRVLNSARASGGRFKAGAGAESLIQTSAGGGPHHRDGISASGFQEAKAP
SIO_010081: LOC105103238
subclass of: SO_0000673
so part of: LOC105103238
location: join(475246..475285,478908..479039,479260..479493,480019..480182)
location: region:475246-480182:1
so has part: feature:475246-475285:1:exon
so has part: feature:478908-479039:1:exon
so has part: feature:479260-479493:1:exon
so has part: feature:480019-480182:1:exon

XP_031295151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:475246-475285:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:478908-479039:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:479260-479493:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480019-480182:1:exon

LOC105101453
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105101453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 550071..614237
location: region:550071-614237:1
so has part: feature:550071-614237:1:exon
subclass of: SO_0000010

105101453
type: Gene
SIO_000068: ncbigene

position:550071:1
position: 550071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:614237:1
position: 614237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550071-614237:1:exon

LOC105101453
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105101453
product: putative serine protease 47
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 69% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031439279.1
SIO_010081: LOC105101453
subclass of: SO_0000673
so part of: LOC105101453
location: join(550071..550198,550707..550899,553000..553191,611646..611916,613920..614237)
location: region:550071-614237:1
so has part: feature:550071-550198:1:exon
so has part: feature:550707-550899:1:exon
so has part: feature:553000-553191:1:exon
so has part: feature:611646-611916:1:exon
so has part: feature:613920-614237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:550071-550198:1:exon

position:550198:1
position: 550198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:550707-550899:1:exon

position:550707:1
position: 550707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:550899:1
position: 550899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:553000-553191:1:exon

position:553000:1
position: 553000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:553191:1
position: 553191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:611646-611916:1:exon

position:611646:1
position: 611646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611916:1
position: 611916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:613920-614237:1:exon

position:613920:1
position: 613920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105101453
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105101453
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative serine protease 47
translation: MRGTPGRASPLWSSRGGAGMETWTSEPAQSSGSWARAWFSWTSYPRRNAAWGLGCHFLSPLLPSLVRNPSPSFPLWSSRGGAGMQAWTSEPAQSSGSWARARCSWTSYPRRNAAWGLGRHFLSPLLPSLVRKSQFLENYRVLLGNTQLYQHTRHTQKIPVSQIIVYPDFDKFHPFGNDIAMLQLLFPVNFTSYIIPACLPAPCMQLPSNSSCWITGWGMGEGDSRGPLVCDLTNAWVLVGLASWGLDCQHPIYRSIFTNVSYFIDWMDEIQRLTPLPDAMSVPPQTQFPHQPLQAAGSPGPGTGFVPPQPWPLLLFLLQAPRQALW
SIO_010081: LOC105101453
subclass of: SO_0000673
so part of: LOC105101453
location: join(550192..550198,550707..550899,553000..553191,611646..611916,613920..614237)
location: region:550192-614237:1
so has part: feature:550192-550198:1:exon
so has part: feature:550707-550899:1:exon
so has part: feature:553000-553191:1:exon
so has part: feature:611646-611916:1:exon
so has part: feature:613920-614237:1:exon

XP_031295139.1
type: Protein
SIO_000068: ncbiprotein

position:550192:1
position: 550192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550192-550198:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:550707-550899:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:553000-553191:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611646-611916:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:613920-614237:1:exon

LOC116148886
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148886
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 679824..755733
location: region:679824-755733:1
so has part: feature:679824-755733:1:exon
subclass of: SO_0000011

116148886
type: Gene
SIO_000068: ncbigene

position:679824:1
position: 679824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:755733:1
position: 755733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679824-755733:1:exon

LOC116148886
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148886
product: uncharacterized LOC116148886, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132457.1
SIO_010081: LOC116148886
subclass of: SO_0000673
so part of: LOC116148886
location: join(679824..679860,703560..703566,755705..755733)
location: region:679824-755733:1
so has part: feature:679824-679860:1:exon
so has part: feature:703560-703566:1:exon
so has part: feature:755705-755733:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:679824-679860:1:exon

position:679860:1
position: 679860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:703560-703566:1:exon

position:703560:1
position: 703560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703566:1
position: 703566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:755705-755733:1:exon

position:755705:1
position: 755705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148886
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148886
product: uncharacterized LOC116148886, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004132456.1
SIO_010081: LOC116148886
subclass of: SO_0000673
so part of: LOC116148886
location: join(679824..679860,703560..703566,731127..731439)
location: region:679824-731439:1
so has part: feature:679824-679860:1:exon
so has part: feature:703560-703566:1:exon
so has part: feature:731127-731439:1:exon

position:731439:1
position: 731439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:679824-679860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:703560-703566:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:731127-731439:1:exon

position:731127:1
position: 731127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105090272
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105090272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 757855..798641
location: region:757855-798641:1
so has part: feature:757855-798641:1:exon
subclass of: SO_0000010

105090272
type: Gene
SIO_000068: ncbigene

position:757855:1
position: 757855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798641:1
position: 798641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757855-798641:1:exon

LOC105090272
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105090272
product: anoctamin-6-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132452.1
SIO_010081: LOC105090272
so part of: LOC105090272
location: join(757855..758054,758802..759089,761662..761773,798355..798641)
location: region:757855-798641:1
so has part: feature:757855-758054:1:exon
so has part: feature:758802-759089:1:exon
so has part: feature:761662-761773:1:exon
so has part: feature:798355-798641:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:757855-758054:1:exon

position:758054:1
position: 758054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:758802-759089:1:exon

position:758802:1
position: 758802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:759089:1
position: 759089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:761662-761773:1:exon

position:761662:1
position: 761662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761773:1
position: 761773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:798355-798641:1:exon

position:798355:1
position: 798355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105090272
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105090272
product: anoctamin-6-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031439292.1
SIO_010081: LOC105090272
subclass of: SO_0000673
so part of: LOC105090272
location: join(757855..758054,758802..759089,761662..762757)
location: region:757855-762757:1
so has part: feature:757855-758054:1:exon
so has part: feature:758802-759089:1:exon
so has part: feature:761662-762757:1:exon

position:762757:1
position: 762757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757855-758054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758802-759089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761662-762757:1:exon

LOC105090272
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105090272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anoctamin-6-like
translation: MAGSLHVTQNAGIASEICHPSHAFTVGWEGSQSESALWNVLDDKLVFAKVHTLWEVLCTYAEILHIKLPLKPSDLETWLSAFDNFGCYMEVLQVDESIIKPEQEFFIALFEKSCVNDFYIQDRDTFFNPAIGSCICNFSLRQRTSAAPANTAFCTGNGLLEA
SIO_010081: LOC105090272
subclass of: SO_0000673
so part of: LOC105090272
location: join(757938..758054,758802..759089,761662..761745)
location: region:757938-761745:1
so has part: feature:757938-758054:1:exon
so has part: feature:758802-759089:1:exon
so has part: feature:761662-761745:1:exon

XP_031295152.1
type: Protein
SIO_000068: ncbiprotein

position:757938:1
position: 757938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:761745:1
position: 761745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757938-758054:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:758802-759089:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:761662-761745:1:exon

TRNAF-AAA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAF-AAA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 798155..798226
location: region:798155-798226:1
so has part: feature:798155-798226:1:exon
subclass of: SO_0000663

116149058
type: Gene
SIO_000068: ncbigene

position:798155:1
position: 798155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:798226:1
position: 798226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:798155-798226:1:exon

TRNAF-AAA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAF-AAA
product: tRNA-Phe
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA phenylalanine (anticodon AAA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:798187..798189,aa:Phe,seq:aaa)
SIO_010081: TRNAF-AAA
subclass of: SO_0000673
so part of: TRNAF-AAA
location: 798155..798226
location: region:798155-798226:1
so has part: feature:798155-798226:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:798155-798226:1:exon

LOC116148885
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 943931..945334
location: region:943931-945334:1
so has part: feature:943931-945334:1:exon
subclass of: SO_0000011

116148885
type: Gene
SIO_000068: ncbigene

position:943931:1
position: 943931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:945334:1
position: 945334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943931-945334:1:exon

LOC116148885
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148885
product: uncharacterized LOC116148885, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132455.1
SIO_010081: LOC116148885
subclass of: SO_0000673
so part of: LOC116148885
location: join(943931..944675,945195..945334)
location: region:943931-945334:1
so has part: feature:943931-944675:1:exon
so has part: feature:945195-945334:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:943931-944675:1:exon

position:944675:1
position: 944675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945195-945334:1:exon

position:945195:1
position: 945195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148885
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148885
product: uncharacterized LOC116148885, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004132454.1
SIO_010081: LOC116148885
subclass of: SO_0000673
so part of: LOC116148885
location: join(943933..944704,945195..945334)
location: region:943933-945334:1
so has part: feature:943933-944704:1:exon
so has part: feature:945195-945334:1:exon

position:943933:1
position: 943933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:943933-944704:1:exon

position:944704:1
position: 944704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:945195-945334:1:exon

LOC116149019
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149019
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(970697..972862)
location: region:970697-972862:-1
so has part: feature:970697-972862:-1:exon
subclass of: SO_0000011

116149019
type: Gene
SIO_000068: ncbigene

position:970697:-1
position: 970697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972862:-1
position: 972862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:970697-972862:-1:exon

LOC116149019
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149019
product: uncharacterized LOC116149019
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_004132659.1
SIO_010081: LOC116149019
subclass of: SO_0000673
so part of: LOC116149019
location: complement(join(970697..970912,971005..971074,972809..972862))
location: region:970697-972862:-1
so has part: feature:972809-972862:-1:exon
so has part: feature:971005-971074:-1:exon
so has part: feature:970697-970912:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:972809-972862:-1:exon

position:972809:-1
position: 972809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:971005-971074:-1:exon

position:971005:-1
position: 971005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971074:-1
position: 971074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:970697-970912:-1:exon

position:970912:-1
position: 970912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148887
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148887
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1007560..1010748
location: region:1007560-1010748:1
so has part: feature:1007560-1010748:1:exon

116148887
type: Gene
SIO_000068: ncbigene

position:1007560:1
position: 1007560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010748:1
position: 1010748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1007560-1010748:1:exon

LOC116148887
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116148887
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116148887
subclass of: SO_0000673
so part of: LOC116148887
location: 1007560..1010748
location: region:1007560-1010748:1
so has part: feature:1007560-1010748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1007560-1010748:1:exon

LOC105103259
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105103259
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1013853..1064077)
location: region:1013853-1064077:-1
so has part: feature:1013853-1064077:-1:exon
subclass of: SO_0000011

105103259
type: Gene
SIO_000068: ncbigene

position:1013853:-1
position: 1013853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064077:-1
position: 1064077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1013853-1064077:-1:exon

LOC105103259
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105103259
product: uncharacterized LOC105103259
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132458.1
SIO_010081: LOC105103259
subclass of: SO_0000673
so part of: LOC105103259
location: complement(join(1013853..1014742,1015260..1015336,1017116..1017209,1019385..1019482,1023102..1023172,1023542..1024474,1034489..1034615,1037390..1037509,1057846..1058018,1063947..1064077))
location: region:1013853-1064077:-1
so has part: feature:1063947-1064077:-1:exon
so has part: feature:1057846-1058018:-1:exon
so has part: feature:1037390-1037509:-1:exon
so has part: feature:1034489-1034615:-1:exon
so has part: feature:1023542-1024474:-1:exon
so has part: feature:1023102-1023172:-1:exon
so has part: feature:1019385-1019482:-1:exon
so has part: feature:1017116-1017209:-1:exon
so has part: feature:1015260-1015336:-1:exon
so has part: feature:1013853-1014742:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063947-1064077:-1:exon

position:1063947:-1
position: 1063947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057846-1058018:-1:exon

position:1057846:-1
position: 1057846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1058018:-1
position: 1058018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1037390-1037509:-1:exon

position:1037390:-1
position: 1037390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1037509:-1
position: 1037509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1034489-1034615:-1:exon

position:1034489:-1
position: 1034489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034615:-1
position: 1034615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1023542-1024474:-1:exon

position:1023542:-1
position: 1023542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1024474:-1
position: 1024474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1023102-1023172:-1:exon

position:1023102:-1
position: 1023102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023172:-1
position: 1023172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1019385-1019482:-1:exon

position:1019385:-1
position: 1019385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019482:-1
position: 1019482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1017116-1017209:-1:exon

position:1017116:-1
position: 1017116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017209:-1
position: 1017209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1015260-1015336:-1:exon

position:1015260:-1
position: 1015260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015336:-1
position: 1015336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1013853-1014742:-1:exon

position:1014742:-1
position: 1014742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148888
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148888
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1146008..1211981)
location: region:1146008-1211981:-1
so has part: feature:1146008-1211981:-1:exon
subclass of: SO_0000011

116148888
type: Gene
SIO_000068: ncbigene

position:1146008:-1
position: 1146008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211981:-1
position: 1211981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1146008-1211981:-1:exon

LOC116148888
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148888
product: uncharacterized LOC116148888, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004132459.1
SIO_010081: LOC116148888
subclass of: SO_0000673
so part of: LOC116148888
location: complement(join(1146008..1146830,1151685..1151736,1211668..1211981))
location: region:1146008-1211981:-1
so has part: feature:1211668-1211981:-1:exon
so has part: feature:1151685-1151736:-1:exon
so has part: feature:1146008-1146830:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211668-1211981:-1:exon

position:1211668:-1
position: 1211668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1151685-1151736:-1:exon

position:1151685:-1
position: 1151685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1151736:-1
position: 1151736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1146008-1146830:-1:exon

position:1146830:-1
position: 1146830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148888
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148888
product: uncharacterized LOC116148888, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132460.1
SIO_010081: LOC116148888
subclass of: SO_0000673
so part of: LOC116148888
location: complement(join(1146008..1149120,1151685..1151736,1211668..1211981))
location: region:1146008-1211981:-1
so has part: feature:1211668-1211981:-1:exon
so has part: feature:1151685-1151736:-1:exon
so has part: feature:1146008-1149120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1211668-1211981:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1151685-1151736:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1146008-1149120:-1:exon

position:1149120:-1
position: 1149120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116149052
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149052
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1251236..1251365
location: region:1251236-1251365:1
so has part: feature:1251236-1251365:1:exon
subclass of: SO_0000578

116149052
type: Gene
SIO_000068: ncbigene

position:1251236:1
position: 1251236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1251365:1
position: 1251365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1251236-1251365:1:exon

LOC116149052
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116149052
product: small nucleolar RNA SNORA18
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00425
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132689.1
SIO_010081: LOC116149052
subclass of: SO_0000673
so part of: LOC116149052
location: 1251236..1251365
location: region:1251236-1251365:1
so has part: feature:1251236-1251365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1251236-1251365:1:exon

TMEM64
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TMEM64
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1295903..1321957)
location: region:1295903-1321957:-1
so has part: feature:1295903-1321957:-1:exon
subclass of: SO_0000010

105095433
type: Gene
SIO_000068: ncbigene

position:1295903:-1
position: 1295903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321957:-1
position: 1321957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1295903-1321957:-1:exon

TMEM64
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM64
product: transmembrane protein 64
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031439281.1
SIO_010081: TMEM64
subclass of: SO_0000673
so part of: TMEM64
location: complement(join(1295903..1299783,1304945..1305100,1321112..1321567,1321784..1321957))
location: region:1295903-1321957:-1
so has part: feature:1321784-1321957:-1:exon
so has part: feature:1321112-1321567:-1:exon
so has part: feature:1304945-1305100:-1:exon
so has part: feature:1295903-1299783:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1321784-1321957:-1:exon

position:1321784:-1
position: 1321784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1321112-1321567:-1:exon

position:1321112:-1
position: 1321112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321567:-1
position: 1321567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1304945-1305100:-1:exon

position:1304945:-1
position: 1304945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305100:-1
position: 1305100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1295903-1299783:-1:exon

position:1299783:-1
position: 1299783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM64
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM64
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transmembrane protein 64
translation: MWSPGRSLLQTPPRLPQHAAVPGRAELPPRXGPPRAAGGDGPADRLPXGGGPRQHLWCRSLVLVCVLAALSFASLALALLSFPPLLLWVESLDSLLGVLLFVVGFIVVSFPCGWGYIVLNVAAGYLYGFVLGMGLMVVGVLIGTFIAHVVCKRLLTAWVATKIQSSEKLSAVIRVVEGGSGLKVVALARLTPIPFGLQNAVFSVTDLSLPNYLMASSIGLLPTQLLNSYLGTTLRTMEDVIAEQSVSGYFVFCLQIIISIGLMFYVVHRAQVELNAAIVACEMELKTSLVKGNQPNISGSSFYSKRTLTFSGGGLNVV
SIO_010081: TMEM64
subclass of: SO_0000673
so part of: TMEM64
location: complement(join(1299592..1299783,1304945..1305100,1321112..1321567,1321784..1321933))
location: region:1299592-1321933:-1
so has part: feature:1321784-1321933:-1:exon
so has part: feature:1321112-1321567:-1:exon
so has part: feature:1304945-1305100:-1:exon
so has part: feature:1299592-1299783:-1:exon

XP_031295141.1
type: Protein
SIO_000068: ncbiprotein

position:1299592:-1
position: 1299592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1321933:-1
position: 1321933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1321784-1321933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1321112-1321567:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1304945-1305100:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1299592-1299783:-1:exon

NECAB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NECAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1435673..1709979
location: region:1435673-1709979:1
so has part: feature:1435673-1709979:1:exon
subclass of: SO_0000010

105085723
type: Gene
SIO_000068: ncbigene

position:1435673:1
position: 1435673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1709979:1
position: 1709979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435673-1709979:1:exon

NECAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NECAB1
product: N-terminal EF-hand calcium binding protein 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031439294.1
SIO_010081: NECAB1
subclass of: SO_0000673
so part of: NECAB1
location: join(1435673..1435945,1447629..1447653,1489996..1490104,1541259..1541284,1554439..1554536,1606557..1606693,1617188..1617309,1626178..1626254,1677443..1677493,1685171..1685283,1692997..1693074,1694359..1694450,1708432..1709979)
location: region:1435673-1709979:1
so has part: feature:1435673-1435945:1:exon
so has part: feature:1447629-1447653:1:exon
so has part: feature:1489996-1490104:1:exon
so has part: feature:1541259-1541284:1:exon
so has part: feature:1554439-1554536:1:exon
so has part: feature:1606557-1606693:1:exon
so has part: feature:1617188-1617309:1:exon
so has part: feature:1626178-1626254:1:exon
so has part: feature:1677443-1677493:1:exon
so has part: feature:1685171-1685283:1:exon
so has part: feature:1692997-1693074:1:exon
so has part: feature:1694359-1694450:1:exon
so has part: feature:1708432-1709979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1435673-1435945:1:exon

position:1435945:1
position: 1435945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1447629-1447653:1:exon

position:1447629:1
position: 1447629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1447653:1
position: 1447653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1489996-1490104:1:exon

position:1489996:1
position: 1489996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1490104:1
position: 1490104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1541259-1541284:1:exon

position:1541259:1
position: 1541259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1541284:1
position: 1541284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1554439-1554536:1:exon

position:1554439:1
position: 1554439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1554536:1
position: 1554536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1606557-1606693:1:exon

position:1606557:1
position: 1606557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1606693:1
position: 1606693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1617188-1617309:1:exon

position:1617188:1
position: 1617188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1617309:1
position: 1617309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1626178-1626254:1:exon

position:1626178:1
position: 1626178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1626254:1
position: 1626254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1677443-1677493:1:exon

position:1677443:1
position: 1677443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1677493:1
position: 1677493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1685171-1685283:1:exon

position:1685171:1
position: 1685171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1685283:1
position: 1685283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1692997-1693074:1:exon

position:1692997:1
position: 1692997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1693074:1
position: 1693074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1694359-1694450:1:exon

position:1694359:1
position: 1694359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1694450:1
position: 1694450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1708432-1709979:1:exon

position:1708432:1
position: 1708432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NECAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NECAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N-terminal EF-hand calcium-binding protein 1
translation: MEDSRETSPSSNNSSEELSSALRLSKGMSIFLDILRRADKNDDGKLSFEEFKAYFADGILSGEELHELFHTIDTHNTNNLDTEELCEYFSQHLGEYENVLAALEDLNLSILKAMGKTKKDYQEASNLEQFVTRFLLKETLNQLQSLQNSLECAMETTEEQTRQERRGPTKPEVLSIQWPGKRASRRVQRHNSFSPSSPQFNVYGPGLLEEDNQWMTQINRLQKLIDRLEKKDLKLEPLEEVIEGNTKSHIMLVQRQMSVIEEDLEEFQLALKHYVESASSQSGCLRISIQKLSNESRYMIYEFWENSSVWNSHLQTNYSKTFQRSNVDFLETPELTSTMLVPASWWILNN
SIO_010081: NECAB1
subclass of: SO_0000673
so part of: NECAB1
location: join(1435847..1435945,1447629..1447653,1489996..1490104,1541259..1541284,1554439..1554536,1606557..1606693,1617188..1617309,1626178..1626254,1677443..1677493,1685171..1685283,1692997..1693074,1694359..1694450,1708432..1708457)
location: region:1435847-1708457:1
so has part: feature:1435847-1435945:1:exon
so has part: feature:1447629-1447653:1:exon
so has part: feature:1489996-1490104:1:exon
so has part: feature:1541259-1541284:1:exon
so has part: feature:1554439-1554536:1:exon
so has part: feature:1606557-1606693:1:exon
so has part: feature:1617188-1617309:1:exon
so has part: feature:1626178-1626254:1:exon
so has part: feature:1677443-1677493:1:exon
so has part: feature:1685171-1685283:1:exon
so has part: feature:1692997-1693074:1:exon
so has part: feature:1694359-1694450:1:exon
so has part: feature:1708432-1708457:1:exon

XP_031295154.1
type: Protein
SIO_000068: ncbiprotein

position:1435847:1
position: 1435847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1708457:1
position: 1708457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435847-1435945:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1447629-1447653:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1489996-1490104:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1541259-1541284:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1554439-1554536:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1606557-1606693:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1617188-1617309:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1626178-1626254:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1677443-1677493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1685171-1685283:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1692997-1693074:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1694359-1694450:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1708432-1708457:1:exon

LOC105095434
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105095434
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1478516..1482790)
location: region:1478516-1482790:-1
so has part: feature:1478516-1482790:-1:exon

105095434
type: Gene
SIO_000068: ncbigene

position:1478516:-1
position: 1478516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1482790:-1
position: 1482790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478516-1482790:-1:exon

LOC105095434
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105095434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105095434
subclass of: SO_0000673
so part of: LOC105095434
location: complement(1478516..1478527)
location: region:1478516-1478527:-1
so has part: feature:1478516-1478527:-1:exon

position:1478527:-1
position: 1478527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1478516-1478527:-1:exon

LOC105095434
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105095434
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
pseudo: true
SIO_010081: LOC105095434
subclass of: SO_0000673
so part of: LOC105095434
location: complement(1481854..1482790)
location: region:1481854-1482790:-1
so has part: feature:1481854-1482790:-1:exon

position:1481854:-1
position: 1481854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1481854-1482790:-1:exon

C25H8orf88
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: C25H8orf88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1710228..1737677)
location: region:1710228-1737677:-1
so has part: feature:1710228-1737677:-1:exon
subclass of: SO_0000010

105085750
type: Gene
SIO_000068: ncbigene

position:1710228:-1
position: 1710228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1737677:-1
position: 1737677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1710228-1737677:-1:exon

C25H8orf88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf88
product: chromosome 25 C8orf88 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031439296.1
SIO_010081: C25H8orf88
subclass of: SO_0000673
so part of: C25H8orf88
location: complement(join(1710228..1711959,1714069..1714175,1724955..1725024,1733298..1733371,1735928..1737677))
location: region:1710228-1737677:-1
so has part: feature:1735928-1737677:-1:exon
so has part: feature:1733298-1733371:-1:exon
so has part: feature:1724955-1725024:-1:exon
so has part: feature:1714069-1714175:-1:exon
so has part: feature:1710228-1711959:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1735928-1737677:-1:exon

position:1735928:-1
position: 1735928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1733298-1733371:-1:exon

position:1733298:-1
position: 1733298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1733371:-1
position: 1733371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1724955-1725024:-1:exon

position:1724955:-1
position: 1724955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1725024:-1
position: 1725024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1714069-1714175:-1:exon

position:1714069:-1
position: 1714069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1714175:-1
position: 1714175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1710228-1711959:-1:exon

position:1711959:-1
position: 1711959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C25H8orf88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C8orf88 homolog
translation: METKKLIGKPLQPARPVRHLTSTPGAVFPFNFQKEYPCNTQCLQSGVSRYKTNGIQAFSQGLNEQHQSPVKKERIKYSRDFLLKLSNVSICRKKPDFLPDHPIVLQKPENNLSFK
SIO_010081: C25H8orf88
subclass of: SO_0000673
so part of: C25H8orf88
location: complement(join(1711936..1711959,1714069..1714175,1724955..1725024,1733298..1733371,1735928..1736000))
location: region:1711936-1736000:-1
so has part: feature:1735928-1736000:-1:exon
so has part: feature:1733298-1733371:-1:exon
so has part: feature:1724955-1725024:-1:exon
so has part: feature:1714069-1714175:-1:exon
so has part: feature:1711936-1711959:-1:exon

XP_031295156.1
type: Protein
SIO_000068: ncbiprotein

position:1711936:-1
position: 1711936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1736000:-1
position: 1736000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1735928-1736000:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1733298-1733371:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1724955-1725024:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1714069-1714175:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1711936-1711959:-1:exon

PIP4P2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PIP4P2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1757291..1809294)
location: region:1757291-1809294:-1
so has part: feature:1757291-1809294:-1:exon
subclass of: SO_0000010

105085724
type: Gene
SIO_000068: ncbigene

position:1757291:-1
position: 1757291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809294:-1
position: 1809294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1757291-1809294:-1:exon

PIP4P2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PIP4P2
product: phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_010975990.2
SIO_010081: PIP4P2
subclass of: SO_0000673
so part of: PIP4P2
location: complement(join(1757291..1758847,1759524..1759614,1771108..1771160,1779881..1780004,1781081..1781187,1782027..1782175,1809056..1809294))
location: region:1757291-1809294:-1
so has part: feature:1809056-1809294:-1:exon
so has part: feature:1782027-1782175:-1:exon
so has part: feature:1781081-1781187:-1:exon
so has part: feature:1779881-1780004:-1:exon
so has part: feature:1771108-1771160:-1:exon
so has part: feature:1759524-1759614:-1:exon
so has part: feature:1757291-1758847:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809056-1809294:-1:exon

position:1809056:-1
position: 1809056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1782027-1782175:-1:exon

position:1782027:-1
position: 1782027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782175:-1
position: 1782175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1781081-1781187:-1:exon

position:1781081:-1
position: 1781081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781187:-1
position: 1781187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1779881-1780004:-1:exon

position:1779881:-1
position: 1779881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780004:-1
position: 1780004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1771108-1771160:-1:exon

position:1771108:-1
position: 1771108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771160:-1
position: 1771160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1759524-1759614:-1:exon

position:1759524:-1
position: 1759524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759614:-1
position: 1759614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1757291-1758847:-1:exon

position:1758847:-1
position: 1758847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIP4P2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PIP4P2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase
translation: MAADGVDERSPLLSASHSGNVTPTAPPYLEESSPRAELPPPYTAIASPDASGIPVINCRVCQSLINLDGKLHQHVVKCTVCNEATPIKNPPAGKKYVRCPCNCLLICKDTSRRIGCPRPNCRRIINLGPVMLISEEQPAQPALPVQPEGTRVVCGHCGNTFLWMELRFNTLAKCPHCKKISSVGSALPRRRCCAYITIGMMCIFIGVGLTVGTQDFARRFHATYVSWAIAYLLGLICLIRACYWGAIRVSYPEHSFA
SIO_010081: PIP4P2
subclass of: SO_0000673
so part of: PIP4P2
location: complement(join(1758704..1758847,1759524..1759614,1771108..1771160,1779881..1780004,1781081..1781187,1782027..1782175,1809056..1809161))
location: region:1758704-1809161:-1
so has part: feature:1809056-1809161:-1:exon
so has part: feature:1782027-1782175:-1:exon
so has part: feature:1781081-1781187:-1:exon
so has part: feature:1779881-1780004:-1:exon
so has part: feature:1771108-1771160:-1:exon
so has part: feature:1759524-1759614:-1:exon
so has part: feature:1758704-1758847:-1:exon

XP_010974292.1
type: Protein
SIO_000068: ncbiprotein

position:1758704:-1
position: 1758704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809161:-1
position: 1809161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809056-1809161:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1782027-1782175:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1781081-1781187:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1779881-1780004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771108-1771160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1759524-1759614:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1758704-1758847:-1:exon

LOC116148889
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148889
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1845108..1851403)
location: region:1845108-1851403:-1
so has part: feature:1845108-1851403:-1:exon
subclass of: SO_0000011

116148889
type: Gene
SIO_000068: ncbigene

position:1845108:-1
position: 1845108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1851403:-1
position: 1851403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1845108-1851403:-1:exon

LOC116148889
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148889
product: uncharacterized LOC116148889
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004132461.1
SIO_010081: LOC116148889
subclass of: SO_0000673
so part of: LOC116148889
location: complement(join(1845108..1851120,1851233..1851403))
location: region:1845108-1851403:-1
so has part: feature:1851233-1851403:-1:exon
so has part: feature:1845108-1851120:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1851233-1851403:-1:exon

position:1851233:-1
position: 1851233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1845108-1851120:-1:exon

position:1851120:-1
position: 1851120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OTUD6B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: OTUD6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1851654..1867569
location: region:1851654-1867569:1
so has part: feature:1851654-1867569:1:exon
subclass of: SO_0000010

105085725
type: Gene
SIO_000068: ncbigene

position:1851654:1
position: 1851654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1867569:1
position: 1867569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1851654-1867569:1:exon

OTUD6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: OTUD6B
product: OTU deubiquitinase 6B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_010975991.2
SIO_010081: OTUD6B
subclass of: SO_0000673
so part of: OTUD6B
location: join(1851654..1851812,1852437..1852588,1854896..1854976,1860055..1860367,1862005..1862066,1864353..1864459,1865238..1867569)
location: region:1851654-1867569:1
so has part: feature:1851654-1851812:1:exon
so has part: feature:1852437-1852588:1:exon
so has part: feature:1854896-1854976:1:exon
so has part: feature:1860055-1860367:1:exon
so has part: feature:1862005-1862066:1:exon
so has part: feature:1864353-1864459:1:exon
so has part: feature:1865238-1867569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1851654-1851812:1:exon

position:1851812:1
position: 1851812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1852437-1852588:1:exon

position:1852437:1
position: 1852437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1852588:1
position: 1852588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1854896-1854976:1:exon

position:1854896:1
position: 1854896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1854976:1
position: 1854976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1860055-1860367:1:exon

position:1860055:1
position: 1860055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1860367:1
position: 1860367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1862005-1862066:1:exon

position:1862005:1
position: 1862005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1862066:1
position: 1862066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1864353-1864459:1:exon

position:1864353:1
position: 1864353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1864459:1
position: 1864459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1865238-1867569:1:exon

position:1865238:1
position: 1865238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OTUD6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: OTUD6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deubiquitinase OTUD6B isoform X1
translation: MEAVSAEELDEEEQLVRRHRKEKKELQAKIQGMKNAVPKNDKKRRKQLTEDVAKLEAEMEQKHREELEQLKLTSKENKIDSVAGNISNLVLENQPLRISKAQKRRDKKAALEKEREERIAEAEVENLTGARHVESEKLAQILAARQLEIKQIPSDGHCMYRAIEDQLKERDCTLTVAALRSRTADYMHSHVEDFLPFLTNPNTGEVYTPEEFGKYCDDTVNTAAWGGQLELRALSHILRTPIEIIQADSPPIVVGEEYPKKPLILVYMRHAYGLGEHYNSVTRLVHTAAGNCS
SIO_010081: OTUD6B
subclass of: SO_0000673
so part of: OTUD6B
location: join(1851731..1851812,1852437..1852588,1854896..1854976,1860055..1860367,1862005..1862066,1864353..1864459,1865238..1865322)
location: region:1851731-1865322:1
so has part: feature:1851731-1851812:1:exon
so has part: feature:1852437-1852588:1:exon
so has part: feature:1854896-1854976:1:exon
so has part: feature:1860055-1860367:1:exon
so has part: feature:1862005-1862066:1:exon
so has part: feature:1864353-1864459:1:exon
so has part: feature:1865238-1865322:1:exon

XP_010974293.1
type: Protein
SIO_000068: ncbiprotein

position:1851731:1
position: 1851731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1865322:1
position: 1865322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1851731-1851812:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1852437-1852588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1854896-1854976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1860055-1860367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1862005-1862066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1864353-1864459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1865238-1865322:1:exon

OTUD6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: OTUD6B
product: OTU deubiquitinase 6B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031439297.1
SIO_010081: OTUD6B
subclass of: SO_0000673
so part of: OTUD6B
location: join(1852450..1852588,1853991..1854193,1854896..1854976,1860055..1860367,1862005..1862066,1864353..1864459,1865238..1867569)
location: region:1852450-1867569:1
so has part: feature:1852450-1852588:1:exon
so has part: feature:1853991-1854193:1:exon
so has part: feature:1854896-1854976:1:exon
so has part: feature:1860055-1860367:1:exon
so has part: feature:1862005-1862066:1:exon
so has part: feature:1864353-1864459:1:exon
so has part: feature:1865238-1867569:1:exon

position:1852450:1
position: 1852450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1852450-1852588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1853991-1854193:1:exon

position:1853991:1
position: 1853991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1854193:1
position: 1854193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1854896-1854976:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1860055-1860367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1862005-1862066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1864353-1864459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1865238-1867569:1:exon

OTUD6B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: OTUD6B
product: OTU deubiquitinase 6B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_010975992.2
SIO_010081: OTUD6B
subclass of: SO_0000673
so part of: OTUD6B
location: join(1852550..1852588,1854896..1854976,1857646..1857786,1860055..1860367,1862005..1862066,1864353..1864459,1865238..1867569)
location: region:1852550-1867569:1
so has part: feature:1852550-1852588:1:exon
so has part: feature:1854896-1854976:1:exon
so has part: feature:1857646-1857786:1:exon
so has part: feature:1860055-1860367:1:exon
so has part: feature:1862005-1862066:1:exon
so has part: feature:1864353-1864459:1:exon
so has part: feature:1865238-1867569:1:exon

position:1852550:1
position: 1852550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1852550-1852588:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854896-1854976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1857646-1857786:1:exon

position:1857646:1
position: 1857646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1857786:1
position: 1857786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1860055-1860367:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1862005-1862066:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1864353-1864459:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1865238-1867569:1:exon

OTUD6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: OTUD6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deubiquitinase OTUD6B isoform X2
translation: MFHIDSVAGNISNLVLENQPLRISKAQKRRDKKAALEKEREERIAEAEVENLTGARHVESEKLAQILAARQLEIKQIPSDGHCMYRAIEDQLKERDCTLTVAALRSRTADYMHSHVEDFLPFLTNPNTGEVYTPEEFGKYCDDTVNTAAWGGQLELRALSHILRTPIEIIQADSPPIVVGEEYPKKPLILVYMRHAYGLGEHYNSVTRLVHTAAGNCS
SIO_010081: OTUD6B
subclass of: SO_0000673
so part of: OTUD6B
location: join(1854185..1854193,1854896..1854976,1860055..1860367,1862005..1862066,1864353..1864459,1865238..1865322)
location: region:1854185-1865322:1
so has part: feature:1854185-1854193:1:exon
so has part: feature:1854896-1854976:1:exon
so has part: feature:1860055-1860367:1:exon
so has part: feature:1862005-1862066:1:exon
so has part: feature:1864353-1864459:1:exon
so has part: feature:1865238-1865322:1:exon

XP_031295157.1
type: Protein
SIO_000068: ncbiprotein

position:1854185:1
position: 1854185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1854185-1854193:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1854896-1854976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1860055-1860367:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1862005-1862066:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1864353-1864459:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1865238-1865322:1:exon

