Camelus dromedarius isolate Drom800 breed African chromosome 24, CamDro3, whole genome shotgun sequence.
type: Entry
definition: Camelus dromedarius isolate Drom800 breed African chromosome 24, CamDro3, whole genome shotgun sequence.
sequence version: NC_044534.1
sequence date: 2019-10-23
sequence: sequence
division: CON
label: NC_044534.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA565028
dblink: SAMN03252735
keyword: WGS
keyword: RefSeq
source: Camelus dromedarius (Arabian camel)
organism: Camelus dromedarius
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Tylopoda; Camelidae; Camelus.
reference: 1
references: 30972949
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM016650.2.\nAssembly name: CamDro3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vetmeduni Vienna on\n2019/10/07. The original whole-genome shotgun project has the\naccession JWIN00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vetmeduni Vienna\nAssembly Date :: FEB-2019\nAssembly Method :: ABySS v. 1.3.6; HiRise v. MAY-2017;\n PBJelly v. 15.8.24; Pilon v. 1.22; ABySS\n Sealer v. 2.0.2; HiRise v. MAY-2018;\n PBJelly v. 15.8.24; BBMAP-CallVariants v.\n 38.12; ABySS Sealer v. 2.1.0\nAssembly Name :: CamDro3\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: Illumina HiSeq; Dovetail Hi-C and\n Chicago; PacBio Sequel\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Camelus dromedarius Annotation\n Release 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.2\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 24767672
topology: linear
so has quality: SO_0000987
location: 1..24767672
location: region:1-24767672:1
RO_0002162: 9838

NC_044534
type: RefSeq
SIO_000068: refseq

PRJNA565028
type: BioProject
SIO_000068: bioproject

SAMN03252735
type: BioSample
SIO_000068: biosample

1
title: Improving Illumina assemblies with Hi-C and long reads: An example with the North African dromedary
author: Elbers, J.P.
author: Rogers, M.F.
author: Perelman, P.L.
author: Proskuryakova, A.A.
author: Serdyukova, N.A.
author: Johnson, W.E.
author: Horin, P.
author: Corander, J.
author: Murphy, D.
author: Burger, P.A.
journal: Mol Ecol Resour
volume: 19
issue: 4
pages: 1015-1026
year: 2019
pubmed: 30972949

30972949
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24767672:1
position: 24767672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24767672:1:source
so part of: sequence
organism: Camelus dromedarius
mol type: genomic DNA
isolate: Drom800
isolation source: isolated from an animal called Varis
chromosome: 24
sex: female
tissue type: blood
dev stage: adult
country: Austria: Eithental
collection date: 13-Jan-2013
collected by: Pamela Burger
breed: African

9838
type: Taxonomy
SIO_000068: taxonomy

LOC116148824
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148824
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(426374..432665)
location: region:426374-432665:-1
so has part: feature:426374-432665:-1:exon
subclass of: SO_0000011

116148824
type: Gene
SIO_000068: ncbigene

position:426374:-1
position: 426374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432665:-1
position: 432665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:426374-432665:-1:exon

LOC116148824
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148824
product: uncharacterized LOC116148824
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132423.1
SIO_010081: LOC116148824
subclass of: SO_0000673
so part of: LOC116148824
location: complement(join(426374..426396,428756..428762,432591..432665))
location: region:426374-432665:-1
so has part: feature:432591-432665:-1:exon
so has part: feature:428756-428762:-1:exon
so has part: feature:426374-426396:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:432591-432665:-1:exon

position:432591:-1
position: 432591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:428756-428762:-1:exon

position:428756:-1
position: 428756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:428762:-1
position: 428762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:426374-426396:-1:exon

position:426396:-1
position: 426396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148776
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148776
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 758256..907346
location: region:758256-907346:1
so has part: feature:758256-907346:1:exon
subclass of: SO_0000011

116148776
type: Gene
SIO_000068: ncbigene

position:758256:1
position: 758256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:907346:1
position: 907346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:758256-907346:1:exon

LOC116148776
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148776
product: uncharacterized LOC116148776
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_004132311.1
SIO_010081: LOC116148776
subclass of: SO_0000673
so part of: LOC116148776
location: join(758256..758384,875361..875693,906958..907346)
location: region:758256-907346:1
so has part: feature:758256-758384:1:exon
so has part: feature:875361-875693:1:exon
so has part: feature:906958-907346:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:758256-758384:1:exon

position:758384:1
position: 758384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:875361-875693:1:exon

position:875361:1
position: 875361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:875693:1
position: 875693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:906958-907346:1:exon

position:906958:1
position: 906958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148775
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148775
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 880615..901549
location: region:880615-901549:1
so has part: feature:880615-901549:1:exon
subclass of: SO_0000011

116148775
type: Gene
SIO_000068: ncbigene

position:880615:1
position: 880615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:901549:1
position: 901549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:880615-901549:1:exon

LOC116148775
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148775
product: uncharacterized LOC116148775
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004132310.1
SIO_010081: LOC116148775
subclass of: SO_0000673
so part of: LOC116148775
location: join(880615..880794,901309..901549)
location: region:880615-901549:1
so has part: feature:880615-880794:1:exon
so has part: feature:901309-901549:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:880615-880794:1:exon

position:880794:1
position: 880794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901309-901549:1:exon

position:901309:1
position: 901309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148845
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148845
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(926560..926721)
location: region:926560-926721:-1
so has part: feature:926560-926721:-1:exon
subclass of: SO_0000623

116148845
type: Gene
SIO_000068: ncbigene

position:926560:-1
position: 926560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:926721:-1
position: 926721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926560-926721:-1:exon

LOC116148845
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116148845
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132443.1
SIO_010081: LOC116148845
subclass of: SO_0000673
so part of: LOC116148845
location: complement(926560..926721)
location: region:926560-926721:-1
so has part: feature:926560-926721:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926560-926721:-1:exon

LOC105104540
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105104540
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(960181..1064357)
location: region:960181-1064357:-1
so has part: feature:960181-1064357:-1:exon
subclass of: SO_0000011

105104540
type: Gene
SIO_000068: ncbigene

position:960181:-1
position: 960181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1064357:-1
position: 1064357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:960181-1064357:-1:exon

LOC105104540
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105104540
product: uncharacterized LOC105104540, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132313.1
SIO_010081: LOC105104540
subclass of: SO_0000673
so part of: LOC105104540
location: complement(join(960181..962289,986888..986906,991058..991366,994544..994740,1023390..1023476,1033944..1034046,1041175..1041250,1052563..1052662,1063748..1064357))
location: region:960181-1064357:-1
so has part: feature:1063748-1064357:-1:exon
so has part: feature:1052563-1052662:-1:exon
so has part: feature:1041175-1041250:-1:exon
so has part: feature:1033944-1034046:-1:exon
so has part: feature:1023390-1023476:-1:exon
so has part: feature:994544-994740:-1:exon
so has part: feature:991058-991366:-1:exon
so has part: feature:986888-986906:-1:exon
so has part: feature:960181-962289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063748-1064357:-1:exon

position:1063748:-1
position: 1063748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1052563-1052662:-1:exon

position:1052563:-1
position: 1052563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1052662:-1
position: 1052662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1041175-1041250:-1:exon

position:1041175:-1
position: 1041175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1041250:-1
position: 1041250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1033944-1034046:-1:exon

position:1033944:-1
position: 1033944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1034046:-1
position: 1034046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1023390-1023476:-1:exon

position:1023390:-1
position: 1023390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1023476:-1
position: 1023476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:994544-994740:-1:exon

position:994544:-1
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reference: sequence
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type: ExactPosition

position:994740:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:991058-991366:-1:exon

position:991058:-1
position: 991058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:991366:-1
position: 991366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:986888-986906:-1:exon

position:986888:-1
position: 986888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:986906:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:960181-962289:-1:exon

position:962289:-1
position: 962289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105104540
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105104540
product: uncharacterized LOC105104540, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004132315.1
SIO_010081: LOC105104540
subclass of: SO_0000673
so part of: LOC105104540
location: complement(join(960181..962289,986888..986906,991058..991366,994544..994740,1023390..1023476,1040298..1040399,1041175..1041250,1052563..1052662,1063748..1064357))
location: region:960181-1064357:-1
so has part: feature:1063748-1064357:-1:exon
so has part: feature:1052563-1052662:-1:exon
so has part: feature:1041175-1041250:-1:exon
so has part: feature:1040298-1040399:-1:exon
so has part: feature:1023390-1023476:-1:exon
so has part: feature:994544-994740:-1:exon
so has part: feature:991058-991366:-1:exon
so has part: feature:986888-986906:-1:exon
so has part: feature:960181-962289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063748-1064357:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052563-1052662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1041175-1041250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1040298-1040399:-1:exon

position:1040298:-1
position: 1040298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1040399:-1
position: 1040399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1023390-1023476:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:994544-994740:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:991058-991366:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:986888-986906:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:960181-962289:-1:exon

LOC105104540
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105104540
product: uncharacterized LOC105104540, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132314.1
SIO_010081: LOC105104540
subclass of: SO_0000673
so part of: LOC105104540
location: complement(join(960181..962289,986888..986906,991058..991366,994544..994740,1023390..1023476,1033944..1034046,1052563..1052662,1063748..1064355))
location: region:960181-1064355:-1
so has part: feature:1063748-1064355:-1:exon
so has part: feature:1052563-1052662:-1:exon
so has part: feature:1033944-1034046:-1:exon
so has part: feature:1023390-1023476:-1:exon
so has part: feature:994544-994740:-1:exon
so has part: feature:991058-991366:-1:exon
so has part: feature:986888-986906:-1:exon
so has part: feature:960181-962289:-1:exon

position:1064355:-1
position: 1064355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063748-1064355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052563-1052662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1033944-1034046:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023390-1023476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994544-994740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:991058-991366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986888-986906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960181-962289:-1:exon

LOC105104540
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105104540
product: uncharacterized LOC105104540, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004132316.1
SIO_010081: LOC105104540
subclass of: SO_0000673
so part of: LOC105104540
location: complement(join(960181..962289,986888..986906,991058..991366,994544..994740,1023390..1023476,1041175..1041250,1052563..1052662,1063748..1064355))
location: region:960181-1064355:-1
so has part: feature:1063748-1064355:-1:exon
so has part: feature:1052563-1052662:-1:exon
so has part: feature:1041175-1041250:-1:exon
so has part: feature:1023390-1023476:-1:exon
so has part: feature:994544-994740:-1:exon
so has part: feature:991058-991366:-1:exon
so has part: feature:986888-986906:-1:exon
so has part: feature:960181-962289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1063748-1064355:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052563-1052662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1041175-1041250:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1023390-1023476:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:994544-994740:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:991058-991366:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:986888-986906:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:960181-962289:-1:exon

LOC105104540
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105104540
product: uncharacterized LOC105104540, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004132312.1
SIO_010081: LOC105104540
subclass of: SO_0000673
so part of: LOC105104540
location: complement(join(960181..962289,986888..986906,991058..991366,994544..994740,1023390..1023476,1052563..1052662,1063748..1064352))
location: region:960181-1064352:-1
so has part: feature:1063748-1064352:-1:exon
so has part: feature:1052563-1052662:-1:exon
so has part: feature:1023390-1023476:-1:exon
so has part: feature:994544-994740:-1:exon
so has part: feature:991058-991366:-1:exon
so has part: feature:986888-986906:-1:exon
so has part: feature:960181-962289:-1:exon

position:1064352:-1
position: 1064352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1063748-1064352:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1052563-1052662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1023390-1023476:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:994544-994740:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:991058-991366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:986888-986906:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:960181-962289:-1:exon

LOC116148844
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148844
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1029982..1030115
location: region:1029982-1030115:1
so has part: feature:1029982-1030115:1:exon
subclass of: SO_0000578

116148844
type: Gene
SIO_000068: ncbigene

position:1029982:1
position: 1029982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030115:1
position: 1030115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029982-1030115:1:exon

LOC116148844
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snoRNA
gene: LOC116148844
product: small nucleolar RNA SNORA70
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132442.1
SIO_010081: LOC116148844
subclass of: SO_0000673
so part of: LOC116148844
location: 1029982..1030115
location: region:1029982-1030115:1
so has part: feature:1029982-1030115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1029982-1030115:1:exon

LOC105100075
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1276828..1377712
location: region:1276828-1377712:1
so has part: feature:1276828-1377712:1:exon
subclass of: SO_0000011

105100075
type: Gene
SIO_000068: ncbigene

position:1276828:1
position: 1276828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1377712:1
position: 1377712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1276828-1377712:1:exon

LOC105100075
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105100075
product: uncharacterized LOC105100075
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132317.1
SIO_010081: LOC105100075
subclass of: SO_0000673
so part of: LOC105100075
location: join(1276828..1277040,1281311..1281542,1282781..1283592,1285708..1285848,1288457..1289313,1318201..1318329,1371558..1371705,1377219..1377712)
location: region:1276828-1377712:1
so has part: feature:1276828-1277040:1:exon
so has part: feature:1281311-1281542:1:exon
so has part: feature:1282781-1283592:1:exon
so has part: feature:1285708-1285848:1:exon
so has part: feature:1288457-1289313:1:exon
so has part: feature:1318201-1318329:1:exon
so has part: feature:1371558-1371705:1:exon
so has part: feature:1377219-1377712:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1276828-1277040:1:exon

position:1277040:1
position: 1277040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1281311-1281542:1:exon

position:1281311:1
position: 1281311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1281542:1
position: 1281542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282781-1283592:1:exon

position:1282781:1
position: 1282781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283592:1
position: 1283592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1285708-1285848:1:exon

position:1285708:1
position: 1285708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285848:1
position: 1285848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1288457-1289313:1:exon

position:1288457:1
position: 1288457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1289313:1
position: 1289313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1318201-1318329:1:exon

position:1318201:1
position: 1318201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1318329:1
position: 1318329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1371558-1371705:1:exon

position:1371558:1
position: 1371558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1371705:1
position: 1371705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1377219-1377712:1:exon

position:1377219:1
position: 1377219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148778
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1350044..1359991
location: region:1350044-1359991:1
so has part: feature:1350044-1359991:1:exon

116148778
type: Gene
SIO_000068: ncbigene

position:1350044:1
position: 1350044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359991:1
position: 1359991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1350044-1359991:1:exon

LOC116148778
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116148778
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116148778
subclass of: SO_0000673
so part of: LOC116148778
location: 1350044..1359991
location: region:1350044-1359991:1
so has part: feature:1350044-1359991:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1350044-1359991:1:exon

LOC105100077
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1382578..1383100)
location: region:1382578-1383100:-1
so has part: feature:1382578-1383100:-1:exon

105100077
type: Gene
SIO_000068: ncbigene

position:1382578:-1
position: 1382578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383100:-1
position: 1383100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1382578-1383100:-1:exon

LOC105100077
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 48% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100077
subclass of: SO_0000673
so part of: LOC105100077
location: complement(1382578..1383100)
location: region:1382578-1383100:-1
so has part: feature:1382578-1383100:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1382578-1383100:-1:exon

LOC105100082
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1383108..1384089)
location: region:1383108-1384089:-1
so has part: feature:1383108-1384089:-1:exon

105100082
type: Gene
SIO_000068: ncbigene

position:1383108:-1
position: 1383108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1384089:-1
position: 1384089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383108-1384089:-1:exon

LOC105100082
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100082
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 28% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100082
subclass of: SO_0000673
so part of: LOC105100082
location: complement(1383108..1384089)
location: region:1383108-1384089:-1
so has part: feature:1383108-1384089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1383108-1384089:-1:exon

LOC105100084
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1387335..1390127
location: region:1387335-1390127:1
so has part: feature:1387335-1390127:1:exon

105100084
type: Gene
SIO_000068: ncbigene

position:1387335:1
position: 1387335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1390127:1
position: 1390127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387335-1390127:1:exon

LOC105100084
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100084
subclass of: SO_0000673
so part of: LOC105100084
location: 1387335..1388920
location: region:1387335-1388920:1
so has part: feature:1387335-1388920:1:exon

position:1388920:1
position: 1388920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387335-1388920:1:exon

LOC105100084
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100084
subclass of: SO_0000673
so part of: LOC105100084
location: 1389176..1390127
location: region:1389176-1390127:1
so has part: feature:1389176-1390127:1:exon

position:1389176:1
position: 1389176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389176-1390127:1:exon

LOC105100076
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1393155..1415288
location: region:1393155-1415288:1
so has part: feature:1393155-1415288:1:exon
subclass of: SO_0000011

105100076
type: Gene
SIO_000068: ncbigene

position:1393155:1
position: 1393155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415288:1
position: 1415288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393155-1415288:1:exon

LOC105100076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105100076
product: uncharacterized LOC105100076, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_004132319.1
SIO_010081: LOC105100076
subclass of: SO_0000673
so part of: LOC105100076
location: join(1393155..1393176,1411195..1411351,1412522..1412566,1415065..1415288)
location: region:1393155-1415288:1
so has part: feature:1393155-1393176:1:exon
so has part: feature:1411195-1411351:1:exon
so has part: feature:1412522-1412566:1:exon
so has part: feature:1415065-1415288:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1393155-1393176:1:exon

position:1393176:1
position: 1393176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1411195-1411351:1:exon

position:1411195:1
position: 1411195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411351:1
position: 1411351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1412522-1412566:1:exon

position:1412522:1
position: 1412522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412566:1
position: 1412566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1415065-1415288:1:exon

position:1415065:1
position: 1415065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105100076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105100076
product: uncharacterized LOC105100076, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004132318.1
SIO_010081: LOC105100076
subclass of: SO_0000673
so part of: LOC105100076
location: join(1393163..1393176,1401857..1401961,1411195..1411351,1412522..1412566,1415065..1415288)
location: region:1393163-1415288:1
so has part: feature:1393163-1393176:1:exon
so has part: feature:1401857-1401961:1:exon
so has part: feature:1411195-1411351:1:exon
so has part: feature:1412522-1412566:1:exon
so has part: feature:1415065-1415288:1:exon

position:1393163:1
position: 1393163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1393163-1393176:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401857-1401961:1:exon

position:1401857:1
position: 1401857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401961:1
position: 1401961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1411195-1411351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1412522-1412566:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1415065-1415288:1:exon

LOC105100076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105100076
product: uncharacterized LOC105100076, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XR_838143.2
SIO_010081: LOC105100076
subclass of: SO_0000673
so part of: LOC105100076
location: join(1399261..1401961,1411195..1411351,1412522..1412566,1415065..1415288)
location: region:1399261-1415288:1
so has part: feature:1399261-1401961:1:exon
so has part: feature:1411195-1411351:1:exon
so has part: feature:1412522-1412566:1:exon
so has part: feature:1415065-1415288:1:exon

position:1399261:1
position: 1399261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399261-1401961:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1411195-1411351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412522-1412566:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415065-1415288:1:exon

LOC105100076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105100076
product: uncharacterized LOC105100076, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_004132320.1
SIO_010081: LOC105100076
subclass of: SO_0000673
so part of: LOC105100076
location: join(1403417..1403437,1411195..1411351,1412522..1412566,1415065..1415288)
location: region:1403417-1415288:1
so has part: feature:1403417-1403437:1:exon
so has part: feature:1411195-1411351:1:exon
so has part: feature:1412522-1412566:1:exon
so has part: feature:1415065-1415288:1:exon

position:1403417:1
position: 1403417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403417-1403437:1:exon

position:1403437:1
position: 1403437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1411195-1411351:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1412522-1412566:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1415065-1415288:1:exon

LOC116148777
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148777
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1415679..1418838)
location: region:1415679-1418838:-1
so has part: feature:1415679-1418838:-1:exon

116148777
type: Gene
SIO_000068: ncbigene

position:1415679:-1
position: 1415679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418838:-1
position: 1418838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1415679-1418838:-1:exon

LOC116148777
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116148777
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116148777
subclass of: SO_0000673
so part of: LOC116148777
location: complement(1415679..1418838)
location: region:1415679-1418838:-1
so has part: feature:1415679-1418838:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1415679-1418838:-1:exon

LOC105100086
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100086
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1428169..1437435
location: region:1428169-1437435:1
so has part: feature:1428169-1437435:1:exon

105100086
type: Gene
SIO_000068: ncbigene

position:1428169:1
position: 1428169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1437435:1
position: 1437435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428169-1437435:1:exon

LOC105100086
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100086
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100086
subclass of: SO_0000673
so part of: LOC105100086
location: 1428169..1428190
location: region:1428169-1428190:1
so has part: feature:1428169-1428190:1:exon

position:1428190:1
position: 1428190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428169-1428190:1:exon

LOC105100086
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100086
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100086
subclass of: SO_0000673
so part of: LOC105100086
location: 1435163..1437435
location: region:1435163-1437435:1
so has part: feature:1435163-1437435:1:exon

position:1435163:1
position: 1435163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1435163-1437435:1:exon

LOC116148779
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148779
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1504116..1506952)
location: region:1504116-1506952:-1
so has part: feature:1504116-1506952:-1:exon

116148779
type: Gene
SIO_000068: ncbigene

position:1504116:-1
position: 1504116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506952:-1
position: 1506952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1504116-1506952:-1:exon

LOC116148779
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116148779
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116148779
subclass of: SO_0000673
so part of: LOC116148779
location: complement(1504116..1504800)
location: region:1504116-1504800:-1
so has part: feature:1504116-1504800:-1:exon

position:1504800:-1
position: 1504800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1504116-1504800:-1:exon

LOC116148779
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116148779
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116148779
subclass of: SO_0000673
so part of: LOC116148779
location: complement(1504906..1506952)
location: region:1504906-1506952:-1
so has part: feature:1504906-1506952:-1:exon

position:1504906:-1
position: 1504906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1504906-1506952:-1:exon

LOC116148773
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1520056..1522867
location: region:1520056-1522867:1
so has part: feature:1520056-1522867:1:exon

116148773
type: Gene
SIO_000068: ncbigene

position:1520056:1
position: 1520056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522867:1
position: 1522867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1520056-1522867:1:exon

LOC116148773
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116148773
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116148773
subclass of: SO_0000673
so part of: LOC116148773
location: 1520056..1520133
location: region:1520056-1520133:1
so has part: feature:1520056-1520133:1:exon

position:1520133:1
position: 1520133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1520056-1520133:1:exon

LOC116148773
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC116148773
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC116148773
subclass of: SO_0000673
so part of: LOC116148773
location: 1522204..1522867
location: region:1522204-1522867:1
so has part: feature:1522204-1522867:1:exon

position:1522204:1
position: 1522204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1522204-1522867:1:exon

LOC105100087
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105100087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1554442..1557007
location: region:1554442-1557007:1
so has part: feature:1554442-1557007:1:exon

105100087
type: Gene
SIO_000068: ncbigene

position:1554442:1
position: 1554442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1557007:1
position: 1557007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1554442-1557007:1:exon

LOC105100087
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105100087
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105100087
subclass of: SO_0000673
so part of: LOC105100087
location: 1554442..1557007
location: region:1554442-1557007:1
so has part: feature:1554442-1557007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1554442-1557007:1:exon

SYT4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SYT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1597492..1607642
location: region:1597492-1607642:1
so has part: feature:1597492-1607642:1:exon
subclass of: SO_0000010

105085254
type: Gene
SIO_000068: ncbigene

position:1597492:1
position: 1597492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1607642:1
position: 1607642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597492-1607642:1:exon

SYT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SYT4
product: synaptotagmin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010975490.2
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(1597492..1597860,1600780..1601594,1603309..1603429,1604919..1607642)
location: region:1597492-1607642:1
so has part: feature:1597492-1597860:1:exon
so has part: feature:1600780-1601594:1:exon
so has part: feature:1603309-1603429:1:exon
so has part: feature:1604919-1607642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1597492-1597860:1:exon

position:1597860:1
position: 1597860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1600780-1601594:1:exon

position:1600780:1
position: 1600780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1601594:1
position: 1601594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1603309-1603429:1:exon

position:1603309:1
position: 1603309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1603429:1
position: 1603429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1604919-1607642:1:exon

position:1604919:1
position: 1604919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SYT4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SYT4
product: synaptotagmin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_010975491.2
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(1597492..1597860,1600780..1601594,1603312..1603429,1604919..1607642)
location: region:1597492-1607642:1
so has part: feature:1597492-1597860:1:exon
so has part: feature:1600780-1601594:1:exon
so has part: feature:1603312-1603429:1:exon
so has part: feature:1604919-1607642:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1597492-1597860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600780-1601594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1603312-1603429:1:exon

position:1603312:1
position: 1603312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1604919-1607642:1:exon

SYT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SYT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-4 isoform X1
translation: MAPIASSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVLKGVDIYPENLNSKKKFGADEKNEVKNTPAAPKNSLHLDLEKRDLNGNFPKTNLKAGSPSDLENVTPKLSSEGEKEAVSPDSLKSSTSLASDEKQEKLGALVFSLEYNFEKKAFMVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLAGIELTGGKMLMNREIIKRNVRKSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEEISVEFLVLDSERGSRNEVIGRLVLGAAAEGTGGEHWKEICDYPRRQIAKWHVLCDG
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(1597827..1597860,1600780..1601594,1603309..1603429,1604919..1605226)
location: region:1597827-1605226:1
so has part: feature:1597827-1597860:1:exon
so has part: feature:1600780-1601594:1:exon
so has part: feature:1603309-1603429:1:exon
so has part: feature:1604919-1605226:1:exon

XP_010973792.1
type: Protein
SIO_000068: ncbiprotein

position:1597827:1
position: 1597827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1605226:1
position: 1605226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597827-1597860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600780-1601594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1603309-1603429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1604919-1605226:1:exon

SYT4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SYT4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: synaptotagmin-4 isoform X2
translation: MAPIASSREEFDEIPTVVGIFSAFGLVFTVSLFAWICCQRKSSKSNKTPPYKFVHVLKGVDIYPENLNSKKKFGADEKNEVKNTPAAPKNSLHLDLEKRDLNGNFPKTNLKAGSPSDLENVTPKLSSEGEKEAVSPDSLKSSTSLASDEKQEKLGALVFSLEYNFEKKAFMVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLAGIELTGGKMLMNREIIKRNVRSSGRGELLISLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCEGLEEISVEFLVLDSERGSRNEVIGRLVLGAAAEGTGGEHWKEICDYPRRQIAKWHVLCDG
SIO_010081: SYT4
subclass of: SO_0000673
so part of: SYT4
location: join(1597827..1597860,1600780..1601594,1603312..1603429,1604919..1605226)
location: region:1597827-1605226:1
so has part: feature:1597827-1597860:1:exon
so has part: feature:1600780-1601594:1:exon
so has part: feature:1603312-1603429:1:exon
so has part: feature:1604919-1605226:1:exon

XP_010973793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1597827-1597860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1600780-1601594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1603312-1603429:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1604919-1605226:1:exon

LOC105085255
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105085255
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1663086..1664851)
location: region:1663086-1664851:-1
so has part: feature:1663086-1664851:-1:exon

105085255
type: Gene
SIO_000068: ncbigene

position:1663086:-1
position: 1663086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664851:-1
position: 1664851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663086-1664851:-1:exon

LOC105085255
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085255
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085255
subclass of: SO_0000673
so part of: LOC105085255
location: complement(1663086..1663707)
location: region:1663086-1663707:-1
so has part: feature:1663086-1663707:-1:exon

position:1663707:-1
position: 1663707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663086-1663707:-1:exon

LOC105085255
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085255
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085255
subclass of: SO_0000673
so part of: LOC105085255
location: complement(1663952..1664225)
location: region:1663952-1664225:-1
so has part: feature:1663952-1664225:-1:exon

position:1663952:-1
position: 1663952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664225:-1
position: 1664225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1663952-1664225:-1:exon

LOC105085255
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105085255
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105085255
subclass of: SO_0000673
so part of: LOC105085255
location: complement(1664845..1664851)
location: region:1664845-1664851:-1
so has part: feature:1664845-1664851:-1:exon

position:1664845:-1
position: 1664845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1664845-1664851:-1:exon

TRNAV-AAC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAV-AAC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1709287..1709358)
location: region:1709287-1709358:-1
so has part: feature:1709287-1709358:-1:exon
subclass of: SO_0000663

116148855
type: Gene
SIO_000068: ncbigene

position:1709287:-1
position: 1709287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1709358:-1
position: 1709358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1709287-1709358:-1:exon

TRNAV-AAC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAV-AAC
product: tRNA-Val
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA valine (anticodon AAC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1709324..1709326),aa:Val, seq:aac)
SIO_010081: TRNAV-AAC
subclass of: SO_0000673
so part of: TRNAV-AAC
location: complement(1709287..1709358)
location: region:1709287-1709358:-1
so has part: feature:1709287-1709358:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1709287-1709358:-1:exon

LOC116148842
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148842
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(2026226..2026332)
location: region:2026226-2026332:-1
so has part: feature:2026226-2026332:-1:exon
subclass of: SO_0000623

116148842
type: Gene
SIO_000068: ncbigene

position:2026226:-1
position: 2026226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2026332:-1
position: 2026332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2026226-2026332:-1:exon

LOC116148842
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: snRNA
gene: LOC116148842
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004132440.1
SIO_010081: LOC116148842
subclass of: SO_0000673
so part of: LOC116148842
location: complement(2026226..2026332)
location: region:2026226-2026332:-1
so has part: feature:2026226-2026332:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2026226-2026332:-1:exon

TRNAT-AGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAT-AGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(2458767..2458839)
location: region:2458767-2458839:-1
so has part: feature:2458767-2458839:-1:exon
subclass of: SO_0000663

116148856
type: Gene
SIO_000068: ncbigene

position:2458767:-1
position: 2458767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2458839:-1
position: 2458839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2458767-2458839:-1:exon

TRNAT-AGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAT-AGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon AGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(2458804..2458806),aa:Thr, seq:agt)
SIO_010081: TRNAT-AGU
subclass of: SO_0000673
so part of: TRNAT-AGU
location: complement(2458767..2458839)
location: region:2458767-2458839:-1
so has part: feature:2458767-2458839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2458767-2458839:-1:exon

PIK3C3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2462935..2579586)
location: region:2462935-2579586:-1
so has part: feature:2462935-2579586:-1:exon
subclass of: SO_0000010