OTUD6B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: OTUD6B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deubiquitinase OTUD6B isoform X3
translation: MIPKDKKAALEKEREERIAEAEVENLTGARHVESEKLAQILAARQLEIKQIPSDGHCMYRAIEDQLKERDCTLTVAALRSRTADYMHSHVEDFLPFLTNPNTGEVYTPEEFGKYCDDTVNTAAWGGQLELRALSHILRTPIEIIQADSPPIVVGEEYPKKPLILVYMRHAYGLGEHYNSVTRLVHTAAGNCS
SIO_010081: OTUD6B
subclass of: SO_0000673
so part of: OTUD6B
location: join(1857775..1857786,1860055..1860367,1862005..1862066,1864353..1864459,1865238..1865322)
location: region:1857775-1865322:1
so has part: feature:1857775-1857786:1:exon
so has part: feature:1860055-1860367:1:exon
so has part: feature:1862005-1862066:1:exon
so has part: feature:1864353-1864459:1:exon
so has part: feature:1865238-1865322:1:exon

XP_010974294.1
type: Protein
SIO_000068: ncbiprotein

position:1857775:1
position: 1857775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1857775-1857786:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1860055-1860367:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1862005-1862066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1864353-1864459:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1865238-1865322:1:exon

LRRC69
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LRRC69
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1871802..1945378
location: region:1871802-1945378:1
so has part: feature:1871802-1945378:1:exon
subclass of: SO_0000010

105085726
type: Gene
SIO_000068: ncbigene

position:1871802:1
position: 1871802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1945378:1
position: 1945378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1871802-1945378:1:exon

LRRC69
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LRRC69
product: leucine rich repeat containing 69, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010975993.2
SIO_010081: LRRC69
subclass of: SO_0000673
so part of: LRRC69
location: join(1871802..1872293,1885414..1885540,1889994..1890066,1892772..1892967,1895557..1895628,1920031..1920132,1925842..1926021,1945268..1945378)
location: region:1871802-1945378:1
so has part: feature:1871802-1872293:1:exon
so has part: feature:1885414-1885540:1:exon
so has part: feature:1889994-1890066:1:exon
so has part: feature:1892772-1892967:1:exon
so has part: feature:1895557-1895628:1:exon
so has part: feature:1920031-1920132:1:exon
so has part: feature:1925842-1926021:1:exon
so has part: feature:1945268-1945378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1871802-1872293:1:exon

position:1872293:1
position: 1872293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1885414-1885540:1:exon

position:1885414:1
position: 1885414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1885540:1
position: 1885540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1889994-1890066:1:exon

position:1889994:1
position: 1889994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1890066:1
position: 1890066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1892772-1892967:1:exon

position:1892772:1
position: 1892772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1892967:1
position: 1892967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1895557-1895628:1:exon

position:1895557:1
position: 1895557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1895628:1
position: 1895628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1920031-1920132:1:exon

position:1920031:1
position: 1920031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1920132:1
position: 1920132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1925842-1926021:1:exon

position:1925842:1
position: 1925842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1926021:1
position: 1926021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1945268-1945378:1:exon

position:1945268:1
position: 1945268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRC69
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LRRC69
product: leucine rich repeat containing 69, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031439298.1
SIO_010081: LRRC69
subclass of: SO_0000673
so part of: LRRC69
location: join(1871802..1872293,1920031..1920132,1925842..1926021,1945268..1945378)
location: region:1871802-1945378:1
so has part: feature:1871802-1872293:1:exon
so has part: feature:1920031-1920132:1:exon
so has part: feature:1925842-1926021:1:exon
so has part: feature:1945268-1945378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1871802-1872293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920031-1920132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1925842-1926021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1945268-1945378:1:exon

LRRC69
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LRRC69
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 69 isoform X1
translation: MAEKLLIRALQGGKSTKIVTLNGKKMTKMPSVLGNLPGLKTLRLQNNLIPYVCPEISALTQLTALNLGNNLLEEVPEEMKYLTSLKTLHLFGNRIHRFASGACDGLQNLILLNLNNNQLTWIPQEVSRLRSLTYLSVNHNQLASIPRELCFLKNLSELQLNYNQLVCIPEEIKFLKKLQKLLLVRNNIESLPEGLCDLLNLKILDIAGNVIQIFPPGFQNLKLREFYCEGNPLFLKKPVHAVKQEDIWSLQEITSRFIMNQLAEKNHFLTRAIEWYPQVRSMISQGRKCAICGRSFLTIWLECVEFFPPSKNWKISRNLQLVPLRILICSYKCFDQRGPNLFGIAQV
SIO_010081: LRRC69
subclass of: SO_0000673
so part of: LRRC69
location: join(1872111..1872293,1885414..1885540,1889994..1890066,1892772..1892967,1895557..1895628,1920031..1920132,1925842..1926021,1945268..1945378)
location: region:1872111-1945378:1
so has part: feature:1872111-1872293:1:exon
so has part: feature:1885414-1885540:1:exon
so has part: feature:1889994-1890066:1:exon
so has part: feature:1892772-1892967:1:exon
so has part: feature:1895557-1895628:1:exon
so has part: feature:1920031-1920132:1:exon
so has part: feature:1925842-1926021:1:exon
so has part: feature:1945268-1945378:1:exon

XP_010974295.1
type: Protein
SIO_000068: ncbiprotein

position:1872111:1
position: 1872111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1872111-1872293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1885414-1885540:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1889994-1890066:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1892772-1892967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1895557-1895628:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1920031-1920132:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1925842-1926021:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1945268-1945378:1:exon

LRRC69
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LRRC69
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat-containing protein 69 isoform X2
translation: MAEKLLIRALQGGKSTKIVTLNGKKMTKMPSVLGNLPGLKTLRLQNNLIPYVCPEISALTQFQNLKLREFYCEGNPLFLKKPVHAVKQEDIWSLQEITSRFIMNQLAEKNHFLTRAIEWYPQVRSMISQGRKCAICGRSFLTIWLECVEFFPPSKNWKISRNLQLVPLRILICSYKCFDQRGPNLFGIAQV
SIO_010081: LRRC69
subclass of: SO_0000673
so part of: LRRC69
location: join(1872111..1872293,1920031..1920132,1925842..1926021,1945268..1945378)
location: region:1872111-1945378:1
so has part: feature:1872111-1872293:1:exon
so has part: feature:1920031-1920132:1:exon
so has part: feature:1925842-1926021:1:exon
so has part: feature:1945268-1945378:1:exon

XP_031295158.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1872111-1872293:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1920031-1920132:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1925842-1926021:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1945268-1945378:1:exon

SLC26A7
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SLC26A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1981465..2115343
location: region:1981465-2115343:1
so has part: feature:1981465-2115343:1:exon
subclass of: SO_0000010

105085727
type: Gene
SIO_000068: ncbigene

position:1981465:1
position: 1981465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115343:1
position: 2115343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981465-2115343:1:exon

SLC26A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC26A7
product: solute carrier family 26 member 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031439301.1
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981465..1981619,1981764..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2075178..2075255,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2110994..2111048,2111131..2111234,2112294..2115343)
location: region:1981465-2115343:1
so has part: feature:1981465-1981619:1:exon
so has part: feature:1981764-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2075178-2075255:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112294-2115343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981465-1981619:1:exon

position:1981619:1
position: 1981619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1981764-1982072:1:exon

position:1981764:1
position: 1981764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1982072:1
position: 1982072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2015934-2016044:1:exon

position:2015934:1
position: 2015934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2016044:1
position: 2016044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2021983-2022155:1:exon

position:2021983:1
position: 2021983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2022155:1
position: 2022155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2044390-2044554:1:exon

position:2044390:1
position: 2044390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044554:1
position: 2044554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2058192-2058344:1:exon

position:2058192:1
position: 2058192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2058344:1
position: 2058344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2061768-2061850:1:exon

position:2061768:1
position: 2061768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2061850:1
position: 2061850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2065160-2065307:1:exon

position:2065160:1
position: 2065160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2065307:1
position: 2065307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2067327-2067440:1:exon

position:2067327:1
position: 2067327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067440:1
position: 2067440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2075178-2075255:1:exon

position:2075178:1
position: 2075178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075255:1
position: 2075255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2076405-2076500:1:exon

position:2076405:1
position: 2076405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2076500:1
position: 2076500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2080394-2080500:1:exon

position:2080394:1
position: 2080394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2080500:1
position: 2080500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2081500-2081566:1:exon

position:2081500:1
position: 2081500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081566:1
position: 2081566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2084415-2084552:1:exon

position:2084415:1
position: 2084415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2084552:1
position: 2084552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2110994-2111048:1:exon

position:2110994:1
position: 2110994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111048:1
position: 2111048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2111131-2111234:1:exon

position:2111131:1
position: 2111131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111234:1
position: 2111234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2112294-2115343:1:exon

position:2112294:1
position: 2112294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC26A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC26A7
product: solute carrier family 26 member 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031439300.1
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981466..1981619,1981764..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2095956..2096004,2105685..2105785,2110994..2111048,2111131..2111234,2112294..2115343)
location: region:1981466-2115343:1
so has part: feature:1981466-1981619:1:exon
so has part: feature:1981764-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2095956-2096004:1:exon
so has part: feature:2105685-2105785:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112294-2115343:1:exon

position:1981466:1
position: 1981466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981466-1981619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1981764-1982072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2015934-2016044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2021983-2022155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2044390-2044554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2058192-2058344:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2061768-2061850:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2065160-2065307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2067327-2067440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2076405-2076500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2080394-2080500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2081500-2081566:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2084415-2084552:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2095956-2096004:1:exon

position:2095956:1
position: 2095956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096004:1
position: 2096004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2105685-2105785:1:exon

position:2105685:1
position: 2105685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105785:1
position: 2105785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2110994-2111048:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2111131-2111234:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2112294-2115343:1:exon

SLC26A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC26A7
product: solute carrier family 26 member 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010975996.2
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981468..1981619,1981764..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2075178..2075255,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2095956..2096004,2105685..2105785,2110994..2111048,2111131..2111234,2112057..2112094,2112294..2115343)
location: region:1981468-2115343:1
so has part: feature:1981468-1981619:1:exon
so has part: feature:1981764-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2075178-2075255:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2095956-2096004:1:exon
so has part: feature:2105685-2105785:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112057-2112094:1:exon
so has part: feature:2112294-2115343:1:exon

position:1981468:1
position: 1981468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981468-1981619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1981764-1982072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2015934-2016044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2021983-2022155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2044390-2044554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2058192-2058344:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2061768-2061850:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2065160-2065307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2067327-2067440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2075178-2075255:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2076405-2076500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2080394-2080500:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2081500-2081566:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2084415-2084552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2095956-2096004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2105685-2105785:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2110994-2111048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2111131-2111234:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2112057-2112094:1:exon

position:2112057:1
position: 2112057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112094:1
position: 2112094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2112294-2115343:1:exon

SLC26A7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC26A7
product: solute carrier family 26 member 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_010975994.2
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981468..1981619,1981764..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2075178..2075255,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2095956..2096004,2105685..2105785,2110994..2111048,2111131..2111234,2112294..2115343)
location: region:1981468-2115343:1
so has part: feature:1981468-1981619:1:exon
so has part: feature:1981764-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2075178-2075255:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2095956-2096004:1:exon
so has part: feature:2105685-2105785:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112294-2115343:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1981468-1981619:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1981764-1982072:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2015934-2016044:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2021983-2022155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2044390-2044554:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2058192-2058344:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2061768-2061850:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2065160-2065307:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2067327-2067440:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2075178-2075255:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2076405-2076500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2080394-2080500:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2081500-2081566:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2084415-2084552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2095956-2096004:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2105685-2105785:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2110994-2111048:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2111131-2111234:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2112294-2115343:1:exon

SLC26A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC26A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anion exchange transporter isoform X1
translation: MTGAKRKKRSVLWTKMHTPHCEDFKQWCRRRLPILEWATRYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAVFGMGRHVSTGTFALTSLISANAVERLVPLSSQNLTAQSNTSVLGLSDFEMQRISVAAAVSFLGGVIQVAMFVLHLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGMKIPYISGPLGFFYIYAHVFQNIKSVRLEALLLSLLSIVVLVLVKELNEQFKRKIKIVLPVDLVLIIAASFTCYCTNMENTYGLEVVGHIPKGIPPPRVPPMRILSAVITEAFGVAFVGYVASLALAQGSAKKFKYSVDDNQELLAHGLSNVISSFFFCIPSAAAMGRTAGLYSTGARTQVACLISCVSVLMVIYAAGPLLYWLPMCVLASIIVVGLKGMLIQFRDLRKYWNVDKIDWGIWVSTYIFSICFAANVGLLFGVVCTVAIVIGRFPRAKTLSIKNMKEMEFKLKREVDDETVHQVKIIFINNPLVFLNAKKFRADLMNIIQRENTSSQPHDEISKCEQNTLLNSLSNGNCNEEATQPCLNEKCSLILDCSGLTFFDSSGVSMLVEVYTDSNSKSVDVSFAHCTASLIRAMKYCGNLDPEKPIFFESVPAALSSIHSNKSLSKLSDHSEI
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981880..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2075178..2075255,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2095956..2096004,2105685..2105785,2110994..2111048,2111131..2111234,2112294..2112329)
location: region:1981880-2112329:1
so has part: feature:1981880-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2075178-2075255:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2095956-2096004:1:exon
so has part: feature:2105685-2105785:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112294-2112329:1:exon

XP_010974296.2
type: Protein
SIO_000068: ncbiprotein

position:1981880:1
position: 1981880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112329:1
position: 2112329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981880-1982072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2015934-2016044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2021983-2022155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044390-2044554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2058192-2058344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2061768-2061850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2065160-2065307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2067327-2067440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2075178-2075255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2076405-2076500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2080394-2080500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2081500-2081566:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2084415-2084552:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2095956-2096004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2105685-2105785:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2110994-2111048:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2111131-2111234:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2112294-2112329:1:exon

SLC26A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC26A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anion exchange transporter isoform X4
translation: MTGAKRKKRSVLWTKMHTPHCEDFKQWCRRRLPILEWATRYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAVFGMGRHVSTGTFALTSLISANAVERLVPLSSQNLTAQSNTSVLGLSDFEMQRISVAAAVSFLGGVIQVAMFVLHLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGMKIPYISGPLGFFYIYAHVFQNIKSVRLEALLLSLLSIVVLVLVKELNEQFKRKIKIVLPVDLVLIIAASFTCYCTNMENTYGLEVVGHIPKGIPPPRVPPMRILSAVITEAFGVAFVGYVASLALAQGSAKKFKYSVDDNQELLAHGLSNVISSFFFCIPSAAAMGRTAGLYSTGARTQVACLISCVSVLMVIYAAGPLLYWLPMCVLASIIVVGLKGMLIQFRDLRKYWNVDKIDWGIWVSTYIFSICFAANVGLLFGVVCTVAIVIGRFPRAKTLSIKNMKEMEFKLKREVDDETVHQVKIIFINNPLVFLNAKKFRADLMNIIQRENTSSQPHDEISKVYTDSNSKSVDVSFAHCTASLIRAMKYCGNLDPEKPIFFESVPAALSSIHSNKSLSKLSDHSEI
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981880..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2075178..2075255,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2110994..2111048,2111131..2111234,2112294..2112329)
location: region:1981880-2112329:1
so has part: feature:1981880-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2075178-2075255:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112294-2112329:1:exon

XP_031295161.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1981880-1982072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2015934-2016044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2021983-2022155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044390-2044554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2058192-2058344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2061768-2061850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2065160-2065307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2067327-2067440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2075178-2075255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2076405-2076500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2080394-2080500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2081500-2081566:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2084415-2084552:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2110994-2111048:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2111131-2111234:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2112294-2112329:1:exon

SLC26A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC26A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anion exchange transporter isoform X3
translation: MTGAKRKKRSVLWTKMHTPHCEDFKQWCRRRLPILEWATRYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAVFGMGRHVSTGTFALTSLISANAVERLVPLSSQNLTAQSNTSVLGLSDFEMQRISVAAAVSFLGGVIQVAMFVLHLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGMKIPYISGPLGFFYIYAHVFQNIKSVRLEALLLSLLSIVVLVLVKELNEQFKRKIKIVLPVDLVLIIAASFTCYCTNMENTYGLEVVGHIPKGIPPPRVPPMRILSAVITEAFGVAFVGYVASLALAQGSAKKFKYSVDDNQELLAHGLSNVISSFFFCIPSAAAMGRTAGLYSTGARTQCVLASIIVVGLKGMLIQFRDLRKYWNVDKIDWGIWVSTYIFSICFAANVGLLFGVVCTVAIVIGRFPRAKTLSIKNMKEMEFKLKREVDDETVHQVKIIFINNPLVFLNAKKFRADLMNIIQRENTSSQPHDEISKCEQNTLLNSLSNGNCNEEATQPCLNEKCSLILDCSGLTFFDSSGVSMLVEVYTDSNSKSVDVSFAHCTASLIRAMKYCGNLDPEKPIFFESVPAALSSIHSNKSLSKLSDHSEI
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981880..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2095956..2096004,2105685..2105785,2110994..2111048,2111131..2111234,2112294..2112329)
location: region:1981880-2112329:1
so has part: feature:1981880-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2095956-2096004:1:exon
so has part: feature:2105685-2105785:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112294-2112329:1:exon

XP_031295160.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1981880-1982072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2015934-2016044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2021983-2022155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044390-2044554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2058192-2058344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2061768-2061850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2065160-2065307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2067327-2067440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2076405-2076500:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2080394-2080500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2081500-2081566:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2084415-2084552:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2095956-2096004:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2105685-2105785:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2110994-2111048:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2111131-2111234:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2112294-2112329:1:exon

SLC26A7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC26A7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anion exchange transporter isoform X2
translation: MTGAKRKKRSVLWTKMHTPHCEDFKQWCRRRLPILEWATRYNLKENLLPDTVSGIMLAVQQVTQGLAFAVLSSVHPVFGLYGSLFPAIIYAVFGMGRHVSTGTFALTSLISANAVERLVPLSSQNLTAQSNTSVLGLSDFEMQRISVAAAVSFLGGVIQVAMFVLHLGSATFLLTEPVISAMTTGAATHVVTSQVKYLLGMKIPYISGPLGFFYIYAHVFQNIKSVRLEALLLSLLSIVVLVLVKELNEQFKRKIKIVLPVDLVLIIAASFTCYCTNMENTYGLEVVGHIPKGIPPPRVPPMRILSAVITEAFGVAFVGYVASLALAQGSAKKFKYSVDDNQELLAHGLSNVISSFFFCIPSAAAMGRTAGLYSTGARTQVACLISCVSVLMVIYAAGPLLYWLPMCVLASIIVVGLKGMLIQFRDLRKYWNVDKIDWGIWVSTYIFSICFAANVGLLFGVVCTVAIVIGRFPRAKTLSIKNMKEMEFKLKREVDDETVHQVKIIFINNPLVFLNAKKFRADLMNIIQRENTSSQPHDEISKCEQNTLLNSLSNGNCNEEATQPCLNEKCSLILDCSGLTFFDSSGVSMLVEVYTDSNSKSVDVSFAHCTASLIRAMKYCGNLDPEKPIFFESVPAALSSIHSNKK
SIO_010081: SLC26A7
subclass of: SO_0000673
so part of: SLC26A7
location: join(1981880..1982072,2015934..2016044,2021983..2022155,2044390..2044554,2058192..2058344,2061768..2061850,2065160..2065307,2067327..2067440,2075178..2075255,2076405..2076500,2080394..2080500,2081500..2081566,2084415..2084552,2095956..2096004,2105685..2105785,2110994..2111048,2111131..2111234,2112057..2112062)
location: region:1981880-2112062:1
so has part: feature:1981880-1982072:1:exon
so has part: feature:2015934-2016044:1:exon
so has part: feature:2021983-2022155:1:exon
so has part: feature:2044390-2044554:1:exon
so has part: feature:2058192-2058344:1:exon
so has part: feature:2061768-2061850:1:exon
so has part: feature:2065160-2065307:1:exon
so has part: feature:2067327-2067440:1:exon
so has part: feature:2075178-2075255:1:exon
so has part: feature:2076405-2076500:1:exon
so has part: feature:2080394-2080500:1:exon
so has part: feature:2081500-2081566:1:exon
so has part: feature:2084415-2084552:1:exon
so has part: feature:2095956-2096004:1:exon
so has part: feature:2105685-2105785:1:exon
so has part: feature:2110994-2111048:1:exon
so has part: feature:2111131-2111234:1:exon
so has part: feature:2112057-2112062:1:exon

XP_010974298.2
type: Protein
SIO_000068: ncbiprotein

position:2112062:1
position: 2112062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981880-1982072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2015934-2016044:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2021983-2022155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2044390-2044554:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2058192-2058344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2061768-2061850:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2065160-2065307:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2067327-2067440:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2075178-2075255:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2076405-2076500:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2080394-2080500:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2081500-2081566:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2084415-2084552:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2095956-2096004:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2105685-2105785:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2110994-2111048:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2111131-2111234:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2112057-2112062:1:exon

RUNX1T1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2640694..2779661)
location: region:2640694-2779661:-1
so has part: feature:2640694-2779661:-1:exon
subclass of: SO_0000010

105085729
type: Gene
SIO_000068: ncbigene

position:2640694:-1
position: 2640694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2779661:-1
position: 2779661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2640694-2779661:-1:exon

RUNX1T1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RUNX1T1
product: RUNX1 partner transcriptional co-repressor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_031439304.1
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2640694..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699556,2754235..2754407,2779106..2779661))
location: region:2640694-2779661:-1
so has part: feature:2779106-2779661:-1:exon
so has part: feature:2754235-2754407:-1:exon
so has part: feature:2699419-2699556:-1:exon
so has part: feature:2697132-2697373:-1:exon
so has part: feature:2693044-2693133:-1:exon
so has part: feature:2688103-2688284:-1:exon
so has part: feature:2676378-2676628:-1:exon
so has part: feature:2671695-2671780:-1:exon
so has part: feature:2670938-2671139:-1:exon
so has part: feature:2661815-2661883:-1:exon
so has part: feature:2656435-2656625:-1:exon
so has part: feature:2640694-2644720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2779106-2779661:-1:exon

position:2779106:-1
position: 2779106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2754235-2754407:-1:exon

position:2754235:-1
position: 2754235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2754407:-1
position: 2754407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2699419-2699556:-1:exon

position:2699419:-1
position: 2699419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2699556:-1
position: 2699556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2697132-2697373:-1:exon

position:2697132:-1
position: 2697132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2697373:-1
position: 2697373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2693044-2693133:-1:exon

position:2693044:-1
position: 2693044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2693133:-1
position: 2693133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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RUNX1T1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RUNX1T1
product: RUNX1 partner transcriptional co-repressor 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031439305.1
SIO_010081: RUNX1T1
subclass of: SO_0000673
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location: complement(join(2640694..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699556,2779106..2779660))
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urn:…
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RUNX1T1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RUNX1T1
product: RUNX1 partner transcriptional co-repressor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031439303.1
SIO_010081: RUNX1T1
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urn:…
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SIO_000300: 12
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RUNX1T1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RUNX1T1
product: RUNX1 partner transcriptional co-repressor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031439302.1
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
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SIO_000300: 11
SIO_000628: feature:2640694-2644720:-1:exon

RUNX1T1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RUNX1T1
product: RUNX1 partner transcriptional co-repressor 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031439306.1
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2640694..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699556,2740653..2741074))
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SIO_000628: feature:2640694-2644720:-1:exon

RUNX1T1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RUNX1T1
product: RUNX1 partner transcriptional co-repressor 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031439308.1
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
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RUNX1T1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RUNX1T1
product: RUNX1 partner transcriptional co-repressor 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031439307.1
SIO_010081: RUNX1T1
subclass of: SO_0000673
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urn:…
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RUNX1T1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T1 isoform X4
translation: MVGLSGPVQYRTEKHSTMPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPSNGLPYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWVRRYSDAEDLKKGGSGGSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
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XP_031295165.1
type: Protein
SIO_000068: ncbiprotein

position:2644445:-1
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reference: sequence
type: ReverseStrandPosition
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position:2779133:-1
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urn:…
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SIO_000300: 11
SIO_000628: feature:2644445-2644720:-1:exon

RUNX1T1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T1 isoform X2
translation: MVGLSGPVQWRLGFAALTSSLSCSTSGKLFIPLVAEVGRDRTEKHSTMPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPSNGLPYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWVRRYSDAEDLKKGGSGGSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2644445..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699556,2701349..2701438,2779106..2779133))
location: region:2644445-2779133:-1
so has part: feature:2779106-2779133:-1:exon
so has part: feature:2701349-2701438:-1:exon
so has part: feature:2699419-2699556:-1:exon
so has part: feature:2697132-2697373:-1:exon
so has part: feature:2693044-2693133:-1:exon
so has part: feature:2688103-2688284:-1:exon
so has part: feature:2676378-2676628:-1:exon
so has part: feature:2671695-2671780:-1:exon
so has part: feature:2670938-2671139:-1:exon
so has part: feature:2661815-2661883:-1:exon
so has part: feature:2656435-2656625:-1:exon
so has part: feature:2644445-2644720:-1:exon

XP_031295163.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2779106-2779133:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2701349-2701438:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2699419-2699556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2697132-2697373:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2693044-2693133:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2688103-2688284:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2676378-2676628:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2671695-2671780:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2670938-2671139:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2661815-2661883:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2656435-2656625:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2644445-2644720:-1:exon

RUNX1T1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T1 isoform X1
translation: MCHPDKPFTSDKLRCVFNEYKAAVWVPPRLRPPLLRSFAEDRTEKHSTMPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPSNGLPYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWVRRYSDAEDLKKGGSGGSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2644445..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699556,2771560..2771680))
location: region:2644445-2771680:-1
so has part: feature:2771560-2771680:-1:exon
so has part: feature:2699419-2699556:-1:exon
so has part: feature:2697132-2697373:-1:exon
so has part: feature:2693044-2693133:-1:exon
so has part: feature:2688103-2688284:-1:exon
so has part: feature:2676378-2676628:-1:exon
so has part: feature:2671695-2671780:-1:exon
so has part: feature:2670938-2671139:-1:exon
so has part: feature:2661815-2661883:-1:exon
so has part: feature:2656435-2656625:-1:exon
so has part: feature:2644445-2644720:-1:exon

XP_031295162.1
type: Protein
SIO_000068: ncbiprotein

position:2771680:-1
position: 2771680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2771560-2771680:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2699419-2699556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2697132-2697373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2693044-2693133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2688103-2688284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2676378-2676628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2671695-2671780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2670938-2671139:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2661815-2661883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2656435-2656625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2644445-2644720:-1:exon

RUNX1T1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T1 isoform X3
translation: MISVKRNTWRALSLVIGDCRKKGNFEYCQDRTEKHSTMPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPSNGLPYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWVRRYSDAEDLKKGGSGGSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2644445..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699556,2754235..2754322))
location: region:2644445-2754322:-1
so has part: feature:2754235-2754322:-1:exon
so has part: feature:2699419-2699556:-1:exon
so has part: feature:2697132-2697373:-1:exon
so has part: feature:2693044-2693133:-1:exon
so has part: feature:2688103-2688284:-1:exon
so has part: feature:2676378-2676628:-1:exon
so has part: feature:2671695-2671780:-1:exon
so has part: feature:2670938-2671139:-1:exon
so has part: feature:2661815-2661883:-1:exon
so has part: feature:2656435-2656625:-1:exon
so has part: feature:2644445-2644720:-1:exon

XP_031295164.1
type: Protein
SIO_000068: ncbiprotein

position:2754322:-1
position: 2754322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2754235-2754322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2699419-2699556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2697132-2697373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2693044-2693133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2688103-2688284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2676378-2676628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2671695-2671780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2670938-2671139:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2661815-2661883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2656435-2656625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2644445-2644720:-1:exon

RUNX1T1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T1 isoform X5
translation: MPDRTEKHSTMPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPSNGLPYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWVRRYSDAEDLKKGGSGGSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2644445..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699556,2740653..2740659))
location: region:2644445-2740659:-1
so has part: feature:2740653-2740659:-1:exon
so has part: feature:2699419-2699556:-1:exon
so has part: feature:2697132-2697373:-1:exon
so has part: feature:2693044-2693133:-1:exon
so has part: feature:2688103-2688284:-1:exon
so has part: feature:2676378-2676628:-1:exon
so has part: feature:2671695-2671780:-1:exon
so has part: feature:2670938-2671139:-1:exon
so has part: feature:2661815-2661883:-1:exon
so has part: feature:2656435-2656625:-1:exon
so has part: feature:2644445-2644720:-1:exon

XP_031295166.1
type: Protein
SIO_000068: ncbiprotein

position:2740659:-1
position: 2740659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2740653-2740659:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2699419-2699556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2697132-2697373:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2693044-2693133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2688103-2688284:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2676378-2676628:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2671695-2671780:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2670938-2671139:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2661815-2661883:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2656435-2656625:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2644445-2644720:-1:exon

RUNX1T1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T1 isoform X6
translation: MPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPSNGLPYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWVRRYSDAEDLKKGGSGGSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2644445..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699533))
location: region:2644445-2699533:-1
so has part: feature:2699419-2699533:-1:exon
so has part: feature:2697132-2697373:-1:exon
so has part: feature:2693044-2693133:-1:exon
so has part: feature:2688103-2688284:-1:exon
so has part: feature:2676378-2676628:-1:exon
so has part: feature:2671695-2671780:-1:exon
so has part: feature:2670938-2671139:-1:exon
so has part: feature:2661815-2661883:-1:exon
so has part: feature:2656435-2656625:-1:exon
so has part: feature:2644445-2644720:-1:exon

XP_031295167.1
type: Protein
SIO_000068: ncbiprotein

position:2699533:-1
position: 2699533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2699419-2699533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697132-2697373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2693044-2693133:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2688103-2688284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2676378-2676628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2671695-2671780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2670938-2671139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2661815-2661883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2656435-2656625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2644445-2644720:-1:exon

RUNX1T1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RUNX1T1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CBFA2T1 isoform X6
translation: MPDSPVDVKTPSRLTPPTMPPPPTTQGAPRTSSFTPTTLTNGTSHSPTALNGAPSPPNGFSNGPSSSSSSSLANQQLPPACGARQLSKLKRFLTTLQQFGNDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQNPAQYLAQHEQLLLDASTTSPVDSSELLLDVNENGKRRTPDRTKENGFDREPLHSEHPSKRPCTISPGQRYSPSNGLPYQPNGLPHPTPPPPQHYRLDDMAIAHHYRDSYRHPSHRDLRDRNRPMGLHGTRQEEMIDHRLTDREWAEEWKHLDHLLNCIMDMVEKTRRSLTVLRRCQEADREELNYWVRRYSDAEDLKKGGSGGSSHSRQQSPVNPDPVALDAHREFLHRPASGYVPEEIWKKAEEAVNEVKRQAMTELQKAVSEAERKAHDMITSERAKMERTVAEAKRQAAEDALAVINQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICGQTLQAQQQGDTPAVSSSVTPNSGAGSPMDTPPAATPRSTTPGTPSTIETTPR
SIO_010081: RUNX1T1
subclass of: SO_0000673
so part of: RUNX1T1
location: complement(join(2644445..2644720,2656435..2656625,2661815..2661883,2670938..2671139,2671695..2671780,2676378..2676628,2688103..2688284,2693044..2693133,2697132..2697373,2699419..2699533))
location: region:2644445-2699533:-1
so has part: feature:2699419-2699533:-1:exon
so has part: feature:2697132-2697373:-1:exon
so has part: feature:2693044-2693133:-1:exon
so has part: feature:2688103-2688284:-1:exon
so has part: feature:2676378-2676628:-1:exon
so has part: feature:2671695-2671780:-1:exon
so has part: feature:2670938-2671139:-1:exon
so has part: feature:2661815-2661883:-1:exon
so has part: feature:2656435-2656625:-1:exon
so has part: feature:2644445-2644720:-1:exon

XP_031295168.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2699419-2699533:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2697132-2697373:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2693044-2693133:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2688103-2688284:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2676378-2676628:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2671695-2671780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2670938-2671139:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2661815-2661883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2656435-2656625:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2644445-2644720:-1:exon

LOC105085751
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105085751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2811826..2839378)
location: region:2811826-2839378:-1
so has part: feature:2811826-2839378:-1:exon

105085751
type: Gene
SIO_000068: ncbigene

position:2811826:-1
position: 2811826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2839378:-1
position: 2839378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811826-2839378:-1:exon

LOC105085751
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085751
subclass of: SO_0000673
so part of: LOC105085751
location: complement(2811826..2812470)
location: region:2811826-2812470:-1
so has part: feature:2811826-2812470:-1:exon

position:2812470:-1
position: 2812470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2811826-2812470:-1:exon

LOC105085751
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085751
subclass of: SO_0000673
so part of: LOC105085751
location: complement(2830039..2830084)
location: region:2830039-2830084:-1
so has part: feature:2830039-2830084:-1:exon

position:2830039:-1
position: 2830039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2830084:-1
position: 2830084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2830039-2830084:-1:exon

LOC105085751
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085751
subclass of: SO_0000673
so part of: LOC105085751
location: complement(2838999..2839171)
location: region:2838999-2839171:-1
so has part: feature:2838999-2839171:-1:exon

position:2838999:-1
position: 2838999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2839171:-1
position: 2839171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2838999-2839171:-1:exon

LOC105085751
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085751
subclass of: SO_0000673
so part of: LOC105085751
location: complement(2839331..2839378)
location: region:2839331-2839378:-1
so has part: feature:2839331-2839378:-1:exon

position:2839331:-1
position: 2839331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2839331-2839378:-1:exon

TRIQK
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRIQK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3439511..3518652)
location: region:3439511-3518652:-1
so has part: feature:3439511-3518652:-1:exon
subclass of: SO_0000010

105085730
type: Gene
SIO_000068: ncbigene

position:3439511:-1
position: 3439511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3518652:-1
position: 3518652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3439511-3518652:-1:exon

TRIQK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TRIQK
product: triple QxxK/R motif containing, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_010975998.2
SIO_010081: TRIQK
subclass of: SO_0000673
so part of: TRIQK
location: complement(join(3439511..3442644,3448072..3448157,3474145..3474223,3504764..3504921,3518517..3518652))
location: region:3439511-3518652:-1
so has part: feature:3518517-3518652:-1:exon
so has part: feature:3504764-3504921:-1:exon
so has part: feature:3474145-3474223:-1:exon
so has part: feature:3448072-3448157:-1:exon
so has part: feature:3439511-3442644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3518517-3518652:-1:exon

position:3518517:-1
position: 3518517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3504764-3504921:-1:exon

position:3504764:-1
position: 3504764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3504921:-1
position: 3504921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3474145-3474223:-1:exon

position:3474145:-1
position: 3474145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3474223:-1
position: 3474223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3448072-3448157:-1:exon

position:3448072:-1
position: 3448072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3448157:-1
position: 3448157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3439511-3442644:-1:exon

position:3442644:-1
position: 3442644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRIQK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TRIQK
product: triple QxxK/R motif containing, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_031439309.1
SIO_010081: TRIQK
subclass of: SO_0000673
so part of: TRIQK
location: complement(join(3439511..3442644,3448072..3448157,3474145..3474226,3504764..3504921,3518517..3518652))
location: region:3439511-3518652:-1
so has part: feature:3518517-3518652:-1:exon
so has part: feature:3504764-3504921:-1:exon
so has part: feature:3474145-3474226:-1:exon
so has part: feature:3448072-3448157:-1:exon
so has part: feature:3439511-3442644:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3518517-3518652:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3504764-3504921:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3474145-3474226:-1:exon

position:3474226:-1
position: 3474226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3448072-3448157:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3439511-3442644:-1:exon

TRIQK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TRIQK
product: triple QxxK/R motif containing, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031439310.1
SIO_010081: TRIQK
subclass of: SO_0000673
so part of: TRIQK
location: complement(join(3439511..3442644,3448072..3448157,3474145..3474226,3496836..3496934,3504764..3504921,3518312..3518422))
location: region:3439511-3518422:-1
so has part: feature:3518312-3518422:-1:exon
so has part: feature:3504764-3504921:-1:exon
so has part: feature:3496836-3496934:-1:exon
so has part: feature:3474145-3474226:-1:exon
so has part: feature:3448072-3448157:-1:exon
so has part: feature:3439511-3442644:-1:exon

position:3518422:-1
position: 3518422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3518312-3518422:-1:exon

position:3518312:-1
position: 3518312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3504764-3504921:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3496836-3496934:-1:exon

position:3496836:-1
position: 3496836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3496934:-1
position: 3496934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3474145-3474226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3448072-3448157:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3439511-3442644:-1:exon

TRIQK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TRIQK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: triple QxxK/R motif-containing protein
translation: MGRKDASTIKLPVDQYRKQIGKQDYKKTKPILRATKLKAEAKKTALGIKEVGLVLAALLALLLAFYAFFYLRLSTDVNPDLEPDED
SIO_010081: TRIQK
subclass of: SO_0000673
so part of: TRIQK
location: complement(join(3442531..3442644,3448072..3448157,3474145..3474205))
location: region:3442531-3474205:-1
so has part: feature:3474145-3474205:-1:exon
so has part: feature:3448072-3448157:-1:exon
so has part: feature:3442531-3442644:-1:exon

XP_031295169.1
type: Protein
SIO_000068: ncbiprotein

position:3442531:-1
position: 3442531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3474205:-1
position: 3474205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3474145-3474205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3448072-3448157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442531-3442644:-1:exon

TRIQK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TRIQK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: triple QxxK/R motif-containing protein
translation: MGRKDASTIKLPVDQYRKQIGKQDYKKTKPILRATKLKAEAKKTALGIKEVGLVLAALLALLLAFYAFFYLRLSTDVNPDLEPDED
SIO_010081: TRIQK
subclass of: SO_0000673
so part of: TRIQK
location: complement(join(3442531..3442644,3448072..3448157,3474145..3474205))
location: region:3442531-3474205:-1
so has part: feature:3474145-3474205:-1:exon
so has part: feature:3448072-3448157:-1:exon
so has part: feature:3442531-3442644:-1:exon

XP_031295170.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3474145-3474205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3448072-3448157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442531-3442644:-1:exon

TRIQK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TRIQK
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: triple QxxK/R motif-containing protein
translation: MGRKDASTIKLPVDQYRKQIGKQDYKKTKPILRATKLKAEAKKTALGIKEVGLVLAALLALLLAFYAFFYLRLSTDVNPDLEPDED
SIO_010081: TRIQK
subclass of: SO_0000673
so part of: TRIQK
location: complement(join(3442531..3442644,3448072..3448157,3474145..3474205))
location: region:3442531-3474205:-1
so has part: feature:3474145-3474205:-1:exon
so has part: feature:3448072-3448157:-1:exon
so has part: feature:3442531-3442644:-1:exon

XP_010974300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3474145-3474205:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3448072-3448157:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3442531-3442644:-1:exon

LOC116148890
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148890
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3611303..3633473
location: region:3611303-3633473:1
so has part: feature:3611303-3633473:1:exon
subclass of: SO_0000011

116148890
type: Gene
SIO_000068: ncbigene

position:3611303:1
position: 3611303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3633473:1
position: 3633473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3611303-3633473:1:exon

LOC116148890
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148890
product: uncharacterized LOC116148890
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004132462.1
SIO_010081: LOC116148890
subclass of: SO_0000673
so part of: LOC116148890
location: join(3611303..3611605,3615667..3615674,3631656..3631663,3633462..3633473)
location: region:3611303-3633473:1
so has part: feature:3611303-3611605:1:exon
so has part: feature:3615667-3615674:1:exon
so has part: feature:3631656-3631663:1:exon
so has part: feature:3633462-3633473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3611303-3611605:1:exon

position:3611605:1
position: 3611605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3615667-3615674:1:exon

position:3615667:1
position: 3615667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3615674:1
position: 3615674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3631656-3631663:1:exon

position:3631656:1
position: 3631656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3631663:1
position: 3631663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3633462-3633473:1:exon

position:3633462:1
position: 3633462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149043
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149043
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3810289..3810394)
location: region:3810289-3810394:-1
so has part: feature:3810289-3810394:-1:exon
subclass of: SO_0000623

116149043
type: Gene
SIO_000068: ncbigene

position:3810289:-1
position: 3810289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3810394:-1
position: 3810394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3810289-3810394:-1:exon

LOC116149043
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116149043
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132679.1
SIO_010081: LOC116149043
subclass of: SO_0000673
so part of: LOC116149043
location: complement(3810289..3810394)
location: region:3810289-3810394:-1
so has part: feature:3810289-3810394:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3810289-3810394:-1:exon

LOC116148891
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148891
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3918784..4083895)
location: region:3918784-4083895:-1
so has part: feature:3918784-4083895:-1:exon
subclass of: SO_0000011

116148891
type: Gene
SIO_000068: ncbigene

position:3918784:-1
position: 3918784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4083895:-1
position: 4083895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3918784-4083895:-1:exon

LOC116148891
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148891
product: uncharacterized LOC116148891, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132466.1
SIO_010081: LOC116148891
subclass of: SO_0000673
so part of: LOC116148891
location: complement(join(3918784..3920223,3925375..3925474,3925563..3925657,3956494..3956577,3997154..3997477,4083649..4083895))
location: region:3918784-4083895:-1
so has part: feature:4083649-4083895:-1:exon
so has part: feature:3997154-3997477:-1:exon
so has part: feature:3956494-3956577:-1:exon
so has part: feature:3925563-3925657:-1:exon
so has part: feature:3925375-3925474:-1:exon
so has part: feature:3918784-3920223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4083649-4083895:-1:exon

position:4083649:-1
position: 4083649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3997154-3997477:-1:exon

position:3997154:-1
position: 3997154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3997477:-1
position: 3997477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3956494-3956577:-1:exon

position:3956494:-1
position: 3956494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3956577:-1
position: 3956577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3925563-3925657:-1:exon

position:3925563:-1
position: 3925563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925657:-1
position: 3925657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3925375-3925474:-1:exon

position:3925375:-1
position: 3925375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3925474:-1
position: 3925474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3918784-3920223:-1:exon

position:3920223:-1
position: 3920223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148891
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148891
product: uncharacterized LOC116148891, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132464.1
SIO_010081: LOC116148891
subclass of: SO_0000673
so part of: LOC116148891
location: complement(join(3918784..3920937,3925375..3925474,3925563..3925657,3956494..3956577,3997154..3997477,4083649..4083895))
location: region:3918784-4083895:-1
so has part: feature:4083649-4083895:-1:exon
so has part: feature:3997154-3997477:-1:exon
so has part: feature:3956494-3956577:-1:exon
so has part: feature:3925563-3925657:-1:exon
so has part: feature:3925375-3925474:-1:exon
so has part: feature:3918784-3920937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4083649-4083895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3997154-3997477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3956494-3956577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3925563-3925657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3925375-3925474:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3918784-3920937:-1:exon

position:3920937:-1
position: 3920937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148891
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148891
product: uncharacterized LOC116148891, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_004132463.1
SIO_010081: LOC116148891
subclass of: SO_0000673
so part of: LOC116148891
location: complement(join(3985472..3985890,3997154..3997477,4083649..4083895))
location: region:3985472-4083895:-1
so has part: feature:4083649-4083895:-1:exon
so has part: feature:3997154-3997477:-1:exon
so has part: feature:3985472-3985890:-1:exon

position:3985472:-1
position: 3985472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4083649-4083895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3997154-3997477:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3985472-3985890:-1:exon

position:3985890:-1
position: 3985890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148891
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148891
product: uncharacterized LOC116148891, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132465.1
SIO_010081: LOC116148891
subclass of: SO_0000673
so part of: LOC116148891
location: complement(join(3985472..3985890,3997154..3997477,4017643..4017830,4083649..4083895))
location: region:3985472-4083895:-1
so has part: feature:4083649-4083895:-1:exon
so has part: feature:4017643-4017830:-1:exon
so has part: feature:3997154-3997477:-1:exon
so has part: feature:3985472-3985890:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4083649-4083895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4017643-4017830:-1:exon

position:4017643:-1
position: 4017643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4017830:-1
position: 4017830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3997154-3997477:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3985472-3985890:-1:exon

FAM92A
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FAM92A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4083895..4107631
location: region:4083895-4107631:1
so has part: feature:4083895-4107631:1:exon
subclass of: SO_0000010

105085731
type: Gene
SIO_000068: ncbigene

position:4083895:1
position: 4083895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4107631:1
position: 4107631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4083895-4107631:1:exon

FAM92A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM92A
product: family with sequence similarity 92 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_031439317.1
SIO_010081: FAM92A
subclass of: SO_0000673
so part of: FAM92A
location: join(4083895..4084170,4084660..4084894,4087151..4087219,4088168..4088269,4090333..4090338,4091547..4091651,4100319..4100432,4105187..4105306,4106985..4107631)
location: region:4083895-4107631:1
so has part: feature:4083895-4084170:1:exon
so has part: feature:4084660-4084894:1:exon
so has part: feature:4087151-4087219:1:exon
so has part: feature:4088168-4088269:1:exon
so has part: feature:4090333-4090338:1:exon
so has part: feature:4091547-4091651:1:exon
so has part: feature:4100319-4100432:1:exon
so has part: feature:4105187-4105306:1:exon
so has part: feature:4106985-4107631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4083895-4084170:1:exon

position:4084170:1
position: 4084170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4084660-4084894:1:exon

position:4084660:1
position: 4084660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4084894:1
position: 4084894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4087151-4087219:1:exon

position:4087151:1
position: 4087151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4087219:1
position: 4087219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4088168-4088269:1:exon

position:4088168:1
position: 4088168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4088269:1
position: 4088269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4090333-4090338:1:exon

position:4090333:1
position: 4090333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4090338:1
position: 4090338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4091547-4091651:1:exon

position:4091547:1
position: 4091547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4091651:1
position: 4091651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4100319-4100432:1:exon

position:4100319:1
position: 4100319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4100432:1
position: 4100432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4105187-4105306:1:exon

position:4105187:1
position: 4105187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4105306:1
position: 4105306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4106985-4107631:1:exon

position:4106985:1
position: 4106985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM92A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FAM92A
product: family with sequence similarity 92 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_031439316.1
SIO_010081: FAM92A
subclass of: SO_0000673
so part of: FAM92A
location: join(4083980..4084170,4084660..4084894,4087151..4087219,4088168..4088269,4090333..4090338,4091547..4091651,4105187..4105306,4106985..4107631)
location: region:4083980-4107631:1
so has part: feature:4083980-4084170:1:exon
so has part: feature:4084660-4084894:1:exon
so has part: feature:4087151-4087219:1:exon
so has part: feature:4088168-4088269:1:exon
so has part: feature:4090333-4090338:1:exon
so has part: feature:4091547-4091651:1:exon
so has part: feature:4105187-4105306:1:exon
so has part: feature:4106985-4107631:1:exon

position:4083980:1
position: 4083980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4083980-4084170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4084660-4084894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4087151-4087219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4088168-4088269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4090333-4090338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4091547-4091651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4105187-4105306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4106985-4107631:1:exon

FAM92A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM92A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM92A isoform X2
translation: MLRRSLENRDAQTRQLQDAVTNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINVYASTETPHLKQGLKNFADEFAKLQDYRQAEVERLEAKVVEPLKAYGTIVRMKRDDLKATLTARNREAKQLTQLERTRQRNPSDRHVISQAETELQRATMDATRTTRHLEETIDNFEKQKIKDIKTIFSEFITIEMLFHGKALEVYTAAYQNIQKIDEEEDLEVFRNSLYPPDYSSRLDIVRANSKSPLQRSLSAKCVSGTGQVSTCRLRRDQQTDDDDEEDEDLDVTEEEN
SIO_010081: FAM92A
subclass of: SO_0000673
so part of: FAM92A
location: join(4084145..4084170,4084660..4084894,4087151..4087219,4088168..4088269,4090333..4090338,4091547..4091651,4100319..4100432,4105187..4105306,4106985..4107074)
location: region:4084145-4107074:1
so has part: feature:4084145-4084170:1:exon
so has part: feature:4084660-4084894:1:exon
so has part: feature:4087151-4087219:1:exon
so has part: feature:4088168-4088269:1:exon
so has part: feature:4090333-4090338:1:exon
so has part: feature:4091547-4091651:1:exon
so has part: feature:4100319-4100432:1:exon
so has part: feature:4105187-4105306:1:exon
so has part: feature:4106985-4107074:1:exon

XP_031295177.1
type: Protein
SIO_000068: ncbiprotein

position:4084145:1
position: 4084145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4107074:1
position: 4107074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4084145-4084170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4084660-4084894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4087151-4087219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4088168-4088269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4090333-4090338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4091547-4091651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4100319-4100432:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4105187-4105306:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4106985-4107074:1:exon

FAM92A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FAM92A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM92A isoform X1
translation: MLRRSLENRDAQTRQLQDAVTNVEKHFGELCQIFAAYVRKTARLRDKADLLVNEINVYASTETPHLKQGLKNFADEFAKLQDYRQAEVERLEAKVVEPLKAYGTIVRMKRDDLKATLTARNREAKQLTQLERTRQRNPSDRHVISQAETELQRATMDATRTTRHLEETIDNFEKQKIKDIKVFRNSLYPPDYSSRLDIVRANSKSPLQRSLSAKCVSGTGQVSTCRLRRDQQTDDDDEEDEDLDVTEEEN
SIO_010081: FAM92A
subclass of: SO_0000673
so part of: FAM92A
location: join(4084145..4084170,4084660..4084894,4087151..4087219,4088168..4088269,4090333..4090338,4091547..4091651,4105187..4105306,4106985..4107074)
location: region:4084145-4107074:1
so has part: feature:4084145-4084170:1:exon
so has part: feature:4084660-4084894:1:exon
so has part: feature:4087151-4087219:1:exon
so has part: feature:4088168-4088269:1:exon
so has part: feature:4090333-4090338:1:exon
so has part: feature:4091547-4091651:1:exon
so has part: feature:4105187-4105306:1:exon
so has part: feature:4106985-4107074:1:exon

XP_031295176.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4084145-4084170:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4084660-4084894:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4087151-4087219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4088168-4088269:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4090333-4090338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4091547-4091651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4105187-4105306:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4106985-4107074:1:exon

RBM12B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RBM12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4108612..4118783)
location: region:4108612-4118783:-1
so has part: feature:4108612-4118783:-1:exon
subclass of: SO_0000010

105085752
type: Gene
SIO_000068: ncbigene

position:4108612:-1
position: 4108612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4118783:-1
position: 4118783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4108612-4118783:-1:exon

RBM12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RBM12B
product: RNA binding motif protein 12B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031439311.1
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(join(4108612..4114708,4115290..4115339,4118645..4118783))
location: region:4108612-4118783:-1
so has part: feature:4118645-4118783:-1:exon
so has part: feature:4115290-4115339:-1:exon
so has part: feature:4108612-4114708:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4118645-4118783:-1:exon

position:4118645:-1
position: 4118645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4115290-4115339:-1:exon

position:4115290:-1
position: 4115290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4115339:-1
position: 4115339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4108612-4114708:-1:exon

position:4114708:-1
position: 4114708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBM12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RBM12B
product: RNA binding motif protein 12B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_031439315.1
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(join(4108612..4114708,4118645..4118781))
location: region:4108612-4118781:-1
so has part: feature:4118645-4118781:-1:exon
so has part: feature:4108612-4114708:-1:exon

position:4118781:-1
position: 4118781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4118645-4118781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4108612-4114708:-1:exon

RBM12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RBM12B
product: RNA binding motif protein 12B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031439313.1
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(join(4108612..4114708,4115290..4115339,4118627..4118778))
location: region:4108612-4118778:-1
so has part: feature:4118627-4118778:-1:exon
so has part: feature:4115290-4115339:-1:exon
so has part: feature:4108612-4114708:-1:exon

position:4118778:-1
position: 4118778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4118627-4118778:-1:exon

position:4118627:-1
position: 4118627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4115290-4115339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4108612-4114708:-1:exon

RBM12B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RBM12B
product: RNA binding motif protein 12B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031439312.1
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(join(4108612..4114708,4115290..4115339,4118412..4118573))
location: region:4108612-4118573:-1
so has part: feature:4118412-4118573:-1:exon
so has part: feature:4115290-4115339:-1:exon
so has part: feature:4108612-4114708:-1:exon

position:4118573:-1
position: 4118573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4118412-4118573:-1:exon

position:4118412:-1
position: 4118412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4115290-4115339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4108612-4114708:-1:exon

RBM12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RBM12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 12B
translation: MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRSGGLIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGASGVGSLSNFVEAVKEEASNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCVDGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNAIKEGDIPMRTEEHSPPRGINDRHFWKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDLRNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHVDPVSRKQMLKFIECYEKKRPASAEKERLGHVSQKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFNLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEVQMQEFGVNFSSMSSERMHDHTQSCDRDDYPHLFDSDDLPVYSAGPSENFRHQQEDLRQLDNFKHLQGDFRPPDRRPPEDFRHSPEDFRRSPEDFRHLREEHFRGPPEEDLRRPWEEEDFRYPREEDWRRPPEDDFRRPPKEDFRRPPEEDWRRPPEGDFRRPPEEDWRRLPEEDFRRLPPGEWRRPPEEGFRRPHEEDFRRLPEEDFQRPPEEDFRRPHEEDFRHSPEEDFRRSPEEDFRRPPPEHFRRPPPEHFRRPPPEHFRRPPSEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPREEDFRHSLDEDFRGPPDEEFRHPPDEDFRSPQEDDFRCPSDEDFRRLPEEDLREAPEEDPRLPDNFRLPGEELRSPPDDFRGHRPFVNFGRPEGGKFDFGKRNMGSFPEGRFMPDPKLNCNSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPESVSIQYNDQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(4111693..4114680)
location: region:4111693-4114680:-1
so has part: feature:4111693-4114680:-1:exon

XP_031295171.1
type: Protein
SIO_000068: ncbiprotein

position:4111693:-1
position: 4111693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4114680:-1
position: 4114680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4111693-4114680:-1:exon

RBM12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RBM12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 12B
translation: MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRSGGLIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGASGVGSLSNFVEAVKEEASNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCVDGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNAIKEGDIPMRTEEHSPPRGINDRHFWKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDLRNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHVDPVSRKQMLKFIECYEKKRPASAEKERLGHVSQKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFNLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEVQMQEFGVNFSSMSSERMHDHTQSCDRDDYPHLFDSDDLPVYSAGPSENFRHQQEDLRQLDNFKHLQGDFRPPDRRPPEDFRHSPEDFRRSPEDFRHLREEHFRGPPEEDLRRPWEEEDFRYPREEDWRRPPEDDFRRPPKEDFRRPPEEDWRRPPEGDFRRPPEEDWRRLPEEDFRRLPPGEWRRPPEEGFRRPHEEDFRRLPEEDFQRPPEEDFRRPHEEDFRHSPEEDFRRSPEEDFRRPPPEHFRRPPPEHFRRPPPEHFRRPPSEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPREEDFRHSLDEDFRGPPDEEFRHPPDEDFRSPQEDDFRCPSDEDFRRLPEEDLREAPEEDPRLPDNFRLPGEELRSPPDDFRGHRPFVNFGRPEGGKFDFGKRNMGSFPEGRFMPDPKLNCNSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPESVSIQYNDQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(4111693..4114680)
location: region:4111693-4114680:-1
so has part: feature:4111693-4114680:-1:exon

XP_031295172.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4111693-4114680:-1:exon

RBM12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RBM12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 12B
translation: MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRSGGLIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGASGVGSLSNFVEAVKEEASNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCVDGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNAIKEGDIPMRTEEHSPPRGINDRHFWKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDLRNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHVDPVSRKQMLKFIECYEKKRPASAEKERLGHVSQKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFNLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEVQMQEFGVNFSSMSSERMHDHTQSCDRDDYPHLFDSDDLPVYSAGPSENFRHQQEDLRQLDNFKHLQGDFRPPDRRPPEDFRHSPEDFRRSPEDFRHLREEHFRGPPEEDLRRPWEEEDFRYPREEDWRRPPEDDFRRPPKEDFRRPPEEDWRRPPEGDFRRPPEEDWRRLPEEDFRRLPPGEWRRPPEEGFRRPHEEDFRRLPEEDFQRPPEEDFRRPHEEDFRHSPEEDFRRSPEEDFRRPPPEHFRRPPPEHFRRPPPEHFRRPPSEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPREEDFRHSLDEDFRGPPDEEFRHPPDEDFRSPQEDDFRCPSDEDFRRLPEEDLREAPEEDPRLPDNFRLPGEELRSPPDDFRGHRPFVNFGRPEGGKFDFGKRNMGSFPEGRFMPDPKLNCNSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPESVSIQYNDQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(4111693..4114680)
location: region:4111693-4114680:-1
so has part: feature:4111693-4114680:-1:exon

XP_031295173.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4111693-4114680:-1:exon

RBM12B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RBM12B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding protein 12B
translation: MAVVIRLLGLPFIAGPVDIRHFFTGLTIPDGGVHIIGGEVGEAFIIFATDEDARRAISRSGGLIKDSSVELFLSSKAEMQKTIEMKRTDRMGRERPGSGASGVGSLSNFVEAVKEEASNSGYGSPINQDAGFHTNGTGHGDLRPRKTRPLKAENPYLFLRGLPYLVNEDDVRVFFSGLCVDGVIFLKHHDGRNNGDAIVKFASCIDASGGLKCHRSFMGSRFIEVMQGSEQQWIEFGGNAIKEGDIPMRTEEHSPPRGINDRHFWKRSHSKSPRRTRSRSPLGFYVHLKNLSLSINKRDLRNFFRDTDLTNEQIRFLYKDERRTRYAFVMFKTLKDYNTALGLHKTVLQYRPVHVDPVSRKQMLKFIECYEKKRPASAEKERLGHVSQKHSQEGYSGQKLCIYIRNFPFDVTKVEVQKFFADFNLAEDDIYLLYDDKGVGLGEALVKFKSEEQAMKAERLNRRRFLGTEVLLRLISEVQMQEFGVNFSSMSSERMHDHTQSCDRDDYPHLFDSDDLPVYSAGPSENFRHQQEDLRQLDNFKHLQGDFRPPDRRPPEDFRHSPEDFRRSPEDFRHLREEHFRGPPEEDLRRPWEEEDFRYPREEDWRRPPEDDFRRPPKEDFRRPPEEDWRRPPEGDFRRPPEEDWRRLPEEDFRRLPPGEWRRPPEEGFRRPHEEDFRRLPEEDFQRPPEEDFRRPHEEDFRHSPEEDFRRSPEEDFRRPPPEHFRRPPPEHFRRPPPEHFRRPPSEHFRRPPPEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPPQEHFRRPREEDFRHSLDEDFRGPPDEEFRHPPDEDFRSPQEDDFRCPSDEDFRRLPEEDLREAPEEDPRLPDNFRLPGEELRSPPDDFRGHRPFVNFGRPEGGKFDFGKRNMGSFPEGRFMPDPKLNCNSGRVTPIKIMNLPFKANVNEILDFFHGYRIIPESVSIQYNDQGLPTGEAIVAMINYNEAMAAIKDLNDRPVGPRKVKLILL
SIO_010081: RBM12B
subclass of: SO_0000673
so part of: RBM12B
location: complement(4111693..4114680)
location: region:4111693-4114680:-1
so has part: feature:4111693-4114680:-1:exon

XP_031295175.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4111693-4114680:-1:exon

TMEM67
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TMEM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4141817..4175943
location: region:4141817-4175943:1
so has part: feature:4141817-4175943:1:exon
subclass of: SO_0000010

105085732
type: Gene
SIO_000068: ncbigene

position:4141817:1
position: 4141817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4175943:1
position: 4175943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4141817-4175943:1:exon

TMEM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM67
product: transmembrane protein 67, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031439318.1
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141817..4141882,4141970..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4160626..4160712,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171632..4171748,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4175943)
location: region:4141817-4175943:1
so has part: feature:4141817-4141882:1:exon
so has part: feature:4141970-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4160626-4160712:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171632-4171748:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4175943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4141817-4141882:1:exon

position:4141882:1
position: 4141882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4141970-4142043:1:exon

position:4141970:1
position: 4141970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4142043:1
position: 4142043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4147311-4147373:1:exon

position:4147311:1
position: 4147311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4147373:1
position: 4147373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4148852-4149006:1:exon

position:4148852:1
position: 4148852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4149006:1
position: 4149006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4149113-4149221:1:exon

position:4149113:1
position: 4149113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4149221:1
position: 4149221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4150074-4150160:1:exon

position:4150074:1
position: 4150074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4150160:1
position: 4150160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4150469-4150534:1:exon

position:4150469:1
position: 4150469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4150534:1
position: 4150534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4152252-4152408:1:exon

position:4152252:1
position: 4152252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4152408:1
position: 4152408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4152989-4153112:1:exon

position:4152989:1
position: 4152989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4153112:1
position: 4153112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4154402-4154507:1:exon

position:4154402:1
position: 4154402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4154507:1
position: 4154507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4157334-4157390:1:exon

position:4157334:1
position: 4157334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4157390:1
position: 4157390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4158409-4158507:1:exon

position:4158409:1
position: 4158409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4158507:1
position: 4158507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4160276-4160374:1:exon

position:4160276:1
position: 4160276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4160374:1
position: 4160374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4160626-4160712:1:exon

position:4160626:1
position: 4160626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4160712:1
position: 4160712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4161708-4161807:1:exon

position:4161708:1
position: 4161708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4161807:1
position: 4161807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4161902-4162041:1:exon

position:4161902:1
position: 4161902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4162041:1
position: 4162041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4163447-4163587:1:exon

position:4163447:1
position: 4163447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4163587:1
position: 4163587
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4167984-4168064:1:exon

position:4167984:1
position: 4167984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4168064:1
position: 4168064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4168554-4168670:1:exon

position:4168554:1
position: 4168554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4168670:1
position: 4168670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4171632-4171748:1:exon

position:4171632:1
position: 4171632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4171748:1
position: 4171748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4171855-4171959:1:exon

position:4171855:1
position: 4171855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4171959:1
position: 4171959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4172511-4172613:1:exon

position:4172511:1
position: 4172511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4172613:1
position: 4172613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4173669-4173811:1:exon

position:4173669:1
position: 4173669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4173811:1
position: 4173811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4174749-4175943:1:exon

position:4174749:1
position: 4174749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM67
product: transmembrane protein 67, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031439322.1
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141817..4141882,4141970..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4160626..4160712,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4175943)
location: region:4141817-4175943:1
so has part: feature:4141817-4141882:1:exon
so has part: feature:4141970-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4160626-4160712:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4175943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4141817-4141882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4141970-4142043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4147311-4147373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4148852-4149006:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4149113-4149221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150074-4150160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4150469-4150534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152252-4152408:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4152989-4153112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4154402-4154507:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4157334-4157390:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4158409-4158507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4160276-4160374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4160626-4160712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4161708-4161807:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4161902-4162041:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4163447-4163587:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4167984-4168064:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4168554-4168670:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4171855-4171959:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4172511-4172613:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4173669-4173811:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4174749-4175943:1:exon

TMEM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM67
product: transmembrane protein 67, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031439320.1
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141817..4141882,4141970..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171632..4171748,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4175943)
location: region:4141817-4175943:1
so has part: feature:4141817-4141882:1:exon
so has part: feature:4141970-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171632-4171748:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4175943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4141817-4141882:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4141970-4142043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4147311-4147373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4148852-4149006:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4149113-4149221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150074-4150160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4150469-4150534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152252-4152408:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4152989-4153112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4154402-4154507:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4157334-4157390:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4158409-4158507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4160276-4160374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4161708-4161807:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4161902-4162041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4163447-4163587:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4167984-4168064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168554-4168670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4171632-4171748:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4171855-4171959:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4172511-4172613:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4173669-4173811:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4174749-4175943:1:exon

TMEM67
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TMEM67
product: transmembrane protein 67, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031439319.1
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141830..4141851,4141970..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4160626..4160712,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171632..4171748,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4175943)
location: region:4141830-4175943:1
so has part: feature:4141830-4141851:1:exon
so has part: feature:4141970-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4160626-4160712:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171632-4171748:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4175943:1:exon

position:4141830:1
position: 4141830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4141830-4141851:1:exon

position:4141851:1
position: 4141851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4141970-4142043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4147311-4147373:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4148852-4149006:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4149113-4149221:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150074-4150160:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4150469-4150534:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152252-4152408:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4152989-4153112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4154402-4154507:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4157334-4157390:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4158409-4158507:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4160276-4160374:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4160626-4160712:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4161708-4161807:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4161902-4162041:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4163447-4163587:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4167984-4168064:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4168554-4168670:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4171632-4171748:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4171855-4171959:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4172511-4172613:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4173669-4173811:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4174749-4175943:1:exon

TMEM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meckelin isoform X1
translation: MFQQHRNFPPRMTSAARYGELGVSLTSEWFAKYLQSSAAACWVYANLTSCQALGNMCVMNMNSYESSTFDACRLFQFIFENTAGLRTVHSFSFWRQNLPWLFYGDQLGLAPQVLSTTPLPTNFSFKGQNQNTKLKFVAASYDVRGNFLKWQTLEGGVLQLCPDTETRLNAAYSFGTTYQQSCEIPVSKLLTDFPTPIFYDVYLEYTDENQHRYIWAVPVLNLNLQHNKIFVNQDSSSGKWLLTRRIFLVDTLSGRENDLESQPRLVRVATQISLSIHLVPNTKNGNIYPPLITIAYSDVDVRDPTSQSVEVSFSVRYEMDQGEAHVQTDIALGVLGGLAVLSSLLKTAGWKRRVGSPMIDLQTVVKFLVYYAGDLANVFFIITVGTGLYWLIFFKAQKSVSVLLPVPAQEERFVTFVGCAFALKALQFLHKLISQITIDIFFIDWERPKGKVLKAVEGEGGVRNATVPVSIWRTYFVANEWNEIQTVRKINPLFQVLTVLFFLEVVGFKNLALMDSSSSLSRSQSSYIAPYSRILRYAVSAAAWLVIALMQIVFFVVFYERFIEDKIRQFVDLCCMSNISVFLLSHKCFGYYIHGRSVHGHADTNMEEMNMNLKREAENLCSQRGLVPNTDGQTFQIAVSSQMRQHYDRIHETLTRRNGPARLLSSPASTFEQSIKAYHTMNKFLASFIDHVHKEMDYFIKDKLLLERILGMEFMEPMEKSIFYNDEGYSFSSVLYYGNEATLLIYDLLFFCVVDLACQNFILAACLTYLQQEIFRFIRNTVGQKNLASKTLVDQRFLI
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141981..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4160626..4160712,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171632..4171748,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4174829)
location: region:4141981-4174829:1
so has part: feature:4141981-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4160626-4160712:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171632-4171748:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4174829:1:exon

XP_031295178.1
type: Protein
SIO_000068: ncbiprotein

position:4141981:1
position: 4141981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4174829:1
position: 4174829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4141981-4142043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4147311-4147373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148852-4149006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4149113-4149221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4150074-4150160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150469-4150534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4152252-4152408:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152989-4153112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4154402-4154507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4157334-4157390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4158409-4158507:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160276-4160374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4160626-4160712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4161708-4161807:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4161902-4162041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4163447-4163587:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4167984-4168064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168554-4168670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4171632-4171748:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4171855-4171959:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4172511-4172613:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4173669-4173811:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4174749-4174829:1:exon

TMEM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meckelin isoform X1
translation: MFQQHRNFPPRMTSAARYGELGVSLTSEWFAKYLQSSAAACWVYANLTSCQALGNMCVMNMNSYESSTFDACRLFQFIFENTAGLRTVHSFSFWRQNLPWLFYGDQLGLAPQVLSTTPLPTNFSFKGQNQNTKLKFVAASYDVRGNFLKWQTLEGGVLQLCPDTETRLNAAYSFGTTYQQSCEIPVSKLLTDFPTPIFYDVYLEYTDENQHRYIWAVPVLNLNLQHNKIFVNQDSSSGKWLLTRRIFLVDTLSGRENDLESQPRLVRVATQISLSIHLVPNTKNGNIYPPLITIAYSDVDVRDPTSQSVEVSFSVRYEMDQGEAHVQTDIALGVLGGLAVLSSLLKTAGWKRRVGSPMIDLQTVVKFLVYYAGDLANVFFIITVGTGLYWLIFFKAQKSVSVLLPVPAQEERFVTFVGCAFALKALQFLHKLISQITIDIFFIDWERPKGKVLKAVEGEGGVRNATVPVSIWRTYFVANEWNEIQTVRKINPLFQVLTVLFFLEVVGFKNLALMDSSSSLSRSQSSYIAPYSRILRYAVSAAAWLVIALMQIVFFVVFYERFIEDKIRQFVDLCCMSNISVFLLSHKCFGYYIHGRSVHGHADTNMEEMNMNLKREAENLCSQRGLVPNTDGQTFQIAVSSQMRQHYDRIHETLTRRNGPARLLSSPASTFEQSIKAYHTMNKFLASFIDHVHKEMDYFIKDKLLLERILGMEFMEPMEKSIFYNDEGYSFSSVLYYGNEATLLIYDLLFFCVVDLACQNFILAACLTYLQQEIFRFIRNTVGQKNLASKTLVDQRFLI
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141981..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4160626..4160712,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171632..4171748,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4174829)
location: region:4141981-4174829:1
so has part: feature:4141981-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4160626-4160712:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171632-4171748:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4174829:1:exon

XP_031295179.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4141981-4142043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4147311-4147373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148852-4149006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4149113-4149221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4150074-4150160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150469-4150534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4152252-4152408:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152989-4153112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4154402-4154507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4157334-4157390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4158409-4158507:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160276-4160374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4160626-4160712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4161708-4161807:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4161902-4162041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4163447-4163587:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4167984-4168064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168554-4168670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4171632-4171748:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4171855-4171959:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4172511-4172613:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4173669-4173811:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4174749-4174829:1:exon

TMEM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meckelin isoform X3
translation: MFQQHRNFPPRMTSAARYGELGVSLTSEWFAKYLQSSAAACWVYANLTSCQALGNMCVMNMNSYESSTFDACRLFQFIFENTAGLRTVHSFSFWRQNLPWLFYGDQLGLAPQVLSTTPLPTNFSFKGQNQNTKLKFVAASYDVRGNFLKWQTLEGGVLQLCPDTETRLNAAYSFGTTYQQSCEIPVSKLLTDFPTPIFYDVYLEYTDENQHRYIWAVPVLNLNLQHNKIFVNQDSSSGKWLLTRRIFLVDTLSGRENDLESQPRLVRVATQISLSIHLVPNTKNGNIYPPLITIAYSDVDVRDPTSQSVEVSFSVRYEMDQGEAHVQTDIALGVLGGLAVLSSLLKTAGWKRRVGSPMIDLQTVVKFLVYYAGDLANVFFIITVGTGLYWLIFFKAQKSVSVLLPVPAQEERFVTFVGCAFALKALQFLHKLISQITIDIFFIDWERPKGKVLKAVEGEGGVRNATVPVSIWRTYFVANEWNEIQTVRKINPLFQVLTVLFFLEVVGFKNLALMDSSSSLSRSQSSYIAPYSRILRYAVSAAAWLVIALMQIVFFVVFYERFIEDKIRQFVDLCCMSNISVFLLSHKCFGYYIHGRSVHGHADTNMEEMNMNLKREARNGPARLLSSPASTFEQSIKAYHTMNKFLASFIDHVHKEMDYFIKDKLLLERILGMEFMEPMEKSIFYNDEGYSFSSVLYYGNEATLLIYDLLFFCVVDLACQNFILAACLTYLQQEIFRFIRNTVGQKNLASKTLVDQRFLI
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141981..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4160626..4160712,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4174829)
location: region:4141981-4174829:1
so has part: feature:4141981-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4160626-4160712:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4174829:1:exon

XP_031295182.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4141981-4142043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4147311-4147373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148852-4149006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4149113-4149221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4150074-4150160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150469-4150534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4152252-4152408:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152989-4153112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4154402-4154507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4157334-4157390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4158409-4158507:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160276-4160374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4160626-4160712:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4161708-4161807:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4161902-4162041:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4163447-4163587:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4167984-4168064:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4168554-4168670:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4171855-4171959:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4172511-4172613:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4173669-4173811:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4174749-4174829:1:exon