105085253
type: Gene
SIO_000068: ncbigene

position:2462935:-1
position: 2462935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579586:-1
position: 2579586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2462935-2579586:-1:exon

PIK3C3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: PIK3C3
product: phosphatidylinositol 3-kinase catalytic subunit type 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010975489.2
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(2462935..2466096,2473421..2473546,2478778..2478868,2485312..2485480,2494684..2494758,2501469..2501553,2503909..2503973,2505975..2506044,2506783..2506911,2509210..2509341,2512662..2512778,2514158..2514263,2520167..2520234,2522970..2523060,2524703..2524857,2530663..2530848,2538955..2539047,2539694..2539798,2542806..2542877,2545449..2545544,2547461..2547547,2564036..2564165,2571180..2571323,2576020..2576208,2579412..2579586))
location: region:2462935-2579586:-1
so has part: feature:2579412-2579586:-1:exon
so has part: feature:2576020-2576208:-1:exon
so has part: feature:2571180-2571323:-1:exon
so has part: feature:2564036-2564165:-1:exon
so has part: feature:2547461-2547547:-1:exon
so has part: feature:2545449-2545544:-1:exon
so has part: feature:2542806-2542877:-1:exon
so has part: feature:2539694-2539798:-1:exon
so has part: feature:2538955-2539047:-1:exon
so has part: feature:2530663-2530848:-1:exon
so has part: feature:2524703-2524857:-1:exon
so has part: feature:2522970-2523060:-1:exon
so has part: feature:2520167-2520234:-1:exon
so has part: feature:2514158-2514263:-1:exon
so has part: feature:2512662-2512778:-1:exon
so has part: feature:2509210-2509341:-1:exon
so has part: feature:2506783-2506911:-1:exon
so has part: feature:2505975-2506044:-1:exon
so has part: feature:2503909-2503973:-1:exon
so has part: feature:2501469-2501553:-1:exon
so has part: feature:2494684-2494758:-1:exon
so has part: feature:2485312-2485480:-1:exon
so has part: feature:2478778-2478868:-1:exon
so has part: feature:2473421-2473546:-1:exon
so has part: feature:2462935-2466096:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2579412-2579586:-1:exon

position:2579412:-1
position: 2579412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2576020-2576208:-1:exon

position:2576020:-1
position: 2576020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2576208:-1
position: 2576208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2571180-2571323:-1:exon

position:2571180:-1
position: 2571180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571323:-1
position: 2571323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2564036-2564165:-1:exon

position:2564036:-1
position: 2564036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2564165:-1
position: 2564165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2547461-2547547:-1:exon

position:2547461:-1
position: 2547461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2547547:-1
position: 2547547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2545449-2545544:-1:exon

position:2545449:-1
position: 2545449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2545544:-1
position: 2545544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2542806-2542877:-1:exon

position:2542806:-1
position: 2542806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2542877:-1
position: 2542877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2539694-2539798:-1:exon

position:2539694:-1
position: 2539694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539798:-1
position: 2539798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2538955-2539047:-1:exon

position:2538955:-1
position: 2538955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2539047:-1
position: 2539047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2530663-2530848:-1:exon

position:2530663:-1
position: 2530663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2530848:-1
position: 2530848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2524703-2524857:-1:exon

position:2524703:-1
position: 2524703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2524857:-1
position: 2524857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2522970-2523060:-1:exon

position:2522970:-1
position: 2522970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2523060:-1
position: 2523060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2520167-2520234:-1:exon

position:2520167:-1
position: 2520167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2520234:-1
position: 2520234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2514158-2514263:-1:exon

position:2514158:-1
position: 2514158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2514263:-1
position: 2514263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2512662-2512778:-1:exon

position:2512662:-1
position: 2512662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512778:-1
position: 2512778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2509210-2509341:-1:exon

position:2509210:-1
position: 2509210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2509341:-1
position: 2509341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2506783-2506911:-1:exon

position:2506783:-1
position: 2506783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2506911:-1
position: 2506911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2505975-2506044:-1:exon

position:2505975:-1
position: 2505975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2506044:-1
position: 2506044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2503909-2503973:-1:exon

position:2503909:-1
position: 2503909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503973:-1
position: 2503973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2501469-2501553:-1:exon

position:2501469:-1
position: 2501469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2501553:-1
position: 2501553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2494684-2494758:-1:exon

position:2494684:-1
position: 2494684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2494758:-1
position: 2494758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2485312-2485480:-1:exon

position:2485312:-1
position: 2485312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2485480:-1
position: 2485480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2478778-2478868:-1:exon

position:2478778:-1
position: 2478778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2478868:-1
position: 2478868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2473421-2473546:-1:exon

position:2473421:-1
position: 2473421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2473546:-1
position: 2473546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2462935-2466096:-1:exon

position:2466096:-1
position: 2466096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIK3C3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: PIK3C3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 3-kinase catalytic subunit type 3
translation: MGEAEKFHYIYSCDLDINVQLKIGSLEGKREQKSYKAVLEDPMLRFSGLYQETCSDLYVTCQVFAEGKPLALPVRTSYKAFSTRWNWNEWLKLPVKYPDLPRNAQVALTIWDVYGPGKAVPVGGTTVSLFGKYGMFRQGMHDLKVWPNVEADGSEPTKTPGRTSSTVSEDQMSRLAKLTKAHRQGHMVKVDWLDRLTFREIEMINESEKRSSNFMYLMVEFRCVKCDDKEYGIVYYEKDGDESSPILTSFEIVKVPDPQMSMENLVESKHHKLARSLRSGPSDHDLKPNAATRDQLNIIVSYPPTKQLTYEEQDLVWKFRYYLTNQEKALTKFLKCVNWDLPQEAKQALELLGKWKPMDVEDSLELLSSHYTNPTVRRYAVARLRQADDEDLLMYLLQLVQALKYENFDDIKNGLEPTKKDAQGSVSEGVSNSGINPAEVESSQIITSPLPPVSSPPPASKTKESSDGENLEQDLCTFLISRACKNSTLANYLYWYVIVECEDQDTQQRDPKTHEMYLNVMRRFSQALLKGDKSVRVMRSLLAAQQTFVDRLVHLMKAVQRESGNRKKKNERLQALLGDNEKMNLSDVELIPLPLEPQVKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLLRKENLDLKLTPYKVLATSTKHGFMQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGVGDRHLDNLLLTKTGKLFHIDFGYILGRDPKPLPPPMKLNKEMVEGMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPDKTVKKVQDKFRLDLSDEEAVHYMQSLIDESVHALFAAVVEQIHKFAQYWRK
SIO_010081: PIK3C3
subclass of: SO_0000673
so part of: PIK3C3
location: complement(join(2466082..2466096,2473421..2473546,2478778..2478868,2485312..2485480,2494684..2494758,2501469..2501553,2503909..2503973,2505975..2506044,2506783..2506911,2509210..2509341,2512662..2512778,2514158..2514263,2520167..2520234,2522970..2523060,2524703..2524857,2530663..2530848,2538955..2539047,2539694..2539798,2542806..2542877,2545449..2545544,2547461..2547547,2564036..2564165,2571180..2571323,2576020..2576208,2579412..2579479))
location: region:2466082-2579479:-1
so has part: feature:2579412-2579479:-1:exon
so has part: feature:2576020-2576208:-1:exon
so has part: feature:2571180-2571323:-1:exon
so has part: feature:2564036-2564165:-1:exon
so has part: feature:2547461-2547547:-1:exon
so has part: feature:2545449-2545544:-1:exon
so has part: feature:2542806-2542877:-1:exon
so has part: feature:2539694-2539798:-1:exon
so has part: feature:2538955-2539047:-1:exon
so has part: feature:2530663-2530848:-1:exon
so has part: feature:2524703-2524857:-1:exon
so has part: feature:2522970-2523060:-1:exon
so has part: feature:2520167-2520234:-1:exon
so has part: feature:2514158-2514263:-1:exon
so has part: feature:2512662-2512778:-1:exon
so has part: feature:2509210-2509341:-1:exon
so has part: feature:2506783-2506911:-1:exon
so has part: feature:2505975-2506044:-1:exon
so has part: feature:2503909-2503973:-1:exon
so has part: feature:2501469-2501553:-1:exon
so has part: feature:2494684-2494758:-1:exon
so has part: feature:2485312-2485480:-1:exon
so has part: feature:2478778-2478868:-1:exon
so has part: feature:2473421-2473546:-1:exon
so has part: feature:2466082-2466096:-1:exon

XP_010973791.2
type: Protein
SIO_000068: ncbiprotein

position:2466082:-1
position: 2466082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2579479:-1
position: 2579479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2579412-2579479:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2576020-2576208:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2571180-2571323:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2564036-2564165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2547461-2547547:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2545449-2545544:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2542806-2542877:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2539694-2539798:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2538955-2539047:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2530663-2530848:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2524703-2524857:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2522970-2523060:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2520167-2520234:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2514158-2514263:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2512662-2512778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2509210-2509341:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2506783-2506911:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2505975-2506044:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2503909-2503973:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2501469-2501553:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2494684-2494758:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2485312-2485480:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2478778-2478868:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2473421-2473546:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2466082-2466096:-1:exon

LOC116148825
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148825
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3003592..3026362
location: region:3003592-3026362:1
so has part: feature:3003592-3026362:1:exon
subclass of: SO_0000011

116148825
type: Gene
SIO_000068: ncbigene

position:3003592:1
position: 3003592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3026362:1
position: 3026362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3003592-3026362:1:exon

LOC116148825
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148825
product: uncharacterized LOC116148825
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132424.1
SIO_010081: LOC116148825
subclass of: SO_0000673
so part of: LOC116148825
location: join(3003592..3003602,3004619..3004623,3026241..3026362)
location: region:3003592-3026362:1
so has part: feature:3003592-3003602:1:exon
so has part: feature:3004619-3004623:1:exon
so has part: feature:3026241-3026362:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3003592-3003602:1:exon

position:3003602:1
position: 3003602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3004619-3004623:1:exon

position:3004619:1
position: 3004619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3004623:1
position: 3004623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3026241-3026362:1:exon

position:3026241:1
position: 3026241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 3368783..3368852
location: region:3368783-3368852:1
so has part: feature:3368783-3368852:1:exon
subclass of: SO_0000663

116148849
type: Gene
SIO_000068: ncbigene

position:3368783:1
position: 3368783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3368852:1
position: 3368852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368783-3368852:1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:3368813..3368815,aa:Pro,seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: 3368783..3368852
location: region:3368783-3368852:1
so has part: feature:3368783-3368852:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3368783-3368852:1:exon

LOC116148826
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148826
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4378395..4379925
location: region:4378395-4379925:1
so has part: feature:4378395-4379925:1:exon
subclass of: SO_0000011

116148826
type: Gene
SIO_000068: ncbigene

position:4378395:1
position: 4378395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4379925:1
position: 4379925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4378395-4379925:1:exon

LOC116148826
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148826
product: uncharacterized LOC116148826
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132425.1
SIO_010081: LOC116148826
subclass of: SO_0000673
so part of: LOC116148826
location: join(4378395..4378591,4379733..4379925)
location: region:4378395-4379925:1
so has part: feature:4378395-4378591:1:exon
so has part: feature:4379733-4379925:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4378395-4378591:1:exon

position:4378591:1
position: 4378591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4379733-4379925:1:exon

position:4379733:1
position: 4379733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148780
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148780
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4406090..4421573)
location: region:4406090-4421573:-1
so has part: feature:4406090-4421573:-1:exon
subclass of: SO_0000011

116148780
type: Gene
SIO_000068: ncbigene

position:4406090:-1
position: 4406090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4421573:-1
position: 4421573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4406090-4421573:-1:exon

LOC116148780
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148780
product: uncharacterized LOC116148780
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004132321.1
SIO_010081: LOC116148780
subclass of: SO_0000673
so part of: LOC116148780
location: complement(join(4406090..4407647,4407757..4408074,4421538..4421573))
location: region:4406090-4421573:-1
so has part: feature:4421538-4421573:-1:exon
so has part: feature:4407757-4408074:-1:exon
so has part: feature:4406090-4407647:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4421538-4421573:-1:exon

position:4421538:-1
position: 4421538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4407757-4408074:-1:exon

position:4407757:-1
position: 4407757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4408074:-1
position: 4408074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4406090-4407647:-1:exon

position:4407647:-1
position: 4407647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105104728
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105104728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4619183..4620398)
location: region:4619183-4620398:-1
so has part: feature:4619183-4620398:-1:exon

105104728
type: Gene
SIO_000068: ncbigene

position:4619183:-1
position: 4619183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4620398:-1
position: 4620398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4619183-4620398:-1:exon

LOC105104728
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105104728
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105104728
subclass of: SO_0000673
so part of: LOC105104728
location: complement(4619183..4619763)
location: region:4619183-4619763:-1
so has part: feature:4619183-4619763:-1:exon

position:4619763:-1
position: 4619763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4619183-4619763:-1:exon

LOC105104728
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105104728
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105104728
subclass of: SO_0000673
so part of: LOC105104728
location: complement(4620393..4620398)
location: region:4620393-4620398:-1
so has part: feature:4620393-4620398:-1:exon

position:4620393:-1
position: 4620393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4620393-4620398:-1:exon

LOC105104729
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105104729
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4867768..4868427
location: region:4867768-4868427:1
so has part: feature:4867768-4868427:1:exon

105104729
type: Gene
SIO_000068: ncbigene

position:4867768:1
position: 4867768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4868427:1
position: 4868427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4867768-4868427:1:exon

LOC105104729
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105104729
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105104729
subclass of: SO_0000673
so part of: LOC105104729
location: 4867768..4868427
location: region:4867768-4868427:1
so has part: feature:4867768-4868427:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4867768-4868427:1:exon

LOC116148827
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148827
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5204372..5222444)
location: region:5204372-5222444:-1
so has part: feature:5204372-5222444:-1:exon
subclass of: SO_0000011

116148827
type: Gene
SIO_000068: ncbigene

position:5204372:-1
position: 5204372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5222444:-1
position: 5222444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5204372-5222444:-1:exon

LOC116148827
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148827
product: uncharacterized LOC116148827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004132426.1
SIO_010081: LOC116148827
subclass of: SO_0000673
so part of: LOC116148827
location: complement(join(5204372..5204504,5220538..5220541,5222430..5222444))
location: region:5204372-5222444:-1
so has part: feature:5222430-5222444:-1:exon
so has part: feature:5220538-5220541:-1:exon
so has part: feature:5204372-5204504:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5222430-5222444:-1:exon

position:5222430:-1
position: 5222430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5220538-5220541:-1:exon

position:5220538:-1
position: 5220538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5220541:-1
position: 5220541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5204372-5204504:-1:exon

position:5204504:-1
position: 5204504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148828
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148828
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5282931..5298920)
location: region:5282931-5298920:-1
so has part: feature:5282931-5298920:-1:exon
subclass of: SO_0000011

116148828
type: Gene
SIO_000068: ncbigene

position:5282931:-1
position: 5282931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5298920:-1
position: 5298920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5282931-5298920:-1:exon

LOC116148828
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148828
product: uncharacterized LOC116148828
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132427.1
SIO_010081: LOC116148828
subclass of: SO_0000673
so part of: LOC116148828
location: complement(join(5282931..5282942,5293639..5293643,5298779..5298920))
location: region:5282931-5298920:-1
so has part: feature:5298779-5298920:-1:exon
so has part: feature:5293639-5293643:-1:exon
so has part: feature:5282931-5282942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5298779-5298920:-1:exon

position:5298779:-1
position: 5298779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5293639-5293643:-1:exon

position:5293639:-1
position: 5293639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5293643:-1
position: 5293643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5282931-5282942:-1:exon

position:5282942:-1
position: 5282942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5313000..5313071)
location: region:5313000-5313071:-1
so has part: feature:5313000-5313071:-1:exon
subclass of: SO_0000663

116148857
type: Gene
SIO_000068: ncbigene

position:5313000:-1
position: 5313000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5313071:-1
position: 5313071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5313000-5313071:-1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5313037..5313039),aa:Pro, seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: complement(5313000..5313071)
location: region:5313000-5313071:-1
so has part: feature:5313000-5313071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5313000-5313071:-1:exon

TRNAS-AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAS-AGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(5826889..5826960)
location: region:5826889-5826960:-1
so has part: feature:5826889-5826960:-1:exon
subclass of: SO_0000663

116148858
type: Gene
SIO_000068: ncbigene

position:5826889:-1
position: 5826889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5826960:-1
position: 5826960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5826889-5826960:-1:exon

TRNAS-AGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAS-AGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(5826926..5826928),aa:Ser, seq:aga)
SIO_010081: TRNAS-AGA
subclass of: SO_0000673
so part of: TRNAS-AGA
location: complement(5826889..5826960)
location: region:5826889-5826960:-1
so has part: feature:5826889-5826960:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5826889-5826960:-1:exon

CELF4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6177970..6419825
location: region:6177970-6419825:1
so has part: feature:6177970-6419825:1:exon
subclass of: SO_0000010

105086946
type: Gene
SIO_000068: ncbigene

position:6177970:1
position: 6177970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6419825:1
position: 6419825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177970-6419825:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438930.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177970..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177970-6419611:1
so has part: feature:6177970-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

position:6419611:1
position: 6419611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177970-6178086:1:exon

position:6178086:1
position: 6178086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353848:1:exon

position:6353770:1
position: 6353770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6353848:1
position: 6353848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6393253-6393381:1:exon

position:6393253:1
position: 6393253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6393381:1
position: 6393381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

position:6393776:1
position: 6393776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6393855:1
position: 6393855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

position:6394130:1
position: 6394130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6394273:1
position: 6394273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

position:6395140:1
position: 6395140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6395287:1
position: 6395287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

position:6397067:1
position: 6397067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6397216:1
position: 6397216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

position:6400729:1
position: 6400729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6400794:1
position: 6400794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6402396-6402479:1:exon

position:6402396:1
position: 6402396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6402479:1
position: 6402479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407541:1:exon

position:6407398:1
position: 6407398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6407541:1
position: 6407541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

position:6412495:1
position: 6412495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6412666:1
position: 6412666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

position:6419589:1
position: 6419589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438931.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177970..6178086,6353770..6353818,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402399..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177970-6419611:1
so has part: feature:6177970-6178086:1:exon
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400791:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177970-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353818:1:exon

position:6353818:1
position: 6353818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400791:1:exon

position:6400791:1
position: 6400791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6402399-6402479:1:exon

position:6402399:1
position: 6402399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438933.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177970..6178086,6353770..6353818,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402399..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177970-6419611:1
so has part: feature:6177970-6178086:1:exon
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400791:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177970-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393256-6393381:1:exon

position:6393256:1
position: 6393256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400791:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031438928.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177981..6178086,6353770..6353818,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6412495..6412666,6419589..6419825)
location: region:6177981-6419825:1
so has part: feature:6177981-6178086:1:exon
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419825:1:exon

position:6177981:1
position: 6177981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177981-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6419589-6419825:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031438925.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407481,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
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so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407481:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

position:6177995:1
position: 6177995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177995-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 10
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position:6407481:1
position: 6407481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031438926.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 3
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438918.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402399..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
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so has part: feature:6394130-6394273:1:exon
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so has part: feature:6400729-6400794:1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438929.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 5
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SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438919.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402396..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
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so has part: feature:6394130-6394273:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031438927.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402396..6402479,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 5
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CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438922.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402399..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438917.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395143..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
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urn:…
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urn:…
SIO_000300: 6
SIO_000628: feature:6395143-6395287:1:exon

position:6395143:1
position: 6395143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
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urn:…
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urn:…
SIO_000300: 12
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CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438916.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
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urn:…
SIO_000300: 1
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SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031438934.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407481,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407481:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177995-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407481:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438920.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402399..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177995-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031438935.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402399..6402479,6407398..6407481,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407481:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177995-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407481:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438923.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353818,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177995-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438924.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353818,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412666,6419589..6419611)
location: region:6177995-6419611:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6419589-6419611:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6177995-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6419589-6419611:1:exon

CELF4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CELF4
product: CUGBP Elav-like family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438915.1
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6177995..6178086,6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412666,6417688..6417852)
location: region:6177995-6417852:1
so has part: feature:6177995-6178086:1:exon
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412666:1:exon
so has part: feature:6417688-6417852:1:exon

position:6417852:1
position: 6417852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6177995-6178086:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6412495-6412666:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6417688-6417852:1:exon

position:6417688:1
position: 6417688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X1
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294775.1
type: Protein
SIO_000068: ncbiprotein

position:6412622:1
position: 6412622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X1
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294790.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X10
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407481,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407481:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294785.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X11
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294786.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X4
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402399..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294778.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X14
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGRFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294789.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X5
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAAAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402396..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400791:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294779.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X12
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAAAAYPAAYGQISQAFPQPPPMIPQQQREGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402396..6402479,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400791:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294787.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X7
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402399..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400791:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294782.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X3
translation: MNRPIQVKPADSESRGGSSCLRQPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQAMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393253..6393381,6393776..6393855,6394130..6394273,6395143..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395143-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294777.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395143-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X2
translation: MNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294776.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X17
translation: MNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407481,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407481:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294794.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X6
translation: MNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402399..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294780.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X18
translation: MNRPIQVKPADSESRGGSSCLRQPPSHRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353848,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402399..6402479,6407398..6407481,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353848:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407481:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294795.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353848:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407481:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X8
translation: MNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353818,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294783.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X15
translation: MNRPIQVKPADSESRGEDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353818,6393253..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402399..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393253-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400791:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294791.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393253-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X9
translation: MNRPIQVKPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353818,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294784.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X13
translation: MNRPIQVKPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAGPAAYPAAYGQISQAFPQPPPMIPQQQREGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353818,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400794,6402396..6402479,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400794:1:exon
so has part: feature:6402396-6402479:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294788.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400794:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402396-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6412495-6412622:1:exon

CELF4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CELF4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUGBP Elav-like family member 4 isoform X16
translation: MNRPIQVKPADSESRGDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGPDGNSKGCAFVKYSSHAEAQAAINALHGSQTMPGASSSLVVKFADTDKERTMRRMQQMAGQMGMFNPMAIPFGAYGAYAQALMQQQAALMASVAQGGYLNPMAAFAAAQMQQMAALNMNGLAAAPMTPTSGGSTPPGITAPAVPSIPSPIGVNGFTGLPPQANGQPAAEAVFANGIHPYPAQSPTAADPLQQAYAGVQQYAAAYPAAYGQISQAFPQPPPMIPQQQREGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISSKVFVDRATNQSKCFGFVSFDNPASAQTAIQAMNGFQIGMKRLKVQLKRPKDANRPY
SIO_010081: CELF4
subclass of: SO_0000673
so part of: CELF4
location: join(6353770..6353818,6393256..6393381,6393776..6393855,6394130..6394273,6395140..6395287,6397067..6397216,6400729..6400791,6402399..6402479,6407398..6407541,6412495..6412622)
location: region:6353770-6412622:1
so has part: feature:6353770-6353818:1:exon
so has part: feature:6393256-6393381:1:exon
so has part: feature:6393776-6393855:1:exon
so has part: feature:6394130-6394273:1:exon
so has part: feature:6395140-6395287:1:exon
so has part: feature:6397067-6397216:1:exon
so has part: feature:6400729-6400791:1:exon
so has part: feature:6402399-6402479:1:exon
so has part: feature:6407398-6407541:1:exon
so has part: feature:6412495-6412622:1:exon

XP_031294793.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6353770-6353818:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6393256-6393381:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6393776-6393855:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394130-6394273:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6395140-6395287:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6397067-6397216:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6400729-6400791:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6402399-6402479:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6407398-6407541:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6412495-6412622:1:exon

KIAA1328
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: KIAA1328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6434809..6603333)
location: region:6434809-6603333:-1
so has part: feature:6434809-6603333:-1:exon
subclass of: SO_0000010

105086941
type: Gene
SIO_000068: ncbigene

position:6434809:-1
position: 6434809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6603333:-1
position: 6603333
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6434809-6603333:-1:exon

KIAA1328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KIAA1328
product: KIAA1328 ortholog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031438937.1
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(6434809..6441818,6470499..6470607,6481125..6481306,6506069..6506176,6508074..6508747,6530196..6530323,6578121..6578236,6589340..6589434,6596587..6596729,6597433..6597468,6603221..6603333))
location: region:6434809-6603333:-1
so has part: feature:6603221-6603333:-1:exon
so has part: feature:6597433-6597468:-1:exon
so has part: feature:6596587-6596729:-1:exon
so has part: feature:6589340-6589434:-1:exon
so has part: feature:6578121-6578236:-1:exon
so has part: feature:6530196-6530323:-1:exon
so has part: feature:6508074-6508747:-1:exon
so has part: feature:6506069-6506176:-1:exon
so has part: feature:6481125-6481306:-1:exon
so has part: feature:6470499-6470607:-1:exon
so has part: feature:6434809-6441818:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603221-6603333:-1:exon

position:6603221:-1
position: 6603221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6597433-6597468:-1:exon

position:6597433:-1
position: 6597433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6597468:-1
position: 6597468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6596587-6596729:-1:exon

position:6596587:-1
position: 6596587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6596729:-1
position: 6596729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6589340-6589434:-1:exon

position:6589340:-1
position: 6589340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6589434:-1
position: 6589434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6578121-6578236:-1:exon

position:6578121:-1
position: 6578121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6578236:-1
position: 6578236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6530196-6530323:-1:exon

position:6530196:-1
position: 6530196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6530323:-1
position: 6530323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6508074-6508747:-1:exon

position:6508074:-1
position: 6508074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6508747:-1
position: 6508747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6506069-6506176:-1:exon

position:6506069:-1
position: 6506069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6506176:-1
position: 6506176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6481125-6481306:-1:exon

position:6481125:-1
position: 6481125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6481306:-1
position: 6481306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6470499-6470607:-1:exon

position:6470499:-1
position: 6470499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6470607:-1
position: 6470607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6434809-6441818:-1:exon

position:6441818:-1
position: 6441818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIAA1328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KIAA1328
product: KIAA1328 ortholog, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_031438939.1
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(6434809..6441818,6470499..6470607,6481125..6481306,6506069..6506176,6508074..6508747,6530196..6530323,6578121..6578236,6589340..6589434,6596587..6596729,6602973..6603189))
location: region:6434809-6603189:-1
so has part: feature:6602973-6603189:-1:exon
so has part: feature:6596587-6596729:-1:exon
so has part: feature:6589340-6589434:-1:exon
so has part: feature:6578121-6578236:-1:exon
so has part: feature:6530196-6530323:-1:exon
so has part: feature:6508074-6508747:-1:exon
so has part: feature:6506069-6506176:-1:exon
so has part: feature:6481125-6481306:-1:exon
so has part: feature:6470499-6470607:-1:exon
so has part: feature:6434809-6441818:-1:exon

position:6603189:-1
position: 6603189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6602973-6603189:-1:exon

position:6602973:-1
position: 6602973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6596587-6596729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6589340-6589434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6578121-6578236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6530196-6530323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6508074-6508747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6506069-6506176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6481125-6481306:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6470499-6470607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6434809-6441818:-1:exon

KIAA1328
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KIAA1328
product: KIAA1328 ortholog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_031438938.1
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(6434809..6441818,6470499..6470607,6481125..6481306,6506069..6506176,6508074..6508747,6530196..6530323,6578121..6578236,6589340..6589434,6596587..6596729,6601714..6601799))
location: region:6434809-6601799:-1
so has part: feature:6601714-6601799:-1:exon
so has part: feature:6596587-6596729:-1:exon
so has part: feature:6589340-6589434:-1:exon
so has part: feature:6578121-6578236:-1:exon
so has part: feature:6530196-6530323:-1:exon
so has part: feature:6508074-6508747:-1:exon
so has part: feature:6506069-6506176:-1:exon
so has part: feature:6481125-6481306:-1:exon
so has part: feature:6470499-6470607:-1:exon
so has part: feature:6434809-6441818:-1:exon

position:6601799:-1
position: 6601799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6601714-6601799:-1:exon

position:6601714:-1
position: 6601714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6596587-6596729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6589340-6589434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6578121-6578236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6530196-6530323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6508074-6508747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6506069-6506176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6481125-6481306:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6470499-6470607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6434809-6441818:-1:exon

KIAA1328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KIAA1328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein hinderin isoform X1
translation: MADVAGPSRPGAAAFWSRDFSDEEQSVVYVPGISAEGNIRSRQKMVNPKADVKLKTPRVTAASVSTESLRGAGDSVDGQNFCRRGMKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFERKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAAKMQEQQVSNRKGALRSSSMELDGSYLSVAKPQTYYQTKQRPKSANQDLSSESLAEFRNNSLKPAALHYPKKDVGKVPSETTTCSYGSPGRKLVDAVPTEKTAPEELRTKECQHLKAALSSQCCGHRLADNADHIQESHPTNVAPQHSKTHLESCSCCGLSWASLLRGHGALQPSETDIKKQLSEDRRQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLRTQAVFNSREPVAHKEISKPQELNLDMNESDTGPSLLKSKCDDCLLGTSSSVKKYQGSTNSGESRREKKTVEFQSHVEDDALWTCQKKDAFQPQRGTMAGVRRDASTSPMTTGSQKELVTPTTSSAQHGTSRYETSLLDLVQSLSPKTALKPRSHPSREAGSWNHSTCRCSPLKSTWNKPRAGRTPEDLEENQILEDIFFI
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(6441608..6441818,6470499..6470607,6481125..6481306,6506069..6506176,6508074..6508747,6530196..6530323,6578121..6578236,6589340..6589434,6596587..6596729,6597433..6597468,6603221..6603278))
location: region:6441608-6603278:-1
so has part: feature:6603221-6603278:-1:exon
so has part: feature:6597433-6597468:-1:exon
so has part: feature:6596587-6596729:-1:exon
so has part: feature:6589340-6589434:-1:exon
so has part: feature:6578121-6578236:-1:exon
so has part: feature:6530196-6530323:-1:exon
so has part: feature:6508074-6508747:-1:exon
so has part: feature:6506069-6506176:-1:exon
so has part: feature:6481125-6481306:-1:exon
so has part: feature:6470499-6470607:-1:exon
so has part: feature:6441608-6441818:-1:exon