TMEM67
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TMEM67
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: meckelin isoform X2
translation: MFQQHRNFPPRMTSAARYGELGVSLTSEWFAKYLQSSAAACWVYANLTSCQALGNMCVMNMNSYESSTFDACRLFQFIFENTAGLRTVHSFSFWRQNLPWLFYGDQLGLAPQVLSTTPLPTNFSFKGQNQNTKLKFVAASYDVRGNFLKWQTLEGGVLQLCPDTETRLNAAYSFGTTYQQSCEIPVSKLLTDFPTPIFYDVYLEYTDENQHRYIWAVPVLNLNLQHNKIFVNQDSSSGKWLLTRRIFLVDTLSGRENDLESQPRLVRVATQISLSIHLVPNTKNGNIYPPLITIAYSDVDVRDPTSQSVEVSFSVRYEMDQGEAHVQTDIALGVLGGLAVLSSLLKTAGWKRRVGSPMIDLQTVVKFLVYYAGDLANVFFIITVGTGLYWLIFFKALQFLHKLISQITIDIFFIDWERPKGKVLKAVEGEGGVRNATVPVSIWRTYFVANEWNEIQTVRKINPLFQVLTVLFFLEVVGFKNLALMDSSSSLSRSQSSYIAPYSRILRYAVSAAAWLVIALMQIVFFVVFYERFIEDKIRQFVDLCCMSNISVFLLSHKCFGYYIHGRSVHGHADTNMEEMNMNLKREAENLCSQRGLVPNTDGQTFQIAVSSQMRQHYDRIHETLTRRNGPARLLSSPASTFEQSIKAYHTMNKFLASFIDHVHKEMDYFIKDKLLLERILGMEFMEPMEKSIFYNDEGYSFSSVLYYGNEATLLIYDLLFFCVVDLACQNFILAACLTYLQQEIFRFIRNTVGQKNLASKTLVDQRFLI
SIO_010081: TMEM67
subclass of: SO_0000673
so part of: TMEM67
location: join(4141981..4142043,4147311..4147373,4148852..4149006,4149113..4149221,4150074..4150160,4150469..4150534,4152252..4152408,4152989..4153112,4154402..4154507,4157334..4157390,4158409..4158507,4160276..4160374,4161708..4161807,4161902..4162041,4163447..4163587,4167984..4168064,4168554..4168670,4171632..4171748,4171855..4171959,4172511..4172613,4173669..4173811,4174749..4174829)
location: region:4141981-4174829:1
so has part: feature:4141981-4142043:1:exon
so has part: feature:4147311-4147373:1:exon
so has part: feature:4148852-4149006:1:exon
so has part: feature:4149113-4149221:1:exon
so has part: feature:4150074-4150160:1:exon
so has part: feature:4150469-4150534:1:exon
so has part: feature:4152252-4152408:1:exon
so has part: feature:4152989-4153112:1:exon
so has part: feature:4154402-4154507:1:exon
so has part: feature:4157334-4157390:1:exon
so has part: feature:4158409-4158507:1:exon
so has part: feature:4160276-4160374:1:exon
so has part: feature:4161708-4161807:1:exon
so has part: feature:4161902-4162041:1:exon
so has part: feature:4163447-4163587:1:exon
so has part: feature:4167984-4168064:1:exon
so has part: feature:4168554-4168670:1:exon
so has part: feature:4171632-4171748:1:exon
so has part: feature:4171855-4171959:1:exon
so has part: feature:4172511-4172613:1:exon
so has part: feature:4173669-4173811:1:exon
so has part: feature:4174749-4174829:1:exon

XP_031295180.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4141981-4142043:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4147311-4147373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4148852-4149006:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4149113-4149221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4150074-4150160:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4150469-4150534:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4152252-4152408:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4152989-4153112:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4154402-4154507:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4157334-4157390:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4158409-4158507:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4160276-4160374:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4161708-4161807:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4161902-4162041:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4163447-4163587:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4167984-4168064:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4168554-4168670:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4171632-4171748:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4171855-4171959:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4172511-4172613:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4173669-4173811:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4174749-4174829:1:exon

LOC116149018
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4166046..4166562)
location: region:4166046-4166562:-1
so has part: feature:4166046-4166562:-1:exon

116149018
type: Gene
SIO_000068: ncbigene

position:4166046:-1
position: 4166046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4166562:-1
position: 4166562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4166046-4166562:-1:exon

LOC116149018
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116149018
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116149018
subclass of: SO_0000673
so part of: LOC116149018
location: complement(4166046..4166562)
location: region:4166046-4166562:-1
so has part: feature:4166046-4166562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4166046-4166562:-1:exon

TRNAE-UUC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAE-UUC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 4191322..4191393
location: region:4191322-4191393:1
so has part: feature:4191322-4191393:1:exon
subclass of: SO_0000663

116149070
type: Gene
SIO_000068: ncbigene

position:4191322:1
position: 4191322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4191393:1
position: 4191393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4191322-4191393:1:exon

TRNAE-UUC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAE-UUC
product: tRNA-Glu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glutamic acid (anticodon UUC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:4191354..4191356,aa:Glu,seq:ttc)
SIO_010081: TRNAE-UUC
subclass of: SO_0000673
so part of: TRNAE-UUC
location: 4191322..4191393
location: region:4191322-4191393:1
so has part: feature:4191322-4191393:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4191322-4191393:1:exon

LOC116148892
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4217378..4219832
location: region:4217378-4219832:1
so has part: feature:4217378-4219832:1:exon
subclass of: SO_0000011

116148892
type: Gene
SIO_000068: ncbigene

position:4217378:1
position: 4217378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4219832:1
position: 4219832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4217378-4219832:1:exon

LOC116148892
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148892
product: uncharacterized LOC116148892
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132467.1
SIO_010081: LOC116148892
subclass of: SO_0000673
so part of: LOC116148892
location: join(4217378..4217516,4219321..4219443,4219750..4219832)
location: region:4217378-4219832:1
so has part: feature:4217378-4217516:1:exon
so has part: feature:4219321-4219443:1:exon
so has part: feature:4219750-4219832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4217378-4217516:1:exon

position:4217516:1
position: 4217516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4219321-4219443:1:exon

position:4219321:1
position: 4219321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4219443:1
position: 4219443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4219750-4219832:1:exon

position:4219750:1
position: 4219750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4225883..4234576
location: region:4225883-4234576:1
so has part: feature:4225883-4234576:1:exon
subclass of: SO_0000010

105085733
type: Gene
SIO_000068: ncbigene

position:4225883:1
position: 4225883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4234576:1
position: 4234576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4225883-4234576:1:exon

PDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PDP1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031439324.1
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: join(4225883..4226051,4226793..4226827,4230204..4230298,4230496..4234576)
location: region:4225883-4234576:1
so has part: feature:4225883-4226051:1:exon
so has part: feature:4226793-4226827:1:exon
so has part: feature:4230204-4230298:1:exon
so has part: feature:4230496-4234576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4225883-4226051:1:exon

position:4226051:1
position: 4226051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4226793-4226827:1:exon

position:4226793:1
position: 4226793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4226827:1
position: 4226827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4230204-4230298:1:exon

position:4230204:1
position: 4230204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4230298:1
position: 4230298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4230496-4234576:1:exon

position:4230496:1
position: 4230496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PDP1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_031439326.1
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: join(4225883..4226051,4230496..4234576)
location: region:4225883-4234576:1
so has part: feature:4225883-4226051:1:exon
so has part: feature:4230496-4234576:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4225883-4226051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4230496-4234576:1:exon

PDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PDP1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031439323.1
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: join(4225921..4226051,4226793..4226827,4230496..4234576)
location: region:4225921-4234576:1
so has part: feature:4225921-4226051:1:exon
so has part: feature:4226793-4226827:1:exon
so has part: feature:4230496-4234576:1:exon

position:4225921:1
position: 4225921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4225921-4226051:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4226793-4226827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4230496-4234576:1:exon

PDP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PDP1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_010976006.2
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: join(4226197..4226548,4226793..4226827,4230496..4234576)
location: region:4226197-4234576:1
so has part: feature:4226197-4226548:1:exon
so has part: feature:4226793-4226827:1:exon
so has part: feature:4230496-4234576:1:exon

position:4226197:1
position: 4226197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4226197-4226548:1:exon

position:4226548:1
position: 4226548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4226793-4226827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4230496-4234576:1:exon

PDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X1
translation: MDWPAAGRASAGVWAPAASGCGSVSPAGRMCVCPGPRRIGIPVRSSSLPLFSDAMPAPTQLFFPLIRNCELSRIYGTACYCHHKHLCCSPPYIPQSRLRYTPHPAYATFYRPKDSWWQYTQGRRYASTPQKFYLTPPQVNSILKANEYSFKVPEFDGKNVSSVLGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEHLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVGACQNQE
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: join(4226466..4226548,4226793..4226827,4230496..4232153)
location: region:4226466-4232153:1
so has part: feature:4226466-4226548:1:exon
so has part: feature:4226793-4226827:1:exon
so has part: feature:4230496-4232153:1:exon

XP_010974308.2
type: Protein
SIO_000068: ncbiprotein

position:4226466:1
position: 4226466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4232153:1
position: 4232153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4226466-4226548:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4226793-4226827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4230496-4232153:1:exon

PDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X2
translation: MCVCPGPRRIGIPVRSSSLPLFSDAMPAPTQLFFPLIRNCELSRIYGTACYCHHKHLCCSPPYIPQSRLRYTPHPAYATFYRPKDSWWQYTQGRRYASTPQKFYLTPPQVNSILKANEYSFKVPEFDGKNVSSVLGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEHLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVGACQNQE
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: join(4226797..4226827,4230496..4232153)
location: region:4226797-4232153:1
so has part: feature:4226797-4226827:1:exon
so has part: feature:4230496-4232153:1:exon

XP_031295183.1
type: Protein
SIO_000068: ncbiprotein

position:4226797:1
position: 4226797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4226797-4226827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4230496-4232153:1:exon

PDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
translation: MPAPTQLFFPLIRNCELSRIYGTACYCHHKHLCCSPPYIPQSRLRYTPHPAYATFYRPKDSWWQYTQGRRYASTPQKFYLTPPQVNSILKANEYSFKVPEFDGKNVSSVLGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEHLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVGACQNQE
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: 4230540..4232153
location: region:4230540-4232153:1
so has part: feature:4230540-4232153:1:exon

XP_031295184.1
type: Protein
SIO_000068: ncbiprotein

position:4230540:1
position: 4230540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4230540-4232153:1:exon

PDP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PDP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pyruvate dehyrogenase phosphatase catalytic subunit 1 isoform X3
translation: MPAPTQLFFPLIRNCELSRIYGTACYCHHKHLCCSPPYIPQSRLRYTPHPAYATFYRPKDSWWQYTQGRRYASTPQKFYLTPPQVNSILKANEYSFKVPEFDGKNVSSVLGFDSNQLPANAPIEDRRSAATCLQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRALLPILQWHKHPNDYFSKEASKLYFNSLRTYWQELIDLNTGESTDIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTLSNDHNAQNEREVERLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYYTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEHLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNSHVVGACQNQE
SIO_010081: PDP1
subclass of: SO_0000673
so part of: PDP1
location: 4230540..4232153
location: region:4230540-4232153:1
so has part: feature:4230540-4232153:1:exon

XP_031295186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4230540-4232153:1:exon

CDH17
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CDH17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4370674..4461920)
location: region:4370674-4461920:-1
so has part: feature:4370674-4461920:-1:exon
subclass of: SO_0000010

105085734
type: Gene
SIO_000068: ncbigene

position:4370674:-1
position: 4370674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4461920:-1
position: 4461920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4370674-4461920:-1:exon

CDH17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CDH17
product: cadherin 17, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_010976007.2
SIO_010081: CDH17
subclass of: SO_0000673
so part of: CDH17
location: complement(join(4370674..4371695,4373660..4373773,4373910..4374026,4379268..4379507,4382234..4382364,4385515..4385759,4393542..4393733,4395707..4395783,4399633..4399848,4403750..4403900,4404256..4404387,4407169..4407368,4407481..4407639,4408642..4408780,4409673..4409807,4415353..4415451,4420554..4420624,4461770..4461920))
location: region:4370674-4461920:-1
so has part: feature:4461770-4461920:-1:exon
so has part: feature:4420554-4420624:-1:exon
so has part: feature:4415353-4415451:-1:exon
so has part: feature:4409673-4409807:-1:exon
so has part: feature:4408642-4408780:-1:exon
so has part: feature:4407481-4407639:-1:exon
so has part: feature:4407169-4407368:-1:exon
so has part: feature:4404256-4404387:-1:exon
so has part: feature:4403750-4403900:-1:exon
so has part: feature:4399633-4399848:-1:exon
so has part: feature:4395707-4395783:-1:exon
so has part: feature:4393542-4393733:-1:exon
so has part: feature:4385515-4385759:-1:exon
so has part: feature:4382234-4382364:-1:exon
so has part: feature:4379268-4379507:-1:exon
so has part: feature:4373910-4374026:-1:exon
so has part: feature:4373660-4373773:-1:exon
so has part: feature:4370674-4371695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4461770-4461920:-1:exon

position:4461770:-1
position: 4461770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4420554-4420624:-1:exon

position:4420554:-1
position: 4420554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4420624:-1
position: 4420624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4415353-4415451:-1:exon

position:4415353:-1
position: 4415353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4415451:-1
position: 4415451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4409673-4409807:-1:exon

position:4409673:-1
position: 4409673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4409807:-1
position: 4409807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4408642-4408780:-1:exon

position:4408642:-1
position: 4408642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4408780:-1
position: 4408780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4407481-4407639:-1:exon

position:4407481:-1
position: 4407481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4407639:-1
position: 4407639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4407169-4407368:-1:exon

position:4407169:-1
position: 4407169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4407368:-1
position: 4407368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4404256-4404387:-1:exon

position:4404256:-1
position: 4404256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4404387:-1
position: 4404387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4403750-4403900:-1:exon

position:4403750:-1
position: 4403750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4403900:-1
position: 4403900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4399633-4399848:-1:exon

position:4399633:-1
position: 4399633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4399848:-1
position: 4399848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4395707-4395783:-1:exon

position:4395707:-1
position: 4395707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4395783:-1
position: 4395783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4393542-4393733:-1:exon

position:4393542:-1
position: 4393542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4393733:-1
position: 4393733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4385515-4385759:-1:exon

position:4385515:-1
position: 4385515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4385759:-1
position: 4385759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4382234-4382364:-1:exon

position:4382234:-1
position: 4382234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4382364:-1
position: 4382364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4379268-4379507:-1:exon

position:4379268:-1
position: 4379268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4379507:-1
position: 4379507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4373910-4374026:-1:exon

position:4373910:-1
position: 4373910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4374026:-1
position: 4374026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4373660-4373773:-1:exon

position:4373660:-1
position: 4373660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4373773:-1
position: 4373773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4370674-4371695:-1:exon

position:4371695:-1
position: 4371695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDH17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CDH17
product: cadherin 17, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031439328.1
SIO_010081: CDH17
subclass of: SO_0000673
so part of: CDH17
location: complement(join(4370674..4371695,4373660..4373773,4373910..4374026,4379268..4379507,4382234..4382364,4385515..4385759,4393542..4393733,4395707..4395783,4399633..4399848,4403750..4403900,4404256..4404387,4407169..4407368,4407481..4407639,4408642..4408780,4409673..4409807,4415353..4415451,4420554..4420624,4441737..4441941,4461770..4461920))
location: region:4370674-4461920:-1
so has part: feature:4461770-4461920:-1:exon
so has part: feature:4441737-4441941:-1:exon
so has part: feature:4420554-4420624:-1:exon
so has part: feature:4415353-4415451:-1:exon
so has part: feature:4409673-4409807:-1:exon
so has part: feature:4408642-4408780:-1:exon
so has part: feature:4407481-4407639:-1:exon
so has part: feature:4407169-4407368:-1:exon
so has part: feature:4404256-4404387:-1:exon
so has part: feature:4403750-4403900:-1:exon
so has part: feature:4399633-4399848:-1:exon
so has part: feature:4395707-4395783:-1:exon
so has part: feature:4393542-4393733:-1:exon
so has part: feature:4385515-4385759:-1:exon
so has part: feature:4382234-4382364:-1:exon
so has part: feature:4379268-4379507:-1:exon
so has part: feature:4373910-4374026:-1:exon
so has part: feature:4373660-4373773:-1:exon
so has part: feature:4370674-4371695:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4461770-4461920:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4441737-4441941:-1:exon

position:4441737:-1
position: 4441737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4441941:-1
position: 4441941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4420554-4420624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4415353-4415451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4409673-4409807:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4408642-4408780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4407481-4407639:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4407169-4407368:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4404256-4404387:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4403750-4403900:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4399633-4399848:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4395707-4395783:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4393542-4393733:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4385515-4385759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4382234-4382364:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4379268-4379507:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4373910-4374026:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4373660-4373773:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4370674-4371695:-1:exon

CDH17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CDH17
product: cadherin 17, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031439327.1
SIO_010081: CDH17
subclass of: SO_0000673
so part of: CDH17
location: complement(join(4370674..4371695,4373660..4373773,4373910..4374026,4379268..4379507,4382234..4382364,4385515..4385759,4393542..4393733,4395707..4395783,4399633..4399848,4403750..4403900,4404256..4404387,4407169..4407368,4407481..4407639,4408642..4408780,4409673..4409807,4415353..4415451,4420554..4420624,4430441..4430569))
location: region:4370674-4430569:-1
so has part: feature:4430441-4430569:-1:exon
so has part: feature:4420554-4420624:-1:exon
so has part: feature:4415353-4415451:-1:exon
so has part: feature:4409673-4409807:-1:exon
so has part: feature:4408642-4408780:-1:exon
so has part: feature:4407481-4407639:-1:exon
so has part: feature:4407169-4407368:-1:exon
so has part: feature:4404256-4404387:-1:exon
so has part: feature:4403750-4403900:-1:exon
so has part: feature:4399633-4399848:-1:exon
so has part: feature:4395707-4395783:-1:exon
so has part: feature:4393542-4393733:-1:exon
so has part: feature:4385515-4385759:-1:exon
so has part: feature:4382234-4382364:-1:exon
so has part: feature:4379268-4379507:-1:exon
so has part: feature:4373910-4374026:-1:exon
so has part: feature:4373660-4373773:-1:exon
so has part: feature:4370674-4371695:-1:exon

position:4430569:-1
position: 4430569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4430441-4430569:-1:exon

position:4430441:-1
position: 4430441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4420554-4420624:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4415353-4415451:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4409673-4409807:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4408642-4408780:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4407481-4407639:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4407169-4407368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4404256-4404387:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4403750-4403900:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4399633-4399848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4395707-4395783:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4393542-4393733:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4385515-4385759:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4382234-4382364:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4379268-4379507:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4373910-4374026:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4373660-4373773:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4370674-4371695:-1:exon

CDH17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CDH17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-17
translation: MTTRARLLGVCLLALYLTTGYGQEGKFSGPLKPMTFSVFEGQEPSQIIFQFKADPPAVTFKLTGETDGIFQIQPDGLLYHNRSLDRETRAVHRLQVSALDAQGNTVEGPVPITIEVKDINDNRPMFVQPNYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLVYEIIMQLPRVNDVMYFQINNKTGAISLTLEGSRELDPVKNPSYNLVVSVKDMGGQNDHSFSDSTSVNIMVKENIWKAPEPVEIAENSTSPLPIKITQVQWNEPGAHYSLEVKEKPPTFPFSIDQEGYIYVTQPLDREETDTYVFYAVAKDEYGKPLAFPLRISVKVKDVNDNPPACPSALTVFEVQENEQIGSSIGTFTAHDMDEENTVNSLLGYRLVDQTPTVPRDGLFLVEAYLGTVKLAEQSLRKRDAPQYNLTVEVSDKDFKTFCHVQVNIIDINDQIPIFEKSDYGNLSLAEDTAVGSTILTIQATDADEPHTGSSKILYRVTQGDSEGCLEIDTDPQTNAGYVKVKKPLDFETVHIHNIVFQAENPEPLVPGVQYNASSAATFRLIVTDVDEAPQFLQQVFQAKVSENVARDTKVGNVTAKDPEGLDISYSLRGDKRGWLKIDPVTGEIFSVAPLDREAESLYQVQVVATEVGGSSLSSTAQFHLTLMDVNDSPPRLVKEYTGLFFCHPPKAPGSLIFEVTDDDQQSFLGPRFRFALGSESLQSDWEVSGINGTHARLSTKHTNFEERVYYIPIRISDSGRPPLEGTVSLPVTFCKCVEETCFKPAGHLPGIPPVGLAVGILLTTFLVIGIILAVVFIRMKRNKGQNNAGSARASEVKPLRS
SIO_010081: CDH17
subclass of: SO_0000673
so part of: CDH17
location: complement(join(4371595..4371695,4373660..4373773,4373910..4374026,4379268..4379507,4382234..4382364,4385515..4385759,4393542..4393733,4395707..4395783,4399633..4399848,4403750..4403900,4404256..4404387,4407169..4407368,4407481..4407639,4408642..4408780,4409673..4409807,4415353..4415451,4420554..4420604))
location: region:4371595-4420604:-1
so has part: feature:4420554-4420604:-1:exon
so has part: feature:4415353-4415451:-1:exon
so has part: feature:4409673-4409807:-1:exon
so has part: feature:4408642-4408780:-1:exon
so has part: feature:4407481-4407639:-1:exon
so has part: feature:4407169-4407368:-1:exon
so has part: feature:4404256-4404387:-1:exon
so has part: feature:4403750-4403900:-1:exon
so has part: feature:4399633-4399848:-1:exon
so has part: feature:4395707-4395783:-1:exon
so has part: feature:4393542-4393733:-1:exon
so has part: feature:4385515-4385759:-1:exon
so has part: feature:4382234-4382364:-1:exon
so has part: feature:4379268-4379507:-1:exon
so has part: feature:4373910-4374026:-1:exon
so has part: feature:4373660-4373773:-1:exon
so has part: feature:4371595-4371695:-1:exon

XP_031295187.1
type: Protein
SIO_000068: ncbiprotein

position:4371595:-1
position: 4371595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4420604:-1
position: 4420604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4420554-4420604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4415353-4415451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4409673-4409807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408642-4408780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4407481-4407639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4407169-4407368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4404256-4404387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4403750-4403900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4399633-4399848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4395707-4395783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4393542-4393733:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385515-4385759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4382234-4382364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4379268-4379507:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4373910-4374026:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4373660-4373773:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371595-4371695:-1:exon

CDH17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CDH17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-17
translation: MTTRARLLGVCLLALYLTTGYGQEGKFSGPLKPMTFSVFEGQEPSQIIFQFKADPPAVTFKLTGETDGIFQIQPDGLLYHNRSLDRETRAVHRLQVSALDAQGNTVEGPVPITIEVKDINDNRPMFVQPNYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLVYEIIMQLPRVNDVMYFQINNKTGAISLTLEGSRELDPVKNPSYNLVVSVKDMGGQNDHSFSDSTSVNIMVKENIWKAPEPVEIAENSTSPLPIKITQVQWNEPGAHYSLEVKEKPPTFPFSIDQEGYIYVTQPLDREETDTYVFYAVAKDEYGKPLAFPLRISVKVKDVNDNPPACPSALTVFEVQENEQIGSSIGTFTAHDMDEENTVNSLLGYRLVDQTPTVPRDGLFLVEAYLGTVKLAEQSLRKRDAPQYNLTVEVSDKDFKTFCHVQVNIIDINDQIPIFEKSDYGNLSLAEDTAVGSTILTIQATDADEPHTGSSKILYRVTQGDSEGCLEIDTDPQTNAGYVKVKKPLDFETVHIHNIVFQAENPEPLVPGVQYNASSAATFRLIVTDVDEAPQFLQQVFQAKVSENVARDTKVGNVTAKDPEGLDISYSLRGDKRGWLKIDPVTGEIFSVAPLDREAESLYQVQVVATEVGGSSLSSTAQFHLTLMDVNDSPPRLVKEYTGLFFCHPPKAPGSLIFEVTDDDQQSFLGPRFRFALGSESLQSDWEVSGINGTHARLSTKHTNFEERVYYIPIRISDSGRPPLEGTVSLPVTFCKCVEETCFKPAGHLPGIPPVGLAVGILLTTFLVIGIILAVVFIRMKRNKGQNNAGSARASEVKPLRS
SIO_010081: CDH17
subclass of: SO_0000673
so part of: CDH17
location: complement(join(4371595..4371695,4373660..4373773,4373910..4374026,4379268..4379507,4382234..4382364,4385515..4385759,4393542..4393733,4395707..4395783,4399633..4399848,4403750..4403900,4404256..4404387,4407169..4407368,4407481..4407639,4408642..4408780,4409673..4409807,4415353..4415451,4420554..4420604))
location: region:4371595-4420604:-1
so has part: feature:4420554-4420604:-1:exon
so has part: feature:4415353-4415451:-1:exon
so has part: feature:4409673-4409807:-1:exon
so has part: feature:4408642-4408780:-1:exon
so has part: feature:4407481-4407639:-1:exon
so has part: feature:4407169-4407368:-1:exon
so has part: feature:4404256-4404387:-1:exon
so has part: feature:4403750-4403900:-1:exon
so has part: feature:4399633-4399848:-1:exon
so has part: feature:4395707-4395783:-1:exon
so has part: feature:4393542-4393733:-1:exon
so has part: feature:4385515-4385759:-1:exon
so has part: feature:4382234-4382364:-1:exon
so has part: feature:4379268-4379507:-1:exon
so has part: feature:4373910-4374026:-1:exon
so has part: feature:4373660-4373773:-1:exon
so has part: feature:4371595-4371695:-1:exon

XP_031295188.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4420554-4420604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4415353-4415451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4409673-4409807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408642-4408780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4407481-4407639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4407169-4407368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4404256-4404387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4403750-4403900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4399633-4399848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4395707-4395783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4393542-4393733:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385515-4385759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4382234-4382364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4379268-4379507:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4373910-4374026:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4373660-4373773:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371595-4371695:-1:exon

CDH17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CDH17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cadherin-17
translation: MTTRARLLGVCLLALYLTTGYGQEGKFSGPLKPMTFSVFEGQEPSQIIFQFKADPPAVTFKLTGETDGIFQIQPDGLLYHNRSLDRETRAVHRLQVSALDAQGNTVEGPVPITIEVKDINDNRPMFVQPNYEGSVRQNSRPGKPFMYVNATDLDDPATPNGQLVYEIIMQLPRVNDVMYFQINNKTGAISLTLEGSRELDPVKNPSYNLVVSVKDMGGQNDHSFSDSTSVNIMVKENIWKAPEPVEIAENSTSPLPIKITQVQWNEPGAHYSLEVKEKPPTFPFSIDQEGYIYVTQPLDREETDTYVFYAVAKDEYGKPLAFPLRISVKVKDVNDNPPACPSALTVFEVQENEQIGSSIGTFTAHDMDEENTVNSLLGYRLVDQTPTVPRDGLFLVEAYLGTVKLAEQSLRKRDAPQYNLTVEVSDKDFKTFCHVQVNIIDINDQIPIFEKSDYGNLSLAEDTAVGSTILTIQATDADEPHTGSSKILYRVTQGDSEGCLEIDTDPQTNAGYVKVKKPLDFETVHIHNIVFQAENPEPLVPGVQYNASSAATFRLIVTDVDEAPQFLQQVFQAKVSENVARDTKVGNVTAKDPEGLDISYSLRGDKRGWLKIDPVTGEIFSVAPLDREAESLYQVQVVATEVGGSSLSSTAQFHLTLMDVNDSPPRLVKEYTGLFFCHPPKAPGSLIFEVTDDDQQSFLGPRFRFALGSESLQSDWEVSGINGTHARLSTKHTNFEERVYYIPIRISDSGRPPLEGTVSLPVTFCKCVEETCFKPAGHLPGIPPVGLAVGILLTTFLVIGIILAVVFIRMKRNKGQNNAGSARASEVKPLRS
SIO_010081: CDH17
subclass of: SO_0000673
so part of: CDH17
location: complement(join(4371595..4371695,4373660..4373773,4373910..4374026,4379268..4379507,4382234..4382364,4385515..4385759,4393542..4393733,4395707..4395783,4399633..4399848,4403750..4403900,4404256..4404387,4407169..4407368,4407481..4407639,4408642..4408780,4409673..4409807,4415353..4415451,4420554..4420604))
location: region:4371595-4420604:-1
so has part: feature:4420554-4420604:-1:exon
so has part: feature:4415353-4415451:-1:exon
so has part: feature:4409673-4409807:-1:exon
so has part: feature:4408642-4408780:-1:exon
so has part: feature:4407481-4407639:-1:exon
so has part: feature:4407169-4407368:-1:exon
so has part: feature:4404256-4404387:-1:exon
so has part: feature:4403750-4403900:-1:exon
so has part: feature:4399633-4399848:-1:exon
so has part: feature:4395707-4395783:-1:exon
so has part: feature:4393542-4393733:-1:exon
so has part: feature:4385515-4385759:-1:exon
so has part: feature:4382234-4382364:-1:exon
so has part: feature:4379268-4379507:-1:exon
so has part: feature:4373910-4374026:-1:exon
so has part: feature:4373660-4373773:-1:exon
so has part: feature:4371595-4371695:-1:exon

XP_010974309.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4420554-4420604:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4415353-4415451:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4409673-4409807:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4408642-4408780:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4407481-4407639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4407169-4407368:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4404256-4404387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4403750-4403900:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4399633-4399848:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4395707-4395783:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4393542-4393733:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4385515-4385759:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4382234-4382364:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4379268-4379507:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4373910-4374026:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4373660-4373773:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4371595-4371695:-1:exon

GEM
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GEM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4472407..4497085)
location: region:4472407-4497085:-1
so has part: feature:4472407-4497085:-1:exon
subclass of: SO_0000010

105085736
type: Gene
SIO_000068: ncbigene

position:4472407:-1
position: 4472407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4497085:-1
position: 4497085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4472407-4497085:-1:exon

GEM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GEM
product: GTP binding protein overexpressed in skeletal muscle, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031439332.1
SIO_010081: GEM
subclass of: SO_0000673
so part of: GEM
location: complement(join(4472407..4474036,4475537..4475741,4476496..4476572,4483042..4483381,4496923..4497085))
location: region:4472407-4497085:-1
so has part: feature:4496923-4497085:-1:exon
so has part: feature:4483042-4483381:-1:exon
so has part: feature:4476496-4476572:-1:exon
so has part: feature:4475537-4475741:-1:exon
so has part: feature:4472407-4474036:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4496923-4497085:-1:exon

position:4496923:-1
position: 4496923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4483042-4483381:-1:exon

position:4483042:-1
position: 4483042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4483381:-1
position: 4483381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4476496-4476572:-1:exon

position:4476496:-1
position: 4476496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4476572:-1
position: 4476572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4475537-4475741:-1:exon

position:4475537:-1
position: 4475537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4475741:-1
position: 4475741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4472407-4474036:-1:exon

position:4474036:-1
position: 4474036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GEM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GEM
product: GTP binding protein overexpressed in skeletal muscle, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031439331.1
SIO_010081: GEM
subclass of: SO_0000673
so part of: GEM
location: complement(join(4472407..4474036,4475537..4475741,4476496..4476572,4483042..4483381,4484779..4484899))
location: region:4472407-4484899:-1
so has part: feature:4484779-4484899:-1:exon
so has part: feature:4483042-4483381:-1:exon
so has part: feature:4476496-4476572:-1:exon
so has part: feature:4475537-4475741:-1:exon
so has part: feature:4472407-4474036:-1:exon

position:4484899:-1
position: 4484899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4484779-4484899:-1:exon

position:4484779:-1
position: 4484779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4483042-4483381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4476496-4476572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4475537-4475741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4472407-4474036:-1:exon

GEM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GEM
product: GTP binding protein overexpressed in skeletal muscle, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031439330.1
SIO_010081: GEM
subclass of: SO_0000673
so part of: GEM
location: complement(join(4472407..4474036,4475537..4475741,4476496..4476572,4483042..4483381,4483626..4483808))
location: region:4472407-4483808:-1
so has part: feature:4483626-4483808:-1:exon
so has part: feature:4483042-4483381:-1:exon
so has part: feature:4476496-4476572:-1:exon
so has part: feature:4475537-4475741:-1:exon
so has part: feature:4472407-4474036:-1:exon

position:4483808:-1
position: 4483808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4483626-4483808:-1:exon

position:4483626:-1
position: 4483626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4483042-4483381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4476496-4476572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4475537-4475741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4472407-4474036:-1:exon

GEM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GEM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein GEM isoform X1
translation: MEEVPGQWAMLTDPAMTLNNVTMRQGTVGMQPQQQRWSIPADGRHLMVQKEPHPYSQRSRHSAAPEDHCRRSWSSDSTDSVISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLIVDGESATIILLDMWENKGENEWLQDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVRELFEGIVRQVRLRRDSKEKNERRLAYQKRRESIPRKARRFWGKIVAKNNKNMAFKLKSKSCHDLSVL
SIO_010081: GEM
subclass of: SO_0000673
so part of: GEM
location: complement(join(4473759..4474036,4475537..4475741,4476496..4476572,4483042..4483381,4483626..4483661))
location: region:4473759-4483661:-1
so has part: feature:4483626-4483661:-1:exon
so has part: feature:4483042-4483381:-1:exon
so has part: feature:4476496-4476572:-1:exon
so has part: feature:4475537-4475741:-1:exon
so has part: feature:4473759-4474036:-1:exon

XP_031295190.1
type: Protein
SIO_000068: ncbiprotein

position:4473759:-1
position: 4473759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4483661:-1
position: 4483661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4483626-4483661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4483042-4483381:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4476496-4476572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4475537-4475741:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4473759-4474036:-1:exon

GEM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GEM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein GEM isoform X2
translation: MTLNNVTMRQGTVGMQPQQQRWSIPADGRHLMVQKEPHPYSQRSRHSAAPEDHCRRSWSSDSTDSVISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLIVDGESATIILLDMWENKGENEWLQDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVRELFEGIVRQVRLRRDSKEKNERRLAYQKRRESIPRKARRFWGKIVAKNNKNMAFKLKSKSCHDLSVL
SIO_010081: GEM
subclass of: SO_0000673
so part of: GEM
location: complement(join(4473759..4474036,4475537..4475741,4476496..4476572,4483042..4483372))
location: region:4473759-4483372:-1
so has part: feature:4483042-4483372:-1:exon
so has part: feature:4476496-4476572:-1:exon
so has part: feature:4475537-4475741:-1:exon
so has part: feature:4473759-4474036:-1:exon

XP_031295191.1
type: Protein
SIO_000068: ncbiprotein

position:4483372:-1
position: 4483372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4483042-4483372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4476496-4476572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4475537-4475741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4473759-4474036:-1:exon

GEM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GEM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: GTP-binding protein GEM isoform X2
translation: MTLNNVTMRQGTVGMQPQQQRWSIPADGRHLMVQKEPHPYSQRSRHSAAPEDHCRRSWSSDSTDSVISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLIVDGESATIILLDMWENKGENEWLQDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQTEDIPIILVGNKSDLVRCREVSVSEGRACAVVFDCKFIETSAAVQHNVRELFEGIVRQVRLRRDSKEKNERRLAYQKRRESIPRKARRFWGKIVAKNNKNMAFKLKSKSCHDLSVL
SIO_010081: GEM
subclass of: SO_0000673
so part of: GEM
location: complement(join(4473759..4474036,4475537..4475741,4476496..4476572,4483042..4483372))
location: region:4473759-4483372:-1
so has part: feature:4483042-4483372:-1:exon
so has part: feature:4476496-4476572:-1:exon
so has part: feature:4475537-4475741:-1:exon
so has part: feature:4473759-4474036:-1:exon

XP_031295192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4483042-4483372:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4476496-4476572:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4475537-4475741:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4473759-4474036:-1:exon

RAD54B
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RAD54B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4551849..4622103)
location: region:4551849-4622103:-1
so has part: feature:4551849-4622103:-1:exon
subclass of: SO_0000010

105085753
type: Gene
SIO_000068: ncbigene

position:4551849:-1
position: 4551849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4622103:-1
position: 4622103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4551849-4622103:-1:exon

RAD54B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RAD54B
product: RAD54 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031439333.1
SIO_010081: RAD54B
subclass of: SO_0000673
so part of: RAD54B
location: complement(join(4551849..4553068,4557575..4557772,4558023..4558089,4559606..4559867,4563271..4563446,4567108..4567398,4569854..4569993,4574796..4575003,4575256..4575481,4577914..4578076,4581054..4581332,4584425..4584619,4616612..4616777,4620512..4620662,4621985..4622103))
location: region:4551849-4622103:-1
so has part: feature:4621985-4622103:-1:exon
so has part: feature:4620512-4620662:-1:exon
so has part: feature:4616612-4616777:-1:exon
so has part: feature:4584425-4584619:-1:exon
so has part: feature:4581054-4581332:-1:exon
so has part: feature:4577914-4578076:-1:exon
so has part: feature:4575256-4575481:-1:exon
so has part: feature:4574796-4575003:-1:exon
so has part: feature:4569854-4569993:-1:exon
so has part: feature:4567108-4567398:-1:exon
so has part: feature:4563271-4563446:-1:exon
so has part: feature:4559606-4559867:-1:exon
so has part: feature:4558023-4558089:-1:exon
so has part: feature:4557575-4557772:-1:exon
so has part: feature:4551849-4553068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4621985-4622103:-1:exon

position:4621985:-1
position: 4621985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4620512-4620662:-1:exon

position:4620512:-1
position: 4620512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620662:-1
position: 4620662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4616612-4616777:-1:exon

position:4616612:-1
position: 4616612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4616777:-1
position: 4616777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4584425-4584619:-1:exon

position:4584425:-1
position: 4584425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4584619:-1
position: 4584619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4581054-4581332:-1:exon

position:4581054:-1
position: 4581054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4581332:-1
position: 4581332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4577914-4578076:-1:exon

position:4577914:-1
position: 4577914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4578076:-1
position: 4578076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4575256-4575481:-1:exon

position:4575256:-1
position: 4575256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4575481:-1
position: 4575481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4574796-4575003:-1:exon

position:4574796:-1
position: 4574796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4575003:-1
position: 4575003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4569854-4569993:-1:exon

position:4569854:-1
position: 4569854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4569993:-1
position: 4569993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4567108-4567398:-1:exon

position:4567108:-1
position: 4567108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4567398:-1
position: 4567398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4563271-4563446:-1:exon

position:4563271:-1
position: 4563271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4563446:-1
position: 4563446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4559606-4559867:-1:exon

position:4559606:-1
position: 4559606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4559867:-1
position: 4559867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4558023-4558089:-1:exon

position:4558023:-1
position: 4558023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4558089:-1
position: 4558089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4557575-4557772:-1:exon

position:4557575:-1
position: 4557575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4557772:-1
position: 4557772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4551849-4553068:-1:exon

position:4553068:-1
position: 4553068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAD54B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RAD54B
product: RAD54 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031439334.1
SIO_010081: RAD54B
subclass of: SO_0000673
so part of: RAD54B
location: complement(join(4551849..4553068,4557575..4557772,4558023..4558089,4559606..4559867,4563271..4563446,4567108..4567398,4569854..4569993,4574796..4575003,4575256..4575481,4577914..4578076,4581054..4581332,4584425..4584619,4616612..4616777,4620512..4620662,4621918..4622032))
location: region:4551849-4622032:-1
so has part: feature:4621918-4622032:-1:exon
so has part: feature:4620512-4620662:-1:exon
so has part: feature:4616612-4616777:-1:exon
so has part: feature:4584425-4584619:-1:exon
so has part: feature:4581054-4581332:-1:exon
so has part: feature:4577914-4578076:-1:exon
so has part: feature:4575256-4575481:-1:exon
so has part: feature:4574796-4575003:-1:exon
so has part: feature:4569854-4569993:-1:exon
so has part: feature:4567108-4567398:-1:exon
so has part: feature:4563271-4563446:-1:exon
so has part: feature:4559606-4559867:-1:exon
so has part: feature:4558023-4558089:-1:exon
so has part: feature:4557575-4557772:-1:exon
so has part: feature:4551849-4553068:-1:exon

position:4622032:-1
position: 4622032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4621918-4622032:-1:exon

position:4621918:-1
position: 4621918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4620512-4620662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4616612-4616777:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4584425-4584619:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4581054-4581332:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4577914-4578076:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4575256-4575481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4574796-4575003:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4569854-4569993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4567108-4567398:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4563271-4563446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4559606-4559867:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4558023-4558089:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4557575-4557772:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4551849-4553068:-1:exon

RAD54B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RAD54B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair and recombination protein RAD54B
translation: MRRSAAPSQLQGNPFKKPKFIPPAKSNPSVNEEITKQNSDIKLLEVAASKNTFLQSQNDPRICSFNLPTEESAREINHGDNYREKCLEASAMRTLDPHHTVHSSPKEITVSKGREEEPDSLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFTLKDLEGRDIGRGIGYKCKELEKTEEGQTMMIGGKEIEVMGVISPDDFNSGRCFHVGGSSAVLSSSHAAKKCFSSPFKSVYKPSSKENSQNGFQNCKPRHDPYAPNSLVMLRPDNNHQWMFNRNCFPIVDVVVDPHLVYHLRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGRERIKVFTVDQDHKVDEFAKSPFYSVLIISYEMLLRSLDQIKSIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIISRQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLLENSSHLICIGALKKLCNHPCLLFSSVKEKEHSSTWDENEERHLYEGLISVFPADYNPLTVTEEESGKLQVLSKLLAAVHELRPAEKVVLVSNYTKTLDILQEVCKRHGYACTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTKTSEHIQFSVEELKNLFTLHENSHCVTHDLLDCKCTGENRTGDSLEKFPISRNCQLGPQQQKSNSLKPLSMSQLKQWKHFSGDQLNLTDPFLTRIRENVSFFFQNITNQTTSI
SIO_010081: RAD54B
subclass of: SO_0000673
so part of: RAD54B
location: complement(join(4552851..4553068,4557575..4557772,4558023..4558089,4559606..4559867,4563271..4563446,4567108..4567398,4569854..4569993,4574796..4575003,4575256..4575481,4577914..4578076,4581054..4581332,4584425..4584619,4616612..4616777,4620512..4620646))
location: region:4552851-4620646:-1
so has part: feature:4620512-4620646:-1:exon
so has part: feature:4616612-4616777:-1:exon
so has part: feature:4584425-4584619:-1:exon
so has part: feature:4581054-4581332:-1:exon
so has part: feature:4577914-4578076:-1:exon
so has part: feature:4575256-4575481:-1:exon
so has part: feature:4574796-4575003:-1:exon
so has part: feature:4569854-4569993:-1:exon
so has part: feature:4567108-4567398:-1:exon
so has part: feature:4563271-4563446:-1:exon
so has part: feature:4559606-4559867:-1:exon
so has part: feature:4558023-4558089:-1:exon
so has part: feature:4557575-4557772:-1:exon
so has part: feature:4552851-4553068:-1:exon

XP_031295193.1
type: Protein
SIO_000068: ncbiprotein

position:4552851:-1
position: 4552851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620646:-1
position: 4620646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4620512-4620646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4616612-4616777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4584425-4584619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4581054-4581332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4577914-4578076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4575256-4575481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4574796-4575003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4569854-4569993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4567108-4567398:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4563271-4563446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4559606-4559867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4558023-4558089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4557575-4557772:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4552851-4553068:-1:exon

RAD54B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RAD54B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA repair and recombination protein RAD54B
translation: MRRSAAPSQLQGNPFKKPKFIPPAKSNPSVNEEITKQNSDIKLLEVAASKNTFLQSQNDPRICSFNLPTEESAREINHGDNYREKCLEASAMRTLDPHHTVHSSPKEITVSKGREEEPDSLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFTLKDLEGRDIGRGIGYKCKELEKTEEGQTMMIGGKEIEVMGVISPDDFNSGRCFHVGGSSAVLSSSHAAKKCFSSPFKSVYKPSSKENSQNGFQNCKPRHDPYAPNSLVMLRPDNNHQWMFNRNCFPIVDVVVDPHLVYHLRPHQKEGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGRERIKVFTVDQDHKVDEFAKSPFYSVLIISYEMLLRSLDQIKSIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIIISRQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLLENSSHLICIGALKKLCNHPCLLFSSVKEKEHSSTWDENEERHLYEGLISVFPADYNPLTVTEEESGKLQVLSKLLAAVHELRPAEKVVLVSNYTKTLDILQEVCKRHGYACTRLDGQTPISQRQQIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTKTSEHIQFSVEELKNLFTLHENSHCVTHDLLDCKCTGENRTGDSLEKFPISRNCQLGPQQQKSNSLKPLSMSQLKQWKHFSGDQLNLTDPFLTRIRENVSFFFQNITNQTTSI
SIO_010081: RAD54B
subclass of: SO_0000673
so part of: RAD54B
location: complement(join(4552851..4553068,4557575..4557772,4558023..4558089,4559606..4559867,4563271..4563446,4567108..4567398,4569854..4569993,4574796..4575003,4575256..4575481,4577914..4578076,4581054..4581332,4584425..4584619,4616612..4616777,4620512..4620646))
location: region:4552851-4620646:-1
so has part: feature:4620512-4620646:-1:exon
so has part: feature:4616612-4616777:-1:exon
so has part: feature:4584425-4584619:-1:exon
so has part: feature:4581054-4581332:-1:exon
so has part: feature:4577914-4578076:-1:exon
so has part: feature:4575256-4575481:-1:exon
so has part: feature:4574796-4575003:-1:exon
so has part: feature:4569854-4569993:-1:exon
so has part: feature:4567108-4567398:-1:exon
so has part: feature:4563271-4563446:-1:exon
so has part: feature:4559606-4559867:-1:exon
so has part: feature:4558023-4558089:-1:exon
so has part: feature:4557575-4557772:-1:exon
so has part: feature:4552851-4553068:-1:exon

XP_031295194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4620512-4620646:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4616612-4616777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4584425-4584619:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4581054-4581332:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4577914-4578076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4575256-4575481:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4574796-4575003:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4569854-4569993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4567108-4567398:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4563271-4563446:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4559606-4559867:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4558023-4558089:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4557575-4557772:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4552851-4553068:-1:exon

FSBP
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FSBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4597261..4604266)
location: region:4597261-4604266:-1
so has part: feature:4597261-4604266:-1:exon
subclass of: SO_0000010

105085737
type: Gene
SIO_000068: ncbigene

position:4597261:-1
position: 4597261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604266:-1
position: 4604266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4597261-4604266:-1:exon

FSBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FSBP
product: fibrinogen silencer binding protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010976009.2
SIO_010081: FSBP
subclass of: SO_0000673
so part of: FSBP
location: complement(join(4597261..4599947,4603808..4604266))
location: region:4597261-4604266:-1
so has part: feature:4603808-4604266:-1:exon
so has part: feature:4597261-4599947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4603808-4604266:-1:exon

position:4603808:-1
position: 4603808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4597261-4599947:-1:exon

position:4599947:-1
position: 4599947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FSBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FSBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibrinogen silencer-binding protein
translation: MVGKARSSNFTLSEKLDLLKLVKPYVKILEEHTNKHSVIVEKNRCWDIIAVNYNAIGVDRPPRTAQGLRTLYKRLKEYAKQELLLQKETQSDFKSNISEPTKKVMELIPQISSFCLVRDRNHIQSSANVDEETQAGASSLQVMLDHHPVAITEEVKQEEDIKPPPLVLNSQQSDTLEQREEHELIHVMERSLSPSLSSVDMRMTSSPSSIPRRDDFFRHDSGEHFRSQLGYDPQILQMLKEEHEIILENQKNFGLYVQEKRDGLKRRQQLEEELLRAKIEVEKLKAIRLQHDLPEYNSL
SIO_010081: FSBP
subclass of: SO_0000673
so part of: FSBP
location: complement(join(4599422..4599947,4603808..4604181))
location: region:4599422-4604181:-1
so has part: feature:4603808-4604181:-1:exon
so has part: feature:4599422-4599947:-1:exon

XP_010974311.1
type: Protein
SIO_000068: ncbiprotein

position:4599422:-1
position: 4599422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4604181:-1
position: 4604181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4603808-4604181:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4599422-4599947:-1:exon

VIRMA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: VIRMA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4630617..4685786)
location: region:4630617-4685786:-1
so has part: feature:4630617-4685786:-1:exon
subclass of: SO_0000010

105085738
type: Gene
SIO_000068: ncbigene

position:4630617:-1
position: 4630617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4685786:-1
position: 4685786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4630617-4685786:-1:exon

VIRMA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: VIRMA
product: vir like m6A methyltransferase associated, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_010976010.2
SIO_010081: VIRMA
subclass of: SO_0000673
so part of: VIRMA
location: complement(join(4630617..4630957,4631817..4631960,4632839..4633170,4633626..4633792,4635620..4635716,4636516..4636676,4637124..4637276,4645139..4645271,4650451..4650668,4652345..4652597,4653072..4653307,4653832..4654376,4654518..4654611,4656901..4656983,4658858..4659012,4659974..4660465,4663613..4664753,4666532..4666804,4667372..4667494,4673185..4673353,4674857..4674905,4676006..4676092,4679895..4680010,4685599..4685785))
location: region:4630617-4685785:-1
so has part: feature:4685599-4685785:-1:exon
so has part: feature:4679895-4680010:-1:exon
so has part: feature:4676006-4676092:-1:exon
so has part: feature:4674857-4674905:-1:exon
so has part: feature:4673185-4673353:-1:exon
so has part: feature:4667372-4667494:-1:exon
so has part: feature:4666532-4666804:-1:exon
so has part: feature:4663613-4664753:-1:exon
so has part: feature:4659974-4660465:-1:exon
so has part: feature:4658858-4659012:-1:exon
so has part: feature:4656901-4656983:-1:exon
so has part: feature:4654518-4654611:-1:exon
so has part: feature:4653832-4654376:-1:exon
so has part: feature:4653072-4653307:-1:exon
so has part: feature:4652345-4652597:-1:exon
so has part: feature:4650451-4650668:-1:exon
so has part: feature:4645139-4645271:-1:exon
so has part: feature:4637124-4637276:-1:exon
so has part: feature:4636516-4636676:-1:exon
so has part: feature:4635620-4635716:-1:exon
so has part: feature:4633626-4633792:-1:exon
so has part: feature:4632839-4633170:-1:exon
so has part: feature:4631817-4631960:-1:exon
so has part: feature:4630617-4630957:-1:exon

position:4685785:-1
position: 4685785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4685599-4685785:-1:exon

position:4685599:-1
position: 4685599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4679895-4680010:-1:exon

position:4679895:-1
position: 4679895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4680010:-1
position: 4680010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4676006-4676092:-1:exon

position:4676006:-1
position: 4676006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4676092:-1
position: 4676092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4674857-4674905:-1:exon

position:4674857:-1
position: 4674857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4674905:-1
position: 4674905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4673185-4673353:-1:exon

position:4673185:-1
position: 4673185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4673353:-1
position: 4673353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4667372-4667494:-1:exon

position:4667372:-1
position: 4667372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4667494:-1
position: 4667494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4666532-4666804:-1:exon

position:4666532:-1
position: 4666532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4666804:-1
position: 4666804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4663613-4664753:-1:exon

position:4663613:-1
position: 4663613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4664753:-1
position: 4664753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4659974-4660465:-1:exon

position:4659974:-1
position: 4659974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4660465:-1
position: 4660465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4658858-4659012:-1:exon

position:4658858:-1
position: 4658858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4659012:-1
position: 4659012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4656901-4656983:-1:exon

position:4656901:-1
position: 4656901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4656983:-1
position: 4656983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4654518-4654611:-1:exon

position:4654518:-1
position: 4654518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4654611:-1
position: 4654611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4653832-4654376:-1:exon

position:4653832:-1
position: 4653832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4654376:-1
position: 4654376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4653072-4653307:-1:exon

position:4653072:-1
position: 4653072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4653307:-1
position: 4653307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4652345-4652597:-1:exon

position:4652345:-1
position: 4652345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4652597:-1
position: 4652597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4650451-4650668:-1:exon

position:4650451:-1
position: 4650451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4650668:-1
position: 4650668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4645139-4645271:-1:exon

position:4645139:-1
position: 4645139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4645271:-1
position: 4645271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4637124-4637276:-1:exon

position:4637124:-1
position: 4637124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4637276:-1
position: 4637276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4636516-4636676:-1:exon

position:4636516:-1
position: 4636516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4636676:-1
position: 4636676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4635620-4635716:-1:exon

position:4635620:-1
position: 4635620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4635716:-1
position: 4635716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4633626-4633792:-1:exon

position:4633626:-1
position: 4633626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4633792:-1
position: 4633792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4632839-4633170:-1:exon

position:4632839:-1
position: 4632839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4633170:-1
position: 4633170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4631817-4631960:-1:exon

position:4631817:-1
position: 4631817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4631960:-1
position: 4631960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4630617-4630957:-1:exon

position:4630957:-1
position: 4630957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VIRMA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: VIRMA
product: vir like m6A methyltransferase associated, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_010976012.2
SIO_010081: VIRMA
subclass of: SO_0000673
so part of: VIRMA
location: complement(join(4630662..4630957,4631817..4631960,4632839..4633170,4633626..4633792,4635620..4635716,4636516..4636676,4645139..4645271,4650451..4650668,4652345..4652597,4653072..4653307,4653832..4654376,4654518..4654611,4656901..4656983,4658858..4659012,4659974..4660465,4663613..4664753,4666532..4666804,4667372..4667494,4673185..4673353,4674857..4674905,4676006..4676092,4679895..4680010,4685599..4685786))
location: region:4630662-4685786:-1
so has part: feature:4685599-4685786:-1:exon
so has part: feature:4679895-4680010:-1:exon
so has part: feature:4676006-4676092:-1:exon
so has part: feature:4674857-4674905:-1:exon
so has part: feature:4673185-4673353:-1:exon
so has part: feature:4667372-4667494:-1:exon
so has part: feature:4666532-4666804:-1:exon
so has part: feature:4663613-4664753:-1:exon
so has part: feature:4659974-4660465:-1:exon
so has part: feature:4658858-4659012:-1:exon
so has part: feature:4656901-4656983:-1:exon
so has part: feature:4654518-4654611:-1:exon
so has part: feature:4653832-4654376:-1:exon
so has part: feature:4653072-4653307:-1:exon
so has part: feature:4652345-4652597:-1:exon
so has part: feature:4650451-4650668:-1:exon
so has part: feature:4645139-4645271:-1:exon
so has part: feature:4636516-4636676:-1:exon
so has part: feature:4635620-4635716:-1:exon
so has part: feature:4633626-4633792:-1:exon
so has part: feature:4632839-4633170:-1:exon
so has part: feature:4631817-4631960:-1:exon
so has part: feature:4630662-4630957:-1:exon

position:4630662:-1
position: 4630662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4685599-4685786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4679895-4680010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4676006-4676092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4674857-4674905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4673185-4673353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4667372-4667494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4666532-4666804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4663613-4664753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4659974-4660465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4658858-4659012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4656901-4656983:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4654518-4654611:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4653832-4654376:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4653072-4653307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4652345-4652597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4650451-4650668:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4645139-4645271:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4636516-4636676:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4635620-4635716:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4633626-4633792:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4632839-4633170:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4631817-4631960:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4630662-4630957:-1:exon

VIRMA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: VIRMA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein virilizer homolog isoform X2
translation: MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYGETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCLTLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPMPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEDEEDDVDVEEEEDEDEDDRHTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFEIEISRMKDQGPDKENSGAIEASVKLTELLDLYHEDRGAKWVTALEEIPSLIIKGLSYLQLKNTKQDALGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQAGVINGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRSRQSEKSGYQKLLELILLDQTVRVVTAGSAILQKCHFYEILSEIKRLGDHLAEKTSSVPNHSDPDHDTDTGLERTNPEYENEVEASMDMDLLESSNISEGEIEKLINLLEEVFHLMETAPHTMIQPPVKSFPTMARITGPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLFFMSEYEATNLLIRALCHLYDQDEEEGLQSDGVVDDAFALWLQDSTQTLQCITELFSHFQRCTASEETDHSDLLGTLHSLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDSKSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNVRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTELLRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVIEPHDISVALNTRKLWSMHLHVQAKLLQEIVRSFSGTTCQPIQHMLRRICVQLCDLASPTALLIMRTVLDLIVEDLQSTSEDKEKQYTSQTTRLLALLDALASHKACKLAILHLINGTVKGDERYAEIFQELLALVRSPGDSVIRQQCVEYITSILQSLCDQDIALILPNSSEGSISELEQLSNSLPNKELMASICDCLLAMLANSESSYNCLLTCVRTMMFLAEHDYGLFHLKSSLRKNSNALHSLLKRVISTFSKDTGELASSFLEFMRQILNSDTMEHSKDDDNLDSLLDNVVGLKQMLESSGDPLPLGDQDVEPVLSAPESLQNLFNNRTAYVLADVMDDQLKSMWFTPFQAEEIDTDLDLVKVDLIELSEKCCSDFDLHAELERSFLSEPSSPGRTKTTKGFKLGKHKHETFITSSGKSEYIEPAKRAHVVPPPRGRGRGGFGQGIRPHDIFRQRKQNTSRPPSMHVDDFVAAESKEVVPQDGIPPPKRPLKVSQKISSRGGFSGNRGGRGAFHSQNRFFTPPASKGNYSRREGTRGSSWSAQNTPRGTYNESRGGQSNFNRGPLPPLRPLSSTGYRPSPRDRASRGRGGLGPSWASANSGSGGSRGKFVSGGSGRGRHVRSFTR
SIO_010081: VIRMA
subclass of: SO_0000673
so part of: VIRMA
location: complement(join(4630803..4630957,4631817..4631960,4632839..4633170,4633626..4633792,4635620..4635716,4636516..4636676,4645139..4645271,4650451..4650668,4652345..4652597,4653072..4653307,4653832..4654376,4654518..4654611,4656901..4656983,4658858..4659012,4659974..4660465,4663613..4664753,4666532..4666804,4667372..4667494,4673185..4673353,4674857..4674905,4676006..4676092,4679895..4680010,4685599..4685661))
location: region:4630803-4685661:-1
so has part: feature:4685599-4685661:-1:exon
so has part: feature:4679895-4680010:-1:exon
so has part: feature:4676006-4676092:-1:exon
so has part: feature:4674857-4674905:-1:exon
so has part: feature:4673185-4673353:-1:exon
so has part: feature:4667372-4667494:-1:exon
so has part: feature:4666532-4666804:-1:exon
so has part: feature:4663613-4664753:-1:exon
so has part: feature:4659974-4660465:-1:exon
so has part: feature:4658858-4659012:-1:exon
so has part: feature:4656901-4656983:-1:exon
so has part: feature:4654518-4654611:-1:exon
so has part: feature:4653832-4654376:-1:exon
so has part: feature:4653072-4653307:-1:exon
so has part: feature:4652345-4652597:-1:exon
so has part: feature:4650451-4650668:-1:exon
so has part: feature:4645139-4645271:-1:exon
so has part: feature:4636516-4636676:-1:exon
so has part: feature:4635620-4635716:-1:exon
so has part: feature:4633626-4633792:-1:exon
so has part: feature:4632839-4633170:-1:exon
so has part: feature:4631817-4631960:-1:exon
so has part: feature:4630803-4630957:-1:exon

XP_010974314.1
type: Protein
SIO_000068: ncbiprotein

position:4630803:-1
position: 4630803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4685661:-1
position: 4685661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4685599-4685661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4679895-4680010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4676006-4676092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4674857-4674905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4673185-4673353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4667372-4667494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4666532-4666804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4663613-4664753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4659974-4660465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4658858-4659012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4656901-4656983:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4654518-4654611:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4653832-4654376:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4653072-4653307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4652345-4652597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4650451-4650668:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4645139-4645271:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4636516-4636676:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4635620-4635716:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4633626-4633792:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4632839-4633170:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4631817-4631960:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4630803-4630957:-1:exon

VIRMA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: VIRMA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein virilizer homolog isoform X1
translation: MAVDSAMELLFLDTFKHPSAEQSSHIDVVRFPCVVYINEVRVIPPGVRAHSSLPDNRAYGETSPHTFQLDLFFNNVSKPSAPVFDRLGSLEYDENTSIIFRPNSKVNTDGLVLRGWYNCLTLAIYGSVDRVISHDRDSPPPPPPPPPPPQPQPSLKRNPKHADGEKEDQFNGSPPRPQPRGPRTPPGPPPPDDDEDDPMPLPVSGDKEEDAPHREDYFEPISPDRNSVPQEGQYSDEGEVEEEQQEEGEDEEDDVDVEEEEDEDEDDRHTVDSIPEEEEEDEEEEGEEDEEGEGDDGYEQISSDEDGIADLERETFKYPNFDVEYTAEDLASVPPMTYDPYDRELVPLLYFSCPYKTTFEIEISRMKDQGPDKENSGAIEASVKLTELLDLYHEDRGAKWVTALEEIPSLIIKGLSYLQLKNTKQDALGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQGVTGLLQAGVINGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRSRQSEKSGYQKLLELILLDQTVRVVTAGSAILQKCHFYEILSEIKRLGDHLAEKTSSVPNHSDPDHDTDTGLERTNPEYENEVEASMDMDLLESSNISEGEIEKLINLLEEVFHLMETAPHTMIQPPVKSFPTMARITGPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLFFMSEYEATNLLIRALCHLYDQDEEEGLQSDGVVDDAFALWLQDSTQTLQCITELFSHFQRCTASEETDHSDLLGTLHSLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDSKSKKSVAYNYACILILVVVQSSSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNVRFEINCIPNLIEYVKQNIDNLMTPEGVGLTTALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVTTISMARCTLTLLKTMLTELLRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTFTQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVIEPHDISVALNTRKLWSMHLHVQAKLLQEIVRSFSGTTCQPIQHMLRRICVQLCDLASPTALLIMRTVLDLIVEDLQSTSEDKEKQYTSQTTRLLALLDALASHKACKLAILHLINGTVKGDERYAEIFQELLALVRSPGDSVIRQQCVEYITSILQSLCDQDIALILPNSSEGSISELEQLSNSLPNKELMASICDCLLAMLANSESSYNCLLTCVRTMMFLAEHDYGLFHLKSSLRKNSNALHSLLKRVISTFSKDTGELASSFLEFMRQILNSDTMGCCGDDSGLMEVEGAHPSRTMSINAAELKQLLQSKEESPENLFLELEKLVLEHSKDDDNLDSLLDNVVGLKQMLESSGDPLPLGDQDVEPVLSAPESLQNLFNNRTAYVLADVMDDQLKSMWFTPFQAEEIDTDLDLVKVDLIELSEKCCSDFDLHAELERSFLSEPSSPGRTKTTKGFKLGKHKHETFITSSGKSEYIEPAKRAHVVPPPRGRGRGGFGQGIRPHDIFRQRKQNTSRPPSMHVDDFVAAESKEVVPQDGIPPPKRPLKVSQKISSRGGFSGNRGGRGAFHSQNRFFTPPASKGNYSRREGTRGSSWSAQNTPRGTYNESRGGQSNFNRGPLPPLRPLSSTGYRPSPRDRASRGRGGLGPSWASANSGSGGSRGKFVSGGSGRGRHVRSFTR
SIO_010081: VIRMA
subclass of: SO_0000673
so part of: VIRMA
location: complement(join(4630803..4630957,4631817..4631960,4632839..4633170,4633626..4633792,4635620..4635716,4636516..4636676,4637124..4637276,4645139..4645271,4650451..4650668,4652345..4652597,4653072..4653307,4653832..4654376,4654518..4654611,4656901..4656983,4658858..4659012,4659974..4660465,4663613..4664753,4666532..4666804,4667372..4667494,4673185..4673353,4674857..4674905,4676006..4676092,4679895..4680010,4685599..4685661))
location: region:4630803-4685661:-1
so has part: feature:4685599-4685661:-1:exon
so has part: feature:4679895-4680010:-1:exon
so has part: feature:4676006-4676092:-1:exon
so has part: feature:4674857-4674905:-1:exon
so has part: feature:4673185-4673353:-1:exon
so has part: feature:4667372-4667494:-1:exon
so has part: feature:4666532-4666804:-1:exon
so has part: feature:4663613-4664753:-1:exon
so has part: feature:4659974-4660465:-1:exon
so has part: feature:4658858-4659012:-1:exon
so has part: feature:4656901-4656983:-1:exon
so has part: feature:4654518-4654611:-1:exon
so has part: feature:4653832-4654376:-1:exon
so has part: feature:4653072-4653307:-1:exon
so has part: feature:4652345-4652597:-1:exon
so has part: feature:4650451-4650668:-1:exon
so has part: feature:4645139-4645271:-1:exon
so has part: feature:4637124-4637276:-1:exon
so has part: feature:4636516-4636676:-1:exon
so has part: feature:4635620-4635716:-1:exon
so has part: feature:4633626-4633792:-1:exon
so has part: feature:4632839-4633170:-1:exon
so has part: feature:4631817-4631960:-1:exon
so has part: feature:4630803-4630957:-1:exon

XP_010974312.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4685599-4685661:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4679895-4680010:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4676006-4676092:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4674857-4674905:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4673185-4673353:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4667372-4667494:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4666532-4666804:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4663613-4664753:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4659974-4660465:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4658858-4659012:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4656901-4656983:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4654518-4654611:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4653832-4654376:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4653072-4653307:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4652345-4652597:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4650451-4650668:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4645139-4645271:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4637124-4637276:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4636516-4636676:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4635620-4635716:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4633626-4633792:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4632839-4633170:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4631817-4631960:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4630803-4630957:-1:exon

TRNAV-CAC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAV-CAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(4634754..4634825)
location: region:4634754-4634825:-1
so has part: feature:4634754-4634825:-1:exon
subclass of: SO_0000663

116149068
type: Gene
SIO_000068: ncbigene

position:4634754:-1
position: 4634754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4634825:-1
position: 4634825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4634754-4634825:-1:exon

TRNAV-CAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAV-CAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon CAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(4634791..4634793),aa:Val, seq:cac)
SIO_010081: TRNAV-CAC
subclass of: SO_0000673
so part of: TRNAV-CAC
location: complement(4634754..4634825)
location: region:4634754-4634825:-1
so has part: feature:4634754-4634825:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4634754-4634825:-1:exon

LOC116148893
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4685947..4692676
location: region:4685947-4692676:1
so has part: feature:4685947-4692676:1:exon
subclass of: SO_0000011

116148893
type: Gene
SIO_000068: ncbigene

position:4685947:1
position: 4685947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4692676:1
position: 4692676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4685947-4692676:1:exon

LOC116148893
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148893
product: uncharacterized LOC116148893
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004132468.1
SIO_010081: LOC116148893
subclass of: SO_0000673
so part of: LOC116148893
location: join(4685947..4686103,4691568..4691601,4691761..4692676)
location: region:4685947-4692676:1
so has part: feature:4685947-4686103:1:exon
so has part: feature:4691568-4691601:1:exon
so has part: feature:4691761-4692676:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4685947-4686103:1:exon

position:4686103:1
position: 4686103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4691568-4691601:1:exon

position:4691568:1
position: 4691568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4691601:1
position: 4691601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4691761-4692676:1:exon

position:4691761:1
position: 4691761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116149051
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149051
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4701788..4701918
location: region:4701788-4701918:1
so has part: feature:4701788-4701918:1:exon
subclass of: SO_0000578

116149051
type: Gene
SIO_000068: ncbigene

position:4701788:1
position: 4701788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4701918:1
position: 4701918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4701788-4701918:1:exon

LOC116149051
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116149051
product: small nucleolar RNA SNORA30/SNORA37 family
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00415
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132688.1
SIO_010081: LOC116149051
subclass of: SO_0000673
so part of: LOC116149051
location: 4701788..4701918
location: region:4701788-4701918:1
so has part: feature:4701788-4701918:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4701788-4701918:1:exon

ESRP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ESRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4750341..4799300
location: region:4750341-4799300:1
so has part: feature:4750341-4799300:1:exon
subclass of: SO_0000010

105085739
type: Gene
SIO_000068: ncbigene

position:4750341:1
position: 4750341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4799300:1
position: 4799300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750341-4799300:1:exon

ESRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ESRP1
product: epithelial splicing regulatory protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031439339.1
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750341..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4792606..4792715,4797748..4799300)
location: region:4750341-4799300:1
so has part: feature:4750341-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4792606-4792715:1:exon
so has part: feature:4797748-4799300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4750341-4750670:1:exon

position:4750670:1
position: 4750670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

position:4751178:1
position: 4751178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4751306:1
position: 4751306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

position:4752566:1
position: 4752566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4752679:1
position: 4752679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

position:4755505:1
position: 4755505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4755619:1
position: 4755619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

position:4765997:1
position: 4765997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4766095:1
position: 4766095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

position:4766231:1
position: 4766231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4766285:1
position: 4766285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

position:4767537:1
position: 4767537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4767647:1
position: 4767647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

position:4767772:1
position: 4767772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4767904:1
position: 4767904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

position:4768000:1
position: 4768000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4768042:1
position: 4768042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

position:4770176:1
position: 4770176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4770477:1
position: 4770477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

position:4773272:1
position: 4773272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4773490:1
position: 4773490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

position:4775712:1
position: 4775712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4775910:1
position: 4775910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

position:4778786:1
position: 4778786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4778954:1
position: 4778954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4792606-4792715:1:exon

position:4792606:1
position: 4792606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4792715:1
position: 4792715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4797748-4799300:1:exon

position:4797748:1
position: 4797748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ESRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ESRP1
product: epithelial splicing regulatory protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_010976013.2
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750342..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775898,4778786..4778954,4789062..4789212,4797748..4799300)
location: region:4750342-4799300:1
so has part: feature:4750342-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775898:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4797748-4799300:1:exon

position:4750342:1
position: 4750342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750342-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775898:1:exon

position:4775898:1
position: 4775898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

position:4789062:1
position: 4789062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4789212:1
position: 4789212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4797748-4799300:1:exon

ESRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ESRP1
product: epithelial splicing regulatory protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_031439338.1
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750343..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4789062..4789212,4797748..4799300)
location: region:4750343-4799300:1
so has part: feature:4750343-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4797748-4799300:1:exon

position:4750343:1
position: 4750343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750343-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4797748-4799300:1:exon

ESRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ESRP1
product: epithelial splicing regulatory protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_031439340.1
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750343..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4797748..4799300)
location: region:4750343-4799300:1
so has part: feature:4750343-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4797748-4799300:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4750343-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4797748-4799300:1:exon

ESRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ESRP1
product: epithelial splicing regulatory protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031439337.1
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750344..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775898,4778786..4778954,4789062..4789212,4792606..4792715,4797748..4799300)
location: region:4750344-4799300:1
so has part: feature:4750344-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775898:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4792606-4792715:1:exon
so has part: feature:4797748-4799300:1:exon

position:4750344:1
position: 4750344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750344-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4792606-4792715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4797748-4799300:1:exon

ESRP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ESRP1
product: epithelial splicing regulatory protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031439336.1
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750345..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4789062..4789212,4792606..4792715,4797748..4799300)
location: region:4750345-4799300:1
so has part: feature:4750345-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4792606-4792715:1:exon
so has part: feature:4797748-4799300:1:exon

position:4750345:1
position: 4750345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750345-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4792606-4792715:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4797748-4799300:1:exon

ESRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ESRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 1 isoform X3
translation: MTASPDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKVGQLHEVLVRPDQLELTEDCKEETKIDAESLSSAPQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTEYLNFEKNGSASRYGASQVEDMGNIILAMISDPYNHRFSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQCLKDAW
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750539..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4789062..4789212,4797748..4797768)
location: region:4750539-4797768:1
so has part: feature:4750539-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4797748-4797768:1:exon

XP_031295198.1
type: Protein
SIO_000068: ncbiprotein

position:4750539:1
position: 4750539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4797768:1
position: 4797768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750539-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4797748-4797768:1:exon

ESRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ESRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 1 isoform X4
translation: MTASPDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKVGQLHEVLVRPDQLELTEDCKEETKIDAESLSSAPQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTEYLNFEKNGSASRYGASQVEDMGNIILAMISDPYNHRFSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQCLKDAW
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750539..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775898,4778786..4778954,4789062..4789212,4797748..4797768)
location: region:4750539-4797768:1
so has part: feature:4750539-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775898:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4797748-4797768:1:exon