XP_031294797.1
type: Protein
SIO_000068: ncbiprotein

position:6441608:-1
position: 6441608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6603278:-1
position: 6603278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603221-6603278:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6597433-6597468:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6596587-6596729:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6589340-6589434:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6578121-6578236:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6530196-6530323:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6508074-6508747:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6506069-6506176:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6481125-6481306:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6470499-6470607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6441608-6441818:-1:exon

KIAA1328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KIAA1328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein hinderin isoform X2
translation: MCVECRVERLIKLVGISAEGNIRSRQKMVNPKADVKLKTPRVTAASVSTESLRGAGDSVDGQNFCRRGMKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFERKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAAKMQEQQVSNRKGALRSSSMELDGSYLSVAKPQTYYQTKQRPKSANQDLSSESLAEFRNNSLKPAALHYPKKDVGKVPSETTTCSYGSPGRKLVDAVPTEKTAPEELRTKECQHLKAALSSQCCGHRLADNADHIQESHPTNVAPQHSKTHLESCSCCGLSWASLLRGHGALQPSETDIKKQLSEDRRQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLRTQAVFNSREPVAHKEISKPQELNLDMNESDTGPSLLKSKCDDCLLGTSSSVKKYQGSTNSGESRREKKTVEFQSHVEDDALWTCQKKDAFQPQRGTMAGVRRDASTSPMTTGSQKELVTPTTSSAQHGTSRYETSLLDLVQSLSPKTALKPRSHPSREAGSWNHSTCRCSPLKSTWNKPRAGRTPEDLEENQILEDIFFI
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(6441608..6441818,6470499..6470607,6481125..6481306,6506069..6506176,6508074..6508747,6530196..6530323,6578121..6578236,6589340..6589434,6596587..6596729,6601714..6601756))
location: region:6441608-6601756:-1
so has part: feature:6601714-6601756:-1:exon
so has part: feature:6596587-6596729:-1:exon
so has part: feature:6589340-6589434:-1:exon
so has part: feature:6578121-6578236:-1:exon
so has part: feature:6530196-6530323:-1:exon
so has part: feature:6508074-6508747:-1:exon
so has part: feature:6506069-6506176:-1:exon
so has part: feature:6481125-6481306:-1:exon
so has part: feature:6470499-6470607:-1:exon
so has part: feature:6441608-6441818:-1:exon

XP_031294798.1
type: Protein
SIO_000068: ncbiprotein

position:6601756:-1
position: 6601756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6601714-6601756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6596587-6596729:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6589340-6589434:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6578121-6578236:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6530196-6530323:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6508074-6508747:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6506069-6506176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6481125-6481306:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6470499-6470607:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6441608-6441818:-1:exon

KIAA1328
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: KIAA1328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein hinderin isoform X3
translation: MVNPKADVKLKTPRVTAASVSTESLRGAGDSVDGQNFCRRGMKSASLKDLCLEDKRRIANLIKELARVSEEKEVTEERLKAEQESFERKIRQLEEQNELIIKEREALQLQYRECQELLSLYQKYLSEQQEKLTMSLSELGAAKMQEQQVSNRKGALRSSSMELDGSYLSVAKPQTYYQTKQRPKSANQDLSSESLAEFRNNSLKPAALHYPKKDVGKVPSETTTCSYGSPGRKLVDAVPTEKTAPEELRTKECQHLKAALSSQCCGHRLADNADHIQESHPTNVAPQHSKTHLESCSCCGLSWASLLRGHGALQPSETDIKKQLSEDRRQQLMLQKMELEIEKERLQHLLAQQETKLLLKQQQLHQSRLDYNWLRTQAVFNSREPVAHKEISKPQELNLDMNESDTGPSLLKSKCDDCLLGTSSSVKKYQGSTNSGESRREKKTVEFQSHVEDDALWTCQKKDAFQPQRGTMAGVRRDASTSPMTTGSQKELVTPTTSSAQHGTSRYETSLLDLVQSLSPKTALKPRSHPSREAGSWNHSTCRCSPLKSTWNKPRAGRTPEDLEENQILEDIFFI
SIO_010081: KIAA1328
subclass of: SO_0000673
so part of: KIAA1328
location: complement(join(6441608..6441818,6470499..6470607,6481125..6481306,6506069..6506176,6508074..6508747,6530196..6530323,6578121..6578236,6589340..6589434,6596587..6596691))
location: region:6441608-6596691:-1
so has part: feature:6596587-6596691:-1:exon
so has part: feature:6589340-6589434:-1:exon
so has part: feature:6578121-6578236:-1:exon
so has part: feature:6530196-6530323:-1:exon
so has part: feature:6508074-6508747:-1:exon
so has part: feature:6506069-6506176:-1:exon
so has part: feature:6481125-6481306:-1:exon
so has part: feature:6470499-6470607:-1:exon
so has part: feature:6441608-6441818:-1:exon

XP_031294799.1
type: Protein
SIO_000068: ncbiprotein

position:6596691:-1
position: 6596691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6596587-6596691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6589340-6589434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6578121-6578236:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6530196-6530323:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6508074-6508747:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6506069-6506176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6481125-6481306:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6470499-6470607:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6441608-6441818:-1:exon

TPGS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6603390..6633346
location: region:6603390-6633346:1
so has part: feature:6603390-6633346:1:exon
subclass of: SO_0000010

105086921
type: Gene
SIO_000068: ncbigene

position:6603390:1
position: 6603390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6633346:1
position: 6633346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603390-6633346:1:exon

TPGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TPGS2
product: tubulin polyglutamylase complex subunit 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010977505.2
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603390..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6626211..6628232)
location: region:6603390-6628232:1
so has part: feature:6603390-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6626211-6628232:1:exon

position:6628232:1
position: 6628232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603390-6603765:1:exon

position:6603765:1
position: 6603765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

position:6608947:1
position: 6608947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6609026:1
position: 6609026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

position:6618450:1
position: 6618450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6618537:1
position: 6618537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

position:6620010:1
position: 6620010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6620138:1
position: 6620138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

position:6623107:1
position: 6623107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6623220:1
position: 6623220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

position:6624831:1
position: 6624831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6624991:1
position: 6624991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6626211-6628232:1:exon

position:6626211:1
position: 6626211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TPGS2
product: tubulin polyglutamylase complex subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_031438942.1
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603423..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6632269..6633346)
location: region:6603423-6633346:1
so has part: feature:6603423-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6632269-6633346:1:exon

position:6603423:1
position: 6603423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603423-6603765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6632269-6633346:1:exon

position:6632269:1
position: 6632269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TPGS2
product: tubulin polyglutamylase complex subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_031438940.1
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603423..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6626214..6628232)
location: region:6603423-6628232:1
so has part: feature:6603423-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6626214-6628232:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6603423-6603765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6626214-6628232:1:exon

position:6626214:1
position: 6626214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPGS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: TPGS2
product: tubulin polyglutamylase complex subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_031438943.1
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603423..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6626124..6626236)
location: region:6603423-6626236:1
so has part: feature:6603423-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6626124-6626236:1:exon

position:6626236:1
position: 6626236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603423-6603765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6626124-6626236:1:exon

position:6626124:1
position: 6626124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 2 isoform X2
translation: MEETPPPLLGSSKPHLEKLTLGVTRILESSPGVTEVTIIEKAPAERHMISSWEQKNNCVLPEDLKNFYLMTNGFHMTWSVKLDEHTIPLGSMAINSISKLTQLNQSAMYSLPNAPTLADLEDETQEASEGRPEKPHFDSRSVIFELDPCGGNGKVCLVYKKGKPASAQDAEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTGYGISPQAKHEDWQRIPWTATRDTNHPQNRSAPTLGESLSLNQKLQSEGQTIKDKIKPLEKQLTFTKDPVPSFIPLNYF
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603684..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6632269..6632481)
location: region:6603684-6632481:1
so has part: feature:6603684-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6632269-6632481:1:exon

XP_031294802.1
type: Protein
SIO_000068: ncbiprotein

position:6603684:1
position: 6603684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6632481:1
position: 6632481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603684-6603765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6632269-6632481:1:exon

TPGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 2 isoform X4
translation: MEETPPPLLGSSKPHLEKLTLGVTRILESSPGVTEVTIIEKAPAERHMISSWEQKNNCVLPEDLKNFYLMTNGFHMTWSVKLDEHTIPLGSMAINSISKLTQLNQSAMYSLPNAPTLADLEDETQEASEGRPEKPHFDSRSVIFELDPCGGNGKVCLVYKKGKPASAQDAEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTGYGISPQAKQWFNMYKPITYNTDLLTEETDSFVNKLDPSKVFKSKSKTLIPKKKGPVQPAGGQKGSSGSPCSSKPSSGSGNPVRK
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603684..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6626211..6626441)
location: region:6603684-6626441:1
so has part: feature:6603684-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6626211-6626441:1:exon

XP_010975807.1
type: Protein
SIO_000068: ncbiprotein

position:6626441:1
position: 6626441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603684-6603765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6626211-6626441:1:exon

TPGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 2 isoform X1
translation: MEETPPPLLGSSKPHLEKLTLGVTRILESSPGVTEVTIIEKAPAERHMISSWEQKNNCVLPEDLKNFYLMTNGFHMTWSVKLDEHTIPLGSMAINSISKLTQLNQSAMYSLPNAPTLADLEDETQEASEGRPEKPHFDSRSVIFELDPCGGNGKVCLVYKKGKPASAQDAEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTGYGISPQAKWFNMYKPITYNTDLLTEETDSFVNKLDPSKVFKSKSKTLIPKKKGPVQPAGGQKGSSGSPCSSKPSSGSGNPVRK
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603684..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6626214..6626441)
location: region:6603684-6626441:1
so has part: feature:6603684-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6626214-6626441:1:exon

XP_031294800.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6603684-6603765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6626214-6626441:1:exon

TPGS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: TPGS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polyglutamylase complex subunit 2 isoform X3
translation: MEETPPPLLGSSKPHLEKLTLGVTRILESSPGVTEVTIIEKAPAERHMISSWEQKNNCVLPEDLKNFYLMTNGFHMTWSVKLDEHTIPLGSMAINSISKLTQLNQSAMYSLPNAPTLADLEDETQEASEGRPEKPHFDSRSVIFELDPCGGNGKVCLVYKKGKPASAQDAEIWFLDRALYWHFLTDTFTAYYRLLITHLGLPQWQYAFTGYGISPQAKLSTLYL
SIO_010081: TPGS2
subclass of: SO_0000673
so part of: TPGS2
location: join(6603684..6603765,6608947..6609026,6618450..6618537,6620010..6620138,6623107..6623220,6624831..6624991,6626124..6626144)
location: region:6603684-6626144:1
so has part: feature:6603684-6603765:1:exon
so has part: feature:6608947-6609026:1:exon
so has part: feature:6618450-6618537:1:exon
so has part: feature:6620010-6620138:1:exon
so has part: feature:6623107-6623220:1:exon
so has part: feature:6624831-6624991:1:exon
so has part: feature:6626124-6626144:1:exon

XP_031294803.1
type: Protein
SIO_000068: ncbiprotein

position:6626144:1
position: 6626144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6603684-6603765:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6608947-6609026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6618450-6618537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620010-6620138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6623107-6623220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6624831-6624991:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6626124-6626144:1:exon

FHOD3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: FHOD3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6637856..7049521)
location: region:6637856-7049521:-1
so has part: feature:6637856-7049521:-1:exon
subclass of: SO_0000010

105086910
type: Gene
SIO_000068: ncbigene

position:6637856:-1
position: 6637856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7049521:-1
position: 7049521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6637856-7049521:-1:exon

FHOD3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: FHOD3
product: formin homology 2 domain containing 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031438936.1
SIO_010081: FHOD3
subclass of: SO_0000673
so part of: FHOD3
location: complement(join(6637856..6638479,6648539..6648700,6653708..6653882,6655403..6655426,6658969..6659161,6665322..6665512,6670907..6671068,6671814..6671933,6673533..6673715,6685869..6686027,6698553..6699428,6705574..6705852,6718528..6718742,6724435..6724485,6728765..6728899,6747134..6747247,6752301..6752375,6752787..6753145,6755872..6755964,6776319..6776572,6783202..6783345,6789135..6789229,6796930..6797041,6813921..6814015,6869495..6869600,6876077..6876144,6983095..6983159,6992232..6992338,7049222..7049521))
location: region:6637856-7049521:-1
so has part: feature:7049222-7049521:-1:exon
so has part: feature:6992232-6992338:-1:exon
so has part: feature:6983095-6983159:-1:exon
so has part: feature:6876077-6876144:-1:exon
so has part: feature:6869495-6869600:-1:exon
so has part: feature:6813921-6814015:-1:exon
so has part: feature:6796930-6797041:-1:exon
so has part: feature:6789135-6789229:-1:exon
so has part: feature:6783202-6783345:-1:exon
so has part: feature:6776319-6776572:-1:exon
so has part: feature:6755872-6755964:-1:exon
so has part: feature:6752787-6753145:-1:exon
so has part: feature:6752301-6752375:-1:exon
so has part: feature:6747134-6747247:-1:exon
so has part: feature:6728765-6728899:-1:exon
so has part: feature:6724435-6724485:-1:exon
so has part: feature:6718528-6718742:-1:exon
so has part: feature:6705574-6705852:-1:exon
so has part: feature:6698553-6699428:-1:exon
so has part: feature:6685869-6686027:-1:exon
so has part: feature:6673533-6673715:-1:exon
so has part: feature:6671814-6671933:-1:exon
so has part: feature:6670907-6671068:-1:exon
so has part: feature:6665322-6665512:-1:exon
so has part: feature:6658969-6659161:-1:exon
so has part: feature:6655403-6655426:-1:exon
so has part: feature:6653708-6653882:-1:exon
so has part: feature:6648539-6648700:-1:exon
so has part: feature:6637856-6638479:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7049222-7049521:-1:exon

position:7049222:-1
position: 7049222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6992232-6992338:-1:exon

position:6992232:-1
position: 6992232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6992338:-1
position: 6992338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6983095-6983159:-1:exon

position:6983095:-1
position: 6983095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6983159:-1
position: 6983159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6876077-6876144:-1:exon

position:6876077:-1
position: 6876077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6876144:-1
position: 6876144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6869495-6869600:-1:exon

position:6869495:-1
position: 6869495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6869600:-1
position: 6869600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6813921-6814015:-1:exon

position:6813921:-1
position: 6813921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6814015:-1
position: 6814015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6796930-6797041:-1:exon

position:6796930:-1
position: 6796930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6797041:-1
position: 6797041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6789135-6789229:-1:exon

position:6789135:-1
position: 6789135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6789229:-1
position: 6789229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6783202-6783345:-1:exon

position:6783202:-1
position: 6783202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6783345:-1
position: 6783345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6776319-6776572:-1:exon

position:6776319:-1
position: 6776319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6776572:-1
position: 6776572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6755872-6755964:-1:exon

position:6755872:-1
position: 6755872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6755964:-1
position: 6755964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6752787-6753145:-1:exon

position:6752787:-1
position: 6752787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6753145:-1
position: 6753145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6752301-6752375:-1:exon

position:6752301:-1
position: 6752301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6752375:-1
position: 6752375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6747134-6747247:-1:exon

position:6747134:-1
position: 6747134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6747247:-1
position: 6747247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6728765-6728899:-1:exon

position:6728765:-1
position: 6728765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6728899:-1
position: 6728899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:6724435-6724485:-1:exon

position:6724435:-1
position: 6724435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6724485:-1
position: 6724485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:6718528-6718742:-1:exon

position:6718528:-1
position: 6718528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6718742:-1
position: 6718742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:6705574-6705852:-1:exon

position:6705574:-1
position: 6705574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6705852:-1
position: 6705852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:6698553-6699428:-1:exon

position:6698553:-1
position: 6698553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6699428:-1
position: 6699428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:6685869-6686027:-1:exon

position:6685869:-1
position: 6685869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6686027:-1
position: 6686027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:6673533-6673715:-1:exon

position:6673533:-1
position: 6673533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6673715:-1
position: 6673715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:6671814-6671933:-1:exon

position:6671814:-1
position: 6671814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6671933:-1
position: 6671933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:6670907-6671068:-1:exon

position:6670907:-1
position: 6670907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6671068:-1
position: 6671068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:6665322-6665512:-1:exon

position:6665322:-1
position: 6665322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6665512:-1
position: 6665512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:6658969-6659161:-1:exon

position:6658969:-1
position: 6658969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6659161:-1
position: 6659161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:6655403-6655426:-1:exon

position:6655403:-1
position: 6655403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6655426:-1
position: 6655426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:6653708-6653882:-1:exon

position:6653708:-1
position: 6653708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6653882:-1
position: 6653882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:6648539-6648700:-1:exon

position:6648539:-1
position: 6648539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6648700:-1
position: 6648700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:6637856-6638479:-1:exon

position:6638479:-1
position: 6638479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FHOD3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: FHOD3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: FH1/FH2 domain-containing protein 3
translation: MATLACRVQFLDDTDPFNSTNFPEPSRPPLFTFREDLALGTQLAGVHRLLRAPHKLDDCTLQLSHNGTYLDLEATLAEQRDELEGFQDDAGRGKKHSIILRTQLSVRVHACIEKLYNSSGRDLRRALFSLKQIFQDDKDLVHEFVVAEGLTCLIKVGAEADQNYQNYILRALGQIMLYVDGMNGVINHNETIQWLYTLIGSKFRLVVKTALKLLLVFVEYSESNAPLLIQAVSAVDTKRGVKPWSNIMEILEEKDGVDTELLVYAMTLVNKTLSGLPDQDTFYDVVDCLEELGIAAVSQRHLSKKGTDLDLVEQLNIYEVALRHEDEDSDETAEPPPSGRRDRRRASVCSGGGGSGGEHRGLDRRRSRRHSVQSIRSPLSAPSSPCSPSAPGFKSSQVRDLREKVEEEEEEEQPITEPNSEEEREDDALCQGEDSEASPASEQIPTGKDAAPGSPGLPAAAGAGPQGKQPAASPAPPGRLALAQRSSGPALRPPPAPALASRASGSAPGPQKASPTIEKLPYVPHSPFHLFSYDFEDSPLSAKEKEAECQQESSGSDSVHLSAYSASDPYNFRSFSSNRYSNFGNNSHHSSRPSSGSSVPTTPTSSLSPQHEARLERSSLSGLLTSSFKQHQESLAAERERRRQEREERLQRIEREERNKFNREYLDKREEQRQAREERYKYLEQLAAEAHEKELRSRSASRGRADLSLDLTSPAAPASPAPLSCSPSSLDSQEALTVSSSSPGTPQPPQASAGGPEPEPEAEAGQVAAEAPEDPAPGHVGAESEAERALEPEPEERASLSEKERQNEALNERDNCSASSISSSSSTLEREDKEDRRSRDSGAGLWSTGVQDAGVNEQCGDILTSKRFMLDMLYAHNRKPTDDEEKGEGETRRPEQGAEAVASLASRISTLQANSFVQDESVRKVDVDCLDNRGSVKAFAEKFNSGDLGKGSISPDGEPNDKVTEKASVQPKTESDYIWDQLMANPRELRIQDMDFTDLGEEDDIDVLDVDLGHREAPGPPPPPPTFLGLPPPPPPPXVDRVPPPPVPGNLLAPPPVFSAPQGLGWPQVPRGQPAFTKKKKTIRLFWNEVRPFEWPCKNNGRCREFLWSKLEPIKVDTSKLEHLFESKSKELAVSKKTAADGKKQEIIVLDSKRSNAINIGLTVLPPPRTIKIAILNFDEYALNKEGIEKILTMIPTEEEKQKIQEAQLASPEVPLGSAEQFLLTLSSISELSARLHLWAFKMDYETTEKEVAEPLLDLKEGIDQLENNKTLGYILSTLLAIGNFLNGTNAKAFELSYLEKVPEVKDTVHKQSLLHHVCTMVVENFPDSSDLYSEIGAVTRSAKVDFDQLQDNLCQMERRCKASWDHLKAIAKHEMKPVLKQRMSEFLKDCAERIIILKIVHRRIINRFHSFLLFMGHPPYAIREVNINKFCRIISEFALEYRTTRERVLQQKQKRANHRERNKTRGKMITDTDEEDEVESGKFSGGSPAPPSQPQGLSYAEDAAEHENMKAVLKTSSPAVEDTTPALGVRTRSRASRGSASSWTMGMDDSPNVTDDAADEIMDRIVKSATQVPSQRVVPRERKRSRANRKSLRRTLKSGLTPEEARALGLVGTSELQL
SIO_010081: FHOD3
subclass of: SO_0000673
so part of: FHOD3
location: complement(join(6638397..6638479,6648539..6648700,6653708..6653882,6655403..6655426,6658969..6659161,6665322..6665512,6670907..6671068,6671814..6671933,6673533..6673715,6685869..6686027,6698553..6699428,6705574..6705852,6718528..6718742,6724435..6724485,6728765..6728899,6747134..6747247,6752301..6752375,6752787..6753145,6755872..6755964,6776319..6776572,6783202..6783345,6789135..6789229,6796930..6797041,6813921..6814015,6869495..6869600,6876077..6876144,6983095..6983159,6992232..6992338,7049222..7049386))
location: region:6638397-7049386:-1
so has part: feature:7049222-7049386:-1:exon
so has part: feature:6992232-6992338:-1:exon
so has part: feature:6983095-6983159:-1:exon
so has part: feature:6876077-6876144:-1:exon
so has part: feature:6869495-6869600:-1:exon
so has part: feature:6813921-6814015:-1:exon
so has part: feature:6796930-6797041:-1:exon
so has part: feature:6789135-6789229:-1:exon
so has part: feature:6783202-6783345:-1:exon
so has part: feature:6776319-6776572:-1:exon
so has part: feature:6755872-6755964:-1:exon
so has part: feature:6752787-6753145:-1:exon
so has part: feature:6752301-6752375:-1:exon
so has part: feature:6747134-6747247:-1:exon
so has part: feature:6728765-6728899:-1:exon
so has part: feature:6724435-6724485:-1:exon
so has part: feature:6718528-6718742:-1:exon
so has part: feature:6705574-6705852:-1:exon
so has part: feature:6698553-6699428:-1:exon
so has part: feature:6685869-6686027:-1:exon
so has part: feature:6673533-6673715:-1:exon
so has part: feature:6671814-6671933:-1:exon
so has part: feature:6670907-6671068:-1:exon
so has part: feature:6665322-6665512:-1:exon
so has part: feature:6658969-6659161:-1:exon
so has part: feature:6655403-6655426:-1:exon
so has part: feature:6653708-6653882:-1:exon
so has part: feature:6648539-6648700:-1:exon
so has part: feature:6638397-6638479:-1:exon

XP_031294796.1
type: Protein
SIO_000068: ncbiprotein

position:6638397:-1
position: 6638397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7049386:-1
position: 7049386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7049222-7049386:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6992232-6992338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6983095-6983159:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6876077-6876144:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6869495-6869600:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6813921-6814015:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6796930-6797041:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6789135-6789229:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6783202-6783345:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6776319-6776572:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6755872-6755964:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6752787-6753145:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6752301-6752375:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:6747134-6747247:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:6728765-6728899:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:6724435-6724485:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:6718528-6718742:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:6705574-6705852:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:6698553-6699428:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:6685869-6686027:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:6673533-6673715:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:6671814-6671933:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:6670907-6671068:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:6665322-6665512:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:6658969-6659161:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:6655403-6655426:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:6653708-6653882:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:6648539-6648700:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:6638397-6638479:-1:exon

MOCOS
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MOCOS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7066327..7112954)
location: region:7066327-7112954:-1
so has part: feature:7066327-7112954:-1:exon
subclass of: SO_0000010

105086901
type: Gene
SIO_000068: ncbigene

position:7066327:-1
position: 7066327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7112954:-1
position: 7112954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7066327-7112954:-1:exon

MOCOS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MOCOS
product: molybdenum cofactor sulfurase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_031438945.1
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7066327..7066527,7068202..7068306,7071202..7071340,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112952))
location: region:7066327-7112952:-1
so has part: feature:7112760-7112952:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7071202-7071340:-1:exon
so has part: feature:7068202-7068306:-1:exon
so has part: feature:7066327-7066527:-1:exon

position:7112952:-1
position: 7112952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112952:-1:exon

position:7112760:-1
position: 7112760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

position:7106211:-1
position: 7106211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7106300:-1
position: 7106300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

position:7102473:-1
position: 7102473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7102539:-1
position: 7102539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

position:7101042:-1
position: 7101042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7101686:-1
position: 7101686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

position:7097278:-1
position: 7097278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7097354:-1
position: 7097354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

position:7095068:-1
position: 7095068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7095267:-1
position: 7095267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

position:7089823:-1
position: 7089823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7089939:-1
position: 7089939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

position:7089000:-1
position: 7089000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7089461:-1
position: 7089461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

position:7085978:-1
position: 7085978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7086140:-1
position: 7086140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

position:7078939:-1
position: 7078939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7079017:-1
position: 7079017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

position:7078096:-1
position: 7078096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7078220:-1
position: 7078220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

position:7074094:-1
position: 7074094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7074199:-1
position: 7074199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7071202-7071340:-1:exon

position:7071202:-1
position: 7071202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7071340:-1
position: 7071340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7068202-7068306:-1:exon

position:7068202:-1
position: 7068202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7068306:-1
position: 7068306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7066327-7066527:-1:exon

position:7066527:-1
position: 7066527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOCOS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MOCOS
product: molybdenum cofactor sulfurase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_031438944.1
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7066327..7066527,7068202..7068306,7071202..7071343,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112952))
location: region:7066327-7112952:-1
so has part: feature:7112760-7112952:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7071202-7071343:-1:exon
so has part: feature:7068202-7068306:-1:exon
so has part: feature:7066327-7066527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112952:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7071202-7071343:-1:exon

position:7071343:-1
position: 7071343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7068202-7068306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7066327-7066527:-1:exon

MOCOS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MOCOS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: molybdenum cofactor sulfurase isoform X2
translation: MAGGAAQPGAELLSFAGFLDSSPQPLAYGYGRRSLRELRAREFSRLAGTVYLDHAGATLFPQSQLTNFTKDLMENVYGNPHSQNISSKLTHDTVEQVRYRILAHFHTSPEDYTVIFTAGSTAALKLVAEAFPWVSPGPESSGSWFCYLTDSHTSVVGMRKITAAMNVTSIPIRPEDMWSAEKQDAAAAGNQDCQPPHLFCYPAQSNFSGTRYPLSWIEEVKSGHTRPMSVPGKWFVLLDAAAYVGTSPLDLSVHQADFVPISFYKIFGFPTGLGALLVNNRSAPLLRKTYFGGGTAAAYLAGDDFYIPRESVAERFEDGTISFLDIIALKHGFDALEHLTGGMENVRQHTFTLARYTYAALSALRYPNGAPVVRIYSDSEFSSPEVQGPVISFNVLDDHGRIIGYSQVDKMASLYNIHVRTGCFCNTGACQRHLGISDEMVKKHLQAGHVCGDDVDLIDGQPTGSVRISFGYMSTLEDAQAFLRFIIATHLCPPHGQQLPLATPGEAGAPPTGSEAQDAVPAIVATHSPSPQEDAPPDARVWNNSLTTVHAVGLCPPLLEATGTQQTPSEKAAGVPDGDLGSRVITNLYIYPIKSCAAFEVTRWPLGNQGLLYDRSWMVVNHNGICLSQKQEPRLCLIQPFIDLQRRIMVIQARGMEPIEVPLEENSERAQICQSKVCADRVNTYDCGEKISSWLSKFFGRPCHLIKQSSDFQRSARRKHGKDQPACTTATLSLVNEAQYLLVNRSSVLELQQQLSTSDENGKEELFPMKDLISRFRANIITNGTRAFEEENWDEVSIGSLRFQVLGPCHRCQMICIDQQTGQRNQDVFQKLSERQERKVNFGVYLMHTALDSSSPCYLSVGSQVLPMLKENTEHDDLSASEKHQDVIS
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7066375..7066527,7068202..7068306,7071202..7071340,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112901))
location: region:7066375-7112901:-1
so has part: feature:7112760-7112901:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7071202-7071340:-1:exon
so has part: feature:7068202-7068306:-1:exon
so has part: feature:7066375-7066527:-1:exon

XP_031294805.1
type: Protein
SIO_000068: ncbiprotein

position:7066375:-1
position: 7066375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7112901:-1
position: 7112901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7071202-7071340:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7068202-7068306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7066375-7066527:-1:exon

MOCOS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MOCOS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: molybdenum cofactor sulfurase isoform X1
translation: MAGGAAQPGAELLSFAGFLDSSPQPLAYGYGRRSLRELRAREFSRLAGTVYLDHAGATLFPQSQLTNFTKDLMENVYGNPHSQNISSKLTHDTVEQVRYRILAHFHTSPEDYTVIFTAGSTAALKLVAEAFPWVSPGPESSGSWFCYLTDSHTSVVGMRKITAAMNVTSIPIRPEDMWSAEKQDAAAAGNQDCQPPHLFCYPAQSNFSGTRYPLSWIEEVKSGHTRPMSVPGKWFVLLDAAAYVGTSPLDLSVHQADFVPISFYKIFGFPTGLGALLVNNRSAPLLRKTYFGGGTAAAYLAGDDFYIPRESVAERFEDGTISFLDIIALKHGFDALEHLTGGMENVRQHTFTLARYTYAALSALRYPNGAPVVRIYSDSEFSSPEVQGPVISFNVLDDHGRIIGYSQVDKMASLYNIHVRTGCFCNTGACQRHLGISDEMVKKHLQAGHVCGDDVDLIDGQPTGSVRISFGYMSTLEDAQAFLRFIIATHLCPPHGQQLPLATPGEAGAPPTGSEAQDAVPAIVATHSPSPQEDAPPDARVWNNSLTTVHAVGLCPPLLEATGTQQTPSEKAAGVPDGDLGSRVITNLYIYPIKSCAAFEVTRWPLGNQGLLYDRSWMVVNHNGICLSQKQEPRLCLIQPFIDLQRRIMVIQARGMEPIEVPLEENSERAQICQSKVCADRVNTYDCGEKISSWLSKFFGRPCHLIKQSSDFQRSARRKHGKDQPACTTATLSLVNEAQYLLVNRSSVLELQQQLSTSSDENGKEELFPMKDLISRFRANIITNGTRAFEEENWDEVSIGSLRFQVLGPCHRCQMICIDQQTGQRNQDVFQKLSERQERKVNFGVYLMHTALDSSSPCYLSVGSQVLPMLKENTEHDDLSASEKHQDVIS
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7066375..7066527,7068202..7068306,7071202..7071343,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112901))
location: region:7066375-7112901:-1
so has part: feature:7112760-7112901:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7071202-7071343:-1:exon
so has part: feature:7068202-7068306:-1:exon
so has part: feature:7066375-7066527:-1:exon

XP_031294804.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7071202-7071343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7068202-7068306:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7066375-7066527:-1:exon

MOCOS
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: MOCOS
product: molybdenum cofactor sulfurase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004132322.1
SIO_010081: MOCOS
so part of: MOCOS
location: complement(join(7068202..7068306,7069680..7069927,7071202..7071343,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112954))
location: region:7068202-7112954:-1
so has part: feature:7112760-7112954:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7071202-7071343:-1:exon
so has part: feature:7069680-7069927:-1:exon
so has part: feature:7068202-7068306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112954:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7071202-7071343:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7069680-7069927:-1:exon

position:7069680:-1
position: 7069680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7069927:-1
position: 7069927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7068202-7068306:-1:exon

MOCOS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MOCOS
product: molybdenum cofactor sulfurase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_031438946.1
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7071805..7072138,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112953))
location: region:7071805-7112953:-1
so has part: feature:7112760-7112953:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7071805-7072138:-1:exon

position:7071805:-1
position: 7071805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7112953:-1
position: 7112953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7071805-7072138:-1:exon

position:7072138:-1
position: 7072138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOCOS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MOCOS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: molybdenum cofactor sulfurase isoform X3
translation: MAGGAAQPGAELLSFAGFLDSSPQPLAYGYGRRSLRELRAREFSRLAGTVYLDHAGATLFPQSQLTNFTKDLMENVYGNPHSQNISSKLTHDTVEQVRYRILAHFHTSPEDYTVIFTAGSTAALKLVAEAFPWVSPGPESSGSWFCYLTDSHTSVVGMRKITAAMNVTSIPIRPEDMWSAEKQDAAAAGNQDCQPPHLFCYPAQSNFSGTRYPLSWIEEVKSGHTRPMSVPGKWFVLLDAAAYVGTSPLDLSVHQADFVPISFYKIFGFPTGLGALLVNNRSAPLLRKTYFGGGTAAAYLAGDDFYIPRESVAERFEDGTISFLDIIALKHGFDALEHLTGGMENVRQHTFTLARYTYAALSALRYPNGAPVVRIYSDSEFSSPEVQGPVISFNVLDDHGRIIGYSQVDKMASLYNIHVRTGCFCNTGACQRHLGISDEMVKKHLQAGHVCGDDVDLIDGQPTGSVRISFGYMSTLEDAQAFLRFIIATHLCPPHGQQLPLATPGEAGAPPTGSEAQDAVPAIVATHSPSPQEDAPPDARVWNNSLTTVHAVGLCPPLLEATGTQQTPSEKAAGVPDGDLGSRVITNLYIYPIKSCAAFEVTRWPLGNQGLLYDRSWMVVNHNGICLSQKQEPRLCLIQPFIDLQRRIMVIQARGMEPIEVPLEENSERAQICQSKVCADRVNTYDCGEKISSWLSKFFGRPCHLIKQSSDFQRSARRKHGKDQPACTTATLSLVNEAQYLLVNRSSVLELQQQLSTRCSV
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7072126..7072138,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112901))
location: region:7072126-7112901:-1
so has part: feature:7112760-7112901:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7072126-7072138:-1:exon

XP_031294806.1
type: Protein
SIO_000068: ncbiprotein

position:7072126:-1
position: 7072126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7072126-7072138:-1:exon

MOCOS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MOCOS
product: molybdenum cofactor sulfurase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031438947.1
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7073276..7073533,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112953))
location: region:7073276-7112953:-1
so has part: feature:7112760-7112953:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7073276-7073533:-1:exon

position:7073276:-1
position: 7073276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112953:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7073276-7073533:-1:exon

position:7073533:-1
position: 7073533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MOCOS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MOCOS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: molybdenum cofactor sulfurase isoform X4
translation: MAGGAAQPGAELLSFAGFLDSSPQPLAYGYGRRSLRELRAREFSRLAGTVYLDHAGATLFPQSQLTNFTKDLMENVYGNPHSQNISSKLTHDTVEQVRYRILAHFHTSPEDYTVIFTAGSTAALKLVAEAFPWVSPGPESSGSWFCYLTDSHTSVVGMRKITAAMNVTSIPIRPEDMWSAEKQDAAAAGNQDCQPPHLFCYPAQSNFSGTRYPLSWIEEVKSGHTRPMSVPGKWFVLLDAAAYVGTSPLDLSVHQADFVPISFYKIFGFPTGLGALLVNNRSAPLLRKTYFGGGTAAAYLAGDDFYIPRESVAERFEDGTISFLDIIALKHGFDALEHLTGGMENVRQHTFTLARYTYAALSALRYPNGAPVVRIYSDSEFSSPEVQGPVISFNVLDDHGRIIGYSQVDKMASLYNIHVRTGCFCNTGACQRHLGISDEMVKKHLQAGHVCGDDVDLIDGQPTGSVRISFGYMSTLEDAQAFLRFIIATHLCPPHGQQLPLATPGEAGAPPTGSEAQDAVPAIVATHSPSPQEDAPPDARVWNNSLTTVHAVGLCPPLLEATGTQQTPSEKAAGVPDGDLGSRVITNLYIYPIKSCAAFEVTRWPLGNQGLLYDRSWMVVNHNGICLSQKQEPRLCLIQPFIDLQRRIMVIQARGMEPIEVPLEENSERAQICQSKVCADRVNTYDCGEKISSWLSKFFGRPCHLIKQSSDFQRSARRKHGKDQPACTTATLSLVNEAQYLLVNRSSVLELQQQLSTRGS
SIO_010081: MOCOS
subclass of: SO_0000673
so part of: MOCOS
location: complement(join(7073524..7073533,7074094..7074199,7078096..7078220,7078939..7079017,7085978..7086140,7089000..7089461,7089823..7089939,7095068..7095267,7097278..7097354,7101042..7101686,7102473..7102539,7106211..7106300,7112760..7112901))
location: region:7073524-7112901:-1
so has part: feature:7112760-7112901:-1:exon
so has part: feature:7106211-7106300:-1:exon
so has part: feature:7102473-7102539:-1:exon
so has part: feature:7101042-7101686:-1:exon
so has part: feature:7097278-7097354:-1:exon
so has part: feature:7095068-7095267:-1:exon
so has part: feature:7089823-7089939:-1:exon
so has part: feature:7089000-7089461:-1:exon
so has part: feature:7085978-7086140:-1:exon
so has part: feature:7078939-7079017:-1:exon
so has part: feature:7078096-7078220:-1:exon
so has part: feature:7074094-7074199:-1:exon
so has part: feature:7073524-7073533:-1:exon

XP_031294807.1
type: Protein
SIO_000068: ncbiprotein

position:7073524:-1
position: 7073524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7112760-7112901:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7106211-7106300:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7102473-7102539:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7101042-7101686:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7097278-7097354:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7095068-7095267:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7089823-7089939:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7089000-7089461:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7085978-7086140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7078939-7079017:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7078096-7078220:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7074094-7074199:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7073524-7073533:-1:exon

ELP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ELP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7122334..7154574)
location: region:7122334-7154574:-1
so has part: feature:7122334-7154574:-1:exon
subclass of: SO_0000010

105086892
type: Gene
SIO_000068: ncbigene

position:7122334:-1
position: 7122334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7154574:-1
position: 7154574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7122334-7154574:-1:exon

ELP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ELP2
product: elongator acetyltransferase complex subunit 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_010977464.2
SIO_010081: ELP2
subclass of: SO_0000673
so part of: ELP2
location: complement(join(7122334..7122897,7123948..7124061,7124608..7124741,7126262..7126383,7127433..7127625,7130185..7130257,7130876..7130933,7131066..7131161,7131711..7131780,7133873..7134061,7137157..7137306,7139887..7140018,7140217..7140317,7141393..7141488,7142594..7142734,7143271..7143337,7144108..7144172,7145514..7145591,7145976..7146120,7149529..7149599,7152137..7152215,7154285..7154574))
location: region:7122334-7154574:-1
so has part: feature:7154285-7154574:-1:exon
so has part: feature:7152137-7152215:-1:exon
so has part: feature:7149529-7149599:-1:exon
so has part: feature:7145976-7146120:-1:exon
so has part: feature:7145514-7145591:-1:exon
so has part: feature:7144108-7144172:-1:exon
so has part: feature:7143271-7143337:-1:exon
so has part: feature:7142594-7142734:-1:exon
so has part: feature:7141393-7141488:-1:exon
so has part: feature:7140217-7140317:-1:exon
so has part: feature:7139887-7140018:-1:exon
so has part: feature:7137157-7137306:-1:exon
so has part: feature:7133873-7134061:-1:exon
so has part: feature:7131711-7131780:-1:exon
so has part: feature:7131066-7131161:-1:exon
so has part: feature:7130876-7130933:-1:exon
so has part: feature:7130185-7130257:-1:exon
so has part: feature:7127433-7127625:-1:exon
so has part: feature:7126262-7126383:-1:exon
so has part: feature:7124608-7124741:-1:exon
so has part: feature:7123948-7124061:-1:exon
so has part: feature:7122334-7122897:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7154285-7154574:-1:exon

position:7154285:-1
position: 7154285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7152137-7152215:-1:exon

position:7152137:-1
position: 7152137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7152215:-1
position: 7152215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7149529-7149599:-1:exon

position:7149529:-1
position: 7149529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7149599:-1
position: 7149599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7145976-7146120:-1:exon

position:7145976:-1
position: 7145976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7146120:-1
position: 7146120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7145514-7145591:-1:exon

position:7145514:-1
position: 7145514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7145591:-1
position: 7145591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7144108-7144172:-1:exon

position:7144108:-1
position: 7144108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7144172:-1
position: 7144172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7143271-7143337:-1:exon

position:7143271:-1
position: 7143271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7143337:-1
position: 7143337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7142594-7142734:-1:exon

position:7142594:-1
position: 7142594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7142734:-1
position: 7142734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7141393-7141488:-1:exon

position:7141393:-1
position: 7141393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7141488:-1
position: 7141488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7140217-7140317:-1:exon

position:7140217:-1
position: 7140217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7140317:-1
position: 7140317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7139887-7140018:-1:exon

position:7139887:-1
position: 7139887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7140018:-1
position: 7140018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7137157-7137306:-1:exon

position:7137157:-1
position: 7137157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7137306:-1
position: 7137306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7133873-7134061:-1:exon

position:7133873:-1
position: 7133873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7134061:-1
position: 7134061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7131711-7131780:-1:exon

position:7131711:-1
position: 7131711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7131780:-1
position: 7131780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7131066-7131161:-1:exon

position:7131066:-1
position: 7131066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7131161:-1
position: 7131161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7130876-7130933:-1:exon

position:7130876:-1
position: 7130876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7130933:-1
position: 7130933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7130185-7130257:-1:exon

position:7130185:-1
position: 7130185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7130257:-1
position: 7130257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7127433-7127625:-1:exon

position:7127433:-1
position: 7127433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7127625:-1
position: 7127625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7126262-7126383:-1:exon

position:7126262:-1
position: 7126262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7126383:-1
position: 7126383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7124608-7124741:-1:exon

position:7124608:-1
position: 7124608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7124741:-1
position: 7124741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7123948-7124061:-1:exon

position:7123948:-1
position: 7123948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7124061:-1
position: 7124061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7122334-7122897:-1:exon

position:7122897:-1
position: 7122897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ELP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ELP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: elongator complex protein 2
translation: MVAPVLETSHVFCCPNRVRGALSWSSGPGGLLAFGTSCSVVLYDPQKRVVITNLNGHTARVNCVQWIYKQDGSPSTELVSGGSDNKVIHWETENNQLLKAVHLQGHEGPVYAVHAAYQRRALHTLLVSAAADSTVRVWCKQGSEVTCLQTLNFGNGFTLALCFSFLPNTDVPVLACGDDDCKIHLFVQQNDQFQKVLVLSGHEDWIRGVEWAAFGRDLFLASCSQDCLIRIWRLNIKSTSLETQEDDNIRLKENTFTIENESIKITFAVTLETVLAGHENWVNAVHWQPSFYKDGVLQQPMRLLSASMDKTMILWAPDEESGVWLEQVRVGEVGGNTLGFYDCQFSEDGSMIIAHAFHGALHLWKQNSTNPKEWTPEIVISGHFDGVQDLKWDPEGEFIITVGTDQTTRLFAPWKRKDQSQVTWHEIARPQIHGYDLKCLAMINRFQFVSGADEKVLRVFSAPRNFVENFCAITGQSLNHVLCNQDGDLPEGATVPALGLSNKAVFQGDIASQPSDEEELLTSTGFEYHQVAFQPSILTEPPTEDHLLQNTLWPEVQKLYGHGYEIFCVACSNSKTLLASACKAAKKEHAAIILWNTTSWKQVQSLVFHSLTVTQMAFSPDDKFLLAVSRDRTWSLWKRQDTIPPELDPVFSLFAFTNKITAVHSRIIWSCDWSPDGRYFFTGSRDKKVVAWGECDSSDDCPEHSIGPCSSVLDVGGAVTAVSVCPMLNPSRRYVVAVGLECGKICLYSWKKTDQVPEVNDWTHCVETSQSQSHTLAIKKLCWKNCNGQTEQNEAEGAEWLHFASCGEDHTVKIHRVNRCAL
SIO_010081: ELP2
subclass of: SO_0000673
so part of: ELP2
location: complement(join(7122741..7122897,7123948..7124061,7124608..7124741,7126262..7126383,7127433..7127625,7130185..7130257,7130876..7130933,7131066..7131161,7131711..7131780,7133873..7134061,7137157..7137306,7139887..7140018,7140217..7140317,7141393..7141488,7142594..7142734,7143271..7143337,7144108..7144172,7145514..7145591,7145976..7146120,7149529..7149599,7152137..7152215,7154285..7154422))
location: region:7122741-7154422:-1
so has part: feature:7154285-7154422:-1:exon
so has part: feature:7152137-7152215:-1:exon
so has part: feature:7149529-7149599:-1:exon
so has part: feature:7145976-7146120:-1:exon
so has part: feature:7145514-7145591:-1:exon
so has part: feature:7144108-7144172:-1:exon
so has part: feature:7143271-7143337:-1:exon
so has part: feature:7142594-7142734:-1:exon
so has part: feature:7141393-7141488:-1:exon
so has part: feature:7140217-7140317:-1:exon
so has part: feature:7139887-7140018:-1:exon
so has part: feature:7137157-7137306:-1:exon
so has part: feature:7133873-7134061:-1:exon
so has part: feature:7131711-7131780:-1:exon
so has part: feature:7131066-7131161:-1:exon
so has part: feature:7130876-7130933:-1:exon
so has part: feature:7130185-7130257:-1:exon
so has part: feature:7127433-7127625:-1:exon
so has part: feature:7126262-7126383:-1:exon
so has part: feature:7124608-7124741:-1:exon
so has part: feature:7123948-7124061:-1:exon
so has part: feature:7122741-7122897:-1:exon

XP_010975766.1
type: Protein
SIO_000068: ncbiprotein

position:7122741:-1
position: 7122741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7154422:-1
position: 7154422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7154285-7154422:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7152137-7152215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7149529-7149599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7145976-7146120:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7145514-7145591:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7144108-7144172:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7143271-7143337:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7142594-7142734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7141393-7141488:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7140217-7140317:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7139887-7140018:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7137157-7137306:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7133873-7134061:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7131711-7131780:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7131066-7131161:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7130876-7130933:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7130185-7130257:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7127433-7127625:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7126262-7126383:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7124608-7124741:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7123948-7124061:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7122741-7122897:-1:exon

SLC39A6
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: SLC39A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7154976..7173104
location: region:7154976-7173104:1
so has part: feature:7154976-7173104:1:exon
subclass of: SO_0000010

105086883
type: Gene
SIO_000068: ncbigene

position:7154976:1
position: 7154976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7173104:1
position: 7173104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7154976-7173104:1:exon

SLC39A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: SLC39A6
product: solute carrier family 39 member 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_010977455.2
SIO_010081: SLC39A6
subclass of: SO_0000673
so part of: SLC39A6
location: join(7154976..7155286,7156949..7157683,7159179..7159362,7160212..7160381,7161387..7161605,7165662..7165767,7168083..7168460,7169647..7169727,7170852..7171042,7171845..7173104)
location: region:7154976-7173104:1
so has part: feature:7154976-7155286:1:exon
so has part: feature:7156949-7157683:1:exon
so has part: feature:7159179-7159362:1:exon
so has part: feature:7160212-7160381:1:exon
so has part: feature:7161387-7161605:1:exon
so has part: feature:7165662-7165767:1:exon
so has part: feature:7168083-7168460:1:exon
so has part: feature:7169647-7169727:1:exon
so has part: feature:7170852-7171042:1:exon
so has part: feature:7171845-7173104:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7154976-7155286:1:exon

position:7155286:1
position: 7155286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7156949-7157683:1:exon

position:7156949:1
position: 7156949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7157683:1
position: 7157683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7159179-7159362:1:exon

position:7159179:1
position: 7159179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7159362:1
position: 7159362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7160212-7160381:1:exon

position:7160212:1
position: 7160212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7160381:1
position: 7160381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7161387-7161605:1:exon

position:7161387:1
position: 7161387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7161605:1
position: 7161605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7165662-7165767:1:exon

position:7165662:1
position: 7165662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7165767:1
position: 7165767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7168083-7168460:1:exon

position:7168083:1
position: 7168083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7168460:1
position: 7168460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7169647-7169727:1:exon

position:7169647:1
position: 7169647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7169727:1
position: 7169727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7170852-7171042:1:exon

position:7170852:1
position: 7170852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7171042:1
position: 7171042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7171845-7173104:1:exon

position:7171845:1
position: 7171845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC39A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: SLC39A6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter ZIP6
translation: MARNLSVILILTVTLSVTHPLHEVGPATAFPQATEKIIPNWESGINVDLAITTQQHHLQQLFHRYGENNSLSVEGFRKLLQNIGIDKIKRIHIHHDHEHHSDREHHSHHNHAASSKNNRKTLCPDHDSDSSSKDPRNSQGKGSHRSEHTNSRRNVLIKDGVGASEVTSTVYNAVSEGTHFLETVETPKHGKLLPKDVNSSTPPSITEKSRVSWLPSRKTNESVSEPRKGFMYSRSTNENTQECFNASKLLTSHGMGIHVPLNATEFNYLCPAIINQIDARSCLIHTTSEKKAEIPPKSNSLQIAWVGGFIAISIISFLSLLGVILVPLMNRVFFKFLLSFLVALAVGTLSGDAFLHLLPHSHASHHHSHSHEEQAMEMKRGPLFSHLSSQNIEESSYFDSTWKGLTALGGLYFMFLVEHVLTLIKQFKDKKKKNQKKPESDDDVEIKKQLSKYESQLSTNEEKVDADDRPEGYLRADSQEPSHFDSQQPAILEEEEVMIAHAHPQEVYNEYVPRGCKNKCHSHFHDTLGQSDDLIHHHHDYHHILHHHHHQNHHPHSHSQRYSREELKDAGIATLAWMVIMGDGLHNFSDGLAIGAAFTEGLSSGLSTSVAVFCHELPHELGDFAVLLKAGMTVKQAVLYNALSAMLAYLGMATGIFIGHYAENVSMWIFALTAGLFMYVALVDMVPEMLHNDASDHGCSRWGYFFLQNAGILLGFGIMLLISIFEHKIVFRINF
SIO_010081: SLC39A6
subclass of: SO_0000673
so part of: SLC39A6
location: join(7156958..7157683,7159179..7159362,7160212..7160381,7161387..7161605,7165662..7165767,7168083..7168460,7169647..7169727,7170852..7171042,7171845..7171997)
location: region:7156958-7171997:1
so has part: feature:7156958-7157683:1:exon
so has part: feature:7159179-7159362:1:exon
so has part: feature:7160212-7160381:1:exon
so has part: feature:7161387-7161605:1:exon
so has part: feature:7165662-7165767:1:exon
so has part: feature:7168083-7168460:1:exon
so has part: feature:7169647-7169727:1:exon
so has part: feature:7170852-7171042:1:exon
so has part: feature:7171845-7171997:1:exon

XP_010975757.1
type: Protein
SIO_000068: ncbiprotein

position:7156958:1
position: 7156958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7171997:1
position: 7171997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7156958-7157683:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7159179-7159362:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7160212-7160381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7161387-7161605:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7165662-7165767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7168083-7168460:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7169647-7169727:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7170852-7171042:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7171845-7171997:1:exon

RPRD1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: RPRD1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7177357..7231099
location: region:7177357-7231099:1
so has part: feature:7177357-7231099:1:exon
subclass of: SO_0000010

105086873
type: Gene
SIO_000068: ncbigene

position:7177357:1
position: 7177357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7231099:1
position: 7231099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7177357-7231099:1:exon

RPRD1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RPRD1A
product: regulation of nuclear pre-mRNA domain containing 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031438949.1
SIO_010081: RPRD1A
subclass of: SO_0000673
so part of: RPRD1A
location: join(7177357..7177673,7199114..7199243,7202016..7202122,7202204..7202301,7205180..7205306,7205416..7205591,7206908..7208016)
location: region:7177357-7208016:1
so has part: feature:7177357-7177673:1:exon
so has part: feature:7199114-7199243:1:exon
so has part: feature:7202016-7202122:1:exon
so has part: feature:7202204-7202301:1:exon
so has part: feature:7205180-7205306:1:exon
so has part: feature:7205416-7205591:1:exon
so has part: feature:7206908-7208016:1:exon

position:7208016:1
position: 7208016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7177357-7177673:1:exon

position:7177673:1
position: 7177673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7199114-7199243:1:exon

position:7199114:1
position: 7199114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7199243:1
position: 7199243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7202016-7202122:1:exon

position:7202016:1
position: 7202016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7202122:1
position: 7202122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7202204-7202301:1:exon

position:7202204:1
position: 7202204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7202301:1
position: 7202301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7205180-7205306:1:exon

position:7205180:1
position: 7205180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7205306:1
position: 7205306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7205416-7205591:1:exon

position:7205416:1
position: 7205416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7205591:1
position: 7205591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7206908-7208016:1:exon

position:7206908:1
position: 7206908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPRD1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: RPRD1A
product: regulation of nuclear pre-mRNA domain containing 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_010977447.2
SIO_010081: RPRD1A
subclass of: SO_0000673
so part of: RPRD1A
location: join(7177358..7177673,7199114..7199243,7202016..7202122,7202204..7202301,7205180..7205306,7205416..7205591,7229633..7231099)
location: region:7177358-7231099:1
so has part: feature:7177358-7177673:1:exon
so has part: feature:7199114-7199243:1:exon
so has part: feature:7202016-7202122:1:exon
so has part: feature:7202204-7202301:1:exon
so has part: feature:7205180-7205306:1:exon
so has part: feature:7205416-7205591:1:exon
so has part: feature:7229633-7231099:1:exon

position:7177358:1
position: 7177358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7177358-7177673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7199114-7199243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7202016-7202122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7202204-7202301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7205180-7205306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7205416-7205591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7229633-7231099:1:exon

position:7229633:1
position: 7229633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPRD1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RPRD1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulation of nuclear pre-mRNA domain-containing protein 1A isoform X2
translation: MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKTVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED
SIO_010081: RPRD1A
subclass of: SO_0000673
so part of: RPRD1A
location: join(7177523..7177673,7199114..7199243,7202016..7202122,7202204..7202301,7205180..7205306,7205416..7205591,7229633..7229782)
location: region:7177523-7229782:1
so has part: feature:7177523-7177673:1:exon
so has part: feature:7199114-7199243:1:exon
so has part: feature:7202016-7202122:1:exon
so has part: feature:7202204-7202301:1:exon
so has part: feature:7205180-7205306:1:exon
so has part: feature:7205416-7205591:1:exon
so has part: feature:7229633-7229782:1:exon

XP_010975749.1
type: Protein
SIO_000068: ncbiprotein

position:7177523:1
position: 7177523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7229782:1
position: 7229782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7177523-7177673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7199114-7199243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7202016-7202122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7202204-7202301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7205180-7205306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7205416-7205591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7229633-7229782:1:exon

RPRD1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: RPRD1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1
translation: MSAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLYLANDVIQNSKRKGPEFTKDFAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKRTYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQEVSLLDKITDKESGERLSKTVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEALAEKEHKLEVLDMGVPSNDVIIISIFFLLKINIKLQSLNCLMFLKIEEKTKTLLFHFILLSHLNWLYITDYKNSIYV
SIO_010081: RPRD1A
subclass of: SO_0000673
so part of: RPRD1A
location: join(7177523..7177673,7199114..7199243,7202016..7202122,7202204..7202301,7205180..7205306,7205416..7205591,7206908..7207114)
location: region:7177523-7207114:1
so has part: feature:7177523-7177673:1:exon
so has part: feature:7199114-7199243:1:exon
so has part: feature:7202016-7202122:1:exon
so has part: feature:7202204-7202301:1:exon
so has part: feature:7205180-7205306:1:exon
so has part: feature:7205416-7205591:1:exon
so has part: feature:7206908-7207114:1:exon

XP_031294809.1
type: Protein
SIO_000068: ncbiprotein

position:7207114:1
position: 7207114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7177523-7177673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7199114-7199243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7202016-7202122:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7202204-7202301:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7205180-7205306:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7205416-7205591:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7206908-7207114:1:exon

C24H18orf21
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: C24H18orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7238218..7245473)
location: region:7238218-7245473:-1
so has part: feature:7238218-7245473:-1:exon
subclass of: SO_0000010

105086864
type: Gene
SIO_000068: ncbigene

position:7238218:-1
position: 7238218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245473:-1
position: 7245473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7238218-7245473:-1:exon

C24H18orf21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C24H18orf21
product: chromosome 24 C18orf21 homolog, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_010977437.2
SIO_010081: C24H18orf21
subclass of: SO_0000673
so part of: C24H18orf21
location: complement(join(7238218..7239481,7241075..7241274,7242754..7242953,7245181..7245203,7245289..7245473))
location: region:7238218-7245473:-1
so has part: feature:7245289-7245473:-1:exon
so has part: feature:7245181-7245203:-1:exon
so has part: feature:7242754-7242953:-1:exon
so has part: feature:7241075-7241274:-1:exon
so has part: feature:7238218-7239481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7245289-7245473:-1:exon

position:7245289:-1
position: 7245289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7245181-7245203:-1:exon

position:7245181:-1
position: 7245181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245203:-1
position: 7245203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7242754-7242953:-1:exon

position:7242754:-1
position: 7242754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7242953:-1
position: 7242953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7241075-7241274:-1:exon

position:7241075:-1
position: 7241075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7241274:-1
position: 7241274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7238218-7239481:-1:exon

position:7239481:-1
position: 7239481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C24H18orf21
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: C24H18orf21
product: chromosome 24 C18orf21 homolog, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_031438950.1
SIO_010081: C24H18orf21
subclass of: SO_0000673
so part of: C24H18orf21
location: complement(join(7238218..7239481,7241075..7241274,7242754..7242953,7244371..7245171))
location: region:7238218-7245171:-1
so has part: feature:7244371-7245171:-1:exon
so has part: feature:7242754-7242953:-1:exon
so has part: feature:7241075-7241274:-1:exon
so has part: feature:7238218-7239481:-1:exon

position:7245171:-1
position: 7245171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7244371-7245171:-1:exon

position:7244371:-1
position: 7244371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7242754-7242953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7241075-7241274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7238218-7239481:-1:exon

C24H18orf21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C24H18orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0711 protein C18orf21 homolog isoform X2
translation: MRQKHYLEAAARKLQDSCPGQARYLLWAYSSSHDDNSTFEETCPYCFQLLVLDNSRVRLKPKAKLTPKIQKLLNREARNYTLSFKEAKIVKKYKDSRSVLLVTCKTCNRTVQHHGKSRSFLSALKSNPTTPTSKLGLNTPERMTLSSANLKHDRSGSKGKSPALTFRTPTSGQSTPICSSKSLGKTKKHFSQLKMLLSQSESQKNPKVDFRNFLSSL
SIO_010081: C24H18orf21
subclass of: SO_0000673
so part of: C24H18orf21
location: complement(join(7239328..7239481,7241075..7241274,7242754..7242953,7245181..7245203,7245289..7245365))
location: region:7239328-7245365:-1
so has part: feature:7245289-7245365:-1:exon
so has part: feature:7245181-7245203:-1:exon
so has part: feature:7242754-7242953:-1:exon
so has part: feature:7241075-7241274:-1:exon
so has part: feature:7239328-7239481:-1:exon

XP_010975739.1
type: Protein
SIO_000068: ncbiprotein

position:7239328:-1
position: 7239328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7245365:-1
position: 7245365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7245289-7245365:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7245181-7245203:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7242754-7242953:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7241075-7241274:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7239328-7239481:-1:exon

C24H18orf21
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: C24H18orf21
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0711 protein C18orf21 homolog isoform X1
translation: MYPVSSNFSLYPSYHPGPSRQSLLGHCQQLRCISAVHSQSSNQNDNSTFEETCPYCFQLLVLDNSRVRLKPKAKLTPKIQKLLNREARNYTLSFKEAKIVKKYKDSRSVLLVTCKTCNRTVQHHGKSRSFLSALKSNPTTPTSKLGLNTPERMTLSSANLKHDRSGSKGKSPALTFRTPTSGQSTPICSSKSLGKTKKHFSQLKMLLSQSESQKNPKVDFRNFLSSL
SIO_010081: C24H18orf21
subclass of: SO_0000673
so part of: C24H18orf21
location: complement(join(7239328..7239481,7241075..7241274,7242754..7242953,7244371..7244500))
location: region:7239328-7244500:-1
so has part: feature:7244371-7244500:-1:exon
so has part: feature:7242754-7242953:-1:exon
so has part: feature:7241075-7241274:-1:exon
so has part: feature:7239328-7239481:-1:exon