XP_010974315.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4750539-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4797748-4797768:1:exon

ESRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ESRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 1 isoform X6
translation: MTASPDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKVGQLHEVLVRPDQLELTEDCKEETKIDAESLSSAPQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTEYLNFEKNGSASRYGASQVEDMGNIILAMISDPYNHRFSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSV
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750539..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4797748..4797754)
location: region:4750539-4797754:1
so has part: feature:4750539-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4797748-4797754:1:exon

XP_031295200.1
type: Protein
SIO_000068: ncbiprotein

position:4797754:1
position: 4797754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750539-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4797748-4797754:1:exon

ESRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ESRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 1 isoform X5
translation: MTASPDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKVGQLHEVLVRPDQLELTEDCKEETKIDAESLSSAPQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTEYLNFEKNGSASRYGASQVEDMGNIILAMISDPYNHRFSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSMQPRMDLFTQMTRPGLYPKNGFVFKGPSS
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750539..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4792606..4792696)
location: region:4750539-4792696:1
so has part: feature:4750539-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4792606-4792696:1:exon

XP_031295199.1
type: Protein
SIO_000068: ncbiprotein

position:4792696:1
position: 4792696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750539-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4792606-4792696:1:exon

ESRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ESRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 1 isoform X1
translation: MTASPDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKVGQLHEVLVRPDQLELTEDCKEETKIDAESLSSAPQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTEYLNFEKNGSASRYGASQVEDMGNIILAMISDPYNHRFSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCKLPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQYATEDGLVHTNDQARTLSKEWVCI
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750539..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775910,4778786..4778954,4789062..4789212,4792606..4792680)
location: region:4750539-4792680:1
so has part: feature:4750539-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775910:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4792606-4792680:1:exon

XP_031295196.1
type: Protein
SIO_000068: ncbiprotein

position:4792680:1
position: 4792680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4750539-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775910:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4792606-4792680:1:exon

ESRP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ESRP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: epithelial splicing regulatory protein 1 isoform X2
translation: MTASPDYLVVLFGITAGATGAKLGSDEKELILLLWKVVDLANKKVGQLHEVLVRPDQLELTEDCKEETKIDAESLSSAPQLDQALRQFNQSVSNELNIGVGTSFCLCTDGQLHVRQILHPEASKKNVLLPECFYSFFDLRKEFKKCCPGSPDIDKLDVAAMTEYLNFEKNGSASRYGASQVEDMGNIILAMISDPYNHRFSDPERVNYKFESGTCSKMELIDDNTVVRARGLPWQSSDQDIARFFKGLNIAKGGAALCLNAQGRRNGEALVRFVSEEHRDLALQRHKHHMGTRYIEVYKATGEDFLKIAGGTSNEVAQFLSKENQVIVRMRGLPFTATADEVVAFFGQHCPITGGKEGILFVTYPDGRPTGDAFVLFACEEYAQNALRKHKDLLGKRYIELFRSTAAEVQQVLNRFSSAPLIPLPTPPIIPVLPQQFVPPTNIRDCVRLRGLPYAATIEDILDFLGEFSTDIRTHGVHMVLNHQGRPSGDAFIQMKSADRAFMAAQKCHKKTMKDRYVEVFQCSAEEMNFVLMGGTLNRNGLSPPPCLSPPSYTFPAPAAVIPTEAAIYQPSVLLNPRALQPSTAYYPAGTQLFMNYTAYYPSPPGSPNSLGYFPTAANLSGVPPQPGTVVRMQGLAYNTGVKEILNFFQGYQYATEDGLVHTNDQARTLSKEWVCI
SIO_010081: ESRP1
subclass of: SO_0000673
so part of: ESRP1
location: join(4750539..4750670,4751178..4751306,4752566..4752679,4755505..4755619,4765997..4766095,4766231..4766285,4767537..4767647,4767772..4767904,4768000..4768042,4770176..4770477,4773272..4773490,4775712..4775898,4778786..4778954,4789062..4789212,4792606..4792680)
location: region:4750539-4792680:1
so has part: feature:4750539-4750670:1:exon
so has part: feature:4751178-4751306:1:exon
so has part: feature:4752566-4752679:1:exon
so has part: feature:4755505-4755619:1:exon
so has part: feature:4765997-4766095:1:exon
so has part: feature:4766231-4766285:1:exon
so has part: feature:4767537-4767647:1:exon
so has part: feature:4767772-4767904:1:exon
so has part: feature:4768000-4768042:1:exon
so has part: feature:4770176-4770477:1:exon
so has part: feature:4773272-4773490:1:exon
so has part: feature:4775712-4775898:1:exon
so has part: feature:4778786-4778954:1:exon
so has part: feature:4789062-4789212:1:exon
so has part: feature:4792606-4792680:1:exon

XP_031295197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4750539-4750670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4751178-4751306:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4752566-4752679:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4755505-4755619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4765997-4766095:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4766231-4766285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4767537-4767647:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4767772-4767904:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4768000-4768042:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4770176-4770477:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4773272-4773490:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4775712-4775898:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4778786-4778954:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4789062-4789212:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4792606-4792680:1:exon

LOC105085755
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105085755
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4799514..4802244
location: region:4799514-4802244:1
so has part: feature:4799514-4802244:1:exon

105085755
type: Gene
SIO_000068: ncbigene

position:4799514:1
position: 4799514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4802244:1
position: 4802244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4799514-4802244:1:exon

LOC105085755
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085755
subclass of: SO_0000673
so part of: LOC105085755
location: 4799514..4799530
location: region:4799514-4799530:1
so has part: feature:4799514-4799530:1:exon

position:4799530:1
position: 4799530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4799514-4799530:1:exon

LOC105085755
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085755
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085755
subclass of: SO_0000673
so part of: LOC105085755
location: 4801473..4802244
location: region:4801473-4802244:1
so has part: feature:4801473-4802244:1:exon

position:4801473:1
position: 4801473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4801473-4802244:1:exon

DPY19L4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: DPY19L4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4808184..4855790
location: region:4808184-4855790:1
so has part: feature:4808184-4855790:1:exon
subclass of: SO_0000010

105085740
type: Gene
SIO_000068: ncbigene

position:4808184:1
position: 4808184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4855790:1
position: 4855790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4808184-4855790:1:exon

DPY19L4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DPY19L4
product: dpy-19 like 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_031439341.1
SIO_010081: DPY19L4
subclass of: SO_0000673
so part of: DPY19L4
location: join(4808184..4808340,4812691..4812801,4818003..4818127,4820354..4820444,4820722..4820843,4820958..4821103,4827407..4827530,4831721..4831855,4834097..4834228,4834334..4834432,4835012..4835085,4837400..4837558,4838447..4838566,4841931..4842051,4843918..4843974,4844709..4844791,4847506..4847638,4849936..4850094,4851767..4855790)
location: region:4808184-4855790:1
so has part: feature:4808184-4808340:1:exon
so has part: feature:4812691-4812801:1:exon
so has part: feature:4818003-4818127:1:exon
so has part: feature:4820354-4820444:1:exon
so has part: feature:4820722-4820843:1:exon
so has part: feature:4820958-4821103:1:exon
so has part: feature:4827407-4827530:1:exon
so has part: feature:4831721-4831855:1:exon
so has part: feature:4834097-4834228:1:exon
so has part: feature:4834334-4834432:1:exon
so has part: feature:4835012-4835085:1:exon
so has part: feature:4837400-4837558:1:exon
so has part: feature:4838447-4838566:1:exon
so has part: feature:4841931-4842051:1:exon
so has part: feature:4843918-4843974:1:exon
so has part: feature:4844709-4844791:1:exon
so has part: feature:4847506-4847638:1:exon
so has part: feature:4849936-4850094:1:exon
so has part: feature:4851767-4855790:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4808184-4808340:1:exon

position:4808340:1
position: 4808340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4812691-4812801:1:exon

position:4812691:1
position: 4812691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4812801:1
position: 4812801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4818003-4818127:1:exon

position:4818003:1
position: 4818003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4818127:1
position: 4818127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4820354-4820444:1:exon

position:4820354:1
position: 4820354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4820444:1
position: 4820444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4820722-4820843:1:exon

position:4820722:1
position: 4820722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4820843:1
position: 4820843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4820958-4821103:1:exon

position:4820958:1
position: 4820958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4821103:1
position: 4821103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4827407-4827530:1:exon

position:4827407:1
position: 4827407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4827530:1
position: 4827530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4831721-4831855:1:exon

position:4831721:1
position: 4831721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4831855:1
position: 4831855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4834097-4834228:1:exon

position:4834097:1
position: 4834097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4834228:1
position: 4834228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4834334-4834432:1:exon

position:4834334:1
position: 4834334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4834432:1
position: 4834432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4835012-4835085:1:exon

position:4835012:1
position: 4835012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4835085:1
position: 4835085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4837400-4837558:1:exon

position:4837400:1
position: 4837400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4837558:1
position: 4837558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4838447-4838566:1:exon

position:4838447:1
position: 4838447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4838566:1
position: 4838566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4841931-4842051:1:exon

position:4841931:1
position: 4841931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4842051:1
position: 4842051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4843918-4843974:1:exon

position:4843918:1
position: 4843918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4843974:1
position: 4843974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4844709-4844791:1:exon

position:4844709:1
position: 4844709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4844791:1
position: 4844791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4847506-4847638:1:exon

position:4847506:1
position: 4847506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4847638:1
position: 4847638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4849936-4850094:1:exon

position:4849936:1
position: 4849936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4850094:1
position: 4850094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4851767-4855790:1:exon

position:4851767:1
position: 4851767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DPY19L4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DPY19L4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable C-mannosyltransferase DPY19L4
translation: MAEEEGPTIELRQRKKPKSSENKESTKEEKITDTPTPERTPKHILLQRFAKIFIGCLAAVTSGMIYALYLSAYHERKFWFSNRQELEREVTFQGDSAIYYSYYKDMLKAPSFERGVYELTHNNRTVSLKTINAVQQMSLYPELIASVLYQATGSNEIIEPVYFYIGIVFGLQGVYVTALFVTSWLMSGTWLAGMLTVAWFIINRVDTTRIEYSIPLRENWALPYFACQVAALTGYLKSNLNTYGERFCYLLMSASTYTFVMMWEYSHYLLFLQAISLFLLDSFSLEQSDKVHEVYKIYVFSLFLGYLLQFENSALLVSPLLSLVVALMLAKCLQLNVKKGTFVAKIMKVINFYLVCTLTVTLNIIMKMFVPHKENGHMLKFLEVKFGLNMTKNFTMNWLLCQESLQAPSQDFFLRLTQSSLLPFYILVLIICFLSMIQVIFRRINGKSLKETVTLEDGRIGERPEIIYHVIHTILLGSLAMVIEGLKYLWTPYVCMLAAFGVCSPELWMTLFKWLRLRTVHPVLLALVLSMAVPTIIGLSLWKEFFPRLMTELMELQEFYDPDTVELMTWIKRQAPVAAVFAGSPQLMGTIKLCTGWMVTSLPLYNDDDLLKRNENIYQIYSKRSAEDIYKILTSYKANYLIVEDAICNEVGTMRGCRVKDLLDIANGHVVCEEGDKLTYSKHGRFCHEVKINYSPYVNYFTRVYWNRSYFVYKINTVISFQS
SIO_010081: DPY19L4
subclass of: SO_0000673
so part of: DPY19L4
location: join(4808325..4808340,4812691..4812801,4818003..4818127,4820354..4820444,4820722..4820843,4820958..4821103,4827407..4827530,4831721..4831855,4834097..4834228,4834334..4834432,4835012..4835085,4837400..4837558,4838447..4838566,4841931..4842051,4843918..4843974,4844709..4844791,4847506..4847638,4849936..4850094,4851767..4851931)
location: region:4808325-4851931:1
so has part: feature:4808325-4808340:1:exon
so has part: feature:4812691-4812801:1:exon
so has part: feature:4818003-4818127:1:exon
so has part: feature:4820354-4820444:1:exon
so has part: feature:4820722-4820843:1:exon
so has part: feature:4820958-4821103:1:exon
so has part: feature:4827407-4827530:1:exon
so has part: feature:4831721-4831855:1:exon
so has part: feature:4834097-4834228:1:exon
so has part: feature:4834334-4834432:1:exon
so has part: feature:4835012-4835085:1:exon
so has part: feature:4837400-4837558:1:exon
so has part: feature:4838447-4838566:1:exon
so has part: feature:4841931-4842051:1:exon
so has part: feature:4843918-4843974:1:exon
so has part: feature:4844709-4844791:1:exon
so has part: feature:4847506-4847638:1:exon
so has part: feature:4849936-4850094:1:exon
so has part: feature:4851767-4851931:1:exon

XP_031295201.1
type: Protein
SIO_000068: ncbiprotein

position:4808325:1
position: 4808325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4851931:1
position: 4851931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4808325-4808340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4812691-4812801:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4818003-4818127:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4820354-4820444:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4820722-4820843:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4820958-4821103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4827407-4827530:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4831721-4831855:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4834097-4834228:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4834334-4834432:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4835012-4835085:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4837400-4837558:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4838447-4838566:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4841931-4842051:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4843918-4843974:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4844709-4844791:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4847506-4847638:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4849936-4850094:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4851767-4851931:1:exon

INTS8
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: INTS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4878284..4930705
location: region:4878284-4930705:1
so has part: feature:4878284-4930705:1:exon
subclass of: SO_0000010

105085742
type: Gene
SIO_000068: ncbigene

position:4878284:1
position: 4878284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4930705:1
position: 4930705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4878284-4930705:1:exon

INTS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS8
product: integrator complex subunit 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_031439343.1
SIO_010081: INTS8
subclass of: SO_0000673
so part of: INTS8
location: join(4878284..4878575,4879829..4880003,4881855..4881995,4882322..4882393,4883115..4883166,4884063..4884245,4886507..4886614,4888119..4888274,4890310..4890410,4890838..4890979,4895080..4895150,4895545..4895720,4896861..4896994,4898191..4898301,4899524..4899725,4902557..4902678,4906671..4906855,4907300..4907333,4908018..4908074,4908157..4908218,4910686..4910804,4912336..4912439,4913189..4913239,4914738..4914811,4914897..4914961,4915116..4915159,4926032..4926098,4930466..4930705)
location: region:4878284-4930705:1
so has part: feature:4878284-4878575:1:exon
so has part: feature:4879829-4880003:1:exon
so has part: feature:4881855-4881995:1:exon
so has part: feature:4882322-4882393:1:exon
so has part: feature:4883115-4883166:1:exon
so has part: feature:4884063-4884245:1:exon
so has part: feature:4886507-4886614:1:exon
so has part: feature:4888119-4888274:1:exon
so has part: feature:4890310-4890410:1:exon
so has part: feature:4890838-4890979:1:exon
so has part: feature:4895080-4895150:1:exon
so has part: feature:4895545-4895720:1:exon
so has part: feature:4896861-4896994:1:exon
so has part: feature:4898191-4898301:1:exon
so has part: feature:4899524-4899725:1:exon
so has part: feature:4902557-4902678:1:exon
so has part: feature:4906671-4906855:1:exon
so has part: feature:4907300-4907333:1:exon
so has part: feature:4908018-4908074:1:exon
so has part: feature:4908157-4908218:1:exon
so has part: feature:4910686-4910804:1:exon
so has part: feature:4912336-4912439:1:exon
so has part: feature:4913189-4913239:1:exon
so has part: feature:4914738-4914811:1:exon
so has part: feature:4914897-4914961:1:exon
so has part: feature:4915116-4915159:1:exon
so has part: feature:4926032-4926098:1:exon
so has part: feature:4930466-4930705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4878284-4878575:1:exon

position:4878575:1
position: 4878575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4879829-4880003:1:exon

position:4879829:1
position: 4879829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4880003:1
position: 4880003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4881855-4881995:1:exon

position:4881855:1
position: 4881855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4881995:1
position: 4881995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4882322-4882393:1:exon

position:4882322:1
position: 4882322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4882393:1
position: 4882393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4883115-4883166:1:exon

position:4883115:1
position: 4883115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4883166:1
position: 4883166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4884063-4884245:1:exon

position:4884063:1
position: 4884063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4884245:1
position: 4884245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4886507-4886614:1:exon

position:4886507:1
position: 4886507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4886614:1
position: 4886614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4888119-4888274:1:exon

position:4888119:1
position: 4888119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4888274:1
position: 4888274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4890310-4890410:1:exon

position:4890310:1
position: 4890310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4890410:1
position: 4890410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4890838-4890979:1:exon

position:4890838:1
position: 4890838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4890979:1
position: 4890979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4895080-4895150:1:exon

position:4895080:1
position: 4895080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4895150:1
position: 4895150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4895545-4895720:1:exon

position:4895545:1
position: 4895545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4895720:1
position: 4895720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4896861-4896994:1:exon

position:4896861:1
position: 4896861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4896994:1
position: 4896994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4898191-4898301:1:exon

position:4898191:1
position: 4898191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4898301:1
position: 4898301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4899524-4899725:1:exon

position:4899524:1
position: 4899524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4899725:1
position: 4899725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4902557-4902678:1:exon

position:4902557:1
position: 4902557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4902678:1
position: 4902678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4906671-4906855:1:exon

position:4906671:1
position: 4906671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4906855:1
position: 4906855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4907300-4907333:1:exon

position:4907300:1
position: 4907300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4907333:1
position: 4907333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:4908018-4908074:1:exon

position:4908018:1
position: 4908018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4908074:1
position: 4908074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:4908157-4908218:1:exon

position:4908157:1
position: 4908157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4908218:1
position: 4908218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4910686-4910804:1:exon

position:4910686:1
position: 4910686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4910804:1
position: 4910804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:4912336-4912439:1:exon

position:4912336:1
position: 4912336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4912439:1
position: 4912439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:4913189-4913239:1:exon

position:4913189:1
position: 4913189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4913239:1
position: 4913239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:4914738-4914811:1:exon

position:4914738:1
position: 4914738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4914811:1
position: 4914811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:4914897-4914961:1:exon

position:4914897:1
position: 4914897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4914961:1
position: 4914961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:4915116-4915159:1:exon

position:4915116:1
position: 4915116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4915159:1
position: 4915159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:4926032-4926098:1:exon

position:4926032:1
position: 4926032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4926098:1
position: 4926098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:4930466-4930705:1:exon

position:4930466:1
position: 4930466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INTS8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INTS8
product: integrator complex subunit 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010976016.2
SIO_010081: INTS8
subclass of: SO_0000673
so part of: INTS8
location: join(4878285..4878575,4879829..4880003,4881855..4881995,4882322..4882393,4883115..4883166,4884063..4884245,4886507..4886614,4888119..4888274,4890310..4890410,4890838..4890979,4895080..4895150,4895545..4895720,4896861..4896994,4898191..4898301,4899524..4899725,4902557..4902678,4906671..4906855,4907300..4907333,4908018..4908074,4908157..4908218,4910686..4910804,4912336..4912439,4913189..4913239,4914738..4914811,4914897..4914961,4915116..4915159,4918348..4918549)
location: region:4878285-4918549:1
so has part: feature:4878285-4878575:1:exon
so has part: feature:4879829-4880003:1:exon
so has part: feature:4881855-4881995:1:exon
so has part: feature:4882322-4882393:1:exon
so has part: feature:4883115-4883166:1:exon
so has part: feature:4884063-4884245:1:exon
so has part: feature:4886507-4886614:1:exon
so has part: feature:4888119-4888274:1:exon
so has part: feature:4890310-4890410:1:exon
so has part: feature:4890838-4890979:1:exon
so has part: feature:4895080-4895150:1:exon
so has part: feature:4895545-4895720:1:exon
so has part: feature:4896861-4896994:1:exon
so has part: feature:4898191-4898301:1:exon
so has part: feature:4899524-4899725:1:exon
so has part: feature:4902557-4902678:1:exon
so has part: feature:4906671-4906855:1:exon
so has part: feature:4907300-4907333:1:exon
so has part: feature:4908018-4908074:1:exon
so has part: feature:4908157-4908218:1:exon
so has part: feature:4910686-4910804:1:exon
so has part: feature:4912336-4912439:1:exon
so has part: feature:4913189-4913239:1:exon
so has part: feature:4914738-4914811:1:exon
so has part: feature:4914897-4914961:1:exon
so has part: feature:4915116-4915159:1:exon
so has part: feature:4918348-4918549:1:exon

position:4878285:1
position: 4878285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4918549:1
position: 4918549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4878285-4878575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4879829-4880003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881855-4881995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4882322-4882393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4883115-4883166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4884063-4884245:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4886507-4886614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4888119-4888274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4890310-4890410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4890838-4890979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4895080-4895150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4895545-4895720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4896861-4896994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4898191-4898301:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4899524-4899725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4902557-4902678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4906671-4906855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4907300-4907333:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4908018-4908074:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4908157-4908218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4910686-4910804:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4912336-4912439:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4913189-4913239:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4914738-4914811:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4914897-4914961:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4915116-4915159:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4918348-4918549:1:exon

position:4918348:1
position: 4918348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INTS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 8 isoform X2
translation: MSAEAADREAATSSRPCTPPQTCWFEFLLEESLLEKHLRKPCPDPAPVQLIVQFLEQASKPSVNEQNQVQPPPDNKRNRILKLLALKVAAHLKWDLDILEKSLSVPVLNMLLNELLCISKVPPGTKHVDMDLDTLPPTTAMAILLYNRWAIRTIVQSSFPVKQAKPGPPQLSVMNQMQQEKELTENILKVLKEQASDSILVLEAALKLNKDLYVHTMRTLDFLAMEPGMVNGETESSTAGLKIKTEEMQCQVCYDLGAAYFQQGSTNSAVYENAREKFFRTKELIAEIGSLSLHCTIDEKRLAGYCQACDVLVPSSDSTSQQLTPYSQVHICLRSGNYQEVIKIFVEDNLTFSLPVQFRQSVLRELFQKAQQGNEALDEICFKVCACNTVRDILEGRTVSVPFNQLFLRPNKEKIDFLLEVCSRSINLEKASDSLKGNMAAFLKNVCLGLEDLQYVFMISSHELFITLLKDEERKLLVDQMRKRSPRVNLCIKPVTSFYDIPASASVNIGQLEHQLILSVDPWRIRQILIELHGMTSERQFWTVSNKWEVPSVYSGVILGIKDNLTRDLVYILMAKGLHCSTVKDFSHAKQLFAACLELVTEFSPKLRQVMLNEMLLLDIHTHEAGTGQSGERPPSDLISRVRGYLEMRLPDIPLRQVIAEECVAFMLNWRENEYLTLQVPALLLQSNPYVKLGQLLAATCKELPGPKESRRTAKDLWEVIVQICSVSSQHKRGNDGRVSLIKQRESTLGIMYRSELLSFIKKLREPLVLTIILSLFVKLHNVREDIVNDITAEHISIWPSSIPNLQSVDFEAVAITVKELVRYALSINPNNHSWLVIQADIYFATNQYSAALHYYLQAGAVCSDFFNKAVPPDVYTDQVIKRMIKCCSLLNCHTQVAILCQFLREIDYKTAFKSLQEQNSHDAMDSYYDYIWDVTILEYLTYLHHKRGETDKRQIAIHLLTMDDNFFFLFPDFY
SIO_010081: INTS8
subclass of: SO_0000673
so part of: INTS8
location: join(4878446..4878575,4879829..4880003,4881855..4881995,4882322..4882393,4883115..4883166,4884063..4884245,4886507..4886614,4888119..4888274,4890310..4890410,4890838..4890979,4895080..4895150,4895545..4895720,4896861..4896994,4898191..4898301,4899524..4899725,4902557..4902678,4906671..4906855,4907300..4907333,4908018..4908074,4908157..4908218,4910686..4910804,4912336..4912439,4913189..4913239,4914738..4914811,4914897..4914961,4915116..4915159,4926032..4926088)
location: region:4878446-4926088:1
so has part: feature:4878446-4878575:1:exon
so has part: feature:4879829-4880003:1:exon
so has part: feature:4881855-4881995:1:exon
so has part: feature:4882322-4882393:1:exon
so has part: feature:4883115-4883166:1:exon
so has part: feature:4884063-4884245:1:exon
so has part: feature:4886507-4886614:1:exon
so has part: feature:4888119-4888274:1:exon
so has part: feature:4890310-4890410:1:exon
so has part: feature:4890838-4890979:1:exon
so has part: feature:4895080-4895150:1:exon
so has part: feature:4895545-4895720:1:exon
so has part: feature:4896861-4896994:1:exon
so has part: feature:4898191-4898301:1:exon
so has part: feature:4899524-4899725:1:exon
so has part: feature:4902557-4902678:1:exon
so has part: feature:4906671-4906855:1:exon
so has part: feature:4907300-4907333:1:exon
so has part: feature:4908018-4908074:1:exon
so has part: feature:4908157-4908218:1:exon
so has part: feature:4910686-4910804:1:exon
so has part: feature:4912336-4912439:1:exon
so has part: feature:4913189-4913239:1:exon
so has part: feature:4914738-4914811:1:exon
so has part: feature:4914897-4914961:1:exon
so has part: feature:4915116-4915159:1:exon
so has part: feature:4926032-4926088:1:exon

XP_031295203.1
type: Protein
SIO_000068: ncbiprotein

position:4878446:1
position: 4878446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4926088:1
position: 4926088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4878446-4878575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4879829-4880003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881855-4881995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4882322-4882393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4883115-4883166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4884063-4884245:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4886507-4886614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4888119-4888274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4890310-4890410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4890838-4890979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4895080-4895150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4895545-4895720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4896861-4896994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4898191-4898301:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4899524-4899725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4902557-4902678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4906671-4906855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4907300-4907333:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4908018-4908074:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4908157-4908218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4910686-4910804:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4912336-4912439:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4913189-4913239:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4914738-4914811:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4914897-4914961:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4915116-4915159:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4926032-4926088:1:exon

INTS8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INTS8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: integrator complex subunit 8 isoform X1
translation: MSAEAADREAATSSRPCTPPQTCWFEFLLEESLLEKHLRKPCPDPAPVQLIVQFLEQASKPSVNEQNQVQPPPDNKRNRILKLLALKVAAHLKWDLDILEKSLSVPVLNMLLNELLCISKVPPGTKHVDMDLDTLPPTTAMAILLYNRWAIRTIVQSSFPVKQAKPGPPQLSVMNQMQQEKELTENILKVLKEQASDSILVLEAALKLNKDLYVHTMRTLDFLAMEPGMVNGETESSTAGLKIKTEEMQCQVCYDLGAAYFQQGSTNSAVYENAREKFFRTKELIAEIGSLSLHCTIDEKRLAGYCQACDVLVPSSDSTSQQLTPYSQVHICLRSGNYQEVIKIFVEDNLTFSLPVQFRQSVLRELFQKAQQGNEALDEICFKVCACNTVRDILEGRTVSVPFNQLFLRPNKEKIDFLLEVCSRSINLEKASDSLKGNMAAFLKNVCLGLEDLQYVFMISSHELFITLLKDEERKLLVDQMRKRSPRVNLCIKPVTSFYDIPASASVNIGQLEHQLILSVDPWRIRQILIELHGMTSERQFWTVSNKWEVPSVYSGVILGIKDNLTRDLVYILMAKGLHCSTVKDFSHAKQLFAACLELVTEFSPKLRQVMLNEMLLLDIHTHEAGTGQSGERPPSDLISRVRGYLEMRLPDIPLRQVIAEECVAFMLNWRENEYLTLQVPALLLQSNPYVKLGQLLAATCKELPGPKESRRTAKDLWEVIVQICSVSSQHKRGNDGRVSLIKQRESTLGIMYRSELLSFIKKLREPLVLTIILSLFVKLHNVREDIVNDITAEHISIWPSSIPNLQSVDFEAVAITVKELVRYALSINPNNHSWLVIQADIYFATNQYSAALHYYLQAGAVCSDFFNKAVPPDVYTDQVIKRMIKCCSLLNCHTQVAILCQFLREIDYKTAFKSLQEQNSHDAMDSYYDYIWDVTILEYLTYLHHKRGETDKRQIAIKAIGQTELNASNPEEVLQLAAQRRKKKFLQAMAKLYF
SIO_010081: INTS8
subclass of: SO_0000673
so part of: INTS8
location: join(4878446..4878575,4879829..4880003,4881855..4881995,4882322..4882393,4883115..4883166,4884063..4884245,4886507..4886614,4888119..4888274,4890310..4890410,4890838..4890979,4895080..4895150,4895545..4895720,4896861..4896994,4898191..4898301,4899524..4899725,4902557..4902678,4906671..4906855,4907300..4907333,4908018..4908074,4908157..4908218,4910686..4910804,4912336..4912439,4913189..4913239,4914738..4914811,4914897..4914961,4915116..4915159,4918348..4918464)
location: region:4878446-4918464:1
so has part: feature:4878446-4878575:1:exon
so has part: feature:4879829-4880003:1:exon
so has part: feature:4881855-4881995:1:exon
so has part: feature:4882322-4882393:1:exon
so has part: feature:4883115-4883166:1:exon
so has part: feature:4884063-4884245:1:exon
so has part: feature:4886507-4886614:1:exon
so has part: feature:4888119-4888274:1:exon
so has part: feature:4890310-4890410:1:exon
so has part: feature:4890838-4890979:1:exon
so has part: feature:4895080-4895150:1:exon
so has part: feature:4895545-4895720:1:exon
so has part: feature:4896861-4896994:1:exon
so has part: feature:4898191-4898301:1:exon
so has part: feature:4899524-4899725:1:exon
so has part: feature:4902557-4902678:1:exon
so has part: feature:4906671-4906855:1:exon
so has part: feature:4907300-4907333:1:exon
so has part: feature:4908018-4908074:1:exon
so has part: feature:4908157-4908218:1:exon
so has part: feature:4910686-4910804:1:exon
so has part: feature:4912336-4912439:1:exon
so has part: feature:4913189-4913239:1:exon
so has part: feature:4914738-4914811:1:exon
so has part: feature:4914897-4914961:1:exon
so has part: feature:4915116-4915159:1:exon
so has part: feature:4918348-4918464:1:exon

XP_010974318.2
type: Protein
SIO_000068: ncbiprotein

position:4918464:1
position: 4918464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4878446-4878575:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4879829-4880003:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4881855-4881995:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4882322-4882393:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4883115-4883166:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4884063-4884245:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4886507-4886614:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4888119-4888274:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4890310-4890410:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4890838-4890979:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4895080-4895150:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4895545-4895720:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4896861-4896994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4898191-4898301:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4899524-4899725:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4902557-4902678:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4906671-4906855:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4907300-4907333:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4908018-4908074:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4908157-4908218:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4910686-4910804:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4912336-4912439:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4913189-4913239:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4914738-4914811:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4914897-4914961:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4915116-4915159:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4918348-4918464:1:exon

CCNE2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CCNE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4918473..4931441)
location: region:4918473-4931441:-1
so has part: feature:4918473-4931441:-1:exon
subclass of: SO_0000010

105085741
type: Gene
SIO_000068: ncbigene

position:4918473:-1
position: 4918473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4931441:-1
position: 4931441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4918473-4931441:-1:exon

CCNE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCNE2
product: cyclin E2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_010976015.2
SIO_010081: CCNE2
subclass of: SO_0000673
so part of: CCNE2
location: complement(join(4918473..4919990,4920423..4920580,4921101..4921212,4922872..4923006,4924311..4924406,4925645..4925791,4927774..4927909,4928853..4929004,4930113..4930169,4930248..4930344,4930439..4930478,4931421..4931441))
location: region:4918473-4931441:-1
so has part: feature:4931421-4931441:-1:exon
so has part: feature:4930439-4930478:-1:exon
so has part: feature:4930248-4930344:-1:exon
so has part: feature:4930113-4930169:-1:exon
so has part: feature:4928853-4929004:-1:exon
so has part: feature:4927774-4927909:-1:exon
so has part: feature:4925645-4925791:-1:exon
so has part: feature:4924311-4924406:-1:exon
so has part: feature:4922872-4923006:-1:exon
so has part: feature:4921101-4921212:-1:exon
so has part: feature:4920423-4920580:-1:exon
so has part: feature:4918473-4919990:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4931421-4931441:-1:exon

position:4931421:-1
position: 4931421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4930439-4930478:-1:exon

position:4930439:-1
position: 4930439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4930478:-1
position: 4930478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4930248-4930344:-1:exon

position:4930248:-1
position: 4930248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4930344:-1
position: 4930344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4930113-4930169:-1:exon

position:4930113:-1
position: 4930113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4930169:-1
position: 4930169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4928853-4929004:-1:exon

position:4928853:-1
position: 4928853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4929004:-1
position: 4929004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4927774-4927909:-1:exon

position:4927774:-1
position: 4927774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4927909:-1
position: 4927909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4925645-4925791:-1:exon

position:4925645:-1
position: 4925645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4925791:-1
position: 4925791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4924311-4924406:-1:exon

position:4924311:-1
position: 4924311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4924406:-1
position: 4924406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4922872-4923006:-1:exon

position:4922872:-1
position: 4922872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4923006:-1
position: 4923006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4921101-4921212:-1:exon

position:4921101:-1
position: 4921101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4921212:-1
position: 4921212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4920423-4920580:-1:exon

position:4920423:-1
position: 4920423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4920580:-1
position: 4920580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4918473-4919990:-1:exon

position:4919990:-1
position: 4919990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCNE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCNE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G1/S-specific cyclin-E2
translation: MSRRSSRLQAKQQPQPSQTDSPQEAQIIQAKKRKTAQDVRKRKEEKVTKKHQYEIRNCWPPVLSGGISPCIIIETPHKELGTSDFSRFTNYRFKNLFINPSPLPDLSWGCSKDVWLNMLNKETRYVHDKHFEVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDINKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEEDILRMELIILKALKWELGPVTVISWLNLFLQVDALKDAPKVLLPQYSQEKFIQIAQLLDLCILAIDSLEFQYRILAAAALCHFTSIEVVKKASGLEWDSISECVEWMEPFVSVVKSTSPVKLKIFKKISMEDRHNIQTHTNYLTMLDEVNYVNTFRKGGQLSPVCNGGIMTPPKSTEKPPGKH
SIO_010081: CCNE2
subclass of: SO_0000673
so part of: CCNE2
location: complement(join(4919877..4919990,4920423..4920580,4921101..4921212,4922872..4923006,4924311..4924406,4925645..4925791,4927774..4927909,4928853..4929004,4930113..4930169,4930248..4930344,4930439..4930452))
location: region:4919877-4930452:-1
so has part: feature:4930439-4930452:-1:exon
so has part: feature:4930248-4930344:-1:exon
so has part: feature:4930113-4930169:-1:exon
so has part: feature:4928853-4929004:-1:exon
so has part: feature:4927774-4927909:-1:exon
so has part: feature:4925645-4925791:-1:exon
so has part: feature:4924311-4924406:-1:exon
so has part: feature:4922872-4923006:-1:exon
so has part: feature:4921101-4921212:-1:exon
so has part: feature:4920423-4920580:-1:exon
so has part: feature:4919877-4919990:-1:exon

XP_010974317.2
type: Protein
SIO_000068: ncbiprotein

position:4919877:-1
position: 4919877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4930452:-1
position: 4930452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4930439-4930452:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4930248-4930344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4930113-4930169:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4928853-4929004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4927774-4927909:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4925645-4925791:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4924311-4924406:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4922872-4923006:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4921101-4921212:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4920423-4920580:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4919877-4919990:-1:exon

LOC116148894
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148894
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4967408..4978598)
location: region:4967408-4978598:-1
so has part: feature:4967408-4978598:-1:exon
subclass of: SO_0000011

116148894
type: Gene
SIO_000068: ncbigene

position:4967408:-1
position: 4967408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4978598:-1
position: 4978598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4967408-4978598:-1:exon

LOC116148894
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148894
product: uncharacterized LOC116148894
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132469.1
SIO_010081: LOC116148894
subclass of: SO_0000673
so part of: LOC116148894
location: complement(join(4967408..4968917,4977192..4977332,4978005..4978598))
location: region:4967408-4978598:-1
so has part: feature:4978005-4978598:-1:exon
so has part: feature:4977192-4977332:-1:exon
so has part: feature:4967408-4968917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4978005-4978598:-1:exon

position:4978005:-1
position: 4978005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4977192-4977332:-1:exon

position:4977192:-1
position: 4977192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4977332:-1
position: 4977332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4967408-4968917:-1:exon

position:4968917:-1
position: 4968917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TP53INP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TP53INP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4980194..4989781)
location: region:4980194-4989781:-1
so has part: feature:4980194-4989781:-1:exon
subclass of: SO_0000010

105085743
type: Gene
SIO_000068: ncbigene

position:4980194:-1
position: 4980194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4989781:-1
position: 4989781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4980194-4989781:-1:exon

TP53INP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TP53INP1
product: tumor protein p53 inducible nuclear protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_010976018.2
SIO_010081: TP53INP1
subclass of: SO_0000673
so part of: TP53INP1
location: complement(join(4980194..4985107,4988736..4989096,4989638..4989781))
location: region:4980194-4989781:-1
so has part: feature:4989638-4989781:-1:exon
so has part: feature:4988736-4989096:-1:exon
so has part: feature:4980194-4985107:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4989638-4989781:-1:exon

position:4989638:-1
position: 4989638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4988736-4989096:-1:exon

position:4988736:-1
position: 4988736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4989096:-1
position: 4989096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4980194-4985107:-1:exon

position:4985107:-1
position: 4985107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TP53INP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TP53INP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible nuclear protein 1 isoform X1
translation: MFQRLNKMFVGEVSTSSNREPEFSEKEDDEWILVDFIDTCTGFSAVEDEEEEDVSEESPAEHPSVFSCLPASLDCLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPMENLLIEHPSMSVYAVHNSCPSLSEARCGTEEFHNPSSPRVEAENEVGQHIHCYVAALAAHTAFLEQPKSFRPSQWIKEHSERQSLNRNSLRRQNLTRDCHSRPVKHSGWAVHQPCPRQYNY
SIO_010081: TP53INP1
subclass of: SO_0000673
so part of: TP53INP1
location: complement(join(4984858..4985107,4988736..4989096,4989638..4989749))
location: region:4984858-4989749:-1
so has part: feature:4989638-4989749:-1:exon
so has part: feature:4988736-4989096:-1:exon
so has part: feature:4984858-4985107:-1:exon

XP_010974320.1
type: Protein
SIO_000068: ncbiprotein

position:4984858:-1
position: 4984858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4989749:-1
position: 4989749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4989638-4989749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4988736-4989096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4984858-4985107:-1:exon

TP53INP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TP53INP1
product: tumor protein p53 inducible nuclear protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010976021.2
SIO_010081: TP53INP1
subclass of: SO_0000673
so part of: TP53INP1
location: complement(join(4984973..4985107,4986223..4986260,4988736..4989096,4989638..4989781))
location: region:4984973-4989781:-1
so has part: feature:4989638-4989781:-1:exon
so has part: feature:4988736-4989096:-1:exon
so has part: feature:4986223-4986260:-1:exon
so has part: feature:4984973-4985107:-1:exon

position:4984973:-1
position: 4984973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4989638-4989781:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4988736-4989096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4986223-4986260:-1:exon

position:4986223:-1
position: 4986223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4986260:-1
position: 4986260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4984973-4985107:-1:exon

TP53INP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TP53INP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor protein p53-inducible nuclear protein 1 isoform X2
translation: MFQRLNKMFVGEVSTSSNREPEFSEKEDDEWILVDFIDTCTGFSAVEDEEEEDVSEESPAEHPSVFSCLPASLDCLADTSDSCFLQFESCPMEESWFITPPPCFTAGGLTTIKVETSPMENLLIEHPSMSVYAVHNSCPSLSEARCGTEEFHNPSSPRARKSCL
SIO_010081: TP53INP1
subclass of: SO_0000673
so part of: TP53INP1
location: complement(join(4986239..4986260,4988736..4989096,4989638..4989749))
location: region:4986239-4989749:-1
so has part: feature:4989638-4989749:-1:exon
so has part: feature:4988736-4989096:-1:exon
so has part: feature:4986239-4986260:-1:exon

XP_010974323.1
type: Protein
SIO_000068: ncbiprotein

position:4986239:-1
position: 4986239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4989638-4989749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4988736-4989096:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4986239-4986260:-1:exon

LOC105085745
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105085745
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5028903..5064018)
location: region:5028903-5064018:-1
so has part: feature:5028903-5064018:-1:exon
subclass of: SO_0000011

105085745
type: Gene
SIO_000068: ncbigene

position:5028903:-1
position: 5028903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5064018:-1
position: 5064018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5028903-5064018:-1:exon

LOC105085745
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105085745
product: uncharacterized LOC105085745
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_004132470.1
SIO_010081: LOC105085745
subclass of: SO_0000673
so part of: LOC105085745
location: complement(join(5028903..5030379,5032148..5032221,5063785..5064018))
location: region:5028903-5064018:-1
so has part: feature:5063785-5064018:-1:exon
so has part: feature:5032148-5032221:-1:exon
so has part: feature:5028903-5030379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5063785-5064018:-1:exon

position:5063785:-1
position: 5063785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5032148-5032221:-1:exon

position:5032148:-1
position: 5032148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5032221:-1
position: 5032221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5028903-5030379:-1:exon

position:5030379:-1
position: 5030379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFAF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NDUFAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5064002..5093102
location: region:5064002-5093102:1
so has part: feature:5064002-5093102:1:exon
subclass of: SO_0000010

105085756
type: Gene
SIO_000068: ncbigene

position:5064002:1
position: 5064002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5093102:1
position: 5093102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5064002-5093102:1:exon

NDUFAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NDUFAF6
product: NADH:ubiquinone oxidoreductase complex assembly factor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031439344.1
SIO_010081: NDUFAF6
subclass of: SO_0000673
so part of: NDUFAF6
location: join(5064002..5064254,5068443..5068542,5076122..5076244,5080272..5080328,5081882..5081984,5083595..5083728,5084393..5084494,5087415..5087471,5089700..5093102)
location: region:5064002-5093102:1
so has part: feature:5064002-5064254:1:exon
so has part: feature:5068443-5068542:1:exon
so has part: feature:5076122-5076244:1:exon
so has part: feature:5080272-5080328:1:exon
so has part: feature:5081882-5081984:1:exon
so has part: feature:5083595-5083728:1:exon
so has part: feature:5084393-5084494:1:exon
so has part: feature:5087415-5087471:1:exon
so has part: feature:5089700-5093102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5064002-5064254:1:exon

position:5064254:1
position: 5064254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5068443-5068542:1:exon

position:5068443:1
position: 5068443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5068542:1
position: 5068542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5076122-5076244:1:exon

position:5076122:1
position: 5076122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5076244:1
position: 5076244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5080272-5080328:1:exon

position:5080272:1
position: 5080272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5080328:1
position: 5080328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5081882-5081984:1:exon

position:5081882:1
position: 5081882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5081984:1
position: 5081984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5083595-5083728:1:exon

position:5083595:1
position: 5083595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5083728:1
position: 5083728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5084393-5084494:1:exon

position:5084393:1
position: 5084393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5084494:1
position: 5084494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5087415-5087471:1:exon

position:5087415:1
position: 5087415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5087471:1
position: 5087471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5089700-5093102:1:exon

position:5089700:1
position: 5089700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NDUFAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NDUFAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X1
translation: MAASTLGSAWGPLRLGVPGLCSRRPPQGLWVRARRLPEPAGSGRSVAAASGPDASGTDRYCLELLRKRDYEGYLCSLLLPAESRSSAFALRAFNVELAQVKDSVSEKTIGLMRIQFWKKTVDDIYCDNPPHQPVAIELWKAVRRHNLTKRWLMKIIDEREKNLDDKPYRNIQELEDYGENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDVCVLHGVSQEDFLRKSQDKNVRDVVYDVASQAHLHLKHARSFHKSVPVKAFPAFLQTVALEDYLKKIQKVDFDIFHPSLQQKNALLPLSLYIQSWRKRY
SIO_010081: NDUFAF6
subclass of: SO_0000673
so part of: NDUFAF6
location: join(5064058..5064254,5068443..5068542,5076122..5076244,5080272..5080328,5081882..5081984,5083595..5083728,5084393..5084494,5087415..5087471,5089700..5089828)
location: region:5064058-5089828:1
so has part: feature:5064058-5064254:1:exon
so has part: feature:5068443-5068542:1:exon
so has part: feature:5076122-5076244:1:exon
so has part: feature:5080272-5080328:1:exon
so has part: feature:5081882-5081984:1:exon
so has part: feature:5083595-5083728:1:exon
so has part: feature:5084393-5084494:1:exon
so has part: feature:5087415-5087471:1:exon
so has part: feature:5089700-5089828:1:exon

XP_031295204.1
type: Protein
SIO_000068: ncbiprotein

position:5064058:1
position: 5064058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5089828:1
position: 5089828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5064058-5064254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5068443-5068542:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5076122-5076244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5080272-5080328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5081882-5081984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5083595-5083728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5084393-5084494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5087415-5087471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5089700-5089828:1:exon

NDUFAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NDUFAF6
product: NADH:ubiquinone oxidoreductase complex assembly factor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_031439345.1
SIO_010081: NDUFAF6
subclass of: SO_0000673
so part of: NDUFAF6
location: join(5064116..5064254,5068443..5068546,5076122..5076244,5080272..5080328,5081882..5081984,5083595..5083728,5084393..5084494,5087415..5087471,5089700..5093102)
location: region:5064116-5093102:1
so has part: feature:5064116-5064254:1:exon
so has part: feature:5068443-5068546:1:exon
so has part: feature:5076122-5076244:1:exon
so has part: feature:5080272-5080328:1:exon
so has part: feature:5081882-5081984:1:exon
so has part: feature:5083595-5083728:1:exon
so has part: feature:5084393-5084494:1:exon
so has part: feature:5087415-5087471:1:exon
so has part: feature:5089700-5093102:1:exon

position:5064116:1
position: 5064116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5064116-5064254:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5068443-5068546:1:exon

position:5068546:1
position: 5068546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5076122-5076244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5080272-5080328:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5081882-5081984:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5083595-5083728:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5084393-5084494:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5087415-5087471:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5089700-5093102:1:exon

NDUFAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NDUFAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X2
translation: MWNWLRLVKDSVSEKTIGLMRIQFWKKTVDDIYCDNPPHQPVAIELWKAVRRHNLTKRWLMKIIDEREKNLDDKPYRNIQELEDYGENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDVCVLHGVSQEDFLRKSQDKNVRDVVYDVASQAHLHLKHARSFHKSVPVKAFPAFLQTVALEDYLKKIQKVDFDIFHPSLQQKNALLPLSLYIQSWRKRY
SIO_010081: NDUFAF6
subclass of: SO_0000673
so part of: NDUFAF6
location: join(5068526..5068546,5076122..5076244,5080272..5080328,5081882..5081984,5083595..5083728,5084393..5084494,5087415..5087471,5089700..5089828)
location: region:5068526-5089828:1
so has part: feature:5068526-5068546:1:exon
so has part: feature:5076122-5076244:1:exon
so has part: feature:5080272-5080328:1:exon
so has part: feature:5081882-5081984:1:exon
so has part: feature:5083595-5083728:1:exon
so has part: feature:5084393-5084494:1:exon
so has part: feature:5087415-5087471:1:exon
so has part: feature:5089700-5089828:1:exon

XP_031295205.1
type: Protein
SIO_000068: ncbiprotein

position:5068526:1
position: 5068526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5068526-5068546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5076122-5076244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5080272-5080328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5081882-5081984:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5083595-5083728:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5084393-5084494:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5087415-5087471:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5089700-5089828:1:exon

NDUFAF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NDUFAF6
product: NADH:ubiquinone oxidoreductase complex assembly factor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031439346.1
SIO_010081: NDUFAF6
subclass of: SO_0000673
so part of: NDUFAF6
location: join(5076850..5077108,5080272..5080328,5081882..5081984,5083595..5083728,5084393..5084494,5087415..5087471,5089700..5093102)
location: region:5076850-5093102:1
so has part: feature:5076850-5077108:1:exon
so has part: feature:5080272-5080328:1:exon
so has part: feature:5081882-5081984:1:exon
so has part: feature:5083595-5083728:1:exon
so has part: feature:5084393-5084494:1:exon
so has part: feature:5087415-5087471:1:exon
so has part: feature:5089700-5093102:1:exon

position:5076850:1
position: 5076850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5076850-5077108:1:exon

position:5077108:1
position: 5077108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5080272-5080328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5081882-5081984:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5083595-5083728:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5084393-5084494:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5087415-5087471:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5089700-5093102:1:exon

NDUFAF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NDUFAF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 isoform X3
translation: MKIIDEREKNLDDKPYRNIQELEDYGENTQSSLLYLTLEILGIKDLHADHAASHIGKAQGIVTCLRATPYHGSRRRVFLPMDVCVLHGVSQEDFLRKSQDKNVRDVVYDVASQAHLHLKHARSFHKSVPVKAFPAFLQTVALEDYLKKIQKVDFDIFHPSLQQKNALLPLSLYIQSWRKRY
SIO_010081: NDUFAF6
subclass of: SO_0000673
so part of: NDUFAF6
location: join(5080308..5080328,5081882..5081984,5083595..5083728,5084393..5084494,5087415..5087471,5089700..5089828)
location: region:5080308-5089828:1
so has part: feature:5080308-5080328:1:exon
so has part: feature:5081882-5081984:1:exon
so has part: feature:5083595-5083728:1:exon
so has part: feature:5084393-5084494:1:exon
so has part: feature:5087415-5087471:1:exon
so has part: feature:5089700-5089828:1:exon

XP_031295206.1
type: Protein
SIO_000068: ncbiprotein

position:5080308:1
position: 5080308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5080308-5080328:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5081882-5081984:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5083595-5083728:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5084393-5084494:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5087415-5087471:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5089700-5089828:1:exon

LOC116149049
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149049
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5085388..5085521
location: region:5085388-5085521:1
so has part: feature:5085388-5085521:1:exon
subclass of: SO_0000578

116149049
type: Gene
SIO_000068: ncbigene

position:5085388:1
position: 5085388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5085521:1
position: 5085521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5085388-5085521:1:exon

LOC116149049
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116149049
product: small nucleolar RNA SNORA14
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00397
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132686.1
SIO_010081: LOC116149049
subclass of: SO_0000673
so part of: LOC116149049
location: 5085388..5085521
location: region:5085388-5085521:1
so has part: feature:5085388-5085521:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5085388-5085521:1:exon

TRNAA-AGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-AGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5095307..5095378
location: region:5095307-5095378:1
so has part: feature:5095307-5095378:1:exon
subclass of: SO_0000663

116149080
type: Gene
SIO_000068: ncbigene

position:5095307:1
position: 5095307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5095378:1
position: 5095378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5095307-5095378:1:exon

TRNAA-AGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-AGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon AGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5095339..5095341,aa:Ala,seq:agc)
SIO_010081: TRNAA-AGC
subclass of: SO_0000673
so part of: TRNAA-AGC
location: 5095307..5095378
location: region:5095307-5095378:1
so has part: feature:5095307-5095378:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5095307-5095378:1:exon

PLEKHF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PLEKHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5140747..5160660
location: region:5140747-5160660:1
so has part: feature:5140747-5160660:1:exon
subclass of: SO_0000010

105085746
type: Gene
SIO_000068: ncbigene

position:5140747:1
position: 5140747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5160660:1
position: 5160660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5140747-5160660:1:exon

PLEKHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PLEKHF2
product: pleckstrin homology and FYVE domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031439349.1
SIO_010081: PLEKHF2
subclass of: SO_0000673
so part of: PLEKHF2
location: join(5140747..5140879,5155125..5155184,5158033..5160660)
location: region:5140747-5160660:1
so has part: feature:5140747-5140879:1:exon
so has part: feature:5155125-5155184:1:exon
so has part: feature:5158033-5160660:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5140747-5140879:1:exon

position:5140879:1
position: 5140879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5155125-5155184:1:exon

position:5155125:1
position: 5155125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5155184:1
position: 5155184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5158033-5160660:1:exon

position:5158033:1
position: 5158033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLEKHF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PLEKHF2
product: pleckstrin homology and FYVE domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_031439348.1
SIO_010081: PLEKHF2
subclass of: SO_0000673
so part of: PLEKHF2
location: join(5140749..5140879,5158033..5160660)
location: region:5140749-5160660:1
so has part: feature:5140749-5140879:1:exon
so has part: feature:5158033-5160660:1:exon

position:5140749:1
position: 5140749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5140749-5140879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5158033-5160660:1:exon

PLEKHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PLEKHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family F member 2
translation: MVDRLANSEANTRRINIVENCFGAAGQPLTIPGRVLIGEGVLTKLCRKKPKARQFFLFNDILVYGNIVIQKKKYNKQHIIPLENVTIDSIKDEGDLRNGWLIKTPTKSFAVYAATATEKSEWMNHINKCVTDLLSKSGKTPSNEHAAVWVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFLLPSQSSKPVRICDFCYDLLSAGDMATCQPARSDSYSQSLKSPLNDVSDDDDDDDSSD
SIO_010081: PLEKHF2
subclass of: SO_0000673
so part of: PLEKHF2
location: 5158047..5158796
location: region:5158047-5158796:1
so has part: feature:5158047-5158796:1:exon

XP_031295208.1
type: Protein
SIO_000068: ncbiprotein

position:5158047:1
position: 5158047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5158796:1
position: 5158796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5158047-5158796:1:exon

PLEKHF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PLEKHF2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pleckstrin homology domain-containing family F member 2
translation: MVDRLANSEANTRRINIVENCFGAAGQPLTIPGRVLIGEGVLTKLCRKKPKARQFFLFNDILVYGNIVIQKKKYNKQHIIPLENVTIDSIKDEGDLRNGWLIKTPTKSFAVYAATATEKSEWMNHINKCVTDLLSKSGKTPSNEHAAVWVPDSEATVCMRCQKAKFTPVNRRHHCRKCGFVVCGPCSEKRFLLPSQSSKPVRICDFCYDLLSAGDMATCQPARSDSYSQSLKSPLNDVSDDDDDDDSSD
SIO_010081: PLEKHF2
subclass of: SO_0000673
so part of: PLEKHF2
location: 5158047..5158796
location: region:5158047-5158796:1
so has part: feature:5158047-5158796:1:exon

XP_031295209.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5158047-5158796:1:exon

LOC116149020
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5166434..5176268)
location: region:5166434-5176268:-1
so has part: feature:5166434-5176268:-1:exon
subclass of: SO_0000011

116149020
type: Gene
SIO_000068: ncbigene

position:5166434:-1
position: 5166434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5176268:-1
position: 5176268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5166434-5176268:-1:exon

LOC116149020
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149020
product: uncharacterized LOC116149020
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132660.1
SIO_010081: LOC116149020
subclass of: SO_0000673
so part of: LOC116149020
location: complement(join(5166434..5166445,5166830..5166836,5176209..5176268))
location: region:5166434-5176268:-1
so has part: feature:5176209-5176268:-1:exon
so has part: feature:5166830-5166836:-1:exon
so has part: feature:5166434-5166445:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5176209-5176268:-1:exon

position:5176209:-1
position: 5176209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5166830-5166836:-1:exon

position:5166830:-1
position: 5166830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5166836:-1
position: 5166836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5166434-5166445:-1:exon

position:5166445:-1
position: 5166445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105085747
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105085747
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5215569..5234631
location: region:5215569-5234631:1
so has part: feature:5215569-5234631:1:exon
subclass of: SO_0000011

105085747
type: Gene
SIO_000068: ncbigene

position:5215569:1
position: 5215569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5234631:1
position: 5234631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5215569-5234631:1:exon

LOC105085747
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105085747
product: uncharacterized LOC105085747, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_836856.2
SIO_010081: LOC105085747
subclass of: SO_0000673
so part of: LOC105085747
location: join(5215569..5215699,5226340..5226629,5232105..5232166,5233139..5234631)
location: region:5215569-5234631:1
so has part: feature:5215569-5215699:1:exon
so has part: feature:5226340-5226629:1:exon
so has part: feature:5232105-5232166:1:exon
so has part: feature:5233139-5234631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5215569-5215699:1:exon

position:5215699:1
position: 5215699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5226340-5226629:1:exon

position:5226340:1
position: 5226340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5226629:1
position: 5226629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5232105-5232166:1:exon

position:5232105:1
position: 5232105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5232166:1
position: 5232166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5233139-5234631:1:exon

position:5233139:1
position: 5233139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105085747
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105085747
product: uncharacterized LOC105085747, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_836855.2
SIO_010081: LOC105085747
subclass of: SO_0000673
so part of: LOC105085747
location: join(5215569..5215699,5226340..5226629,5232105..5232166,5233196..5234630)
location: region:5215569-5234630:1
so has part: feature:5215569-5215699:1:exon
so has part: feature:5226340-5226629:1:exon
so has part: feature:5232105-5232166:1:exon
so has part: feature:5233196-5234630:1:exon

position:5234630:1
position: 5234630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5215569-5215699:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5226340-5226629:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5232105-5232166:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5233196-5234630:1:exon

position:5233196:1
position: 5233196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

C25H8orf37
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5235525..5261045)
location: region:5235525-5261045:-1
so has part: feature:5235525-5261045:-1:exon
subclass of: SO_0000010

105085748
type: Gene
SIO_000068: ncbigene

position:5235525:-1
position: 5235525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261045:-1
position: 5261045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5235525-5261045:-1:exon

C25H8orf37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf37
product: chromosome 25 C8orf37 homolog, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_010976025.2
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5235525..5237769,5242421..5242516,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5261045))
location: region:5235525-5261045:-1
so has part: feature:5260782-5261045:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5235525-5237769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5261045:-1:exon

position:5260782:-1
position: 5260782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

position:5255999:-1
position: 5255999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5256086:-1
position: 5256086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

position:5250232:-1
position: 5250232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5250296:-1
position: 5250296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

position:5249670:-1
position: 5249670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5249735:-1
position: 5249735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242516:-1:exon

position:5242421:-1
position: 5242421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5242516:-1
position: 5242516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5235525-5237769:-1:exon

position:5237769:-1
position: 5237769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C25H8orf37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf37
product: chromosome 25 C8orf37 homolog, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_010976024.2
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5235525..5237769,5242421..5242534,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5261045))
location: region:5235525-5261045:-1
so has part: feature:5260782-5261045:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242534:-1:exon
so has part: feature:5235525-5237769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5261045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242534:-1:exon

position:5242534:-1
position: 5242534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5235525-5237769:-1:exon

C25H8orf37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf37
product: chromosome 25 C8orf37 homolog, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031439353.1
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5235525..5237769,5242421..5242516,5247350..5247391,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5261045))
location: region:5235525-5261045:-1
so has part: feature:5260782-5261045:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5247350-5247391:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5235525-5237769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5261045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5247350-5247391:-1:exon

position:5247350:-1
position: 5247350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5247391:-1
position: 5247391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5235525-5237769:-1:exon

C25H8orf37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C8orf37 homolog isoform X6
translation: MAEDLDELLDEVESKFCSPDPLRLDMVERPRGGGGVLSNDRNRAEAKENLRSTEAFKKEDDLDSLINEIFEEPNFDKKHFKLKSKSSGNTSVRASIRGLGKSCSPVYLGGSAVPCGIGTNTSQRACDRLRCVACDFWVVSYDDHRWDRSCDYLFFRNNMPEFHKLKTKLVKKKGTRAYACQCSWRTIEDLTDLQTDHQLHWVCGKH
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237616..5237769,5242421..5242516,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5260933))
location: region:5237616-5260933:-1
so has part: feature:5260782-5260933:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5237616-5237769:-1:exon

XP_010974327.1
type: Protein
SIO_000068: ncbiprotein

position:5237616:-1
position: 5237616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5260933:-1
position: 5260933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5260933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5237616-5237769:-1:exon

C25H8orf37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C8orf37 homolog isoform X5
translation: MAEDLDELLDEVESKFCSPDPLRLDMVERPRGGGGVLSNDRNRAEAKENLRSTEAFKKEDDLDSLINEIFEEPNFDKKHFKLKSKSSGNTSVRASIRGLGKSCSPVYLGGSAVPCGIGTNTSQRAFSLTRACDRLRCVACDFWVVSYDDHRWDRSCDYLFFRNNMPEFHKLKTKLVKKKGTRAYACQCSWRTIEDLTDLQTDHQLHWVCGKH
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237616..5237769,5242421..5242534,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5260933))
location: region:5237616-5260933:-1
so has part: feature:5260782-5260933:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242534:-1:exon
so has part: feature:5237616-5237769:-1:exon

XP_010974326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5260933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5237616-5237769:-1:exon

C25H8orf37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C8orf37 homolog isoform X4
translation: MAEDLDELLDEVESKFCSPDPLRLDMVERPRGGGGVLSNDRNRAEAKENLRSTEAFKKEDDLDSLINEIFEEPNFDKKHFKLKSKSSGNTSVRASIRGLGKSCSPVYLGGSAVPCGIGTNTSQRDKKGKHMEFAYMHRACDRLRCVACDFWVVSYDDHRWDRSCDYLFFRNNMPEFHKLKTKLVKKKGTRAYACQCSWRTIEDLTDLQTDHQLHWVCGKH
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237616..5237769,5242421..5242516,5247350..5247391,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5260933))
location: region:5237616-5260933:-1
so has part: feature:5260782-5260933:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5247350-5247391:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5237616-5237769:-1:exon

XP_031295213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5260933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5247350-5247391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5237616-5237769:-1:exon

C25H8orf37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf37
product: chromosome 25 C8orf37 homolog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031439352.1
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237628..5238008,5238111..5238130,5242421..5242516,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5261045))
location: region:5237628-5261045:-1
so has part: feature:5260782-5261045:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5238111-5238130:-1:exon
so has part: feature:5237628-5238008:-1:exon

position:5237628:-1
position: 5237628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5261045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5238111-5238130:-1:exon

position:5238111:-1
position: 5238111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5238130:-1
position: 5238130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5237628-5238008:-1:exon

position:5238008:-1
position: 5238008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C25H8orf37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf37
product: chromosome 25 C8orf37 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031439351.1
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237628..5238008,5238111..5238130,5242421..5242534,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5261045))
location: region:5237628-5261045:-1
so has part: feature:5260782-5261045:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242534:-1:exon
so has part: feature:5238111-5238130:-1:exon
so has part: feature:5237628-5238008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5261045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5238111-5238130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5237628-5238008:-1:exon

C25H8orf37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf37
product: chromosome 25 C8orf37 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031439350.1
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237628..5238008,5238111..5238130,5242421..5242516,5247350..5247391,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5261045))
location: region:5237628-5261045:-1
so has part: feature:5260782-5261045:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5247350-5247391:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5238111-5238130:-1:exon
so has part: feature:5237628-5238008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5261045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5247350-5247391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5238111-5238130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5237628-5238008:-1:exon

C25H8orf37
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C25H8orf37
product: chromosome 25 C8orf37 homolog, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031439355.1
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237629..5237769,5238046..5238130,5242421..5242516,5247350..5247391,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5261045))
location: region:5237629-5261045:-1
so has part: feature:5260782-5261045:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5247350-5247391:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5238046-5238130:-1:exon
so has part: feature:5237629-5237769:-1:exon

position:5237629:-1
position: 5237629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5261045:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5247350-5247391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5238046-5238130:-1:exon

position:5238046:-1
position: 5238046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5237629-5237769:-1:exon

C25H8orf37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C8orf37 homolog isoform X3
translation: MAEDLDELLDEVESKFCSPDPLRLDMVERPRGGGGVLSNDRNRAEAKENLRSTEAFKKEDDLDSLINEIFEEPNFDKKHFKLKSKSSGNTSVRASIRGLGKSCSPVYLGGSAVPCGIGTNTSQRACDRLRCVACDFWVVSYDDHRWDRSCDYLFFRLLKHGPAALINRPRGPPFKILNTKEVPSEREHRSIFSIFCVRAPGSLVFRCCKDRKIKQLELRFCFFKSLSTEQRHYAETFLFY
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237773..5238008,5238111..5238130,5242421..5242516,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5260933))
location: region:5237773-5260933:-1
so has part: feature:5260782-5260933:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5238111-5238130:-1:exon
so has part: feature:5237773-5238008:-1:exon

XP_031295212.1
type: Protein
SIO_000068: ncbiprotein

position:5237773:-1
position: 5237773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5260933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5238111-5238130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5237773-5238008:-1:exon

C25H8orf37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C8orf37 homolog isoform X2
translation: MAEDLDELLDEVESKFCSPDPLRLDMVERPRGGGGVLSNDRNRAEAKENLRSTEAFKKEDDLDSLINEIFEEPNFDKKHFKLKSKSSGNTSVRASIRGLGKSCSPVYLGGSAVPCGIGTNTSQRAFSLTRACDRLRCVACDFWVVSYDDHRWDRSCDYLFFRLLKHGPAALINRPRGPPFKILNTKEVPSEREHRSIFSIFCVRAPGSLVFRCCKDRKIKQLELRFCFFKSLSTEQRHYAETFLFY
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237773..5238008,5238111..5238130,5242421..5242534,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5260933))
location: region:5237773-5260933:-1
so has part: feature:5260782-5260933:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5242421-5242534:-1:exon
so has part: feature:5238111-5238130:-1:exon
so has part: feature:5237773-5238008:-1:exon

XP_031295211.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5260933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5242421-5242534:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5238111-5238130:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5237773-5238008:-1:exon

C25H8orf37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C8orf37 homolog isoform X1
translation: MAEDLDELLDEVESKFCSPDPLRLDMVERPRGGGGVLSNDRNRAEAKENLRSTEAFKKEDDLDSLINEIFEEPNFDKKHFKLKSKSSGNTSVRASIRGLGKSCSPVYLGGSAVPCGIGTNTSQRDKKGKHMEFAYMHRACDRLRCVACDFWVVSYDDHRWDRSCDYLFFRLLKHGPAALINRPRGPPFKILNTKEVPSEREHRSIFSIFCVRAPGSLVFRCCKDRKIKQLELRFCFFKSLSTEQRHYAETFLFY
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5237773..5238008,5238111..5238130,5242421..5242516,5247350..5247391,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5260933))
location: region:5237773-5260933:-1
so has part: feature:5260782-5260933:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5247350-5247391:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5238111-5238130:-1:exon
so has part: feature:5237773-5238008:-1:exon

XP_031295210.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5260933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5247350-5247391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5238111-5238130:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5237773-5238008:-1:exon

C25H8orf37
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C25H8orf37
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein C8orf37 homolog isoform X7
translation: MAEDLDELLDEVESKFCSPDPLRLDMVERPRGGGGVLSNDRNRAEAKENLRSTEAFKKEDDLDSLINEIFEEPNFDKKHFKLKSKSSGNTSVRASIRGLGKSCSPVYLGGSAVPCGIGTNTSQRDKKGKHMEFAYMHRACDRLRCVACDFWVVSYDDHRWDRSCDYLFFRLLKHGPGEYMR
SIO_010081: C25H8orf37
subclass of: SO_0000673
so part of: C25H8orf37
location: complement(join(5238094..5238130,5242421..5242516,5247350..5247391,5249670..5249735,5250232..5250296,5255999..5256086,5260782..5260933))
location: region:5238094-5260933:-1
so has part: feature:5260782-5260933:-1:exon
so has part: feature:5255999-5256086:-1:exon
so has part: feature:5250232-5250296:-1:exon
so has part: feature:5249670-5249735:-1:exon
so has part: feature:5247350-5247391:-1:exon
so has part: feature:5242421-5242516:-1:exon
so has part: feature:5238094-5238130:-1:exon

XP_031295215.1
type: Protein
SIO_000068: ncbiprotein

position:5238094:-1
position: 5238094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5260782-5260933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5255999-5256086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5250232-5250296:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5249670-5249735:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5247350-5247391:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5242421-5242516:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5238094-5238130:-1:exon

TRNAS-AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAS-AGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5261400..5261481)
location: region:5261400-5261481:-1
so has part: feature:5261400-5261481:-1:exon
subclass of: SO_0000663

116149069
type: Gene
SIO_000068: ncbigene

position:5261400:-1
position: 5261400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5261481:-1
position: 5261481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5261400-5261481:-1:exon

TRNAS-AGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAS-AGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5261446..5261448),aa:Ser, seq:aga)
SIO_010081: TRNAS-AGA
subclass of: SO_0000673
so part of: TRNAS-AGA
location: complement(5261400..5261481)
location: region:5261400-5261481:-1
so has part: feature:5261400-5261481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5261400-5261481:-1:exon

LOC116149021
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149021
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5325254..5339246
location: region:5325254-5339246:1
so has part: feature:5325254-5339246:1:exon
subclass of: SO_0000011

116149021
type: Gene
SIO_000068: ncbigene

position:5325254:1
position: 5325254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5339246:1
position: 5339246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5325254-5339246:1:exon

LOC116149021
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116149021
product: uncharacterized LOC116149021
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132661.1
SIO_010081: LOC116149021
subclass of: SO_0000673
so part of: LOC116149021
location: join(5325254..5325337,5334791..5335019,5338579..5339246)
location: region:5325254-5339246:1
so has part: feature:5325254-5325337:1:exon
so has part: feature:5334791-5335019:1:exon
so has part: feature:5338579-5339246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5325254-5325337:1:exon

position:5325337:1
position: 5325337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5334791-5335019:1:exon

position:5334791:1
position: 5334791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5335019:1
position: 5335019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5338579-5339246:1:exon

position:5338579:1
position: 5338579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5402528..5402599
location: region:5402528-5402599:1
so has part: feature:5402528-5402599:1:exon
subclass of: SO_0000663

116149081
type: Gene
SIO_000068: ncbigene

position:5402528:1
position: 5402528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5402599:1
position: 5402599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5402528-5402599:1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5402560..5402562,aa:Thr,seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: 5402528..5402599
location: region:5402528-5402599:1
so has part: feature:5402528-5402599:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5402528-5402599:1:exon

LOC116149048
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149048
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(5405246..5405378)
location: region:5405246-5405378:-1
so has part: feature:5405246-5405378:-1:exon
subclass of: SO_0000578

116149048
type: Gene
SIO_000068: ncbigene

position:5405246:-1
position: 5405246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5405378:-1
position: 5405378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5405246-5405378:-1:exon

LOC116149048
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116149048
product: small nucleolar RNA SNORA70
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132685.1
SIO_010081: LOC116149048
subclass of: SO_0000673
so part of: LOC116149048
location: complement(5405246..5405378)
location: region:5405246-5405378:-1
so has part: feature:5405246-5405378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5405246-5405378:-1:exon

TRNAA-GGC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAA-GGC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 5504395..5504466
location: region:5504395-5504466:1
so has part: feature:5504395-5504466:1:exon
subclass of: SO_0000663

116149082
type: Gene
SIO_000068: ncbigene

position:5504395:1
position: 5504395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5504466:1
position: 5504466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5504395-5504466:1:exon

TRNAA-GGC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAA-GGC
product: tRNA-Ala
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA alanine (anticodon GGC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:5504427..5504429,aa:Ala,seq:ggc)
SIO_010081: TRNAA-GGC
subclass of: SO_0000673
so part of: TRNAA-GGC
location: 5504395..5504466
location: region:5504395-5504466:1
so has part: feature:5504395-5504466:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5504395-5504466:1:exon

LOC116149033
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116149033
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 5639314..5639432
location: region:5639314-5639432:1
so has part: feature:5639314-5639432:1:exon
subclass of: SO_0000573

116149033
type: Gene
SIO_000068: ncbigene

position:5639314:1
position: 5639314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5639432:1
position: 5639432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5639314-5639432:1:exon

LOC116149033
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9838
gene: LOC116149033
product: 5S ribosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00001
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132671.1
SIO_010081: LOC116149033
subclass of: SO_0000673
so part of: LOC116149033
location: 5639314..5639432
location: region:5639314-5639432:1
so has part: feature:5639314-5639432:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5639314-5639432:1:exon

LOC105085757
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105085757
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5689811..5690094
location: region:5689811-5690094:1
so has part: feature:5689811-5690094:1:exon

105085757
type: Gene
SIO_000068: ncbigene

position:5689811:1
position: 5689811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5690094:1
position: 5690094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5689811-5690094:1:exon

LOC105085757
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085757
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085757
subclass of: SO_0000673
so part of: LOC105085757
location: 5689811..5690094
location: region:5689811-5690094:1
so has part: feature:5689811-5690094:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5689811-5690094:1:exon