XP_031294810.1
type: Protein
SIO_000068: ncbiprotein

position:7244500:-1
position: 7244500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7244371-7244500:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7242754-7242953:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7241075-7241274:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7239328-7239481:-1:exon

TRNAT-GGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAT-GGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7260678..7260749)
location: region:7260678-7260749:-1
so has part: feature:7260678-7260749:-1:exon
subclass of: SO_0000663

116148859
type: Gene
SIO_000068: ncbigene

position:7260678:-1
position: 7260678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7260749:-1
position: 7260749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7260678-7260749:-1:exon

TRNAT-GGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAT-GGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon GGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7260715..7260717),aa:Thr, seq:ggt)
SIO_010081: TRNAT-GGU
subclass of: SO_0000673
so part of: TRNAT-GGU
location: complement(7260678..7260749)
location: region:7260678-7260749:-1
so has part: feature:7260678-7260749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7260678-7260749:-1:exon

TRNAS-AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAS-AGA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7309477..7309548)
location: region:7309477-7309548:-1
so has part: feature:7309477-7309548:-1:exon
subclass of: SO_0000663

116148861
type: Gene
SIO_000068: ncbigene

position:7309477:-1
position: 7309477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7309548:-1
position: 7309548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7309477-7309548:-1:exon

TRNAS-AGA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAS-AGA
product: tRNA-Ser
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA serine (anticodon AGA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7309514..7309516),aa:Ser, seq:aga)
SIO_010081: TRNAS-AGA
subclass of: SO_0000673
so part of: TRNAS-AGA
location: complement(7309477..7309548)
location: region:7309477-7309548:-1
so has part: feature:7309477-7309548:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7309477-7309548:-1:exon

LOC105086857
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086857
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7386070..7419306
location: region:7386070-7419306:1
so has part: feature:7386070-7419306:1:exon
subclass of: SO_0000011

105086857
type: Gene
SIO_000068: ncbigene

position:7386070:1
position: 7386070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7419306:1
position: 7419306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7386070-7419306:1:exon

LOC105086857
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105086857
product: uncharacterized LOC105086857
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004132323.1
SIO_010081: LOC105086857
subclass of: SO_0000673
so part of: LOC105086857
location: join(7386070..7386613,7386939..7387047,7418081..7418228,7419175..7419306)
location: region:7386070-7419306:1
so has part: feature:7386070-7386613:1:exon
so has part: feature:7386939-7387047:1:exon
so has part: feature:7418081-7418228:1:exon
so has part: feature:7419175-7419306:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7386070-7386613:1:exon

position:7386613:1
position: 7386613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7386939-7387047:1:exon

position:7386939:1
position: 7386939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7387047:1
position: 7387047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7418081-7418228:1:exon

position:7418081:1
position: 7418081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7418228:1
position: 7418228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7419175-7419306:1:exon

position:7419175:1
position: 7419175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GALNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: GALNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7415304..7462057)
location: region:7415304-7462057:-1
so has part: feature:7415304-7462057:-1:exon
subclass of: SO_0000010

105086859
type: Gene
SIO_000068: ncbigene

position:7415304:-1
position: 7415304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7462057:-1
position: 7462057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7415304-7462057:-1:exon

GALNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GALNT1
product: polypeptide N-acetylgalactosaminyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_010977428.2
SIO_010081: GALNT1
subclass of: SO_0000673
so part of: GALNT1
location: complement(join(7415304..7417532,7422005..7422139,7422623..7422721,7426159..7426298,7427139..7427319,7428767..7428884,7430976..7431146,7434953..7435160,7440558..7440724,7450292..7450466,7456172..7456415,7462003..7462057))
location: region:7415304-7462057:-1
so has part: feature:7462003-7462057:-1:exon
so has part: feature:7456172-7456415:-1:exon
so has part: feature:7450292-7450466:-1:exon
so has part: feature:7440558-7440724:-1:exon
so has part: feature:7434953-7435160:-1:exon
so has part: feature:7430976-7431146:-1:exon
so has part: feature:7428767-7428884:-1:exon
so has part: feature:7427139-7427319:-1:exon
so has part: feature:7426159-7426298:-1:exon
so has part: feature:7422623-7422721:-1:exon
so has part: feature:7422005-7422139:-1:exon
so has part: feature:7415304-7417532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7462003-7462057:-1:exon

position:7462003:-1
position: 7462003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7456172-7456415:-1:exon

position:7456172:-1
position: 7456172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7456415:-1
position: 7456415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7450292-7450466:-1:exon

position:7450292:-1
position: 7450292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7450466:-1
position: 7450466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7440558-7440724:-1:exon

position:7440558:-1
position: 7440558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7440724:-1
position: 7440724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7434953-7435160:-1:exon

position:7434953:-1
position: 7434953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7435160:-1
position: 7435160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7430976-7431146:-1:exon

position:7430976:-1
position: 7430976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7431146:-1
position: 7431146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7428767-7428884:-1:exon

position:7428767:-1
position: 7428767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7428884:-1
position: 7428884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7427139-7427319:-1:exon

position:7427139:-1
position: 7427139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7427319:-1
position: 7427319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7426159-7426298:-1:exon

position:7426159:-1
position: 7426159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7426298:-1
position: 7426298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7422623-7422721:-1:exon

position:7422623:-1
position: 7422623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7422721:-1
position: 7422721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7422005-7422139:-1:exon

position:7422005:-1
position: 7422005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7422139:-1
position: 7422139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7415304-7417532:-1:exon

position:7417532:-1
position: 7417532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GALNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: GALNT1
product: polypeptide N-acetylgalactosaminyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_031438951.1
SIO_010081: GALNT1
subclass of: SO_0000673
so part of: GALNT1
location: complement(join(7415304..7417532,7422005..7422139,7422623..7422721,7426159..7426298,7427139..7427319,7428767..7428884,7430976..7431146,7434953..7435160,7440558..7440724,7450292..7450466,7456172..7456415,7459007..7459126))
location: region:7415304-7459126:-1
so has part: feature:7459007-7459126:-1:exon
so has part: feature:7456172-7456415:-1:exon
so has part: feature:7450292-7450466:-1:exon
so has part: feature:7440558-7440724:-1:exon
so has part: feature:7434953-7435160:-1:exon
so has part: feature:7430976-7431146:-1:exon
so has part: feature:7428767-7428884:-1:exon
so has part: feature:7427139-7427319:-1:exon
so has part: feature:7426159-7426298:-1:exon
so has part: feature:7422623-7422721:-1:exon
so has part: feature:7422005-7422139:-1:exon
so has part: feature:7415304-7417532:-1:exon

position:7459126:-1
position: 7459126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7459007-7459126:-1:exon

position:7459007:-1
position: 7459007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7456172-7456415:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7450292-7450466:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7440558-7440724:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7434953-7435160:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7430976-7431146:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7428767-7428884:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7427139-7427319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7426159-7426298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7422623-7422721:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7422005-7422139:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7415304-7417532:-1:exon

GALNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GALNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 1
translation: MRKFAYCKVVLATSLIWVLLDMFLLLYFSECNKCDEKKERGLPAGDVLEPVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRHKLQCRPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSIRDCNGSRSQQWLLRNVTLPEIF
SIO_010081: GALNT1
subclass of: SO_0000673
so part of: GALNT1
location: complement(join(7417386..7417532,7422005..7422139,7422623..7422721,7426159..7426298,7427139..7427319,7428767..7428884,7430976..7431146,7434953..7435160,7440558..7440724,7450292..7450466,7456172..7456310))
location: region:7417386-7456310:-1
so has part: feature:7456172-7456310:-1:exon
so has part: feature:7450292-7450466:-1:exon
so has part: feature:7440558-7440724:-1:exon
so has part: feature:7434953-7435160:-1:exon
so has part: feature:7430976-7431146:-1:exon
so has part: feature:7428767-7428884:-1:exon
so has part: feature:7427139-7427319:-1:exon
so has part: feature:7426159-7426298:-1:exon
so has part: feature:7422623-7422721:-1:exon
so has part: feature:7422005-7422139:-1:exon
so has part: feature:7417386-7417532:-1:exon

XP_031294811.1
type: Protein
SIO_000068: ncbiprotein

position:7417386:-1
position: 7417386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7456310:-1
position: 7456310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7456172-7456310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7450292-7450466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7440558-7440724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7434953-7435160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7430976-7431146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7428767-7428884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7427139-7427319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7426159-7426298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7422623-7422721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7422005-7422139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7417386-7417532:-1:exon

GALNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: GALNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: polypeptide N-acetylgalactosaminyltransferase 1
translation: MRKFAYCKVVLATSLIWVLLDMFLLLYFSECNKCDEKKERGLPAGDVLEPVQKPHEGPGEMGKPVVIPKEDQEKMKEMFKINQFNLMASEMIALNRSLPDVRLEGCKTKVYPDNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMLEEIVLVDDASERDFLKRPLESYVKKLKVPVHVIRMEQRSGLIRARLKGAAVSKGQVITFLDAHCECTVGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGLRHKLQCRPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSYTANKEIRTDDLCLDVSKLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSIRDCNGSRSQQWLLRNVTLPEIF
SIO_010081: GALNT1
subclass of: SO_0000673
so part of: GALNT1
location: complement(join(7417386..7417532,7422005..7422139,7422623..7422721,7426159..7426298,7427139..7427319,7428767..7428884,7430976..7431146,7434953..7435160,7440558..7440724,7450292..7450466,7456172..7456310))
location: region:7417386-7456310:-1
so has part: feature:7456172-7456310:-1:exon
so has part: feature:7450292-7450466:-1:exon
so has part: feature:7440558-7440724:-1:exon
so has part: feature:7434953-7435160:-1:exon
so has part: feature:7430976-7431146:-1:exon
so has part: feature:7428767-7428884:-1:exon
so has part: feature:7427139-7427319:-1:exon
so has part: feature:7426159-7426298:-1:exon
so has part: feature:7422623-7422721:-1:exon
so has part: feature:7422005-7422139:-1:exon
so has part: feature:7417386-7417532:-1:exon

XP_010975730.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7456172-7456310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7450292-7450466:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7440558-7440724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7434953-7435160:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7430976-7431146:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7428767-7428884:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7427139-7427319:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7426159-7426298:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7422623-7422721:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7422005-7422139:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7417386-7417532:-1:exon

LOC105087092
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105087092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7521830..7544869)
location: region:7521830-7544869:-1
so has part: feature:7521830-7544869:-1:exon

105087092
type: Gene
SIO_000068: ncbigene

position:7521830:-1
position: 7521830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7544869:-1
position: 7544869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7521830-7544869:-1:exon

LOC105087092
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105087092
product: uncharacterized LOC105087092
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132325.1
SIO_010081: LOC105087092
so part of: LOC105087092
location: complement(join(7521830..7525683,7537451..7537601,7544696..7544869))
location: region:7521830-7544869:-1
so has part: feature:7544696-7544869:-1:exon
so has part: feature:7537451-7537601:-1:exon
so has part: feature:7521830-7525683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7544696-7544869:-1:exon

position:7544696:-1
position: 7544696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7537451-7537601:-1:exon

position:7537451:-1
position: 7537451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7537601:-1
position: 7537601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7521830-7525683:-1:exon

position:7525683:-1
position: 7525683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

INO80C
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: INO80C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7544901..7561539
location: region:7544901-7561539:1
so has part: feature:7544901-7561539:1:exon
subclass of: SO_0000010

105086847
type: Gene
SIO_000068: ncbigene

position:7544901:1
position: 7544901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7561539:1
position: 7561539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7544901-7561539:1:exon

INO80C
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: INO80C
product: INO80 complex subunit C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XR_004132324.1
SIO_010081: INO80C
so part of: INO80C
location: join(7544901..7545206,7554263..7554373,7555423..7555534,7556467..7556656,7561159..7561293)
location: region:7544901-7561293:1
so has part: feature:7544901-7545206:1:exon
so has part: feature:7554263-7554373:1:exon
so has part: feature:7555423-7555534:1:exon
so has part: feature:7556467-7556656:1:exon
so has part: feature:7561159-7561293:1:exon

position:7561293:1
position: 7561293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7544901-7545206:1:exon

position:7545206:1
position: 7545206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7554263-7554373:1:exon

position:7554263:1
position: 7554263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7554373:1
position: 7554373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7555423-7555534:1:exon

position:7555423:1
position: 7555423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7555534:1
position: 7555534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7556467-7556656:1:exon

position:7556467:1
position: 7556467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7556656:1
position: 7556656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7561159-7561293:1:exon

position:7561159:1
position: 7561159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

INO80C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INO80C
product: INO80 complex subunit C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010977423.2
SIO_010081: INO80C
subclass of: SO_0000673
so part of: INO80C
location: join(7544906..7545206,7554263..7554373,7555423..7555534,7556467..7556534,7561159..7561539)
location: region:7544906-7561539:1
so has part: feature:7544906-7545206:1:exon
so has part: feature:7554263-7554373:1:exon
so has part: feature:7555423-7555534:1:exon
so has part: feature:7556467-7556534:1:exon
so has part: feature:7561159-7561539:1:exon

position:7544906:1
position: 7544906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7544906-7545206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7554263-7554373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7555423-7555534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7556467-7556534:1:exon

position:7556534:1
position: 7556534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7561159-7561539:1:exon

INO80C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INO80C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: INO80 complex subunit C isoform X1
translation: MAAQIPIVATTSTPGIARNSKKRPASPSHNGSSAGGYSASKKKKVSASGFAQGISMEAMSENKMVPSDFSTGPMEKAARPLPFKDPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP
SIO_010081: INO80C
subclass of: SO_0000673
so part of: INO80C
location: join(7545051..7545206,7554263..7554373,7555423..7555534,7556467..7556534,7561159..7561290)
location: region:7545051-7561290:1
so has part: feature:7545051-7545206:1:exon
so has part: feature:7554263-7554373:1:exon
so has part: feature:7555423-7555534:1:exon
so has part: feature:7556467-7556534:1:exon
so has part: feature:7561159-7561290:1:exon

XP_010975725.1
type: Protein
SIO_000068: ncbiprotein

position:7545051:1
position: 7545051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7561290:1
position: 7561290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7545051-7545206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7554263-7554373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7555423-7555534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7556467-7556534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7561159-7561290:1:exon

INO80C
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: INO80C
product: INO80 complex subunit C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_031438954.1
SIO_010081: INO80C
subclass of: SO_0000673
so part of: INO80C
location: join(7545322..7545611,7554263..7554373,7555423..7555534,7556467..7556534,7561159..7561539)
location: region:7545322-7561539:1
so has part: feature:7545322-7545611:1:exon
so has part: feature:7554263-7554373:1:exon
so has part: feature:7555423-7555534:1:exon
so has part: feature:7556467-7556534:1:exon
so has part: feature:7561159-7561539:1:exon

position:7545322:1
position: 7545322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7545322-7545611:1:exon

position:7545611:1
position: 7545611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7554263-7554373:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7555423-7555534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7556467-7556534:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7561159-7561539:1:exon

INO80C
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: INO80C
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: INO80 complex subunit C isoform X2
translation: MEAMSENKMVPSDFSTGPMEKAARPLPFKDPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSDVSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP
SIO_010081: INO80C
subclass of: SO_0000673
so part of: INO80C
location: join(7554272..7554373,7555423..7555534,7556467..7556534,7561159..7561290)
location: region:7554272-7561290:1
so has part: feature:7554272-7554373:1:exon
so has part: feature:7555423-7555534:1:exon
so has part: feature:7556467-7556534:1:exon
so has part: feature:7561159-7561290:1:exon

XP_031294814.1
type: Protein
SIO_000068: ncbiprotein

position:7554272:1
position: 7554272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7554272-7554373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7555423-7555534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7556467-7556534:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7561159-7561290:1:exon

LOC116148781
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148781
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7604479..7610510)
location: region:7604479-7610510:-1
so has part: feature:7604479-7610510:-1:exon
subclass of: SO_0000011

116148781
type: Gene
SIO_000068: ncbigene

position:7604479:-1
position: 7604479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7610510:-1
position: 7610510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7604479-7610510:-1:exon

LOC116148781
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148781
product: uncharacterized LOC116148781, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004132331.1
SIO_010081: LOC116148781
subclass of: SO_0000673
so part of: LOC116148781
location: complement(join(7604479..7605010,7609663..7609873,7610428..7610510))
location: region:7604479-7610510:-1
so has part: feature:7610428-7610510:-1:exon
so has part: feature:7609663-7609873:-1:exon
so has part: feature:7604479-7605010:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7610428-7610510:-1:exon

position:7610428:-1
position: 7610428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7609663-7609873:-1:exon

position:7609663:-1
position: 7609663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7609873:-1
position: 7609873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7604479-7605010:-1:exon

position:7605010:-1
position: 7605010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC116148781
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148781
product: uncharacterized LOC116148781, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004132332.1
SIO_010081: LOC116148781
subclass of: SO_0000673
so part of: LOC116148781
location: complement(join(7604479..7605010,7609663..7609873,7610415..7610472))
location: region:7604479-7610472:-1
so has part: feature:7610415-7610472:-1:exon
so has part: feature:7609663-7609873:-1:exon
so has part: feature:7604479-7605010:-1:exon

position:7610472:-1
position: 7610472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7610415-7610472:-1:exon

position:7610415:-1
position: 7610415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7609663-7609873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7604479-7605010:-1:exon

ZNF396
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ZNF396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7610106..7615932
location: region:7610106-7615932:1
so has part: feature:7610106-7615932:1:exon
subclass of: SO_0000010

105087082
type: Gene
SIO_000068: ncbigene

position:7610106:1
position: 7610106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7615932:1
position: 7615932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7610106-7615932:1:exon

ZNF396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZNF396
product: zinc finger protein 396, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_031438961.1
SIO_010081: ZNF396
subclass of: SO_0000673
so part of: ZNF396
location: join(7610106..7610201,7612420..7612910,7613179..7613323,7614160..7614661,7615047..7615932)
location: region:7610106-7615932:1
so has part: feature:7610106-7610201:1:exon
so has part: feature:7612420-7612910:1:exon
so has part: feature:7613179-7613323:1:exon
so has part: feature:7614160-7614661:1:exon
so has part: feature:7615047-7615932:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7610106-7610201:1:exon

position:7610201:1
position: 7610201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7612420-7612910:1:exon

position:7612420:1
position: 7612420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7612910:1
position: 7612910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7613179-7613323:1:exon

position:7613179:1
position: 7613179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7613323:1
position: 7613323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7614160-7614661:1:exon

position:7614160:1
position: 7614160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7614661:1
position: 7614661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7615047-7615932:1:exon

position:7615047:1
position: 7615047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZNF396
product: zinc finger protein 396, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_031438962.1
SIO_010081: ZNF396
subclass of: SO_0000673
so part of: ZNF396
location: join(7610559..7610682,7612420..7612910,7613179..7613323,7614160..7614661,7615047..7615932)
location: region:7610559-7615932:1
so has part: feature:7610559-7610682:1:exon
so has part: feature:7612420-7612910:1:exon
so has part: feature:7613179-7613323:1:exon
so has part: feature:7614160-7614661:1:exon
so has part: feature:7615047-7615932:1:exon

position:7610559:1
position: 7610559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7610559-7610682:1:exon

position:7610682:1
position: 7610682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7612420-7612910:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7613179-7613323:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7614160-7614661:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7615047-7615932:1:exon

ZNF396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZNF396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 396
translation: MSAKLRESSKLLPRTSEDPDCILVVKMEEGGQAGNTVSGRHWSSFYSSETYRQRFRQFDYQESSGPREALSRLRELCCQWLRPEVHTKEQILELLVLEQFLAMLPEELQAWFQENRPESGEEAVVMLEELEEEHDGEVEQVFFGQNEDMLAKKLPTCEITQETPRSQLKPTKKQLPWASKELHSLKQNDKDTGALNVKSASRQKTSSGKEPHYKVSNTLHVNASQSFTFRGSCEQERKSERRQGSRPRKKQHKCDECGKVFSQSSALNLHQRIHSGEKPYTCDVCAKAFSRSAVLIQHRRIHTGEKPFKCHECGKAFSQSSNLFRHRKKSHQCYEGIKAFTENFFNRGEDTGTNTPCKI
SIO_010081: ZNF396
subclass of: SO_0000673
so part of: ZNF396
location: join(7612491..7612910,7613179..7613323,7614160..7614661,7615047..7615059)
location: region:7612491-7615059:1
so has part: feature:7612491-7612910:1:exon
so has part: feature:7613179-7613323:1:exon
so has part: feature:7614160-7614661:1:exon
so has part: feature:7615047-7615059:1:exon

XP_031294821.1
type: Protein
SIO_000068: ncbiprotein

position:7612491:1
position: 7612491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7615059:1
position: 7615059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7612491-7612910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7613179-7613323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7614160-7614661:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615047-7615059:1:exon

ZNF396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZNF396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 396
translation: MSAKLRESSKLLPRTSEDPDCILVVKMEEGGQAGNTVSGRHWSSFYSSETYRQRFRQFDYQESSGPREALSRLRELCCQWLRPEVHTKEQILELLVLEQFLAMLPEELQAWFQENRPESGEEAVVMLEELEEEHDGEVEQVFFGQNEDMLAKKLPTCEITQETPRSQLKPTKKQLPWASKELHSLKQNDKDTGALNVKSASRQKTSSGKEPHYKVSNTLHVNASQSFTFRGSCEQERKSERRQGSRPRKKQHKCDECGKVFSQSSALNLHQRIHSGEKPYTCDVCAKAFSRSAVLIQHRRIHTGEKPFKCHECGKAFSQSSNLFRHRKKSHQCYEGIKAFTENFFNRGEDTGTNTPCKI
SIO_010081: ZNF396
subclass of: SO_0000673
so part of: ZNF396
location: join(7612491..7612910,7613179..7613323,7614160..7614661,7615047..7615059)
location: region:7612491-7615059:1
so has part: feature:7612491-7612910:1:exon
so has part: feature:7613179-7613323:1:exon
so has part: feature:7614160-7614661:1:exon
so has part: feature:7615047-7615059:1:exon

XP_031294822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7612491-7612910:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7613179-7613323:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7614160-7614661:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7615047-7615059:1:exon

ZNF24
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ZNF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7623483..7654617
location: region:7623483-7654617:1
so has part: feature:7623483-7654617:1:exon
subclass of: SO_0000010

105086796
type: Gene
SIO_000068: ncbigene

position:7623483:1
position: 7623483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7654617:1
position: 7654617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7623483-7654617:1:exon

ZNF24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZNF24
product: zinc finger protein 24, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031438960.1
SIO_010081: ZNF24
subclass of: SO_0000673
so part of: ZNF24
location: join(7623483..7623604,7625423..7625924,7626153..7626300,7654497..7654617)
location: region:7623483-7654617:1
so has part: feature:7623483-7623604:1:exon
so has part: feature:7625423-7625924:1:exon
so has part: feature:7626153-7626300:1:exon
so has part: feature:7654497-7654617:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7623483-7623604:1:exon

position:7623604:1
position: 7623604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7625423-7625924:1:exon

position:7625423:1
position: 7625423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7625924:1
position: 7625924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7626153-7626300:1:exon

position:7626153:1
position: 7626153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7626300:1
position: 7626300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7654497-7654617:1:exon

position:7654497:1
position: 7654497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZNF24
product: zinc finger protein 24, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_010977381.2
SIO_010081: ZNF24
subclass of: SO_0000673
so part of: ZNF24
location: join(7623483..7623604,7625423..7625924,7626153..7626300,7628409..7633301)
location: region:7623483-7633301:1
so has part: feature:7623483-7623604:1:exon
so has part: feature:7625423-7625924:1:exon
so has part: feature:7626153-7626300:1:exon
so has part: feature:7628409-7633301:1:exon

position:7633301:1
position: 7633301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7623483-7623604:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7625423-7625924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7626153-7626300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7628409-7633301:1:exon

position:7628409:1
position: 7628409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF24
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZNF24
product: zinc finger protein 24, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_031438959.1
SIO_010081: ZNF24
subclass of: SO_0000673
so part of: ZNF24
location: join(7624011..7624248,7625423..7625924,7626153..7626300,7628409..7633301)
location: region:7624011-7633301:1
so has part: feature:7624011-7624248:1:exon
so has part: feature:7625423-7625924:1:exon
so has part: feature:7626153-7626300:1:exon
so has part: feature:7628409-7633301:1:exon

position:7624011:1
position: 7624011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7624011-7624248:1:exon

position:7624248:1
position: 7624248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7625423-7625924:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7626153-7626300:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7628409-7633301:1:exon

ZNF24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZNF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 24 isoform X2
translation: MSVQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEVFRQRFRQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVREHHPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEEIVSQEEAQGLPSSELDAVESQLKWASWELHSLRHCVGV
SIO_010081: ZNF24
subclass of: SO_0000673
so part of: ZNF24
location: join(7625505..7625924,7626153..7626300,7654497..7654507)
location: region:7625505-7654507:1
so has part: feature:7625505-7625924:1:exon
so has part: feature:7626153-7626300:1:exon
so has part: feature:7654497-7654507:1:exon

XP_031294820.1
type: Protein
SIO_000068: ncbiprotein

position:7625505:1
position: 7625505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7654507:1
position: 7654507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7625505-7625924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7626153-7626300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7654497-7654507:1:exon

ZNF24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZNF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 24 isoform X1
translation: MSVQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEVFRQRFRQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVREHHPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEEIVSQEEAQGLPSSELDAVESQLKWASWELHSLRHCDDDARTENGALAPKQEIPSAVESHEVPGTLNIGVPQIYKYGEACFPKGRFERKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKLLNVVKV
SIO_010081: ZNF24
subclass of: SO_0000673
so part of: ZNF24
location: join(7625505..7625924,7626153..7626300,7628409..7628947)
location: region:7625505-7628947:1
so has part: feature:7625505-7625924:1:exon
so has part: feature:7626153-7626300:1:exon
so has part: feature:7628409-7628947:1:exon

XP_010975683.2
type: Protein
SIO_000068: ncbiprotein

position:7628947:1
position: 7628947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7625505-7625924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7626153-7626300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7628409-7628947:1:exon

ZNF24
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZNF24
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 24 isoform X1
translation: MSVQSVEEDSILIIPTPDEEEKILRVKLEEDPDGEEGSSIPWNHLPDPEVFRQRFRQFGYQDSPGPREAVSQLRELCRLWLRPETHTKEQILELVVLEQFVAILPKELQTWVREHHPENGEEAVTVLEDLESELDDPGQPVSLRRRKREVLVEEIVSQEEAQGLPSSELDAVESQLKWASWELHSLRHCDDDARTENGALAPKQEIPSAVESHEVPGTLNIGVPQIYKYGEACFPKGRFERKRNPSRKKQHICDECGKHFSQGSALILHQRIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTGEKPYECVQCGKSYSQSSNLFRHQRRHNAEKLLNVVKV
SIO_010081: ZNF24
subclass of: SO_0000673
so part of: ZNF24
location: join(7625505..7625924,7626153..7626300,7628409..7628947)
location: region:7625505-7628947:1
so has part: feature:7625505-7625924:1:exon
so has part: feature:7626153-7626300:1:exon
so has part: feature:7628409-7628947:1:exon

XP_031294819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7625505-7625924:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7626153-7626300:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7628409-7628947:1:exon

LOC105086804
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7626248..7655374)
location: region:7626248-7655374:-1
so has part: feature:7626248-7655374:-1:exon
subclass of: SO_0000010

105086804
type: Gene
SIO_000068: ncbigene

position:7626248:-1
position: 7626248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7655374:-1
position: 7655374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7626248-7655374:-1:exon

LOC105086804
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105086804
product: zinc finger protein 271, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XR_004132327.1
SIO_010081: LOC105086804
so part of: LOC105086804
location: complement(join(7626248..7626378,7654367..7654601,7655232..7655374))
location: region:7626248-7655374:-1
so has part: feature:7655232-7655374:-1:exon
so has part: feature:7654367-7654601:-1:exon
so has part: feature:7626248-7626378:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7655232-7655374:-1:exon

position:7655232:-1
position: 7655232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7654367-7654601:-1:exon

position:7654367:-1
position: 7654367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7654601:-1
position: 7654601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7626248-7626378:-1:exon

position:7626378:-1
position: 7626378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105086804
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105086804
product: zinc finger protein 271, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XR_004132326.1
SIO_010081: LOC105086804
so part of: LOC105086804
location: complement(join(7637639..7638109,7654367..7654601,7655232..7655373))
location: region:7637639-7655373:-1
so has part: feature:7655232-7655373:-1:exon
so has part: feature:7654367-7654601:-1:exon
so has part: feature:7637639-7638109:-1:exon

position:7637639:-1
position: 7637639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7655373:-1
position: 7655373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7655232-7655373:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7654367-7654601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7637639-7638109:-1:exon

position:7638109:-1
position: 7638109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105086804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086804
product: zinc finger protein 271, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_010977391.2
SIO_010081: LOC105086804
subclass of: SO_0000673
so part of: LOC105086804
location: complement(join(7643237..7647113,7654367..7654601,7655232..7655371))
location: region:7643237-7655371:-1
so has part: feature:7655232-7655371:-1:exon
so has part: feature:7654367-7654601:-1:exon
so has part: feature:7643237-7647113:-1:exon

position:7643237:-1
position: 7643237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7655371:-1
position: 7655371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7655232-7655371:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7654367-7654601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7643237-7647113:-1:exon

position:7647113:-1
position: 7647113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105086804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086804
product: zinc finger protein 271, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_010977406.2
SIO_010081: LOC105086804
subclass of: SO_0000673
so part of: LOC105086804
location: complement(join(7643237..7647113,7654367..7654601,7655124..7655224))
location: region:7643237-7655224:-1
so has part: feature:7655124-7655224:-1:exon
so has part: feature:7654367-7654601:-1:exon
so has part: feature:7643237-7647113:-1:exon

position:7655224:-1
position: 7655224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7655124-7655224:-1:exon

position:7655124:-1
position: 7655124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7654367-7654601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7643237-7647113:-1:exon

LOC105086804
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086804
product: zinc finger protein 271, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_010977398.2
SIO_010081: LOC105086804
subclass of: SO_0000673
so part of: LOC105086804
location: complement(join(7643237..7647113,7654367..7654601,7654940..7654956))
location: region:7643237-7654956:-1
so has part: feature:7654940-7654956:-1:exon
so has part: feature:7654367-7654601:-1:exon
so has part: feature:7643237-7647113:-1:exon

position:7654956:-1
position: 7654956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7654940-7654956:-1:exon

position:7654940:-1
position: 7654940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7654367-7654601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7643237-7647113:-1:exon

LOC105086804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271
translation: MVILQLLPEVSSVRLQSMEGQFNDESQEHRPLSDGETEAKIGELASEEEITGKTESLTEESGNPRDDVLQDSECREFCEFGGKLNENDQNLFKRRQHNCDECGQSFAWSTGLIRHQRTHWEKPYECDKCGKTFSVSSALVLHQRIHTGEKPYPCNWCIKSFSRSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHTGEKPYQCSHCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKHQRIHTGEKPYRCDVCGKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRRIHTGEKPYKCNECGKAFNQSSVLILHQRIHTGEKPYPCNQCSKTFSRLSDLINHQRIHTGEKPYPCNQCSKMFSRRSDLVKHHRIHTGEKPYECDACGKTFSQSSNLILHQRIHTGEKPYPCSDCAKSFSRRSDLVKHQRIHTGEKPYACNECSKSFSQSSDLTKHQRVHSGERPYHCNSCEKAFSQSSDLILHQRIHTGEKPYPCTQCGRSFSQNSDLIKHQRIHTGERPYRCNECGKAFSQCSALILHQRIHTGEKPYPCDQCGKSFSRRSDLINHQRVHTSEKPYKCDACGKAFSACTDRVERQGIHTGEKPHRCVQCSRSFSQLSDLINHEKVHPGEDTLNVMNVGTPLVYIHQLYSVPETFCQKKIL
SIO_010081: LOC105086804
subclass of: SO_0000673
so part of: LOC105086804
location: complement(join(7645159..7647113,7654367..7654466))
location: region:7645159-7654466:-1
so has part: feature:7654367-7654466:-1:exon
so has part: feature:7645159-7647113:-1:exon

XP_010975693.1
type: Protein
SIO_000068: ncbiprotein

position:7645159:-1
position: 7645159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7654466:-1
position: 7654466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7654367-7654466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7645159-7647113:-1:exon

LOC105086804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271
translation: MVILQLLPEVSSVRLQSMEGQFNDESQEHRPLSDGETEAKIGELASEEEITGKTESLTEESGNPRDDVLQDSECREFCEFGGKLNENDQNLFKRRQHNCDECGQSFAWSTGLIRHQRTHWEKPYECDKCGKTFSVSSALVLHQRIHTGEKPYPCNWCIKSFSRSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHTGEKPYQCSHCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKHQRIHTGEKPYRCDVCGKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRRIHTGEKPYKCNECGKAFNQSSVLILHQRIHTGEKPYPCNQCSKTFSRLSDLINHQRIHTGEKPYPCNQCSKMFSRRSDLVKHHRIHTGEKPYECDACGKTFSQSSNLILHQRIHTGEKPYPCSDCAKSFSRRSDLVKHQRIHTGEKPYACNECSKSFSQSSDLTKHQRVHSGERPYHCNSCEKAFSQSSDLILHQRIHTGEKPYPCTQCGRSFSQNSDLIKHQRIHTGERPYRCNECGKAFSQCSALILHQRIHTGEKPYPCDQCGKSFSRRSDLINHQRVHTSEKPYKCDACGKAFSACTDRVERQGIHTGEKPHRCVQCSRSFSQLSDLINHEKVHPGEDTLNVMNVGTPLVYIHQLYSVPETFCQKKIL
SIO_010081: LOC105086804
subclass of: SO_0000673
so part of: LOC105086804
location: complement(join(7645159..7647113,7654367..7654466))
location: region:7645159-7654466:-1
so has part: feature:7654367-7654466:-1:exon
so has part: feature:7645159-7647113:-1:exon

XP_010975700.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7654367-7654466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7645159-7647113:-1:exon

LOC105086804
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086804
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 271
translation: MVILQLLPEVSSVRLQSMEGQFNDESQEHRPLSDGETEAKIGELASEEEITGKTESLTEESGNPRDDVLQDSECREFCEFGGKLNENDQNLFKRRQHNCDECGQSFAWSTGLIRHQRTHWEKPYECDKCGKTFSVSSALVLHQRIHTGEKPYPCNWCIKSFSRSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHTGEKPYQCSHCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKHQRIHTGEKPYRCDVCGKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRRIHTGEKPYKCNECGKAFNQSSVLILHQRIHTGEKPYPCNQCSKTFSRLSDLINHQRIHTGEKPYPCNQCSKMFSRRSDLVKHHRIHTGEKPYECDACGKTFSQSSNLILHQRIHTGEKPYPCSDCAKSFSRRSDLVKHQRIHTGEKPYACNECSKSFSQSSDLTKHQRVHSGERPYHCNSCEKAFSQSSDLILHQRIHTGEKPYPCTQCGRSFSQNSDLIKHQRIHTGERPYRCNECGKAFSQCSALILHQRIHTGEKPYPCDQCGKSFSRRSDLINHQRVHTSEKPYKCDACGKAFSACTDRVERQGIHTGEKPHRCVQCSRSFSQLSDLINHEKVHPGEDTLNVMNVGTPLVYIHQLYSVPETFCQKKIL
SIO_010081: LOC105086804
subclass of: SO_0000673
so part of: LOC105086804
location: complement(join(7645159..7647113,7654367..7654466))
location: region:7645159-7654466:-1
so has part: feature:7654367-7654466:-1:exon
so has part: feature:7645159-7647113:-1:exon

XP_010975708.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7654367-7654466:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7645159-7647113:-1:exon

LOC105086804
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9838
gene: LOC105086804
product: zinc finger protein 271, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004132328.1
SIO_010081: LOC105086804
so part of: LOC105086804
location: complement(join(7649913..7649927,7654367..7654601,7655232..7655374))
location: region:7649913-7655374:-1
so has part: feature:7655232-7655374:-1:exon
so has part: feature:7654367-7654601:-1:exon
so has part: feature:7649913-7649927:-1:exon

position:7649913:-1
position: 7649913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7655232-7655374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7654367-7654601:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7649913-7649927:-1:exon

position:7649927:-1
position: 7649927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZSCAN30
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ZSCAN30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7657080..7672091
location: region:7657080-7672091:1
so has part: feature:7657080-7672091:1:exon
subclass of: SO_0000010

105087078
type: Gene
SIO_000068: ncbigene

position:7657080:1
position: 7657080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7672091:1
position: 7672091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7657080-7672091:1:exon

ZSCAN30
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ZSCAN30
product: zinc finger and SCAN domain containing 30
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_031438958.1
SIO_010081: ZSCAN30
subclass of: SO_0000673
so part of: ZSCAN30
location: join(7657080..7657211,7662205..7662716,7663158..7663296,7669103..7672091)
location: region:7657080-7672091:1
so has part: feature:7657080-7657211:1:exon
so has part: feature:7662205-7662716:1:exon
so has part: feature:7663158-7663296:1:exon
so has part: feature:7669103-7672091:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7657080-7657211:1:exon

position:7657211:1
position: 7657211
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7662205-7662716:1:exon

position:7662205:1
position: 7662205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7662716:1
position: 7662716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7663158-7663296:1:exon

position:7663158:1
position: 7663158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7663296:1
position: 7663296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7669103-7672091:1:exon

position:7669103:1
position: 7669103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZSCAN30
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ZSCAN30
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger and SCAN domain-containing protein 30
translation: MAGKSAALTYHAPKEQEGLIIVKVEEENYVWGQDFSLQGKACSREAFRQRFRQFSYSDCVGPREALSRLRELCCQWLRPEVHTKEQILDLLVLEQFLASLPEELQAWFQGNRPESGEEAVVMLEELEKELDEPQQQDTAHDQGMIWKEMTSVGALESLSIQLQPLENQRKSKKQEAQAFYERDGKLVADRLLTATQESIECECVASAPMRAPGRLPGEGPSGQVVEEALGGLGNFEKPRGSAAGNRMSQHPSQGRHFSLASFNKKVSTEEPLQGNESEGGLSLNSDVVTQPRIHTAGKLYECFDCGKAFCQSSKLIRHQRIHTGERPYACKECDKAFSLSSDLVRHQRIHSGEKPYECCECGRAFRGSSELIRHRRIHTGEKPYECGECGRAFSRSSALIQHRKIHTGDKGYECIECGKAFGRSSILIEHQRIHTGEKPYECNECGKSFNQSSALTQHQRIHTGEKPYECSECGKTFRHRSGLMQHQRTHTRV
SIO_010081: ZSCAN30
subclass of: SO_0000673
so part of: ZSCAN30
location: join(7662309..7662716,7663158..7663296,7669103..7670037)
location: region:7662309-7670037:1
so has part: feature:7662309-7662716:1:exon
so has part: feature:7663158-7663296:1:exon
so has part: feature:7669103-7670037:1:exon

XP_031294818.1
type: Protein
SIO_000068: ncbiprotein

position:7662309:1
position: 7662309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7670037:1
position: 7670037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7662309-7662716:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7663158-7663296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7669103-7670037:1:exon

LOC105086836
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7673266..7682660)
location: region:7673266-7682660:-1
so has part: feature:7673266-7682660:-1:exon
subclass of: SO_0000010

105086836
type: Gene
SIO_000068: ncbigene

position:7673266:-1
position: 7673266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7682660:-1
position: 7682660
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7673266-7682660:-1:exon

LOC105086836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086836
product: zinc finger protein 397, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 31 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031438957.1
SIO_010081: LOC105086836
subclass of: SO_0000673
so part of: LOC105086836
location: complement(join(7673266..7676730,7680163..7680304,7680666..7681067,7682520..7682660))
location: region:7673266-7682660:-1
so has part: feature:7682520-7682660:-1:exon
so has part: feature:7680666-7681067:-1:exon
so has part: feature:7680163-7680304:-1:exon
so has part: feature:7673266-7676730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7682520-7682660:-1:exon

position:7682520:-1
position: 7682520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7680666-7681067:-1:exon

position:7680666:-1
position: 7680666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7681067:-1
position: 7681067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7680163-7680304:-1:exon

position:7680163:-1
position: 7680163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7680304:-1
position: 7680304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7673266-7676730:-1:exon

position:7676730:-1
position: 7676730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105086836
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: LOC105086836
product: zinc finger protein 397, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 43 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031438955.1
SIO_010081: LOC105086836
subclass of: SO_0000673
so part of: LOC105086836
location: complement(join(7673266..7676730,7680163..7680304,7680573..7681067,7682520..7682660))
location: region:7673266-7682660:-1
so has part: feature:7682520-7682660:-1:exon
so has part: feature:7680573-7681067:-1:exon
so has part: feature:7680163-7680304:-1:exon
so has part: feature:7673266-7676730:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7682520-7682660:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7680573-7681067:-1:exon

position:7680573:-1
position: 7680573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7680163-7680304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7673266-7676730:-1:exon

LOC105086836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 397 isoform X2
translation: MGRGRRGLARACERKAAVAHFRSLWLAAPGPRLAPGPLSSFAERRDYSKKLWSTVPSCSEFFAEPFQPRMAVESRAVSTPVPQNPQEQELILVKVEESLSWGQKLKQNGSTRSCQELFRQQFRKFCYQETPGPREALGRLQELCYQWLMPEVHTKEQILELLVLEQFLSILPEELQVPTSPQGPAVPWKDLTRLGASQELTGIQLQPLKTQLKPWEPCLSPQSDCEIKESVPKKHVPGEKSQRLSQEPAFGGVGEHESSLGWQQASATGERLRRSPSQGGTFNQVIFTHKSLGNRDHHELQRSLILSANSMTYQKVPTEERPHRCEVCGHSFKQHSSLTQHQRIHTGEKPYKCNQCGKAFSLRSYLIIHQRIHSGEKAYECSECGKAFNQSSALIRHRKIHTGEKACKCNECGKAFSQSSYLIIHQRIHTGEKPYECNECGKTFSQSSKLIRHQRIHTGERPYECNECGKAFRQSSELITHQRIHSGEKPYECNECGKAFSLSSNLIRHQRIHSGEEPYQCNECGKTFKRSSALVQHQRIHSGDEAYICNDCGKAFRHRSVLLRHQRVHTVK
SIO_010081: LOC105086836
subclass of: SO_0000673
so part of: LOC105086836
location: complement(join(7675682..7676730,7680163..7680304,7680666..7681067,7682520..7682645))
location: region:7675682-7682645:-1
so has part: feature:7682520-7682645:-1:exon
so has part: feature:7680666-7681067:-1:exon
so has part: feature:7680163-7680304:-1:exon
so has part: feature:7675682-7676730:-1:exon

XP_031294817.1
type: Protein
SIO_000068: ncbiprotein

position:7675682:-1
position: 7675682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7682645:-1
position: 7682645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7682520-7682645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7680666-7681067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7680163-7680304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7675682-7676730:-1:exon

LOC105086836
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: LOC105086836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 397 isoform X1
translation: MGRGRRGLARACERKAAVAHFRSLWLAAPGPRLAPGPLSSFAERRDYSKKLWSTVPSCSEFFAEPFQPRMAVESRAVSTPVPQNPQEQELILVKVEESLSWGQKLKQNGSTRSCQELFRQQFRKFCYQETPGPREALGRLQELCYQWLMPEVHTKEQILELLVLEQFLSILPEELQVWVQQHSPKSGEEAVTLLEDLEREFDDPGQQVPTSPQGPAVPWKDLTRLGASQELTGIQLQPLKTQLKPWEPCLSPQSDCEIKESVPKKHVPGEKSQRLSQEPAFGGVGEHESSLGWQQASATGERLRRSPSQGGTFNQVIFTHKSLGNRDHHELQRSLILSANSMTYQKVPTEERPHRCEVCGHSFKQHSSLTQHQRIHTGEKPYKCNQCGKAFSLRSYLIIHQRIHSGEKAYECSECGKAFNQSSALIRHRKIHTGEKACKCNECGKAFSQSSYLIIHQRIHTGEKPYECNECGKTFSQSSKLIRHQRIHTGERPYECNECGKAFRQSSELITHQRIHSGEKPYECNECGKAFSLSSNLIRHQRIHSGEEPYQCNECGKTFKRSSALVQHQRIHSGDEAYICNDCGKAFRHRSVLLRHQRVHTVK
SIO_010081: LOC105086836
subclass of: SO_0000673
so part of: LOC105086836
location: complement(join(7675682..7676730,7680163..7680304,7680573..7681067,7682520..7682645))
location: region:7675682-7682645:-1
so has part: feature:7682520-7682645:-1:exon
so has part: feature:7680573-7681067:-1:exon
so has part: feature:7680163-7680304:-1:exon
so has part: feature:7675682-7676730:-1:exon

XP_031294815.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7682520-7682645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7680573-7681067:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7680163-7680304:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7675682-7676730:-1:exon

LOC105086778
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105086778
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7682701..7746659
location: region:7682701-7746659:1
so has part: feature:7682701-7746659:1:exon
subclass of: SO_0000011

105086778
type: Gene
SIO_000068: ncbigene

position:7682701:1
position: 7682701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7746659:1
position: 7746659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7682701-7746659:1:exon

LOC105086778
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105086778
product: uncharacterized LOC105086778, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_004132329.1
SIO_010081: LOC105086778
subclass of: SO_0000673
so part of: LOC105086778
location: join(7682701..7682998,7685118..7685197,7737884..7738030,7744854..7745004,7746451..7746659)
location: region:7682701-7746659:1
so has part: feature:7682701-7682998:1:exon
so has part: feature:7685118-7685197:1:exon
so has part: feature:7737884-7738030:1:exon
so has part: feature:7744854-7745004:1:exon
so has part: feature:7746451-7746659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7682701-7682998:1:exon

position:7682998:1
position: 7682998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7685118-7685197:1:exon

position:7685118:1
position: 7685118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7685197:1
position: 7685197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7737884-7738030:1:exon

position:7737884:1
position: 7737884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7738030:1
position: 7738030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7744854-7745004:1:exon

position:7744854:1
position: 7744854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7745004:1
position: 7745004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7746451-7746659:1:exon

position:7746451:1
position: 7746451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105086778
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105086778
product: uncharacterized LOC105086778, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004132330.1
SIO_010081: LOC105086778
subclass of: SO_0000673
so part of: LOC105086778
location: join(7682701..7682998,7685118..7685197,7737884..7738030,7744854..7745004,7746496..7746659)
location: region:7682701-7746659:1
so has part: feature:7682701-7682998:1:exon
so has part: feature:7685118-7685197:1:exon
so has part: feature:7737884-7738030:1:exon
so has part: feature:7744854-7745004:1:exon
so has part: feature:7746496-7746659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7682701-7682998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7685118-7685197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7737884-7738030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7744854-7745004:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7746496-7746659:1:exon

position:7746496:1
position: 7746496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC105086778
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC105086778
product: uncharacterized LOC105086778, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_836955.2
SIO_010081: LOC105086778
subclass of: SO_0000673
so part of: LOC105086778
location: join(7682701..7682998,7685118..7685197,7737884..7738030,7744854..7746022)
location: region:7682701-7746022:1
so has part: feature:7682701-7682998:1:exon
so has part: feature:7685118-7685197:1:exon
so has part: feature:7737884-7738030:1:exon
so has part: feature:7744854-7746022:1:exon

position:7746022:1
position: 7746022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7682701-7682998:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7685118-7685197:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7737884-7738030:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7744854-7746022:1:exon

MAPRE2
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: MAPRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7732445..7871057)
location: region:7732445-7871057:-1
so has part: feature:7732445-7871057:-1:exon
subclass of: SO_0000010

105086786
type: Gene
SIO_000068: ncbigene

position:7732445:-1
position: 7732445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7871057:-1
position: 7871057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7732445-7871057:-1:exon

MAPRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAPRE2
product: microtubule associated protein RP/EB family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_031438965.1
SIO_010081: MAPRE2
subclass of: SO_0000673
so part of: MAPRE2
location: complement(join(7732445..7733885,7740620..7740778,7744810..7744949,7767045..7767258,7769768..7769913,7794067..7794194,7850834..7850895,7870959..7871057))
location: region:7732445-7871057:-1
so has part: feature:7870959-7871057:-1:exon
so has part: feature:7850834-7850895:-1:exon
so has part: feature:7794067-7794194:-1:exon
so has part: feature:7769768-7769913:-1:exon
so has part: feature:7767045-7767258:-1:exon
so has part: feature:7744810-7744949:-1:exon
so has part: feature:7740620-7740778:-1:exon
so has part: feature:7732445-7733885:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7870959-7871057:-1:exon

position:7870959:-1
position: 7870959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7850834-7850895:-1:exon

position:7850834:-1
position: 7850834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7850895:-1
position: 7850895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7794067-7794194:-1:exon

position:7794067:-1
position: 7794067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7794194:-1
position: 7794194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7769768-7769913:-1:exon

position:7769768:-1
position: 7769768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7769913:-1
position: 7769913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7767045-7767258:-1:exon

position:7767045:-1
position: 7767045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7767258:-1
position: 7767258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7744810-7744949:-1:exon

position:7744810:-1
position: 7744810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7744949:-1
position: 7744949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7740620-7740778:-1:exon

position:7740620:-1
position: 7740620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7740778:-1
position: 7740778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7732445-7733885:-1:exon

position:7733885:-1
position: 7733885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MAPRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAPRE2
product: microtubule associated protein RP/EB family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_031438964.1
SIO_010081: MAPRE2
subclass of: SO_0000673
so part of: MAPRE2
location: complement(join(7732445..7733885,7740620..7740778,7744810..7744949,7767045..7767258,7769768..7769913,7794067..7794194,7850834..7850895,7869487..7870318))
location: region:7732445-7870318:-1
so has part: feature:7869487-7870318:-1:exon
so has part: feature:7850834-7850895:-1:exon
so has part: feature:7794067-7794194:-1:exon
so has part: feature:7769768-7769913:-1:exon
so has part: feature:7767045-7767258:-1:exon
so has part: feature:7744810-7744949:-1:exon
so has part: feature:7740620-7740778:-1:exon
so has part: feature:7732445-7733885:-1:exon

position:7870318:-1
position: 7870318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7869487-7870318:-1:exon

position:7869487:-1
position: 7869487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7850834-7850895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7794067-7794194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7769768-7769913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7767045-7767258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7744810-7744949:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7740620-7740778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7732445-7733885:-1:exon

MAPRE2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: MAPRE2
product: microtubule associated protein RP/EB family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XM_031438963.1
SIO_010081: MAPRE2
subclass of: SO_0000673
so part of: MAPRE2
location: complement(join(7732445..7733885,7740620..7740778,7744810..7744949,7767045..7767258,7769768..7769913,7794067..7794194,7822192..7822468))
location: region:7732445-7822468:-1
so has part: feature:7822192-7822468:-1:exon
so has part: feature:7794067-7794194:-1:exon
so has part: feature:7769768-7769913:-1:exon
so has part: feature:7767045-7767258:-1:exon
so has part: feature:7744810-7744949:-1:exon
so has part: feature:7740620-7740778:-1:exon
so has part: feature:7732445-7733885:-1:exon

position:7822468:-1
position: 7822468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7822192-7822468:-1:exon

position:7822192:-1
position: 7822192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7794067-7794194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7769768-7769913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7767045-7767258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7744810-7744949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7740620-7740778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7732445-7733885:-1:exon

MAPRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MAPRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein RP/EB family member 2 isoform X2
translation: MKQNRDQKYPISQRNISSRQPGREPGCSSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAARSSPASKPGSTPSRPSSAKRASSSSSASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMEVLYASEEHEGHPEEPEAEEQVHEQQPQQQEEY
SIO_010081: MAPRE2
subclass of: SO_0000673
so part of: MAPRE2
location: complement(join(7733811..7733885,7740620..7740778,7744810..7744949,7767045..7767258,7769768..7769913,7794067..7794194,7850834..7850895,7869487..7869510))
location: region:7733811-7869510:-1
so has part: feature:7869487-7869510:-1:exon
so has part: feature:7850834-7850895:-1:exon
so has part: feature:7794067-7794194:-1:exon
so has part: feature:7769768-7769913:-1:exon
so has part: feature:7767045-7767258:-1:exon
so has part: feature:7744810-7744949:-1:exon
so has part: feature:7740620-7740778:-1:exon
so has part: feature:7733811-7733885:-1:exon

XP_031294824.1
type: Protein
SIO_000068: ncbiprotein

position:7733811:-1
position: 7733811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7869510:-1
position: 7869510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7869487-7869510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7850834-7850895:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7794067-7794194:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7769768-7769913:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7767045-7767258:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7744810-7744949:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7740620-7740778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7733811-7733885:-1:exon

MAPRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MAPRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein RP/EB family member 2 isoform X1
translation: MPGPTQTLSPNGENNNDIIQDNGTIIPFRKHTVRGERSYSWGMAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAARSSPASKPGSTPSRPSSAKRASSSSSASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMEVLYASEEHEGHPEEPEAEEQVHEQQPQQQEEY
SIO_010081: MAPRE2
subclass of: SO_0000673
so part of: MAPRE2
location: complement(join(7733811..7733885,7740620..7740778,7744810..7744949,7767045..7767258,7769768..7769913,7794067..7794194,7822192..7822310))
location: region:7733811-7822310:-1
so has part: feature:7822192-7822310:-1:exon
so has part: feature:7794067-7794194:-1:exon
so has part: feature:7769768-7769913:-1:exon
so has part: feature:7767045-7767258:-1:exon
so has part: feature:7744810-7744949:-1:exon
so has part: feature:7740620-7740778:-1:exon
so has part: feature:7733811-7733885:-1:exon

XP_031294823.1
type: Protein
SIO_000068: ncbiprotein

position:7822310:-1
position: 7822310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7822192-7822310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7794067-7794194:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7769768-7769913:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7767045-7767258:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7744810-7744949:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7740620-7740778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7733811-7733885:-1:exon

MAPRE2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: MAPRE2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule-associated protein RP/EB family member 2 isoform X3
translation: MAVNVYSTSITQETMSRHDIIAWVNDIVSLNYTKVEQLCSGAAYCQFMDMLFPGCISLKKVKFQAKLEHEYIHNFKLLQASFKRMNVDKVIPVEKLVKGRFQDNLDFIQWFKKFYDANYDGKEYDPVEARQGQDAIPPPDPGEQIFNLPKKSHHANSPTAGAARSSPASKPGSTPSRPSSAKRASSSSSASKSDKDLETQVIQLNEQVHSLKLALEGVEKERDFYFGKLREIELLCQEHGQENDDLVQRLMEVLYASEEHEGHPEEPEAEEQVHEQQPQQQEEY
SIO_010081: MAPRE2
subclass of: SO_0000673
so part of: MAPRE2
location: complement(join(7733811..7733885,7740620..7740778,7744810..7744949,7767045..7767258,7769768..7769913,7794067..7794187))
location: region:7733811-7794187:-1
so has part: feature:7794067-7794187:-1:exon
so has part: feature:7769768-7769913:-1:exon
so has part: feature:7767045-7767258:-1:exon
so has part: feature:7744810-7744949:-1:exon
so has part: feature:7740620-7740778:-1:exon
so has part: feature:7733811-7733885:-1:exon

XP_031294825.1
type: Protein
SIO_000068: ncbiprotein

position:7794187:-1
position: 7794187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7794067-7794187:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7769768-7769913:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7767045-7767258:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7744810-7744949:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7740620-7740778:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7733811-7733885:-1:exon

TRNAG-ACC
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: TRNAG-ACC
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(7857140..7857211)
location: region:7857140-7857211:-1
so has part: feature:7857140-7857211:-1:exon
subclass of: SO_0000663

116148862
type: Gene
SIO_000068: ncbigene

position:7857140:-1
position: 7857140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7857211:-1
position: 7857211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7857140-7857211:-1:exon

TRNAG-ACC
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9838
gene: TRNAG-ACC
product: tRNA-Gly
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA glycine (anticodon ACC); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(7857177..7857179),aa:Gly, seq:acc)
SIO_010081: TRNAG-ACC
subclass of: SO_0000673
so part of: TRNAG-ACC
location: complement(7857140..7857211)
location: region:7857140-7857211:-1
so has part: feature:7857140-7857211:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7857140-7857211:-1:exon

DTNA
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7918965..8212624)
location: region:7918965-8212624:-1
so has part: feature:7918965-8212624:-1:exon
subclass of: SO_0000010

105086767
type: Gene
SIO_000068: ncbigene

position:7918965:-1
position: 7918965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8212624:-1
position: 8212624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7918965-8212624:-1:exon

DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031438973.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7918965..7920064,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031900,8077082..8077211,8139843..8140067))
location: region:7918965-8140067:-1
so has part: feature:8139843-8140067:-1:exon
so has part: feature:8077082-8077211:-1:exon
so has part: feature:8031833-8031900:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7918965-7920064:-1:exon

position:8140067:-1
position: 8140067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8139843-8140067:-1:exon

position:8139843:-1
position: 8139843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8077082-8077211:-1:exon

position:8077082:-1
position: 8077082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8077211:-1
position: 8077211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8031833-8031900:-1:exon

position:8031833:-1
position: 8031833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8031900:-1
position: 8031900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8023366-8023446:-1:exon

position:8023366:-1
position: 8023366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8023446:-1
position: 8023446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8005099-8005312:-1:exon

position:8005099:-1
position: 8005099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8005312:-1
position: 8005312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7995139-7995224:-1:exon

position:7995139:-1
position: 7995139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7995224:-1
position: 7995224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7991208-7991362:-1:exon

position:7991208:-1
position: 7991208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7991362:-1
position: 7991362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7987076-7987181:-1:exon

position:7987076:-1
position: 7987076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7987181:-1
position: 7987181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7984354-7984520:-1:exon

position:7984354:-1
position: 7984354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7984520:-1
position: 7984520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7981802-7981926:-1:exon

position:7981802:-1
position: 7981802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7981926:-1
position: 7981926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7976947-7977030:-1:exon

position:7976947:-1
position: 7976947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7977030:-1
position: 7977030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7967493-7967570:-1:exon

position:7967493:-1
position: 7967493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7967570:-1
position: 7967570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7966811-7966903:-1:exon

position:7966811:-1
position: 7966811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7966903:-1
position: 7966903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7955923-7956010:-1:exon

position:7955923:-1
position: 7955923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7956010:-1
position: 7956010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:7954116-7954213:-1:exon

position:7954116:-1
position: 7954116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7954213:-1
position: 7954213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:7950553-7950666:-1:exon

position:7950553:-1
position: 7950553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7950666:-1
position: 7950666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:7944751-7944847:-1:exon

position:7944751:-1
position: 7944751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7944847:-1
position: 7944847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:7942880-7942900:-1:exon

position:7942880:-1
position: 7942880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7942900:-1
position: 7942900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:7934382-7934541:-1:exon

position:7934382:-1
position: 7934382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7934541:-1
position: 7934541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:7931625-7931714:-1:exon

position:7931625:-1
position: 7931625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7931714:-1
position: 7931714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:7930213-7930381:-1:exon

position:7930213:-1
position: 7930213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7930381:-1
position: 7930381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:7927808-7927940:-1:exon

position:7927808:-1
position: 7927808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7927940:-1
position: 7927940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:7918965-7920064:-1:exon

position:7920064:-1
position: 7920064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_031438981.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7918965..7920064,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031900,8077082..8077211,8139843..8140065))
location: region:7918965-8140065:-1
so has part: feature:8139843-8140065:-1:exon
so has part: feature:8077082-8077211:-1:exon
so has part: feature:8031833-8031900:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7918965-7920064:-1:exon

position:8140065:-1
position: 8140065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8139843-8140065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8077082-8077211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031833-8031900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7918965-7920064:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X10
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQLHVSTETRLKHPCPVNETKWRVLFWVFVLLGGFLSLALQIYLWGLL
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7919924..7920064,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7919924-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7919924-7920064:-1:exon