GDF6
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GDF6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5967620..5986880)
location: region:5967620-5986880:-1
so has part: feature:5967620-5986880:-1:exon
subclass of: SO_0000010

105090576
type: Gene
SIO_000068: ncbigene

position:5967620:-1
position: 5967620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5986880:-1
position: 5986880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5967620-5986880:-1:exon

GDF6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GDF6
product: growth differentiation factor 6
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_031439356.1
SIO_010081: GDF6
subclass of: SO_0000673
so part of: GDF6
location: complement(join(5967620..5970747,5985348..5986880))
location: region:5967620-5986880:-1
so has part: feature:5985348-5986880:-1:exon
so has part: feature:5967620-5970747:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5985348-5986880:-1:exon

position:5985348:-1
position: 5985348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5967620-5970747:-1:exon

position:5970747:-1
position: 5970747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GDF6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GDF6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 3 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: growth/differentiation factor 6
translation: MEEKRTGQSQRQKRLGTARREAGACRRAQQLLASIQTLKTRGLCLTSRVGNRRPGFVESGTPPREWGCSGLGPTPGARRGFSGLGLALEGTDQLAWSLGPRKESTTARSRRSFGSRSACSELSLGGAAAPSLFRGRKLPGNWRWQPRTESRRSAAEGLSFYRCQRDSGVADAPASPPPGALAGRPLPSAPGRLRAHRPATPRASRGGAASPATPAHSGPSPPHLLPAPPGLSSHPLLLSPPLPFFSSPPGEGREGAWQGRGCVLVTRLLALRVRPRSRAPAAVQPLCAPRALLLSLSGRRCHSLVMDTPRVLLSAVFLISFLWDLPGFQQASIASSSSSAELVSAKGMRSRKEGKMPRAPRANATARAPLESQEPQPRPQEEPRRRPPQQPEAQEPPGRGPRVVPHEYMLSIYRTYSIAEKLGINASFFQSSKSANTITSFVDRGLDDLSHTPLRRQKYLFDVSTLSDKEELVGAELRLFRQAPAAPWGPPARPLHVQLFPCLSPLLLDARTLDPQGAPRAGWEVFDVWQGLRHQPWKQLCLELRAAWGEPGAGEAEARAPEPQQPPPPDLRSLGFGRRVRTPQERALLVVFTRSQRKNLFAEMREQLGLAEVAGPGAGAGAEGSWPPXSGTPDAGPWLPSPXRRRRRTAFASRHGKRHGKKSRLRCSKKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCDFPLRSHLEPTNHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAGNNVVYKQYEDMVVESCGCR
SIO_010081: GDF6
subclass of: SO_0000673
so part of: GDF6
location: complement(join(5969783..5970747,5985348..5986686))
location: region:5969783-5986686:-1
so has part: feature:5985348-5986686:-1:exon
so has part: feature:5969783-5970747:-1:exon

XP_031295216.1
type: Protein
SIO_000068: ncbiprotein

position:5969783:-1
position: 5969783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5986686:-1
position: 5986686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5985348-5986686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5969783-5970747:-1:exon

LOC105090575
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105090575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6038488..6044711)
location: region:6038488-6044711:-1
so has part: feature:6038488-6044711:-1:exon
subclass of: SO_0000010

105090575
type: Gene
SIO_000068: ncbigene

position:6038488:-1
position: 6038488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6044711:-1
position: 6044711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6038488-6044711:-1:exon

LOC105090575
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105090575
product: cytochrome b-c1 complex subunit 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_031439357.1
SIO_010081: LOC105090575
subclass of: SO_0000673
so part of: LOC105090575
location: complement(join(6038488..6040505,6041183..6041349,6041877..6041948,6044587..6044711))
location: region:6038488-6044711:-1
so has part: feature:6044587-6044711:-1:exon
so has part: feature:6041877-6041948:-1:exon
so has part: feature:6041183-6041349:-1:exon
so has part: feature:6038488-6040505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6044587-6044711:-1:exon

position:6044587:-1
position: 6044587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6041877-6041948:-1:exon

position:6041877:-1
position: 6041877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041948:-1
position: 6041948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6041183-6041349:-1:exon

position:6041183:-1
position: 6041183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6041349:-1
position: 6041349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6038488-6040505:-1:exon

position:6040505:-1
position: 6040505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105090575
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105090575
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome b-c1 complex subunit 7
translation: MAGRPAVAASSRWLDGIRKWYYSAAGFNKLGLMRDDTIYENDDVKEAIRRLPEHLYNERVFRIKRALDLSMRQQILPKEQWTKYEEDKFYLEPYLKEVIRERKEKEEWAKK
SIO_010081: LOC105090575
subclass of: SO_0000673
so part of: LOC105090575
location: complement(join(6040428..6040505,6041183..6041349,6041877..6041948,6044587..6044605))
location: region:6040428-6044605:-1
so has part: feature:6044587-6044605:-1:exon
so has part: feature:6041877-6041948:-1:exon
so has part: feature:6041183-6041349:-1:exon
so has part: feature:6040428-6040505:-1:exon

XP_031295217.1
type: Protein
SIO_000068: ncbiprotein

position:6040428:-1
position: 6040428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6044605:-1
position: 6044605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6044587-6044605:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6041877-6041948:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6041183-6041349:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6040428-6040505:-1:exon

MTERF3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MTERF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6047401..6066702)
location: region:6047401-6066702:-1
so has part: feature:6047401-6066702:-1:exon
subclass of: SO_0000010

105090560
type: Gene
SIO_000068: ncbigene

position:6047401:-1
position: 6047401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6066702:-1
position: 6066702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6047401-6066702:-1:exon

MTERF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MTERF3
product: mitochondrial transcription termination factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031439358.1
SIO_010081: MTERF3
subclass of: SO_0000673
so part of: MTERF3
location: complement(join(6047401..6047687,6050897..6051058,6052836..6052907,6053283..6053430,6057154..6057343,6062063..6062215,6063495..6063843,6066332..6066702))
location: region:6047401-6066702:-1
so has part: feature:6066332-6066702:-1:exon
so has part: feature:6063495-6063843:-1:exon
so has part: feature:6062063-6062215:-1:exon
so has part: feature:6057154-6057343:-1:exon
so has part: feature:6053283-6053430:-1:exon
so has part: feature:6052836-6052907:-1:exon
so has part: feature:6050897-6051058:-1:exon
so has part: feature:6047401-6047687:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6066332-6066702:-1:exon

position:6066332:-1
position: 6066332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6063495-6063843:-1:exon

position:6063495:-1
position: 6063495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6063843:-1
position: 6063843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6062063-6062215:-1:exon

position:6062063:-1
position: 6062063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6062215:-1
position: 6062215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6057154-6057343:-1:exon

position:6057154:-1
position: 6057154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6057343:-1
position: 6057343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6053283-6053430:-1:exon

position:6053283:-1
position: 6053283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6053430:-1
position: 6053430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6052836-6052907:-1:exon

position:6052836:-1
position: 6052836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6052907:-1
position: 6052907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6050897-6051058:-1:exon

position:6050897:-1
position: 6050897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6051058:-1
position: 6051058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6047401-6047687:-1:exon

position:6047687:-1
position: 6047687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTERF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MTERF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription termination factor 3, mitochondrial
translation: MALSAQQIPRWFSSVKLSSFITATRLRKRFQRPGKTLSHRFFTQPQLSSDNCFLRCGFKTYRTSSLWNRSQTTSSNSQEISSVQSTLLPAVNARSQKTQKIPSFDSEPSEEGLDDLPPLSPLQPVSEEEAVQIIADPPLPPSSFTLRDYVDHSETLQKLVLLGVDLSKIEKHPDAANLLLRLDFEKDIKQILLFLKDLGIEDNQLGTFFTKNYAIFSEDLENLKTRVAYLQSKNFSKADIAQMVRNAPFLLSFSVERLDNRLGFFQKELELSVKKTRDLVIRLPRLLTGSLEPVKENMKVYRLELGFKHNEIQHMITKIPKMLTANKRKLTETFDYVHNVMRVPHHIIVKFPQVFNTRLFKVKERHLFLTYLGRAQYDPAKPNYISLDKLVSMPDEIFCEEMAKASVQDFEKFLKTL
SIO_010081: MTERF3
subclass of: SO_0000673
so part of: MTERF3
location: complement(join(6047493..6047687,6050897..6051058,6052836..6052907,6053283..6053430,6057154..6057343,6062063..6062215,6063495..6063828))
location: region:6047493-6063828:-1
so has part: feature:6063495-6063828:-1:exon
so has part: feature:6062063-6062215:-1:exon
so has part: feature:6057154-6057343:-1:exon
so has part: feature:6053283-6053430:-1:exon
so has part: feature:6052836-6052907:-1:exon
so has part: feature:6050897-6051058:-1:exon
so has part: feature:6047493-6047687:-1:exon

XP_031295218.1
type: Protein
SIO_000068: ncbiprotein

position:6047493:-1
position: 6047493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6063828:-1
position: 6063828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6063495-6063828:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6062063-6062215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6057154-6057343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6053283-6053430:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6052836-6052907:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6050897-6051058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6047493-6047687:-1:exon

PTDSS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PTDSS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6066944..6126740
location: region:6066944-6126740:1
so has part: feature:6066944-6126740:1:exon
subclass of: SO_0000010

105090559
type: Gene
SIO_000068: ncbigene

position:6066944:1
position: 6066944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6126740:1
position: 6126740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6066944-6126740:1:exon

PTDSS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTDSS1
product: phosphatidylserine synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_010981916.2
SIO_010081: PTDSS1
subclass of: SO_0000673
so part of: PTDSS1
location: join(6066944..6067165,6078638..6078729,6091285..6091329,6094035..6094159,6100173..6100331,6103755..6103906,6106958..6107099,6109007..6109119,6112167..6112232,6117431..6117530,6123027..6123095,6123764..6123833,6125670..6126740)
location: region:6066944-6126740:1
so has part: feature:6066944-6067165:1:exon
so has part: feature:6078638-6078729:1:exon
so has part: feature:6091285-6091329:1:exon
so has part: feature:6094035-6094159:1:exon
so has part: feature:6100173-6100331:1:exon
so has part: feature:6103755-6103906:1:exon
so has part: feature:6106958-6107099:1:exon
so has part: feature:6109007-6109119:1:exon
so has part: feature:6112167-6112232:1:exon
so has part: feature:6117431-6117530:1:exon
so has part: feature:6123027-6123095:1:exon
so has part: feature:6123764-6123833:1:exon
so has part: feature:6125670-6126740:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6066944-6067165:1:exon

position:6067165:1
position: 6067165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6078638-6078729:1:exon

position:6078638:1
position: 6078638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6078729:1
position: 6078729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6091285-6091329:1:exon

position:6091285:1
position: 6091285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6091329:1
position: 6091329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6094035-6094159:1:exon

position:6094035:1
position: 6094035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6094159:1
position: 6094159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6100173-6100331:1:exon

position:6100173:1
position: 6100173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6100331:1
position: 6100331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6103755-6103906:1:exon

position:6103755:1
position: 6103755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6103906:1
position: 6103906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6106958-6107099:1:exon

position:6106958:1
position: 6106958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6107099:1
position: 6107099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6109007-6109119:1:exon

position:6109007:1
position: 6109007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6109119:1
position: 6109119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6112167-6112232:1:exon

position:6112167:1
position: 6112167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6112232:1
position: 6112232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6117431-6117530:1:exon

position:6117431:1
position: 6117431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6117530:1
position: 6117530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6123027-6123095:1:exon

position:6123027:1
position: 6123027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123095:1
position: 6123095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6123764-6123833:1:exon

position:6123764:1
position: 6123764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6123833:1
position: 6123833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6125670-6126740:1:exon

position:6125670:1
position: 6125670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTDSS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTDSS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine synthase 1 isoform X1
translation: MASCVGSRTLSKDDVNYKMHFRMINEQQVEDITIDFFYRPHTITLLSFTIVSLMYFAFTRDDSVPEDNIWRGILSVIFFFLIISVLAFPNGPFTRPHPALWRMVFGLSVLYFLFLVFLLFLNFEQVKSIMYWLDPNLRYATREADIMEYAVNCHVITWERIISHFDIFAFGHFWGWAMKALLIRSYGLCWTISITWELTELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGMVVCRFLEMRTYHWASFKDIHTTTGKIKRAVLQFTPASWTYVRWFDPKSSFQRVAGVYLFMIIWQLTELNTFFLKHIFVFQASHPLSWCRILFIGCITAPTVRQYYAYLTDTQCKRVGTQCWVFGVIGFLEAIVCIKFGQDLFSKTQILYVVLWLLCVAFTTFLCLYGMVWYAEHYGHREKTYSECEDSTYSPDISWPHGKGTKGSEDGPPKHPGNNESHSSRRRNRHSKSKVTNGVGKK
SIO_010081: PTDSS1
subclass of: SO_0000673
so part of: PTDSS1
location: join(6066987..6067165,6078638..6078729,6091285..6091329,6094035..6094159,6100173..6100331,6103755..6103906,6106958..6107099,6109007..6109119,6112167..6112232,6117431..6117530,6123027..6123095,6123764..6123833,6125670..6125779)
location: region:6066987-6125779:1
so has part: feature:6066987-6067165:1:exon
so has part: feature:6078638-6078729:1:exon
so has part: feature:6091285-6091329:1:exon
so has part: feature:6094035-6094159:1:exon
so has part: feature:6100173-6100331:1:exon
so has part: feature:6103755-6103906:1:exon
so has part: feature:6106958-6107099:1:exon
so has part: feature:6109007-6109119:1:exon
so has part: feature:6112167-6112232:1:exon
so has part: feature:6117431-6117530:1:exon
so has part: feature:6123027-6123095:1:exon
so has part: feature:6123764-6123833:1:exon
so has part: feature:6125670-6125779:1:exon

XP_010980218.1
type: Protein
SIO_000068: ncbiprotein

position:6066987:1
position: 6066987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6125779:1
position: 6125779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6066987-6067165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6078638-6078729:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6091285-6091329:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6094035-6094159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6100173-6100331:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6103755-6103906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6106958-6107099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6109007-6109119:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6112167-6112232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6117431-6117530:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6123027-6123095:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6123764-6123833:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6125670-6125779:1:exon

PTDSS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTDSS1
product: phosphatidylserine synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031439359.1
SIO_010081: PTDSS1
subclass of: SO_0000673
so part of: PTDSS1
location: join(6067027..6067165,6077561..6077670,6078638..6078729,6091285..6091329,6094035..6094159,6100173..6100331,6103755..6103906,6106958..6107099,6109007..6109119,6112167..6112232,6117431..6117530,6123027..6123095,6123764..6123833,6125670..6126740)
location: region:6067027-6126740:1
so has part: feature:6067027-6067165:1:exon
so has part: feature:6077561-6077670:1:exon
so has part: feature:6078638-6078729:1:exon
so has part: feature:6091285-6091329:1:exon
so has part: feature:6094035-6094159:1:exon
so has part: feature:6100173-6100331:1:exon
so has part: feature:6103755-6103906:1:exon
so has part: feature:6106958-6107099:1:exon
so has part: feature:6109007-6109119:1:exon
so has part: feature:6112167-6112232:1:exon
so has part: feature:6117431-6117530:1:exon
so has part: feature:6123027-6123095:1:exon
so has part: feature:6123764-6123833:1:exon
so has part: feature:6125670-6126740:1:exon

position:6067027:1
position: 6067027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6067027-6067165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6077561-6077670:1:exon

position:6077561:1
position: 6077561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6077670:1
position: 6077670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6078638-6078729:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6091285-6091329:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6094035-6094159:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6100173-6100331:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6103755-6103906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6106958-6107099:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6109007-6109119:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6112167-6112232:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6117431-6117530:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6123027-6123095:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6123764-6123833:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6125670-6126740:1:exon

PTDSS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PTDSS1
product: phosphatidylserine synthase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_031439360.1
SIO_010081: PTDSS1
subclass of: SO_0000673
so part of: PTDSS1
location: join(6067034..6067165,6091285..6091329,6094035..6094159,6100173..6100331,6103755..6103906,6106958..6107099,6109007..6109119,6112167..6112232,6117431..6117530,6123027..6123095,6123764..6123833,6125670..6126740)
location: region:6067034-6126740:1
so has part: feature:6067034-6067165:1:exon
so has part: feature:6091285-6091329:1:exon
so has part: feature:6094035-6094159:1:exon
so has part: feature:6100173-6100331:1:exon
so has part: feature:6103755-6103906:1:exon
so has part: feature:6106958-6107099:1:exon
so has part: feature:6109007-6109119:1:exon
so has part: feature:6112167-6112232:1:exon
so has part: feature:6117431-6117530:1:exon
so has part: feature:6123027-6123095:1:exon
so has part: feature:6123764-6123833:1:exon
so has part: feature:6125670-6126740:1:exon

position:6067034:1
position: 6067034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6067034-6067165:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6091285-6091329:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6094035-6094159:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6100173-6100331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6103755-6103906:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6106958-6107099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6109007-6109119:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6112167-6112232:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6117431-6117530:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6123027-6123095:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6123764-6123833:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6125670-6126740:1:exon

PTDSS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTDSS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine synthase 1 isoform X2
translation: MVFGLSVLYFLFLVFLLFLNFEQVKSIMYWLDPNLRYATREADIMEYAVNCHVITWERIISHFDIFAFGHFWGWAMKALLIRSYGLCWTISITWELTELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGMVVCRFLEMRTYHWASFKDIHTTTGKIKRAVLQFTPASWTYVRWFDPKSSFQRVAGVYLFMIIWQLTELNTFFLKHIFVFQASHPLSWCRILFIGCITAPTVRQYYAYLTDTQCKRVGTQCWVFGVIGFLEAIVCIKFGQDLFSKTQILYVVLWLLCVAFTTFLCLYGMVWYAEHYGHREKTYSECEDSTYSPDISWPHGKGTKGSEDGPPKHPGNNESHSSRRRNRHSKSKVTNGVGKK
SIO_010081: PTDSS1
subclass of: SO_0000673
so part of: PTDSS1
location: join(6091320..6091329,6094035..6094159,6100173..6100331,6103755..6103906,6106958..6107099,6109007..6109119,6112167..6112232,6117431..6117530,6123027..6123095,6123764..6123833,6125670..6125779)
location: region:6091320-6125779:1
so has part: feature:6091320-6091329:1:exon
so has part: feature:6094035-6094159:1:exon
so has part: feature:6100173-6100331:1:exon
so has part: feature:6103755-6103906:1:exon
so has part: feature:6106958-6107099:1:exon
so has part: feature:6109007-6109119:1:exon
so has part: feature:6112167-6112232:1:exon
so has part: feature:6117431-6117530:1:exon
so has part: feature:6123027-6123095:1:exon
so has part: feature:6123764-6123833:1:exon
so has part: feature:6125670-6125779:1:exon

XP_031295219.1
type: Protein
SIO_000068: ncbiprotein

position:6091320:1
position: 6091320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6091320-6091329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6094035-6094159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6100173-6100331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6103755-6103906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6106958-6107099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6109007-6109119:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6112167-6112232:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6117431-6117530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6123027-6123095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6123764-6123833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6125670-6125779:1:exon

PTDSS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PTDSS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylserine synthase 1 isoform X2
translation: MVFGLSVLYFLFLVFLLFLNFEQVKSIMYWLDPNLRYATREADIMEYAVNCHVITWERIISHFDIFAFGHFWGWAMKALLIRSYGLCWTISITWELTELFFMHLLPNFAECWWDQVILDILLCNGGGIWLGMVVCRFLEMRTYHWASFKDIHTTTGKIKRAVLQFTPASWTYVRWFDPKSSFQRVAGVYLFMIIWQLTELNTFFLKHIFVFQASHPLSWCRILFIGCITAPTVRQYYAYLTDTQCKRVGTQCWVFGVIGFLEAIVCIKFGQDLFSKTQILYVVLWLLCVAFTTFLCLYGMVWYAEHYGHREKTYSECEDSTYSPDISWPHGKGTKGSEDGPPKHPGNNESHSSRRRNRHSKSKVTNGVGKK
SIO_010081: PTDSS1
subclass of: SO_0000673
so part of: PTDSS1
location: join(6091320..6091329,6094035..6094159,6100173..6100331,6103755..6103906,6106958..6107099,6109007..6109119,6112167..6112232,6117431..6117530,6123027..6123095,6123764..6123833,6125670..6125779)
location: region:6091320-6125779:1
so has part: feature:6091320-6091329:1:exon
so has part: feature:6094035-6094159:1:exon
so has part: feature:6100173-6100331:1:exon
so has part: feature:6103755-6103906:1:exon
so has part: feature:6106958-6107099:1:exon
so has part: feature:6109007-6109119:1:exon
so has part: feature:6112167-6112232:1:exon
so has part: feature:6117431-6117530:1:exon
so has part: feature:6123027-6123095:1:exon
so has part: feature:6123764-6123833:1:exon
so has part: feature:6125670-6125779:1:exon

XP_031295220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6091320-6091329:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6094035-6094159:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6100173-6100331:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6103755-6103906:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6106958-6107099:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6109007-6109119:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6112167-6112232:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6117431-6117530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6123027-6123095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6123764-6123833:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6125670-6125779:1:exon

SDC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6251973..6355797
location: region:6251973-6355797:1
so has part: feature:6251973-6355797:1:exon
subclass of: SO_0000010

105090558
type: Gene
SIO_000068: ncbigene

position:6251973:1
position: 6251973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6355797:1
position: 6355797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6251973-6355797:1:exon

SDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SDC2
product: syndecan 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010981915.2
SIO_010081: SDC2
subclass of: SO_0000673
so part of: SDC2
location: join(6251973..6252546,6340670..6340781,6348362..6348498,6352317..6352452,6353395..6355797)
location: region:6251973-6355797:1
so has part: feature:6251973-6252546:1:exon
so has part: feature:6340670-6340781:1:exon
so has part: feature:6348362-6348498:1:exon
so has part: feature:6352317-6352452:1:exon
so has part: feature:6353395-6355797:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6251973-6252546:1:exon

position:6252546:1
position: 6252546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6340670-6340781:1:exon

position:6340670:1
position: 6340670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6340781:1
position: 6340781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6348362-6348498:1:exon

position:6348362:1
position: 6348362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6348498:1
position: 6348498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6352317-6352452:1:exon

position:6352317:1
position: 6352317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6352452:1
position: 6352452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6353395-6355797:1:exon

position:6353395:1
position: 6353395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syndecan-2 isoform X1
translation: MRRAWILLTLGLVACVSAESRAELTSDKDMYLDNSSIEEASGVYPIDDDDYASASGSGADEDGESPELTTLRPLPKIPFTSAAPRVETTTLNKLQNKIPAQTKSPEEIDKEKVHLSDSERKMEPAEEDTNVYTEKHSDNLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
SIO_010081: SDC2
subclass of: SO_0000673
so part of: SDC2
location: join(6252487..6252546,6340670..6340781,6348362..6348498,6352317..6352452,6353395..6353558)
location: region:6252487-6353558:1
so has part: feature:6252487-6252546:1:exon
so has part: feature:6340670-6340781:1:exon
so has part: feature:6348362-6348498:1:exon
so has part: feature:6352317-6352452:1:exon
so has part: feature:6353395-6353558:1:exon

XP_010980217.1
type: Protein
SIO_000068: ncbiprotein

position:6252487:1
position: 6252487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6353558:1
position: 6353558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6252487-6252546:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6340670-6340781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6348362-6348498:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6352317-6352452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6353395-6353558:1:exon

SDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SDC2
product: syndecan 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031439362.1
SIO_010081: SDC2
subclass of: SO_0000673
so part of: SDC2
location: join(6337798..6337830,6340670..6340781,6348362..6348498,6352317..6352452,6353395..6355797)
location: region:6337798-6355797:1
so has part: feature:6337798-6337830:1:exon
so has part: feature:6340670-6340781:1:exon
so has part: feature:6348362-6348498:1:exon
so has part: feature:6352317-6352452:1:exon
so has part: feature:6353395-6355797:1:exon

position:6337798:1
position: 6337798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6337798-6337830:1:exon

position:6337830:1
position: 6337830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6340670-6340781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6348362-6348498:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6352317-6352452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6353395-6355797:1:exon

SDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syndecan-2 isoform X2
translation: MRLNYERAELTSDKDMYLDNSSIEEASGVYPIDDDDYASASGSGADEDGESPELTTLRPLPKIPFTSAAPRVETTTLNKLQNKIPAQTKSPEEIDKEKVHLSDSERKMEPAEEDTNVYTEKHSDNLFKRTEVLAAVIAGGVIGFLFAIFLILLLVYRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
SIO_010081: SDC2
subclass of: SO_0000673
so part of: SDC2
location: join(6337813..6337830,6340670..6340781,6348362..6348498,6352317..6352452,6353395..6353558)
location: region:6337813-6353558:1
so has part: feature:6337813-6337830:1:exon
so has part: feature:6340670-6340781:1:exon
so has part: feature:6348362-6348498:1:exon
so has part: feature:6352317-6352452:1:exon
so has part: feature:6353395-6353558:1:exon

XP_031295222.1
type: Protein
SIO_000068: ncbiprotein

position:6337813:1
position: 6337813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6337813-6337830:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6340670-6340781:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6348362-6348498:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6352317-6352452:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6353395-6353558:1:exon

CPQ
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CPQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6372154..6771786
location: region:6372154-6771786:1
so has part: feature:6372154-6771786:1:exon
subclass of: SO_0000010

105090557
type: Gene
SIO_000068: ncbigene

position:6372154:1
position: 6372154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6771786:1
position: 6771786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6372154-6771786:1:exon

CPQ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CPQ
product: carboxypeptidase Q, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_031439366.1
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6372154..6372391,6475523..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6771272..6771786)
location: region:6372154-6771786:1
so has part: feature:6372154-6372391:1:exon
so has part: feature:6475523-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6771272-6771786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6372154-6372391:1:exon

position:6372391:1
position: 6372391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6475523-6475976:1:exon

position:6475523:1
position: 6475523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6475976:1
position: 6475976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6508399-6508606:1:exon

position:6508399:1
position: 6508399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6508606:1
position: 6508606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6559418-6559625:1:exon

position:6559418:1
position: 6559418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6559625:1
position: 6559625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6639426-6639537:1:exon

position:6639426:1
position: 6639426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6639537:1
position: 6639537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6684233-6684324:1:exon

position:6684233:1
position: 6684233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6684324:1
position: 6684324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6711705-6711906:1:exon

position:6711705:1
position: 6711705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6711906:1
position: 6711906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6771272-6771786:1:exon

position:6771272:1
position: 6771272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPQ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CPQ
product: carboxypeptidase Q, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031439365.1
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6372482..6372698,6475523..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6771272..6771786)
location: region:6372482-6771786:1
so has part: feature:6372482-6372698:1:exon
so has part: feature:6475523-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6771272-6771786:1:exon

position:6372482:1
position: 6372482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6372482-6372698:1:exon

position:6372698:1
position: 6372698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6475523-6475976:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6771272-6771786:1:exon

CPQ
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: CPQ
product: carboxypeptidase Q, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004132471.1
SIO_010081: CPQ
so part of: CPQ
location: join(6475523..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6768415..6768536,6771272..6771395)
location: region:6475523-6771395:1
so has part: feature:6475523-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6768415-6768536:1:exon
so has part: feature:6771272-6771395:1:exon

position:6771395:1
position: 6771395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6475523-6475976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6768415-6768536:1:exon

position:6768415:1
position: 6768415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6768536:1
position: 6768536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6771272-6771395:1:exon

CPQ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CPQ
product: carboxypeptidase Q, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_031439364.1
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6475523..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6720173..6720278)
location: region:6475523-6720278:1
so has part: feature:6475523-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6720173-6720278:1:exon

position:6720278:1
position: 6720278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6475523-6475976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6720173-6720278:1:exon

position:6720173:1
position: 6720173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPQ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CPQ
product: carboxypeptidase Q, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_031439363.1
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6475523..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6717652..6717824)
location: region:6475523-6717824:1
so has part: feature:6475523-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6717652-6717824:1:exon

position:6717824:1
position: 6717824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6475523-6475976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6717652-6717824:1:exon

position:6717652:1
position: 6717652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CPQ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CPQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase Q isoform X3
translation: MKFLLFIFVGVVHLLSLNSGKAIYKNDICQRTFQEIKEEIACYGDVAKAIINLAVYGKAQNRSYERLALLVDTVGPRPSGSKSLEKAIQIMHQNLQEDGLENVHLEPVKIPHWERGEESAVMLEPRIHKMAILGLGSSIGTPPEGITAEVLVVTSFNELQRRAPEARGKIVVYNQPYTNYSRTVQYRVQGAVEAAKVGALASLIRSVASFSIYSPHTGIQEYQDGVPKIPTACITVEDAEMMSRMASRGSRIVIQLKMGAKNYPDADSFNTVAEVIGSKYPEQVVLVSGHLDSWDVGQGAMDDGGGAFISWEALSLIKDLGLRPKRTLRLVLWTAEEQGGIGAFQYYQLHKANISNYSLVMESDLGTFLPSGLQFTGSEKARAIVEEVMSLLQPINITQVFGAGEGTDINFWIEAGVPGASLLDDLYKYFSFHHSHGDTMTVMDPKQMNLAAAVWAVVSYVIADLEEMLPRS
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6475544..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6771272..6771435)
location: region:6475544-6771435:1
so has part: feature:6475544-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6771272-6771435:1:exon

XP_031295225.1
type: Protein
SIO_000068: ncbiprotein

position:6475544:1
position: 6475544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6771435:1
position: 6771435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6475544-6475976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6771272-6771435:1:exon

CPQ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CPQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase Q isoform X3
translation: MKFLLFIFVGVVHLLSLNSGKAIYKNDICQRTFQEIKEEIACYGDVAKAIINLAVYGKAQNRSYERLALLVDTVGPRPSGSKSLEKAIQIMHQNLQEDGLENVHLEPVKIPHWERGEESAVMLEPRIHKMAILGLGSSIGTPPEGITAEVLVVTSFNELQRRAPEARGKIVVYNQPYTNYSRTVQYRVQGAVEAAKVGALASLIRSVASFSIYSPHTGIQEYQDGVPKIPTACITVEDAEMMSRMASRGSRIVIQLKMGAKNYPDADSFNTVAEVIGSKYPEQVVLVSGHLDSWDVGQGAMDDGGGAFISWEALSLIKDLGLRPKRTLRLVLWTAEEQGGIGAFQYYQLHKANISNYSLVMESDLGTFLPSGLQFTGSEKARAIVEEVMSLLQPINITQVFGAGEGTDINFWIEAGVPGASLLDDLYKYFSFHHSHGDTMTVMDPKQMNLAAAVWAVVSYVIADLEEMLPRS
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6475544..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6771272..6771435)
location: region:6475544-6771435:1
so has part: feature:6475544-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6771272-6771435:1:exon

XP_031295226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6475544-6475976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6771272-6771435:1:exon

CPQ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CPQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase Q isoform X2
translation: MKFLLFIFVGVVHLLSLNSGKAIYKNDICQRTFQEIKEEIACYGDVAKAIINLAVYGKAQNRSYERLALLVDTVGPRPSGSKSLEKAIQIMHQNLQEDGLENVHLEPVKIPHWERGEESAVMLEPRIHKMAILGLGSSIGTPPEGITAEVLVVTSFNELQRRAPEARGKIVVYNQPYTNYSRTVQYRVQGAVEAAKVGALASLIRSVASFSIYSPHTGIQEYQDGVPKIPTACITVEDAEMMSRMASRGSRIVIQLKMGAKNYPDADSFNTVAEVIGSKYPEQVVLVSGHLDSWDVGQGAMDDGGGAFISWEALSLIKDLGLRPKRTLRLVLWTAEEQGGIGAFQYYQLHKANISNYSLVMESDLGTFLPSGLQFTGSEKARAIVEEVMSLLQPINITQVFGAGEGTDINFWIEAGVPGAHNGGLTVIWGLLNNHEDKKEDFIMGN
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6475544..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6720173..6720258)
location: region:6475544-6720258:1
so has part: feature:6475544-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6720173-6720258:1:exon

XP_031295224.1
type: Protein
SIO_000068: ncbiprotein

position:6720258:1
position: 6720258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6475544-6475976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6720173-6720258:1:exon

CPQ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CPQ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: carboxypeptidase Q isoform X1
translation: MKFLLFIFVGVVHLLSLNSGKAIYKNDICQRTFQEIKEEIACYGDVAKAIINLAVYGKAQNRSYERLALLVDTVGPRPSGSKSLEKAIQIMHQNLQEDGLENVHLEPVKIPHWERGEESAVMLEPRIHKMAILGLGSSIGTPPEGITAEVLVVTSFNELQRRAPEARGKIVVYNQPYTNYSRTVQYRVQGAVEAAKVGALASLIRSVASFSIYSPHTGIQEYQDGVPKIPTACITVEDAEMMSRMASRGSRIVIQLKMGAKNYPDADSFNTVAEVIGSKYPEQVVLVSGHLDSWDVGQGAMDDGGGAFISWEALSLIKDLGLRPKRTLRLVLWTAEEQGGIGAFQYYQLHKANISNYSLVMESDLGTFLPSGLQFTGSEKARAIVEEVMSLLQPINITQVFGAGEGTDINFWIEAGVPGSLPEVLVHPVLSASSPSSCPVLPSAVASSSSPVVQLLAPLSQALLDRQRSG
SIO_010081: CPQ
subclass of: SO_0000673
so part of: CPQ
location: join(6475544..6475976,6508399..6508606,6559418..6559625,6639426..6639537,6684233..6684324,6711705..6711906,6717652..6717809)
location: region:6475544-6717809:1
so has part: feature:6475544-6475976:1:exon
so has part: feature:6508399-6508606:1:exon
so has part: feature:6559418-6559625:1:exon
so has part: feature:6639426-6639537:1:exon
so has part: feature:6684233-6684324:1:exon
so has part: feature:6711705-6711906:1:exon
so has part: feature:6717652-6717809:1:exon

XP_031295223.1
type: Protein
SIO_000068: ncbiprotein

position:6717809:1
position: 6717809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6475544-6475976:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6508399-6508606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6559418-6559625:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6639426-6639537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6684233-6684324:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6711705-6711906:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6717652-6717809:1:exon

LOC116148895
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148895
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6738374..6749979)
location: region:6738374-6749979:-1
so has part: feature:6738374-6749979:-1:exon
subclass of: SO_0000011

116148895
type: Gene
SIO_000068: ncbigene

position:6738374:-1
position: 6738374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6749979:-1
position: 6749979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6738374-6749979:-1:exon

LOC116148895
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148895
product: uncharacterized LOC116148895
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132472.1
SIO_010081: LOC116148895
subclass of: SO_0000673
so part of: LOC116148895
location: complement(join(6738374..6738599,6744586..6744673,6749580..6749979))
location: region:6738374-6749979:-1
so has part: feature:6749580-6749979:-1:exon
so has part: feature:6744586-6744673:-1:exon
so has part: feature:6738374-6738599:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6749580-6749979:-1:exon

position:6749580:-1
position: 6749580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6744586-6744673:-1:exon

position:6744586:-1
position: 6744586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6744673:-1
position: 6744673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6738374-6738599:-1:exon

position:6738599:-1
position: 6738599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148896
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6780176..6788936
location: region:6780176-6788936:1
so has part: feature:6780176-6788936:1:exon
subclass of: SO_0000011

116148896
type: Gene
SIO_000068: ncbigene

position:6780176:1
position: 6780176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6788936:1
position: 6788936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6780176-6788936:1:exon

LOC116148896
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148896
product: uncharacterized LOC116148896
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004132473.1
SIO_010081: LOC116148896
subclass of: SO_0000673
so part of: LOC116148896
location: join(6780176..6780386,6785367..6785504,6786498..6788936)
location: region:6780176-6788936:1
so has part: feature:6780176-6780386:1:exon
so has part: feature:6785367-6785504:1:exon
so has part: feature:6786498-6788936:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6780176-6780386:1:exon

position:6780386:1
position: 6780386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6785367-6785504:1:exon

position:6785367:1
position: 6785367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6785504:1
position: 6785504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6786498-6788936:1:exon