XP_031294841.1
type: Protein
SIO_000068: ncbiprotein

position:7919924:-1
position: 7919924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8031899:-1
position: 8031899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7919924-7920064:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X4
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQLHVSTETRLKHPCPVNETKWRVLFWVFVLLGGFLSLALQIYLWGLL
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7919924..7920064,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7919924-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7919924-7920064:-1:exon

XP_031294833.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7919924-7920064:-1:exon

DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_031438979.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7919935..7920064,7925693..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031900,8077082..8077211,8139843..8140067))
location: region:7919935-8140067:-1
so has part: feature:8139843-8140067:-1:exon
so has part: feature:8077082-8077211:-1:exon
so has part: feature:8031833-8031900:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
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so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
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so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
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so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925693-7925741:-1:exon
so has part: feature:7919935-7920064:-1:exon

position:7919935:-1
position: 7919935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8139843-8140067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8077082-8077211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031833-8031900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8023366-8023446:-1:exon

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SIO_000300: 5
SIO_000628: feature:8005099-8005312:-1:exon

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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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urn:…
SIO_000300: 11
SIO_000628: feature:7976947-7977030:-1:exon

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SIO_000300: 12
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7955923-7956010:-1:exon

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SIO_000300: 15
SIO_000628: feature:7954116-7954213:-1:exon

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SIO_000300: 16
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urn:…
SIO_000300: 17
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urn:…
SIO_000300: 18
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SIO_000300: 19
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:7925693-7925741:-1:exon

position:7925693:-1
position: 7925693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7925741:-1
position: 7925741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:7919935-7920064:-1:exon

DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438968.1
SIO_010081: DTNA
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DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031438974.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
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DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_031438975.1
SIO_010081: DTNA
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so part of: DTNA
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location: region:7922387-8140067:-1
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DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438970.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
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location: region:7922387-8060380:-1
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DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031438969.1
SIO_010081: DTNA
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location: region:7922387-8035814:-1
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DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X7
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSMLESSNRLDEEHRLIARYAARLAAESTSSPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
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XP_031294837.1
type: Protein
SIO_000068: ncbiprotein

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type: ReverseStrandPosition
type: ExactPosition

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SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X6
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294835.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X2
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954210,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954210:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954210:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X3
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294832.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X1
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X1
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294828.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X1
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X1
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294830.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X5
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRRLPEGVSTSSPVAEEHSLIQLYVSQLDHGARMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQASYSQTDDERDRRAGDEGLSCTHPSQRRRRQPGSSLTSRKRGTTAHSSSRQTPPPHPLNLCSADSSAAHFLF
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922421..7922639,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7975179..7975268,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7922421-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7975179-7975268:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7922421-7922639:-1:exon

XP_031294834.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7975179-7975268:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7922421-7922639:-1:exon

DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031438980.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922501..7922639,7925693..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031900,8077082..8077211,8139843..8140067))
location: region:7922501-8140067:-1
so has part: feature:8139843-8140067:-1:exon
so has part: feature:8077082-8077211:-1:exon
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subclass of: SO_0000673
so part of: DTNA
location: complement(join(7922501..7922639,7925693..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031900,8077082..8077211,8139843..8140065))
location: region:7922501-8140065:-1
so has part: feature:8139843-8140065:-1:exon
so has part: feature:8077082-8077211:-1:exon
so has part: feature:8031833-8031900:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925693-7925741:-1:exon
so has part: feature:7922501-7922639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8139843-8140065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8077082-8077211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031833-8031900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7925693-7925741:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7922501-7922639:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X13
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQVSLQG
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7925724..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7925724-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925724-7925741:-1:exon

XP_031294844.1
type: Protein
SIO_000068: ncbiprotein

position:7925724:-1
position: 7925724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7925724-7925741:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X12
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQVSLQG
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7925724..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7925724-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925724-7925741:-1:exon

XP_031294843.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7925724-7925741:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X9
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQVSLQG
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7925724..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7925724-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925724-7925741:-1:exon

XP_031294840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7925724-7925741:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X8
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQVSLQG
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7925724..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7925724-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925724-7925741:-1:exon

XP_031294838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7925724-7925741:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X8
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQVSLQG
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7925724..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7925724-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925724-7925741:-1:exon

XP_031294839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7925724-7925741:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X11
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRRLPEGVSTSSPVAEEHSLIQLYVSQLDHGARMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQVSLQG
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7925724..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7975179..7975268,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7925724-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7975179-7975268:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925724-7925741:-1:exon

XP_031294842.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7975179-7975268:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7925724-7925741:-1:exon

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X16
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRRLPEGVSTSSPVAEEHSLIQLYVSQLDHGARSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKTQGPGSPRSSPSHTISRPIPTPVRSASACSTPTHAPQDSLTGVGGDVQEAFAQSSRRNLRNDLLVAADSITNTMSSLVKELNSDVRSDTESNVDSEFARTQFEDLVPSPTSEKAFLAQIHARKPGYLHSGATPITMRGDMVTEDGDPYVQPEDENYEDESVRQLENELKMEEYLKQKLQDEAYQVSLQG
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7925724..7925741,7927808..7927940,7930213..7930381,7931625..7931714,7934382..7934541,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7975179..7975268,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7925724-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7975179-7975268:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7934382-7934541:-1:exon
so has part: feature:7931625-7931714:-1:exon
so has part: feature:7930213-7930381:-1:exon
so has part: feature:7927808-7927940:-1:exon
so has part: feature:7925724-7925741:-1:exon

XP_031294848.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7975179-7975268:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7934382-7934541:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7931625-7931714:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7930213-7930381:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:7927808-7927940:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:7925724-7925741:-1:exon

DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_031438985.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7934550..7942125,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031900,8077082..8077211,8139843..8140066))
location: region:7934550-8140066:-1
so has part: feature:8139843-8140066:-1:exon
so has part: feature:8077082-8077211:-1:exon
so has part: feature:8031833-8031900:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7934550-7942125:-1:exon

position:7934550:-1
position: 7934550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8139843-8140066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8077082-8077211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031833-8031900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:7934550-7942125:-1:exon

position:7942125:-1
position: 7942125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X14
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSPPKDSEVEQSKLLARAAPALLKGRGIQYSLSVADRLADEHVLIGLYVSMLRNSPSCMLESSNRLDEEHRLIARYAARLAAESTSSQPAQQRSAPDISFTIDANKQQRQLIAELENKNREILQEIQRLRLEHEQASQPTPEKAQQNPTLLAELRLLRQRKDELEQRMSALQESRRELMVQLEGLMKLLKEEELKQGEPCDSLAVN
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7942096..7942125,7942880..7942900,7944751..7944847,7950553..7950666,7954116..7954213,7955923..7956010,7966811..7966903,7967493..7967570,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7942096-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7967493-7967570:-1:exon
so has part: feature:7966811-7966903:-1:exon
so has part: feature:7955923-7956010:-1:exon
so has part: feature:7954116-7954213:-1:exon
so has part: feature:7950553-7950666:-1:exon
so has part: feature:7944751-7944847:-1:exon
so has part: feature:7942880-7942900:-1:exon
so has part: feature:7942096-7942125:-1:exon

XP_031294845.1
type: Protein
SIO_000068: ncbiprotein

position:7942096:-1
position: 7942096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7967493-7967570:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7966811-7966903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7955923-7956010:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7954116-7954213:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:7950553-7950666:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:7944751-7944847:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:7942880-7942900:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:7942096-7942125:-1:exon

DTNA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: DTNA
product: dystrobrevin alpha, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_031438986.1
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7975345..7975629,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031900,8077082..8077211,8139843..8140061))
location: region:7975345-8140061:-1
so has part: feature:8139843-8140061:-1:exon
so has part: feature:8077082-8077211:-1:exon
so has part: feature:8031833-8031900:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7975345-7975629:-1:exon

position:7975345:-1
position: 7975345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8140061:-1
position: 8140061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8139843-8140061:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8077082-8077211:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8031833-8031900:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7975345-7975629:-1:exon

position:7975629:-1
position: 7975629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DTNA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: DTNA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dystrobrevin alpha isoform X15
translation: MIEDSGKRGNTMAERRQLFAEMRAQDLDRIRLSTYRTACKLRFVQKKCNLHLVDIWNVIEALRENALNNLDPNMELSVARLEAVLSTIFYQLNKRMPTTHQIQVEQSISLLLNFLLAAFDPEGHGKISVFAVKMALATLCGGKIMDKLRYIFSMISDSSGVMVYGRYDQFLREVLKLPTAVFEGPSFGYTEQSARSCFSQQKKVTLNGFLDTLMSDPPPQCLVWLPLLHRLANVENVFHPVECSYCHSESMMGFRYRCQQCHNYQLCQDCFWRGHAGGSHSNQHQMKEYTSWKSPAKKLTNALSKSLSCASSREPLHPMFPDQPEKPLNLAHIVPPRPVTSMNDTLFSHSVPSSGSPFITRSSGGAYGGRV
SIO_010081: DTNA
subclass of: SO_0000673
so part of: DTNA
location: complement(join(7975599..7975629,7976947..7977030,7981802..7981926,7984354..7984520,7987076..7987181,7991208..7991362,7995139..7995224,8005099..8005312,8023366..8023446,8031833..8031899))
location: region:7975599-8031899:-1
so has part: feature:8031833-8031899:-1:exon
so has part: feature:8023366-8023446:-1:exon
so has part: feature:8005099-8005312:-1:exon
so has part: feature:7995139-7995224:-1:exon
so has part: feature:7991208-7991362:-1:exon
so has part: feature:7987076-7987181:-1:exon
so has part: feature:7984354-7984520:-1:exon
so has part: feature:7981802-7981926:-1:exon
so has part: feature:7976947-7977030:-1:exon
so has part: feature:7975599-7975629:-1:exon

XP_031294846.1
type: Protein
SIO_000068: ncbiprotein

position:7975599:-1
position: 7975599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8031833-8031899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8023366-8023446:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8005099-8005312:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7995139-7995224:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7991208-7991362:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7987076-7987181:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7984354-7984520:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7981802-7981926:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7976947-7977030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7975599-7975629:-1:exon

LOC116148782
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148782
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8140208..8169287
location: region:8140208-8169287:1
so has part: feature:8140208-8169287:1:exon
subclass of: SO_0000011

116148782
type: Gene
SIO_000068: ncbigene

position:8140208:1
position: 8140208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8169287:1
position: 8169287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8140208-8169287:1:exon

LOC116148782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148782
product: uncharacterized LOC116148782, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_004132334.1
SIO_010081: LOC116148782
subclass of: SO_0000673
so part of: LOC116148782
location: join(8140208..8140502,8140868..8140943,8165206..8165550,8166331..8169287)
location: region:8140208-8169287:1
so has part: feature:8140208-8140502:1:exon
so has part: feature:8140868-8140943:1:exon
so has part: feature:8165206-8165550:1:exon
so has part: feature:8166331-8169287:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8140208-8140502:1:exon

position:8140502:1
position: 8140502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8140868-8140943:1:exon

position:8140868:1
position: 8140868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8140943:1
position: 8140943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8165206-8165550:1:exon

position:8165206:1
position: 8165206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8165550:1
position: 8165550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8166331-8169287:1:exon

position:8166331:1
position: 8166331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC116148782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148782
product: uncharacterized LOC116148782, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004132335.1
SIO_010081: LOC116148782
subclass of: SO_0000673
so part of: LOC116148782
location: join(8140208..8140502,8140868..8140943,8161648..8161721,8165206..8165743)
location: region:8140208-8165743:1
so has part: feature:8140208-8140502:1:exon
so has part: feature:8140868-8140943:1:exon
so has part: feature:8161648-8161721:1:exon
so has part: feature:8165206-8165743:1:exon

position:8165743:1
position: 8165743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8140208-8140502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8140868-8140943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8161648-8161721:1:exon

position:8161648:1
position: 8161648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8161721:1
position: 8161721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8165206-8165743:1:exon

LOC116148782
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148782
product: uncharacterized LOC116148782, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_004132333.1
SIO_010081: LOC116148782
subclass of: SO_0000673
so part of: LOC116148782
location: join(8140208..8140502,8140868..8140943,8165206..8165743)
location: region:8140208-8165743:1
so has part: feature:8140208-8140502:1:exon
so has part: feature:8140868-8140943:1:exon
so has part: feature:8165206-8165743:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8140208-8140502:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8140868-8140943:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8165206-8165743:1:exon

LOC116148783
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148783
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8213118..8315884
location: region:8213118-8315884:1
so has part: feature:8213118-8315884:1:exon
subclass of: SO_0000011

116148783
type: Gene
SIO_000068: ncbigene

position:8213118:1
position: 8213118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8315884:1
position: 8315884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8213118-8315884:1:exon

LOC116148783
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148783
product: uncharacterized LOC116148783
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004132336.1
SIO_010081: LOC116148783
subclass of: SO_0000673
so part of: LOC116148783
location: join(8213118..8213188,8244648..8244771,8262986..8263195,8313963..8315884)
location: region:8213118-8315884:1
so has part: feature:8213118-8213188:1:exon
so has part: feature:8244648-8244771:1:exon
so has part: feature:8262986-8263195:1:exon
so has part: feature:8313963-8315884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8213118-8213188:1:exon

position:8213188:1
position: 8213188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8244648-8244771:1:exon

position:8244648:1
position: 8244648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8244771:1
position: 8244771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8262986-8263195:1:exon

position:8262986:1
position: 8262986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8263195:1
position: 8263195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8313963-8315884:1:exon

position:8313963:1
position: 8313963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOL4
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: NOL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8335899..8622985
location: region:8335899-8622985:1
so has part: feature:8335899-8622985:1:exon
subclass of: SO_0000010

105086758
type: Gene
SIO_000068: ncbigene

position:8335899:1
position: 8335899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8622985:1
position: 8622985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8335899-8622985:1:exon

NOL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NOL4
product: nucleolar protein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438989.1
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8335899..8337825,8432981..8433130,8449899..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622985)
location: region:8335899-8622985:1
so has part: feature:8335899-8337825:1:exon
so has part: feature:8432981-8433130:1:exon
so has part: feature:8449899-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8335899-8337825:1:exon

position:8337825:1
position: 8337825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8432981-8433130:1:exon

position:8432981:1
position: 8432981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8433130:1
position: 8433130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8449899-8450010:1:exon

position:8449899:1
position: 8449899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8450010:1
position: 8450010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8451056-8451168:1:exon

position:8451056:1
position: 8451056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8451168:1
position: 8451168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8456837-8456969:1:exon

position:8456837:1
position: 8456837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8456969:1
position: 8456969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8516298-8516581:1:exon

position:8516298:1
position: 8516298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8516581:1
position: 8516581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8543256-8543435:1:exon

position:8543256:1
position: 8543256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8543435:1
position: 8543435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8544166-8544357:1:exon

position:8544166:1
position: 8544166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8544357:1
position: 8544357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8558988-8559101:1:exon

position:8558988:1
position: 8558988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8559101:1
position: 8559101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8591908-8592088:1:exon

position:8591908:1
position: 8591908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8592088:1
position: 8592088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8621908-8622985:1:exon

position:8621908:1
position: 8621908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NOL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NOL4
product: nucleolar protein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438990.1
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8335899..8337825,8432981..8433130,8449899..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8558988..8559101,8591908..8592088,8621908..8622985)
location: region:8335899-8622985:1
so has part: feature:8335899-8337825:1:exon
so has part: feature:8432981-8433130:1:exon
so has part: feature:8449899-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8335899-8337825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8432981-8433130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8449899-8450010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8451056-8451168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8456837-8456969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8621908-8622985:1:exon

NOL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NOL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4 isoform X1
translation: MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGCESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGIGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHGQQDDDSAAESFNGNEPLGHSSVASGGTHGREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHSSNGKSKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRMAEDLSLNRGDEDEDDHDDHEDPEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDEAAPADKQCKPEAAQGTYSTSAASGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8337562..8337825,8432981..8433130,8449899..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622101)
location: region:8337562-8622101:1
so has part: feature:8337562-8337825:1:exon
so has part: feature:8432981-8433130:1:exon
so has part: feature:8449899-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622101:1:exon

XP_031294849.1
type: Protein
SIO_000068: ncbiprotein

position:8337562:1
position: 8337562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8622101:1
position: 8622101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8337562-8337825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8432981-8433130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8449899-8450010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8451056-8451168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8456837-8456969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8544166-8544357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8621908-8622101:1:exon

NOL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NOL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4 isoform X2
translation: MESERDMYRQFQDWCLRTYGDSGKTKTVTRKKYERIVQLLNGCESSSTDNAKFKFWVKSKGFQLGQPDEVRGGGGGAKQVLYVPVKTTDGIGVDEKLSLRRVAVVEDFFDIIYSMHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHGQQDDDSAAESFNGNEPLGHSSVASGGTHGREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHSSNGKSKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRMAEDLSLNRGDEDEDDHDDHEDPEKVNETDGVEAERLKAFNSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDEAAPADKQCKPEAAQGTYSTSAASGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8337562..8337825,8432981..8433130,8449899..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8558988..8559101,8591908..8592088,8621908..8622101)
location: region:8337562-8622101:1
so has part: feature:8337562-8337825:1:exon
so has part: feature:8432981-8433130:1:exon
so has part: feature:8449899-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622101:1:exon

XP_031294850.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8337562-8337825:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8432981-8433130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8449899-8450010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8451056-8451168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8456837-8456969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8621908-8622101:1:exon

NOL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NOL4
product: nucleolar protein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_010977342.2
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8338699..8338981,8432981..8433130,8449899..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622985)
location: region:8338699-8622985:1
so has part: feature:8338699-8338981:1:exon
so has part: feature:8432981-8433130:1:exon
so has part: feature:8449899-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622985:1:exon

position:8338699:1
position: 8338699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8338699-8338981:1:exon

position:8338981:1
position: 8338981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8432981-8433130:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8449899-8450010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8451056-8451168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8456837-8456969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8544166-8544357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8621908-8622985:1:exon

NOL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NOL4
product: nucleolar protein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438991.1
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8433053..8433130,8434106..8434146,8449899..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622985)
location: region:8433053-8622985:1
so has part: feature:8433053-8433130:1:exon
so has part: feature:8434106-8434146:1:exon
so has part: feature:8449899-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622985:1:exon

position:8433053:1
position: 8433053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8433053-8433130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8434106-8434146:1:exon

position:8434106:1
position: 8434106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8434146:1
position: 8434146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8449899-8450010:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8451056-8451168:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8456837-8456969:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8544166-8544357:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8621908-8622985:1:exon

NOL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NOL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4 isoform X3
translation: MHVETGPNGEQIRKHAGQKRTYKAISESYAFLPREAVTRFLMSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHGQQDDDSAAESFNGNEPLGHSSVASGGTHGREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHSSNGKSKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRMAEDLSLNRGDEDEDDHDDHEDPEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDEAAPADKQCKPEAAQGTYSTSAASGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8433059..8433130,8449899..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622101)
location: region:8433059-8622101:1
so has part: feature:8433059-8433130:1:exon
so has part: feature:8449899-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622101:1:exon

XP_010975644.2
type: Protein
SIO_000068: ncbiprotein

position:8433059:1
position: 8433059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8433059-8433130:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8449899-8450010:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8451056-8451168:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8456837-8456969:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8544166-8544357:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8621908-8622101:1:exon

NOL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NOL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4 isoform X4
translation: MSCSECQKRMHLNPDGTDHKDNGKPPTLVTSMIDYNMPITMAYMKHMKLQLLNSQQDEDESSIESDEFDMSDSTRMSAVNSDLSSNLEERMQSPQALHGQQDDDSAAESFNGNEPLGHSSVASGGTHGREMGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHSSNGKSKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRMAEDLSLNRGDEDEDDHDDHEDPEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDEAAPADKQCKPEAAQGTYSTSAASGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8449950..8450010,8451056..8451168,8456837..8456969,8516298..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622101)
location: region:8449950-8622101:1
so has part: feature:8449950-8450010:1:exon
so has part: feature:8451056-8451168:1:exon
so has part: feature:8456837-8456969:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622101:1:exon

XP_031294851.1
type: Protein
SIO_000068: ncbiprotein

position:8449950:1
position: 8449950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8449950-8450010:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8451056-8451168:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8456837-8456969:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8544166-8544357:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8621908-8622101:1:exon

NOL4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: NOL4
product: nucleolar protein 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031438992.1
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8491662..8491761,8516298..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622985)
location: region:8491662-8622985:1
so has part: feature:8491662-8491761:1:exon
so has part: feature:8516298-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622985:1:exon

position:8491662:1
position: 8491662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8491662-8491761:1:exon

position:8491761:1
position: 8491761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8516298-8516581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8544166-8544357:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8621908-8622985:1:exon

NOL4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: NOL4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleolar protein 4 isoform X5
translation: MGDSNGDGKTGLEQDEQPLNLSDSPLSAQLTSEYRIDDHSSNGKSKYKNLLISDLKMEREARENGSKSPAHSYSSYDSGKNESVDRMAEDLSLNRGDEDEDDHDDHEDPEKVNETDGVEAERLKAFNMFVRLFVDENLDRMVPISKQPKEKIQAIIDSCRRQFPEYQERARKRIRTYLKSCRRMKRSGFEMSRPIPSHLTSAVAESILASACESESRNAAKRMRLDRQQDEAAPADKQCKPEAAQGTYSTSAASGSQEVLYINGNGTYSYHSYRGLGGGLLNLNDASSSGPTDLSMKRQLATSSGSSSSSSSRPQLSPTEINAVRQLVAGYRESAAFLLRSADELENLILQQN
SIO_010081: NOL4
subclass of: SO_0000673
so part of: NOL4
location: join(8516381..8516581,8543256..8543435,8544166..8544357,8558988..8559101,8591908..8592088,8621908..8622101)
location: region:8516381-8622101:1
so has part: feature:8516381-8516581:1:exon
so has part: feature:8543256-8543435:1:exon
so has part: feature:8544166-8544357:1:exon
so has part: feature:8558988-8559101:1:exon
so has part: feature:8591908-8592088:1:exon
so has part: feature:8621908-8622101:1:exon

XP_031294852.1
type: Protein
SIO_000068: ncbiprotein

position:8516381:1
position: 8516381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8516381-8516581:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8543256-8543435:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8544166-8544357:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8558988-8559101:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8591908-8592088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8621908-8622101:1:exon

ASXL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: ASXL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8692969..8824638)
location: region:8692969-8824638:-1
so has part: feature:8692969-8824638:-1:exon
subclass of: SO_0000010

105086744
type: Gene
SIO_000068: ncbigene

position:8692969:-1
position: 8692969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8824638:-1
position: 8824638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8692969-8824638:-1:exon

ASXL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ASXL3
product: ASXL transcriptional regulator 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031438997.1
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8692969..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787445,8812587..8812589,8822040..8822122,8824146..8824638))
location: region:8692969-8824638:-1
so has part: feature:8824146-8824638:-1:exon
so has part: feature:8822040-8822122:-1:exon
so has part: feature:8812587-8812589:-1:exon
so has part: feature:8787337-8787445:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8692969-8701265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8824146-8824638:-1:exon

position:8824146:-1
position: 8824146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8822040-8822122:-1:exon

position:8822040:-1
position: 8822040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8822122:-1
position: 8822122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8812587-8812589:-1:exon

position:8812587:-1
position: 8812587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8812589:-1
position: 8812589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8787337-8787445:-1:exon

position:8787337:-1
position: 8787337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8787445:-1
position: 8787445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8785986-8786094:-1:exon

position:8785986:-1
position: 8785986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8786094:-1
position: 8786094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8770796-8770917:-1:exon

position:8770796:-1
position: 8770796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8770917:-1
position: 8770917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8762166-8762283:-1:exon

position:8762166:-1
position: 8762166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8762283:-1
position: 8762283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8750863-8751026:-1:exon

position:8750863:-1
position: 8750863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8751026:-1
position: 8751026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8712733-8712829:-1:exon

position:8712733:-1
position: 8712733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8712829:-1
position: 8712829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8709748-8709853:-1:exon

position:8709748:-1
position: 8709748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8709853:-1
position: 8709853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8703930-8705886:-1:exon

position:8703930:-1
position: 8703930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8705886:-1
position: 8705886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8692969-8701265:-1:exon

position:8701265:-1
position: 8701265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASXL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ASXL3
product: ASXL transcriptional regulator 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_031438994.1
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8692969..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8761085..8761204,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787445,8812587..8812589,8822040..8822122,8824146..8824634))
location: region:8692969-8824634:-1
so has part: feature:8824146-8824634:-1:exon
so has part: feature:8822040-8822122:-1:exon
so has part: feature:8812587-8812589:-1:exon
so has part: feature:8787337-8787445:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8761085-8761204:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8692969-8701265:-1:exon

position:8824634:-1
position: 8824634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8824146-8824634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8822040-8822122:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8812587-8812589:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8787337-8787445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8785986-8786094:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8770796-8770917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8762166-8762283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8761085-8761204:-1:exon

position:8761085:-1
position: 8761085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8761204:-1
position: 8761204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8750863-8751026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8712733-8712829:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8709748-8709853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8703930-8705886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8692969-8701265:-1:exon

ASXL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ASXL3
product: ASXL transcriptional regulator 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_031438996.1
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8692969..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8761085..8761204,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787445,8804622..8804624,8804874..8805071,8822040..8822122))
location: region:8692969-8822122:-1
so has part: feature:8822040-8822122:-1:exon
so has part: feature:8804874-8805071:-1:exon
so has part: feature:8804622-8804624:-1:exon
so has part: feature:8787337-8787445:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8761085-8761204:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8692969-8701265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8822040-8822122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8804874-8805071:-1:exon

position:8804874:-1
position: 8804874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8805071:-1
position: 8805071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8804622-8804624:-1:exon

position:8804622:-1
position: 8804622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8804624:-1
position: 8804624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8787337-8787445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8785986-8786094:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8770796-8770917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8762166-8762283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8761085-8761204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8750863-8751026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8712733-8712829:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8709748-8709853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8703930-8705886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8692969-8701265:-1:exon

ASXL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: ASXL3
product: ASXL transcriptional regulator 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_031438995.1
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8692969..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8761085..8761204,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787445,8804622..8804624,8804874..8805082,8822040..8822122))
location: region:8692969-8822122:-1
so has part: feature:8822040-8822122:-1:exon
so has part: feature:8804874-8805082:-1:exon
so has part: feature:8804622-8804624:-1:exon
so has part: feature:8787337-8787445:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8761085-8761204:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8692969-8701265:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8822040-8822122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8804874-8805082:-1:exon

position:8805082:-1
position: 8805082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8804622-8804624:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8787337-8787445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8785986-8786094:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8770796-8770917:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8762166-8762283:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8761085-8761204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8750863-8751026:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8712733-8712829:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8709748-8709853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8703930-8705886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8692969-8701265:-1:exon

ASXL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ASXL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative Polycomb group protein ASXL3 isoform X3
translation: MTAKQILEVIQKEGLKETRNGTSPLACLNAMLHTNTRIGDGTFFKIPGKSGLYALKKEESSCPADGTLDLGCESELDGTEMAEANANVEGNGVCAKQVTDEASSTRDSSLTNTAVQSKLVSSFQQHTKKALKQALRQQQKRRNGVSMMVNKTVPRVVLTPLKVSDEQSDSPSGHLKWTKAEDIDIETPGSILVNTNLRALINKHTFASLPQHFQQYLLLLLPEVDRQMGSDGILRLSTSALNNEFFAYAAQGWKQRLAEGEFTPEMQLRIRQEIEKEKKTEPWKEKFFERFYGEKLGMSREESVKLTSGPNSDGAESSSPCGTSGLPALPAQMPLKEQHPKSRKSPASPEPDFCATLCPMVDVGKDVMTESESEDILIPEESVIQEEIAEEVETSICECQDENHKTIAEFSEESASPANSHEEPPIAPPEDHLESCVIMNDVLETLPHIEVKVEEKAESPQEEMSVVIDHLEVCDSLVPSASPGTRVSDTEHKEPETALETNTPKIKTGSSSLEGQFPSEGAAVDMELQSEPDEQLSENACVSETSFSSESPEGAGTSLTSPGGETQSTSEESCTPASLETTFCSEVSSTENTDRYTQRNPTDENLHSSLMSEISPVSTSPEISEASLMSNLPLTSEASPVSNLPLTSETSPMSDLPLTSEPSSVSSMLLTSEATFISSLPLPSETSPISNSSMNERMAHQQRKPTSVPEEPLSPQKDEGSTPAKPLGENLISQQKTLSNTPEPIKMGPSSITPEAFSSEELHSKTLNPQPCKSHAETEKSCPTSIPELPSTEVIKVKNHNILQRTEKKGMSSPLELPVFPEESESKGNELPSAKLQDKQYVSSADKSSFSEGSRNKMHKQGSSQTRLETSHTSKLSEPSRSPDGVRNESRESEISKRKTAEQHSFGTCKEKRARIEGAPSTRNFLSSSPPEKEQPPREEPRVPPLKIQLSKIGPPFIIKSQPVSKPESRASPSTSVSGGRNMGARTLADIKARAQQARAQREAAAAAAVAAAASIVSGAMGSPGESGKARTLAHIKEQTKAKLFAKHQARAHLFQNTKESRLPPLGSKEGPPSLEVSCTPETKIEGSPGVIIVNPNCRSPSNKSAHLRETPTLLQPSLNPTKLPETATDLSVHSSDENRPMSHLSEKIVSSTSSENSSVPMLFNKNSVPVSVCSTAVSGAIKEHPFVSSVDKSSVLMSVDSANTTISACNISMLKTIQGADTPCIAIIPKCIDSAPLPAITEGCSPSSPMDDKQVLMPSSSAGNVVSGQYTPVPTPSIGSNLPNHLSTSSVLVPPTGVNNRFPSEKIAIPGGEEQATVSMGTTVRAGLGCRDPVAATDALVARPPVAVFTGSMLTINSYESSPNLSAESLDKNSGTRNRADTSGKPQPPPGGFAPAAINRSIPCKVIVDHSTTLTSTLSLTVSIESANASLDLQSRSGRTEAAIQPIQPVACPQVSVISRPEQVANEGDHGSSFLAAPAGKQDGKTMPATCPSLREVPLVVPDKLSEVTPPSNSFAEQARGSAAFKSEADPTCSNQYNPGSRICWSEDGMRSSGQPLLGHAGSSKQKEYLEQSCPKAIKTEHASYSHVPELHPRNLITNVTLPVKSEPHDVDKGFRMDTEDFPGPELPAPPAADAAPSVPQTQTTKATSSNPMEEAISLAPDTLKRVPSTGSSSCRLSSVEANNPLVTQLLQGNLPLEKVLPQPRLGAKLEINRLPLPLQTTSVGKTAPDRNVVEMRPSSPNPDGKGYLAGALAPLQMRKRENHPKKRVARTVGEHTQVKCEPGKLLGDPDVKGVPCVISSSVSQLGHGQPLKQEWLNKHSLQNRVVHSPEVKQQKRLLPSCSFQQNLFHVDKNGGFHPDTGTSHRQQFYQMPLAARGPIPPTALLQASAKTPVGCNAFAFNRHLEQKGLGEVGLASAPHQLRLANMLSPSVPVKESDDGRGTVHAMPHKALVHPPPPQPPPPPPLACPRLPHPPPPLPPPLPNAEVPSDQKQPPVTME…
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8697546..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787445,8812587..8812589,8822040..8822095))
location: region:8697546-8822095:-1
so has part: feature:8822040-8822095:-1:exon
so has part: feature:8812587-8812589:-1:exon
so has part: feature:8787337-8787445:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8697546-8701265:-1:exon

XP_031294857.1
type: Protein
SIO_000068: ncbiprotein

position:8697546:-1
position: 8697546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8822095:-1
position: 8822095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8822040-8822095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8812587-8812589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8787337-8787445:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8785986-8786094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8770796-8770917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8762166-8762283:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8750863-8751026:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8712733-8712829:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8709748-8709853:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8703930-8705886:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8697546-8701265:-1:exon

ASXL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ASXL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative Polycomb group protein ASXL3 isoform X1
translation: MTAKQILEVIQKEGLKETRNGTSPLACLNAMLHTNTRIGDGTFFKIPGKSGLYALKKEESSCPADGTLDLGCESELDGTEMAEANANVEGNGVCAKQVTDEASSTRDSSLTNTAVQSKLVSSFQQHTKKALKQALRQQQKRRNGVSMMVNKTVPRVVLTPLKVSDEQSDSPSGSESKNGEADSSDKEMKHGQKSPTGKQTSQHLKRLKKSGLGHLKWTKAEDIDIETPGSILVNTNLRALINKHTFASLPQHFQQYLLLLLPEVDRQMGSDGILRLSTSALNNEFFAYAAQGWKQRLAEGEFTPEMQLRIRQEIEKEKKTEPWKEKFFERFYGEKLGMSREESVKLTSGPNSDGAESSSPCGTSGLPALPAQMPLKEQHPKSRKSPASPEPDFCATLCPMVDVGKDVMTESESEDILIPEESVIQEEIAEEVETSICECQDENHKTIAEFSEESASPANSHEEPPIAPPEDHLESCVIMNDVLETLPHIEVKVEEKAESPQEEMSVVIDHLEVCDSLVPSASPGTRVSDTEHKEPETALETNTPKIKTGSSSLEGQFPSEGAAVDMELQSEPDEQLSENACVSETSFSSESPEGAGTSLTSPGGETQSTSEESCTPASLETTFCSEVSSTENTDRYTQRNPTDENLHSSLMSEISPVSTSPEISEASLMSNLPLTSEASPVSNLPLTSETSPMSDLPLTSEPSSVSSMLLTSEATFISSLPLPSETSPISNSSMNERMAHQQRKPTSVPEEPLSPQKDEGSTPAKPLGENLISQQKTLSNTPEPIKMGPSSITPEAFSSEELHSKTLNPQPCKSHAETEKSCPTSIPELPSTEVIKVKNHNILQRTEKKGMSSPLELPVFPEESESKGNELPSAKLQDKQYVSSADKSSFSEGSRNKMHKQGSSQTRLETSHTSKLSEPSRSPDGVRNESRESEISKRKTAEQHSFGTCKEKRARIEGAPSTRNFLSSSPPEKEQPPREEPRVPPLKIQLSKIGPPFIIKSQPVSKPESRASPSTSVSGGRNMGARTLADIKARAQQARAQREAAAAAAVAAAASIVSGAMGSPGESGKARTLAHIKEQTKAKLFAKHQARAHLFQNTKESRLPPLGSKEGPPSLEVSCTPETKIEGSPGVIIVNPNCRSPSNKSAHLRETPTLLQPSLNPTKLPETATDLSVHSSDENRPMSHLSEKIVSSTSSENSSVPMLFNKNSVPVSVCSTAVSGAIKEHPFVSSVDKSSVLMSVDSANTTISACNISMLKTIQGADTPCIAIIPKCIDSAPLPAITEGCSPSSPMDDKQVLMPSSSAGNVVSGQYTPVPTPSIGSNLPNHLSTSSVLVPPTGVNNRFPSEKIAIPGGEEQATVSMGTTVRAGLGCRDPVAATDALVARPPVAVFTGSMLTINSYESSPNLSAESLDKNSGTRNRADTSGKPQPPPGGFAPAAINRSIPCKVIVDHSTTLTSTLSLTVSIESANASLDLQSRSGRTEAAIQPIQPVACPQVSVISRPEQVANEGDHGSSFLAAPAGKQDGKTMPATCPSLREVPLVVPDKLSEVTPPSNSFAEQARGSAAFKSEADPTCSNQYNPGSRICWSEDGMRSSGQPLLGHAGSSKQKEYLEQSCPKAIKTEHASYSHVPELHPRNLITNVTLPVKSEPHDVDKGFRMDTEDFPGPELPAPPAADAAPSVPQTQTTKATSSNPMEEAISLAPDTLKRVPSTGSSSCRLSSVEANNPLVTQLLQGNLPLEKVLPQPRLGAKLEINRLPLPLQTTSVGKTAPDRNVVEMRPSSPNPDGKGYLAGALAPLQMRKRENHPKKRVARTVGEHTQVKCEPGKLLGDPDVKGVPCVISSSVSQLGHGQPLKQEWLNKHSLQNRVVHSPEVKQQKRLLPSCSFQQNLFHVDKNGGFHPDTGTSHRQQFYQMPLAARGPIPPTALLQASAKTPVGCNAFAFNRHLEQKGLGEVGLASAPHQLRLANMLSPSVPVKESDDGRGTVHAMPHKALVHPPPPQ…
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8697546..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8761085..8761204,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787445,8812587..8812589,8822040..8822095))
location: region:8697546-8822095:-1
so has part: feature:8822040-8822095:-1:exon
so has part: feature:8812587-8812589:-1:exon
so has part: feature:8787337-8787445:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8761085-8761204:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8697546-8701265:-1:exon

XP_031294854.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8822040-8822095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8812587-8812589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8787337-8787445:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8785986-8786094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8770796-8770917:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8762166-8762283:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8761085-8761204:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8750863-8751026:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8712733-8712829:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8709748-8709853:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8703930-8705886:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8697546-8701265:-1:exon

ASXL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ASXL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative Polycomb group protein ASXL3 isoform X2
translation: MLHTNTRIGDGTFFKIPGKSGLYALKKEESSCPADGTLDLGCESELDGTEMAEANANVEGNGVCAKQVTDEASSTRDSSLTNTAVQSKLVSSFQQHTKKALKQALRQQQKRRNGVSMMVNKTVPRVVLTPLKVSDEQSDSPSGSESKNGEADSSDKEMKHGQKSPTGKQTSQHLKRLKKSGLGHLKWTKAEDIDIETPGSILVNTNLRALINKHTFASLPQHFQQYLLLLLPEVDRQMGSDGILRLSTSALNNEFFAYAAQGWKQRLAEGEFTPEMQLRIRQEIEKEKKTEPWKEKFFERFYGEKLGMSREESVKLTSGPNSDGAESSSPCGTSGLPALPAQMPLKEQHPKSRKSPASPEPDFCATLCPMVDVGKDVMTESESEDILIPEESVIQEEIAEEVETSICECQDENHKTIAEFSEESASPANSHEEPPIAPPEDHLESCVIMNDVLETLPHIEVKVEEKAESPQEEMSVVIDHLEVCDSLVPSASPGTRVSDTEHKEPETALETNTPKIKTGSSSLEGQFPSEGAAVDMELQSEPDEQLSENACVSETSFSSESPEGAGTSLTSPGGETQSTSEESCTPASLETTFCSEVSSTENTDRYTQRNPTDENLHSSLMSEISPVSTSPEISEASLMSNLPLTSEASPVSNLPLTSETSPMSDLPLTSEPSSVSSMLLTSEATFISSLPLPSETSPISNSSMNERMAHQQRKPTSVPEEPLSPQKDEGSTPAKPLGENLISQQKTLSNTPEPIKMGPSSITPEAFSSEELHSKTLNPQPCKSHAETEKSCPTSIPELPSTEVIKVKNHNILQRTEKKGMSSPLELPVFPEESESKGNELPSAKLQDKQYVSSADKSSFSEGSRNKMHKQGSSQTRLETSHTSKLSEPSRSPDGVRNESRESEISKRKTAEQHSFGTCKEKRARIEGAPSTRNFLSSSPPEKEQPPREEPRVPPLKIQLSKIGPPFIIKSQPVSKPESRASPSTSVSGGRNMGARTLADIKARAQQARAQREAAAAAAVAAAASIVSGAMGSPGESGKARTLAHIKEQTKAKLFAKHQARAHLFQNTKESRLPPLGSKEGPPSLEVSCTPETKIEGSPGVIIVNPNCRSPSNKSAHLRETPTLLQPSLNPTKLPETATDLSVHSSDENRPMSHLSEKIVSSTSSENSSVPMLFNKNSVPVSVCSTAVSGAIKEHPFVSSVDKSSVLMSVDSANTTISACNISMLKTIQGADTPCIAIIPKCIDSAPLPAITEGCSPSSPMDDKQVLMPSSSAGNVVSGQYTPVPTPSIGSNLPNHLSTSSVLVPPTGVNNRFPSEKIAIPGGEEQATVSMGTTVRAGLGCRDPVAATDALVARPPVAVFTGSMLTINSYESSPNLSAESLDKNSGTRNRADTSGKPQPPPGGFAPAAINRSIPCKVIVDHSTTLTSTLSLTVSIESANASLDLQSRSGRTEAAIQPIQPVACPQVSVISRPEQVANEGDHGSSFLAAPAGKQDGKTMPATCPSLREVPLVVPDKLSEVTPPSNSFAEQARGSAAFKSEADPTCSNQYNPGSRICWSEDGMRSSGQPLLGHAGSSKQKEYLEQSCPKAIKTEHASYSHVPELHPRNLITNVTLPVKSEPHDVDKGFRMDTEDFPGPELPAPPAADAAPSVPQTQTTKATSSNPMEEAISLAPDTLKRVPSTGSSSCRLSSVEANNPLVTQLLQGNLPLEKVLPQPRLGAKLEINRLPLPLQTTSVGKTAPDRNVVEMRPSSPNPDGKGYLAGALAPLQMRKRENHPKKRVARTVGEHTQVKCEPGKLLGDPDVKGVPCVISSSVSQLGHGQPLKQEWLNKHSLQNRVVHSPEVKQQKRLLPSCSFQQNLFHVDKNGGFHPDTGTSHRQQFYQMPLAARGPIPPTALLQASAKTPVGCNAFAFNRHLEQKGLGEVGLASAPHQLRLANMLSPSVPVKESDDGRGTVHAMPHKALVHPPPPQPPPPPPLACPRLPHPPPPLPPPLPNAEVPS…
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8697546..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8761085..8761204,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787414))
location: region:8697546-8787414:-1
so has part: feature:8787337-8787414:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8761085-8761204:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8697546-8701265:-1:exon

XP_031294855.1
type: Protein
SIO_000068: ncbiprotein

position:8787414:-1
position: 8787414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8787337-8787414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8785986-8786094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8770796-8770917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8762166-8762283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8761085-8761204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8750863-8751026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8712733-8712829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8709748-8709853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8703930-8705886:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8697546-8701265:-1:exon

ASXL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: ASXL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative Polycomb group protein ASXL3 isoform X2
translation: MLHTNTRIGDGTFFKIPGKSGLYALKKEESSCPADGTLDLGCESELDGTEMAEANANVEGNGVCAKQVTDEASSTRDSSLTNTAVQSKLVSSFQQHTKKALKQALRQQQKRRNGVSMMVNKTVPRVVLTPLKVSDEQSDSPSGSESKNGEADSSDKEMKHGQKSPTGKQTSQHLKRLKKSGLGHLKWTKAEDIDIETPGSILVNTNLRALINKHTFASLPQHFQQYLLLLLPEVDRQMGSDGILRLSTSALNNEFFAYAAQGWKQRLAEGEFTPEMQLRIRQEIEKEKKTEPWKEKFFERFYGEKLGMSREESVKLTSGPNSDGAESSSPCGTSGLPALPAQMPLKEQHPKSRKSPASPEPDFCATLCPMVDVGKDVMTESESEDILIPEESVIQEEIAEEVETSICECQDENHKTIAEFSEESASPANSHEEPPIAPPEDHLESCVIMNDVLETLPHIEVKVEEKAESPQEEMSVVIDHLEVCDSLVPSASPGTRVSDTEHKEPETALETNTPKIKTGSSSLEGQFPSEGAAVDMELQSEPDEQLSENACVSETSFSSESPEGAGTSLTSPGGETQSTSEESCTPASLETTFCSEVSSTENTDRYTQRNPTDENLHSSLMSEISPVSTSPEISEASLMSNLPLTSEASPVSNLPLTSETSPMSDLPLTSEPSSVSSMLLTSEATFISSLPLPSETSPISNSSMNERMAHQQRKPTSVPEEPLSPQKDEGSTPAKPLGENLISQQKTLSNTPEPIKMGPSSITPEAFSSEELHSKTLNPQPCKSHAETEKSCPTSIPELPSTEVIKVKNHNILQRTEKKGMSSPLELPVFPEESESKGNELPSAKLQDKQYVSSADKSSFSEGSRNKMHKQGSSQTRLETSHTSKLSEPSRSPDGVRNESRESEISKRKTAEQHSFGTCKEKRARIEGAPSTRNFLSSSPPEKEQPPREEPRVPPLKIQLSKIGPPFIIKSQPVSKPESRASPSTSVSGGRNMGARTLADIKARAQQARAQREAAAAAAVAAAASIVSGAMGSPGESGKARTLAHIKEQTKAKLFAKHQARAHLFQNTKESRLPPLGSKEGPPSLEVSCTPETKIEGSPGVIIVNPNCRSPSNKSAHLRETPTLLQPSLNPTKLPETATDLSVHSSDENRPMSHLSEKIVSSTSSENSSVPMLFNKNSVPVSVCSTAVSGAIKEHPFVSSVDKSSVLMSVDSANTTISACNISMLKTIQGADTPCIAIIPKCIDSAPLPAITEGCSPSSPMDDKQVLMPSSSAGNVVSGQYTPVPTPSIGSNLPNHLSTSSVLVPPTGVNNRFPSEKIAIPGGEEQATVSMGTTVRAGLGCRDPVAATDALVARPPVAVFTGSMLTINSYESSPNLSAESLDKNSGTRNRADTSGKPQPPPGGFAPAAINRSIPCKVIVDHSTTLTSTLSLTVSIESANASLDLQSRSGRTEAAIQPIQPVACPQVSVISRPEQVANEGDHGSSFLAAPAGKQDGKTMPATCPSLREVPLVVPDKLSEVTPPSNSFAEQARGSAAFKSEADPTCSNQYNPGSRICWSEDGMRSSGQPLLGHAGSSKQKEYLEQSCPKAIKTEHASYSHVPELHPRNLITNVTLPVKSEPHDVDKGFRMDTEDFPGPELPAPPAADAAPSVPQTQTTKATSSNPMEEAISLAPDTLKRVPSTGSSSCRLSSVEANNPLVTQLLQGNLPLEKVLPQPRLGAKLEINRLPLPLQTTSVGKTAPDRNVVEMRPSSPNPDGKGYLAGALAPLQMRKRENHPKKRVARTVGEHTQVKCEPGKLLGDPDVKGVPCVISSSVSQLGHGQPLKQEWLNKHSLQNRVVHSPEVKQQKRLLPSCSFQQNLFHVDKNGGFHPDTGTSHRQQFYQMPLAARGPIPPTALLQASAKTPVGCNAFAFNRHLEQKGLGEVGLASAPHQLRLANMLSPSVPVKESDDGRGTVHAMPHKALVHPPPPQPPPPPPLACPRLPHPPPPLPPPLPNAEVPS…
SIO_010081: ASXL3
subclass of: SO_0000673
so part of: ASXL3
location: complement(join(8697546..8701265,8703930..8705886,8709748..8709853,8712733..8712829,8750863..8751026,8761085..8761204,8762166..8762283,8770796..8770917,8785986..8786094,8787337..8787414))
location: region:8697546-8787414:-1
so has part: feature:8787337-8787414:-1:exon
so has part: feature:8785986-8786094:-1:exon
so has part: feature:8770796-8770917:-1:exon
so has part: feature:8762166-8762283:-1:exon
so has part: feature:8761085-8761204:-1:exon
so has part: feature:8750863-8751026:-1:exon
so has part: feature:8712733-8712829:-1:exon
so has part: feature:8709748-8709853:-1:exon
so has part: feature:8703930-8705886:-1:exon
so has part: feature:8697546-8701265:-1:exon

XP_031294856.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8787337-8787414:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8785986-8786094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8770796-8770917:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8762166-8762283:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8761085-8761204:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8750863-8751026:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8712733-8712829:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8709748-8709853:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8703930-8705886:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8697546-8701265:-1:exon

LOC116148829
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC116148829
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8862932..8881760)
location: region:8862932-8881760:-1
so has part: feature:8862932-8881760:-1:exon
subclass of: SO_0000011

116148829
type: Gene
SIO_000068: ncbigene

position:8862932:-1
position: 8862932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8881760:-1
position: 8881760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8862932-8881760:-1:exon

LOC116148829
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9838
nc RNA class: lncRNA
gene: LOC116148829
product: uncharacterized LOC116148829
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_004132428.1
SIO_010081: LOC116148829
subclass of: SO_0000673
so part of: LOC116148829
location: complement(join(8862932..8863007,8864232..8864238,8881559..8881561,8881750..8881760))
location: region:8862932-8881760:-1
so has part: feature:8881750-8881760:-1:exon
so has part: feature:8881559-8881561:-1:exon
so has part: feature:8864232-8864238:-1:exon
so has part: feature:8862932-8863007:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8881750-8881760:-1:exon

position:8881750:-1
position: 8881750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8881559-8881561:-1:exon

position:8881559:-1
position: 8881559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8881561:-1
position: 8881561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8864232-8864238:-1:exon

position:8864232:-1
position: 8864232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8864238:-1
position: 8864238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8862932-8863007:-1:exon

position:8863007:-1
position: 8863007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105087064
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: LOC105087064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9018118..9018819
location: region:9018118-9018819:1
so has part: feature:9018118-9018819:1:exon

105087064
type: Gene
SIO_000068: ncbigene

position:9018118:1
position: 9018118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9018819:1
position: 9018819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9018118-9018819:1:exon

LOC105087064
type: Exon
subclass of: SO_0000147
RO_0002162: 9838
gene: LOC105087064
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC105087064
subclass of: SO_0000673
so part of: LOC105087064
location: 9018118..9018819
location: region:9018118-9018819:1
so has part: feature:9018118-9018819:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9018118-9018819:1:exon

CCDC178
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: CCDC178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9023265..9287529
location: region:9023265-9287529:1
so has part: feature:9023265-9287529:1:exon
subclass of: SO_0000010

105087055
type: Gene
SIO_000068: ncbigene

position:9023265:1
position: 9023265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9287529:1
position: 9287529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9023265-9287529:1:exon

CCDC178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: CCDC178
product: coiled-coil domain containing 178
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_031438906.1
SIO_010081: CCDC178
subclass of: SO_0000673
so part of: CCDC178
location: join(9023265..9023313,9027338..9027427,9035551..9035690,9042887..9042909,9047451..9047533,9049864..9050064,9055408..9055628,9057452..9057594,9060913..9061066,9071392..9071487,9071639..9071775,9087991..9088174,9097981..9098043,9099174..9099335,9100968..9101081,9102349..9102494,9105460..9105619,9191553..9191702,9247815..9247892,9256631..9256765,9286673..9287529)
location: region:9023265-9287529:1
so has part: feature:9023265-9023313:1:exon
so has part: feature:9027338-9027427:1:exon
so has part: feature:9035551-9035690:1:exon
so has part: feature:9042887-9042909:1:exon
so has part: feature:9047451-9047533:1:exon
so has part: feature:9049864-9050064:1:exon
so has part: feature:9055408-9055628:1:exon
so has part: feature:9057452-9057594:1:exon
so has part: feature:9060913-9061066:1:exon
so has part: feature:9071392-9071487:1:exon
so has part: feature:9071639-9071775:1:exon
so has part: feature:9087991-9088174:1:exon
so has part: feature:9097981-9098043:1:exon
so has part: feature:9099174-9099335:1:exon
so has part: feature:9100968-9101081:1:exon
so has part: feature:9102349-9102494:1:exon
so has part: feature:9105460-9105619:1:exon
so has part: feature:9191553-9191702:1:exon
so has part: feature:9247815-9247892:1:exon
so has part: feature:9256631-9256765:1:exon
so has part: feature:9286673-9287529:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9023265-9023313:1:exon

position:9023313:1
position: 9023313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9027338-9027427:1:exon

position:9027338:1
position: 9027338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9027427:1
position: 9027427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9035551-9035690:1:exon

position:9035551:1
position: 9035551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9035690:1
position: 9035690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9042887-9042909:1:exon

position:9042887:1
position: 9042887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9042909:1
position: 9042909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9047451-9047533:1:exon

position:9047451:1
position: 9047451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9047533:1
position: 9047533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9049864-9050064:1:exon

position:9049864:1
position: 9049864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9050064:1
position: 9050064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9055408-9055628:1:exon

position:9055408:1
position: 9055408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9055628:1
position: 9055628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9057452-9057594:1:exon

position:9057452:1
position: 9057452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9057594:1
position: 9057594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9060913-9061066:1:exon

position:9060913:1
position: 9060913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9061066:1
position: 9061066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9071392-9071487:1:exon

position:9071392:1
position: 9071392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9071487:1
position: 9071487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9071639-9071775:1:exon

position:9071639:1
position: 9071639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9071775:1
position: 9071775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9087991-9088174:1:exon

position:9087991:1
position: 9087991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9088174:1
position: 9088174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9097981-9098043:1:exon

position:9097981:1
position: 9097981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9098043:1
position: 9098043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9099174-9099335:1:exon

position:9099174:1
position: 9099174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9099335:1
position: 9099335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9100968-9101081:1:exon

position:9100968:1
position: 9100968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9101081:1
position: 9101081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9102349-9102494:1:exon

position:9102349:1
position: 9102349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9102494:1
position: 9102494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9105460-9105619:1:exon

position:9105460:1
position: 9105460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9105619:1
position: 9105619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9191553-9191702:1:exon

position:9191553:1
position: 9191553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9191702:1
position: 9191702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9247815-9247892:1:exon

position:9247815:1
position: 9247815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9247892:1
position: 9247892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:9256631-9256765:1:exon

position:9256631:1
position: 9256631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9256765:1
position: 9256765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9286673-9287529:1:exon

position:9286673:1
position: 9286673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CCDC178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9838
gene: CCDC178
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:9247863..9247865,aa:OTHER)
product: LOW QUALITY PROTEIN: coiled-coil domain-containing protein 178
translation: MVEAITSSWTYTLIILDNATSQALVRFGAPKEAVEVSQENKMTNTEGVNKGIYFGYPCRRQSCALVNIPAPCINKIISHIEDVESKIQEHLRQFETSLEEWNSTSSTKDLKEDQSVATVVKEVKPELRDEKCPELKQEMETLLSEAIYLIKSLETDRAEAEEALKQQKSRRKNINMQIDSWSIWKLQEIPLAVQKEHEAYLRDIIELRWHLESETHQVKCLEEQKAKLEEANTKLQEDVDYMNKYRPLLLSKRDYELEALREFYQKKFEAMELYRQVHGELEETIENLKKAKLNAKQIREDMEKDIIKDKISIEGYRRELDRLNGLYNLYCTSIQDVNVNVEENEEIVTEVLRETRSSKKQLATLSKKLDDFKKTFDQLFWKKKIYEIEYTDALNNFYSTKRTWDVELSNIAKDFSDVSIAYSQLMEENRRIGMDIETIVGYANDSIRKKSEFETEIQSLLKMRSKNEDFLKQLYKDTYNIGAIFHLTRFKTEEVEQKITEVRRKFKGREDFLKKITRGRVANGMIIQKRLFSLQEEQALEREELTRKKAIYNLALAEMEIPLLKLEEDAMKIRAVYKEQSEILGDVIERKNHAKKNVEKTKKKLRRRGKRAQDALIETENKRSVIFEEMETTKSKTIIYHTKINQLSKELEEKQKEKDMFDQILDHLKDQFITMRYKKEHAQAVFDHLVSEKKACEERLCEEEQRYITLFSIRQRTLANIKKIQEDSLEENLRLAQEYQQLQTIFLTEKDNYLNLYDRQLSLDSSVRDKKQAAGFSPMKSPSSLAATXDELSDFQIPFCQLQRRIHKVWQKHFELVVLYSQMRLAKFQIDSQESIQKILAVQEESSTLMQHILDFFQTLTDGPCENDG
SIO_010081: CCDC178
subclass of: SO_0000673
so part of: CCDC178
location: join(9023265..9023313,9027338..9027427,9035551..9035690,9042887..9042909,9047451..9047533,9049864..9050064,9055408..9055628,9057452..9057594,9060913..9061066,9071392..9071487,9071639..9071775,9087991..9088174,9097981..9098043,9099174..9099335,9100968..9101081,9102349..9102494,9105460..9105619,9191553..9191702,9247815..9247892,9256631..9256765,9286673..9286753)
location: region:9023265-9286753:1
so has part: feature:9023265-9023313:1:exon
so has part: feature:9027338-9027427:1:exon
so has part: feature:9035551-9035690:1:exon
so has part: feature:9042887-9042909:1:exon
so has part: feature:9047451-9047533:1:exon
so has part: feature:9049864-9050064:1:exon
so has part: feature:9055408-9055628:1:exon
so has part: feature:9057452-9057594:1:exon
so has part: feature:9060913-9061066:1:exon
so has part: feature:9071392-9071487:1:exon
so has part: feature:9071639-9071775:1:exon
so has part: feature:9087991-9088174:1:exon
so has part: feature:9097981-9098043:1:exon
so has part: feature:9099174-9099335:1:exon
so has part: feature:9100968-9101081:1:exon
so has part: feature:9102349-9102494:1:exon
so has part: feature:9105460-9105619:1:exon
so has part: feature:9191553-9191702:1:exon
so has part: feature:9247815-9247892:1:exon
so has part: feature:9256631-9256765:1:exon
so has part: feature:9286673-9286753:1:exon

XP_031294766.1
type: Protein
SIO_000068: ncbiprotein

position:9286753:1
position: 9286753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9023265-9023313:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9027338-9027427:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9035551-9035690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9042887-9042909:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9047451-9047533:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9049864-9050064:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9055408-9055628:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9057452-9057594:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9060913-9061066:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9071392-9071487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9071639-9071775:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9087991-9088174:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9097981-9098043:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9099174-9099335:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9100968-9101081:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9102349-9102494:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9105460-9105619:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9191553-9191702:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9247815-9247892:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9256631-9256765:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9286673-9286753:1:exon

KLHL14
type: Gene
subclass of: SO_0000704
RO_0002162: 9838
gene: KLHL14
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9414196..9517476
location: region:9414196-9517476:1
so has part: feature:9414196-9517476:1:exon
subclass of: SO_0000010

105086737
type: Gene
SIO_000068: ncbigene

position:9414196:1
position: 9414196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9517476:1
position: 9517476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9414196-9517476:1:exon

KLHL14
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9838
gene: KLHL14
product: kelch like family member 14
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_010977304.2
SIO_010081: KLHL14
subclass of: SO_0000673
so part of: KLHL14
location: join(9414196..9415458,9441178..9441299,9478372..9478461,9483624..9483702,9509639..9509829,9509911..9510069,9512910..9513067,9515299..9517476)
location: region:9414196-9517476:1
so has part: feature:9414196-9415458:1:exon
so has part: feature:9441178-9441299:1:exon
so has part: feature:9478372-9478461:1:exon
so has part: feature:9483624-9483702:1:exon
so has part: feature:9509639-9509829:1:exon
so has part: feature:9509911-9510069:1:exon
so has part: feature:9512910-9513067:1:exon
so has part: feature:9515299-9517476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9414196-9415458:1:exon

position:9415458:1
position: 9415458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9441178-9441299:1:exon

position:9441178:1
position: 9441178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9441299:1
position: 9441299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9478372-9478461:1:exon

position:9478372:1
position: 9478372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9478461:1
position: 9478461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9483624-9483702:1:exon

position:9483624:1
position: 9483624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9483702:1
position: 9483702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9509639-9509829:1:exon

position:9509639:1
position: 9509639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9509829:1
position: 9509829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9509911-9510069:1:exon

position:9509911:1
position: 9509911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9510069:1
position: 9510069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9512910-9513067:1:exon

position:9512910:1
position: 9512910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition