Sus scrofa isolate TJ Tabasco breed Duroc chromosome Y, Sscrofa11.1, whole genome shotgun sequence.
type: Entry
definition: Sus scrofa isolate TJ Tabasco breed Duroc chromosome Y, Sscrofa11.1, whole genome shotgun sequence.
sequence version: NC_010462.3
sequence date: 2018-01-12
sequence: sequence
division: CON
label: NC_010462.3
type: RefSeq
SIO_000068: refseq
dblink: PRJNA28993
dblink: SAMN02953785
keyword: WGS
keyword: RefSeq
source: Sus scrofa (pig)
organism: Sus scrofa
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Suina; Suidae; Sus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nLT634572.1.\nOn May 13, 2017 this sequence version replaced NC_010462.2.\nAssembly name: Sscrofa11.1\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The Swine Genome Sequencing\nConsortium (SGSC) on 2017/02/07. The original whole-genome shotgun\nproject has the accession AEMK00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: The Swine Genome Sequencing Consortium\n (SGSC)\nAssembly Date :: 2016\nAssembly Method :: Falcon v. OCT-2015\nPolishing Method :: PILON\nAssembly Name :: Sscrofa11\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 65.0x\nSequencing Technology :: PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Version :: Sus scrofa Annotation Release 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 7.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 43547828
topology: linear
so has quality: SO_0000987
location: 1..43547828
location: region:1-43547828:1
RO_0002162: 9823

NC_010462
type: RefSeq
SIO_000068: refseq

PRJNA28993
type: BioProject
SIO_000068: bioproject

SAMN02953785
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:43547828:1
position: 43547828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-43547828:1:source
so part of: sequence
organism: Sus scrofa
mol type: genomic DNA
isolate: TJ Tabasco
chromosome: Y
sex: female
breed: Duroc

9823
type: Taxonomy
SIO_000068: taxonomy

LOC110255212
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110255212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(148946..158230)
location: region:148946-158230:-1
so has part: feature:148946-158230:-1:exon
subclass of: SO_0000010

110255212
type: Gene
SIO_000068: ncbigene

position:148946:-1
position: 148946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158230:-1
position: 158230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:148946-158230:-1:exon

LOC110255212
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255212
product: short stature homeobox protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_003134914.3
SIO_010081: LOC110255212
subclass of: SO_0000673
so part of: LOC110255212
location: complement(join(148946..149214,150486..150574,150695..150752,154509..154717,157954..158230))
location: region:148946-158230:-1
so has part: feature:157954-158230:-1:exon
so has part: feature:154509-154717:-1:exon
so has part: feature:150695-150752:-1:exon
so has part: feature:150486-150574:-1:exon
so has part: feature:148946-149214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:157954-158230:-1:exon

position:157954:-1
position: 157954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:154509-154717:-1:exon

position:154509:-1
position: 154509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:154717:-1
position: 154717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:150695-150752:-1:exon

position:150695:-1
position: 150695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150752:-1
position: 150752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:150486-150574:-1:exon

position:150486:-1
position: 150486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150574:-1
position: 150574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:148946-149214:-1:exon

position:149214:-1
position: 149214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110255212
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110255212
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short stature homeobox protein
translation: MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL
SIO_010081: LOC110255212
subclass of: SO_0000673
so part of: LOC110255212
location: complement(join(148969..149214,150486..150574,150695..150752,154509..154717,157954..158230))
location: region:148969-158230:-1
so has part: feature:157954-158230:-1:exon
so has part: feature:154509-154717:-1:exon
so has part: feature:150695-150752:-1:exon
so has part: feature:150486-150574:-1:exon
so has part: feature:148969-149214:-1:exon

XP_003134962.1
type: Protein
SIO_000068: ncbiprotein

position:148969:-1
position: 148969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:157954-158230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:154509-154717:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:150695-150752:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:150486-150574:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:148969-149214:-1:exon

LOC110257972
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 172820..182067
location: region:172820-182067:1
so has part: feature:172820-182067:1:exon
subclass of: SO_0000010

110257972
type: Gene
SIO_000068: ncbigene

position:172820:1
position: 172820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:182067:1
position: 182067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172820-182067:1:exon

LOC110257972
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257972
product: short stature homeobox protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080988.1
SIO_010081: LOC110257972
subclass of: SO_0000673
so part of: LOC110257972
location: join(172820..173096,176333..176541,180292..180349,180470..180558,181799..182067)
location: region:172820-182067:1
so has part: feature:172820-173096:1:exon
so has part: feature:176333-176541:1:exon
so has part: feature:180292-180349:1:exon
so has part: feature:180470-180558:1:exon
so has part: feature:181799-182067:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:172820-173096:1:exon

position:173096:1
position: 173096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:176333-176541:1:exon

position:176333:1
position: 176333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176541:1
position: 176541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:180292-180349:1:exon

position:180292:1
position: 180292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180349:1
position: 180349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:180470-180558:1:exon

position:180470:1
position: 180470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:180558:1
position: 180558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:181799-182067:1:exon

position:181799:1
position: 181799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257972
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257972
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: short stature homeobox protein
translation: MEELTAFVSKSFDQKSKESSGGGGGGGGKKDSITYREVLESGLARSRELGGSDSNLQDITEGSGHCPVHLFKDHVDNDKDKLKEFGTGRAAEGIYDCKDKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTASHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL
SIO_010081: LOC110257972
subclass of: SO_0000673
so part of: LOC110257972
location: join(172820..173096,176333..176541,180292..180349,180470..180558,181799..182044)
location: region:172820-182044:1
so has part: feature:172820-173096:1:exon
so has part: feature:176333-176541:1:exon
so has part: feature:180292-180349:1:exon
so has part: feature:180470-180558:1:exon
so has part: feature:181799-182044:1:exon

XP_020936647.1
type: Protein
SIO_000068: ncbiprotein

position:182044:1
position: 182044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172820-173096:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:176333-176541:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:180292-180349:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:180470-180558:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:181799-182044:1:exon

OBP
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: OBP
note: odorant binding protein; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1145927..>1179835
location: region:1145927-1179835:1
so has part: feature:1145927-1179835:1:exon
subclass of: SO_0000010

396704
type: Gene
SIO_000068: ncbigene

position:1145927:1
position: 1145927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1179835:1
position: 1179835
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1145927-1179835:1:exon

OBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: OBP
product: odorant binding protein
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_213796.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 5 substitutions, 1 non-frameshifting indel and aligns at 63% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_213796.1
SIO_010081: OBP
subclass of: SO_0000673
so part of: OBP
location: join(1145927..1146004,1146461..1146600,1148682..1148756,1159198..>1159207,<1177757..>1177774,<1179825..>1179835)
location: region:1145927-1179835:1
so has part: feature:1145927-1146004:1:exon
so has part: feature:1146461-1146600:1:exon
so has part: feature:1148682-1148756:1:exon
so has part: feature:1159198-1159207:1:exon
so has part: feature:1177757-1177774:1:exon
so has part: feature:1179825-1179835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1145927-1146004:1:exon

position:1146004:1
position: 1146004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1146461-1146600:1:exon

position:1146461:1
position: 1146461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1146600:1
position: 1146600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1148682-1148756:1:exon

position:1148682:1
position: 1148682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148756:1
position: 1148756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1159198-1159207:1:exon

position:1159198:1
position: 1159198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159207:1
position: 1159207
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1177757-1177774:1:exon

position:1177757:1
position: 1177757
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:1177774:1
position: 1177774
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1179825-1179835:1:exon

position:1179825:1
position: 1179825
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

OBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: OBP
inference: similar to AA sequence (same species):RefSeq:NP_998961.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 3 substitutions, 1 non-frameshifting indel and aligns at 63% coverage compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: odorant-binding protein precursor
translation: MKSLLLSLVLGLVCAQEPQPEQDPFELSGKWITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGNTYDVNCDAGKINSTINKTI
SIO_010081: OBP
subclass of: SO_0000673
so part of: OBP
location: join(1145927..1146004,1146461..1146600,1148682..1148756,1159198..>1159207,<1177757..>1177774,<1179825..>1179835)
location: region:1145927-1179835:1
so has part: feature:1145927-1146004:1:exon
so has part: feature:1146461-1146600:1:exon
so has part: feature:1148682-1148756:1:exon
so has part: feature:1159198-1159207:1:exon
so has part: feature:1177757-1177774:1:exon
so has part: feature:1179825-1179835:1:exon

NP_998961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1145927-1146004:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1146461-1146600:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1148682-1148756:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1159198-1159207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1177757-1177774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1179825-1179835:1:exon

LOC110257916
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257916
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1189838..1190784)
location: region:1189838-1190784:-1
so has part: feature:1189838-1190784:-1:exon

110257916
type: Gene
SIO_000068: ncbigene

position:1189838:-1
position: 1189838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1190784:-1
position: 1190784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1189838-1190784:-1:exon

LOC110257916
type: Exon
subclass of: SO_0000147
RO_0002162: 9823
gene: LOC110257916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC110257916
subclass of: SO_0000673
so part of: LOC110257916
location: complement(1189838..1190784)
location: region:1189838-1190784:-1
so has part: feature:1189838-1190784:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1189838-1190784:-1:exon

LOC110257942
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1277531..1310771)
location: region:1277531-1310771:-1
so has part: feature:1277531-1310771:-1:exon
subclass of: SO_0000010

110257942
type: Gene
SIO_000068: ncbigene

position:1277531:-1
position: 1277531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310771:-1
position: 1310771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1277531-1310771:-1:exon

LOC110257942
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257942
product: uncharacterized LOC110257942
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080956.1
SIO_010081: LOC110257942
subclass of: SO_0000673
so part of: LOC110257942
location: complement(join(1277531..1278525,1290141..1290356,1292313..1292635,1308846..1308951,1310480..1310511,1310634..1310771))
location: region:1277531-1310771:-1
so has part: feature:1310634-1310771:-1:exon
so has part: feature:1310480-1310511:-1:exon
so has part: feature:1308846-1308951:-1:exon
so has part: feature:1292313-1292635:-1:exon
so has part: feature:1290141-1290356:-1:exon
so has part: feature:1277531-1278525:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1310634-1310771:-1:exon

position:1310634:-1
position: 1310634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1310480-1310511:-1:exon

position:1310480:-1
position: 1310480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310511:-1
position: 1310511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1308846-1308951:-1:exon

position:1308846:-1
position: 1308846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308951:-1
position: 1308951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1292313-1292635:-1:exon

position:1292313:-1
position: 1292313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1292635:-1
position: 1292635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1290141-1290356:-1:exon

position:1290141:-1
position: 1290141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1290356:-1
position: 1290356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1277531-1278525:-1:exon

position:1278525:-1
position: 1278525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257942
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257942
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110257942
translation: MTGEGSALTGFPCFWCCSEMCTSHFIWVELNVPQMALGRVFFSTASLAASRQQPLSRTWVQVLVKERHTSVDAQLSFDTSGQSVRAWDSGGRSPESQSQAPGQQHRRRLSTCGAKQILGPAPGLPRRGRGGGALQPVHLRTCRWSSRKLTAEESTERTAERGDHVWQRKLIRNGLETGALKELANAKASLQGEENAVETSMVTNAAEKMTGHLLTELYTRGSLKELRDHKVSLGCISELFPKGSNASFDSKEQQTGGKSILAEGMMCGKMQRQWGTKQANAPKTRIPCLQVENSAADKDRMQAFILQRWCFVAPRLVLVVQLSGLHLCWGFISAEELKDIVLCIP
SIO_010081: LOC110257942
subclass of: SO_0000673
so part of: LOC110257942
location: complement(join(1278303..1278525,1290141..1290356,1292313..1292635,1308846..1308951,1310480..1310511,1310634..1310771))
location: region:1278303-1310771:-1
so has part: feature:1310634-1310771:-1:exon
so has part: feature:1310480-1310511:-1:exon
so has part: feature:1308846-1308951:-1:exon
so has part: feature:1292313-1292635:-1:exon
so has part: feature:1290141-1290356:-1:exon
so has part: feature:1278303-1278525:-1:exon

XP_020936615.1
type: Protein
SIO_000068: ncbiprotein

position:1278303:-1
position: 1278303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1310634-1310771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1310480-1310511:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1308846-1308951:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1292313-1292635:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290141-1290356:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1278303-1278525:-1:exon

LOC110257730
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257730
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1330559..1363171)
location: region:1330559-1363171:-1
so has part: feature:1330559-1363171:-1:exon
subclass of: SO_0000011

110257730
type: Gene
SIO_000068: ncbigene

position:1330559:-1
position: 1330559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363171:-1
position: 1363171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1330559-1363171:-1:exon

LOC110257730
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257730
product: uncharacterized LOC110257730, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002340923.1
SIO_010081: LOC110257730
subclass of: SO_0000673
so part of: LOC110257730
location: complement(join(1330559..1331925,1333890..1334965,1339457..1339565,1342645..1342710,1342856..1342946,1356225..1356534,1362967..1363171))
location: region:1330559-1363171:-1
so has part: feature:1362967-1363171:-1:exon
so has part: feature:1356225-1356534:-1:exon
so has part: feature:1342856-1342946:-1:exon
so has part: feature:1342645-1342710:-1:exon
so has part: feature:1339457-1339565:-1:exon
so has part: feature:1333890-1334965:-1:exon
so has part: feature:1330559-1331925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1362967-1363171:-1:exon

position:1362967:-1
position: 1362967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1356225-1356534:-1:exon

position:1356225:-1
position: 1356225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356534:-1
position: 1356534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1342856-1342946:-1:exon

position:1342856:-1
position: 1342856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342946:-1
position: 1342946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1342645-1342710:-1:exon

position:1342645:-1
position: 1342645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1342710:-1
position: 1342710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1339457-1339565:-1:exon

position:1339457:-1
position: 1339457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339565:-1
position: 1339565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1333890-1334965:-1:exon

position:1333890:-1
position: 1333890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334965:-1
position: 1334965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1330559-1331925:-1:exon

position:1331925:-1
position: 1331925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257730
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257730
product: uncharacterized LOC110257730, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002340922.1
SIO_010081: LOC110257730
subclass of: SO_0000673
so part of: LOC110257730
location: complement(join(1330559..1331925,1333714..1334965,1339457..1339565,1342645..1342710,1342856..1342946,1356225..1356534,1362967..1363171))
location: region:1330559-1363171:-1
so has part: feature:1362967-1363171:-1:exon
so has part: feature:1356225-1356534:-1:exon
so has part: feature:1342856-1342946:-1:exon
so has part: feature:1342645-1342710:-1:exon
so has part: feature:1339457-1339565:-1:exon
so has part: feature:1333714-1334965:-1:exon
so has part: feature:1330559-1331925:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1362967-1363171:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1356225-1356534:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1342856-1342946:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1342645-1342710:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1339457-1339565:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333714-1334965:-1:exon

position:1333714:-1
position: 1333714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1330559-1331925:-1:exon

LOC102164143
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC102164143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1580594..1623537)
location: region:1580594-1623537:-1
so has part: feature:1580594-1623537:-1:exon
subclass of: SO_0000011

102164143
type: Gene
SIO_000068: ncbigene

position:1580594:-1
position: 1580594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623537:-1
position: 1623537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1580594-1623537:-1:exon

LOC102164143
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102164143
product: uncharacterized LOC102164143, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002340929.1
SIO_010081: LOC102164143
subclass of: SO_0000673
so part of: LOC102164143
location: complement(join(1580594..1581391,1590202..1590345,1593712..1593814,1597122..1597344,1598203..1599204,1621881..1621964,1623120..1623537))
location: region:1580594-1623537:-1
so has part: feature:1623120-1623537:-1:exon
so has part: feature:1621881-1621964:-1:exon
so has part: feature:1598203-1599204:-1:exon
so has part: feature:1597122-1597344:-1:exon
so has part: feature:1593712-1593814:-1:exon
so has part: feature:1590202-1590345:-1:exon
so has part: feature:1580594-1581391:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1623120-1623537:-1:exon

position:1623120:-1
position: 1623120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1621881-1621964:-1:exon

position:1621881:-1
position: 1621881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1621964:-1
position: 1621964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1598203-1599204:-1:exon

position:1598203:-1
position: 1598203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1599204:-1
position: 1599204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1597122-1597344:-1:exon

position:1597122:-1
position: 1597122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1597344:-1
position: 1597344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1593712-1593814:-1:exon

position:1593712:-1
position: 1593712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1593814:-1
position: 1593814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1590202-1590345:-1:exon

position:1590202:-1
position: 1590202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590345:-1
position: 1590345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1580594-1581391:-1:exon

position:1581391:-1
position: 1581391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102164143
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102164143
product: uncharacterized LOC102164143, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002340927.1
SIO_010081: LOC102164143
subclass of: SO_0000673
so part of: LOC102164143
location: complement(join(1580594..1581391,1590206..1590345,1593712..1593814,1597122..1597344,1598203..1599204,1621881..1621964,1623120..1623536))
location: region:1580594-1623536:-1
so has part: feature:1623120-1623536:-1:exon
so has part: feature:1621881-1621964:-1:exon
so has part: feature:1598203-1599204:-1:exon
so has part: feature:1597122-1597344:-1:exon
so has part: feature:1593712-1593814:-1:exon
so has part: feature:1590206-1590345:-1:exon
so has part: feature:1580594-1581391:-1:exon

position:1623536:-1
position: 1623536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1623120-1623536:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1621881-1621964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1598203-1599204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597122-1597344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1593712-1593814:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1590206-1590345:-1:exon

position:1590206:-1
position: 1590206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1580594-1581391:-1:exon

LOC102164143
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102164143
product: uncharacterized LOC102164143, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002340928.1
SIO_010081: LOC102164143
subclass of: SO_0000673
so part of: LOC102164143
location: complement(join(1580594..1581391,1590206..1590345,1597122..1597344,1598203..1599204,1621881..1621964,1623120..1623534))
location: region:1580594-1623534:-1
so has part: feature:1623120-1623534:-1:exon
so has part: feature:1621881-1621964:-1:exon
so has part: feature:1598203-1599204:-1:exon
so has part: feature:1597122-1597344:-1:exon
so has part: feature:1590206-1590345:-1:exon
so has part: feature:1580594-1581391:-1:exon

position:1623534:-1
position: 1623534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1623120-1623534:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1621881-1621964:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1598203-1599204:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1597122-1597344:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1590206-1590345:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1580594-1581391:-1:exon

LOC100624109
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100624109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1645491..1946441)
location: region:1645491-1946441:-1
so has part: feature:1645491-1946441:-1:exon
subclass of: SO_0000010

100624109
type: Gene
SIO_000068: ncbigene

position:1645491:-1
position: 1645491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946441:-1
position: 1946441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1645491-1946441:-1:exon

LOC100624109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624109
product: neuroligin-4, X-linked, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 25 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_021080990.1
SIO_010081: LOC100624109
subclass of: SO_0000673
so part of: LOC100624109
location: complement(join(1645491..1648146,1656948..1657737,1665083..1665268,1794240..1794392,1799067..1799126,1894123..1894868,1941384..1941470,1946131..1946441))
location: region:1645491-1946441:-1
so has part: feature:1946131-1946441:-1:exon
so has part: feature:1941384-1941470:-1:exon
so has part: feature:1894123-1894868:-1:exon
so has part: feature:1799067-1799126:-1:exon
so has part: feature:1794240-1794392:-1:exon
so has part: feature:1665083-1665268:-1:exon
so has part: feature:1656948-1657737:-1:exon
so has part: feature:1645491-1648146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1946131-1946441:-1:exon

position:1946131:-1
position: 1946131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1941384-1941470:-1:exon

position:1941384:-1
position: 1941384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1941470:-1
position: 1941470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1894123-1894868:-1:exon

position:1894123:-1
position: 1894123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1894868:-1
position: 1894868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1799067-1799126:-1:exon

position:1799067:-1
position: 1799067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1799126:-1
position: 1799126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1794240-1794392:-1:exon

position:1794240:-1
position: 1794240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1794392:-1
position: 1794392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1665083-1665268:-1:exon

position:1665083:-1
position: 1665083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665268:-1
position: 1665268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1656948-1657737:-1:exon

position:1656948:-1
position: 1656948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657737:-1
position: 1657737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1645491-1648146:-1:exon

position:1648146:-1
position: 1648146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100624109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624109
product: neuroligin-4, X-linked, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 33 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_021080992.1
SIO_010081: LOC100624109
subclass of: SO_0000673
so part of: LOC100624109
location: complement(join(1645492..1648146,1656948..1657737,1665083..1665268,1794240..1794392,1894123..1894868,1941384..1941470,1946131..1946304))
location: region:1645492-1946304:-1
so has part: feature:1946131-1946304:-1:exon
so has part: feature:1941384-1941470:-1:exon
so has part: feature:1894123-1894868:-1:exon
so has part: feature:1794240-1794392:-1:exon
so has part: feature:1665083-1665268:-1:exon
so has part: feature:1656948-1657737:-1:exon
so has part: feature:1645492-1648146:-1:exon

position:1645492:-1
position: 1645492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946304:-1
position: 1946304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1946131-1946304:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1941384-1941470:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1894123-1894868:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794240-1794392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1665083-1665268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656948-1657737:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1645492-1648146:-1:exon

LOC100624109
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624109
product: neuroligin-4, X-linked, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021080991.1
SIO_010081: LOC100624109
subclass of: SO_0000673
so part of: LOC100624109
location: complement(join(1647297..1648146,1656948..1657737,1665083..1665268,1794240..1794392,1799067..1799126,1894123..1894868,1919137..1919892))
location: region:1647297-1919892:-1
so has part: feature:1919137-1919892:-1:exon
so has part: feature:1894123-1894868:-1:exon
so has part: feature:1799067-1799126:-1:exon
so has part: feature:1794240-1794392:-1:exon
so has part: feature:1665083-1665268:-1:exon
so has part: feature:1656948-1657737:-1:exon
so has part: feature:1647297-1648146:-1:exon

position:1647297:-1
position: 1647297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1919892:-1
position: 1919892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1919137-1919892:-1:exon

position:1919137:-1
position: 1919137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1894123-1894868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1799067-1799126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1794240-1794392:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1665083-1665268:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1656948-1657737:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1647297-1648146:-1:exon

LOC100624109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-4, X-linked isoform X2
translation: MSRPQGLVWLPLVFTPVCVMLHAKVLLCITALAIKFTLIDSQAQYPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRNATQFAAVCPQHLDERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDDIHDQNSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQSGTALSSWAVNYQPAKYTRILADRVGCNMLDTTDMVDCLRNKNYKELIQQTITPATYHISFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTPNDFDFSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQWVAPAVATADLHAQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMIGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVPHLHNLNEIFQYVSTTTKVPPPDMTSFPYGTRRSPAKIWPTTKRPAITPANNPKHSKDPHKTGPEDTTVLIETKRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHETHRRPSPQRNTTNDIAHMQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPNTITMIPSTLTGMQPLHTFNTFSGGQNSSNLPHGHSTTRV
SIO_010081: LOC100624109
subclass of: SO_0000673
so part of: LOC100624109
location: complement(join(1647297..1648146,1656948..1657737,1665083..1665268,1794240..1794392,1894123..1894594))
location: region:1647297-1894594:-1
so has part: feature:1894123-1894594:-1:exon
so has part: feature:1794240-1794392:-1:exon
so has part: feature:1665083-1665268:-1:exon
so has part: feature:1656948-1657737:-1:exon
so has part: feature:1647297-1648146:-1:exon

XP_020936651.1
type: Protein
SIO_000068: ncbiprotein

position:1894594:-1
position: 1894594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1894123-1894594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1794240-1794392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1665083-1665268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1656948-1657737:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1647297-1648146:-1:exon

LOC100624109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-4, X-linked isoform X1
translation: MSRPQGLVWLPLVFTPVCVMLHAKVLLCITALAIKFTLIDSQAQYPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRNATQFAAVCPQHLDERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDGANTKKNADDISSNDRGEDEDIHDQNSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQSGTALSSWAVNYQPAKYTRILADRVGCNMLDTTDMVDCLRNKNYKELIQQTITPATYHISFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTPNDFDFSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQWVAPAVATADLHAQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMIGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVPHLHNLNEIFQYVSTTTKVPPPDMTSFPYGTRRSPAKIWPTTKRPAITPANNPKHSKDPHKTGPEDTTVLIETKRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHETHRRPSPQRNTTNDIAHMQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPNTITMIPSTLTGMQPLHTFNTFSGGQNSSNLPHGHSTTRV
SIO_010081: LOC100624109
subclass of: SO_0000673
so part of: LOC100624109
location: complement(join(1647297..1648146,1656948..1657737,1665083..1665268,1794240..1794392,1799067..1799126,1894123..1894594))
location: region:1647297-1894594:-1
so has part: feature:1894123-1894594:-1:exon
so has part: feature:1799067-1799126:-1:exon
so has part: feature:1794240-1794392:-1:exon
so has part: feature:1665083-1665268:-1:exon
so has part: feature:1656948-1657737:-1:exon
so has part: feature:1647297-1648146:-1:exon

XP_020936649.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1894123-1894594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799067-1799126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1794240-1794392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1665083-1665268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656948-1657737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1647297-1648146:-1:exon

LOC100624109
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624109
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuroligin-4, X-linked isoform X1
translation: MSRPQGLVWLPLVFTPVCVMLHAKVLLCITALAIKFTLIDSQAQYPVVNTNYGKIRGLRTPLPNEILGPVEQYLGVPYASPPTGERRFQPPEPPSSWTGIRNATQFAAVCPQHLDERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDGANTKKNADDISSNDRGEDEDIHDQNSKKPVMVYIHGGSYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQIQALRWIEENVGAFGGDPKRVTIFGSGAGASCVSLLTLSHYSEGLFQKAIIQSGTALSSWAVNYQPAKYTRILADRVGCNMLDTTDMVDCLRNKNYKELIQQTITPATYHISFGPVIDGDVIPDDPQILMEQGEFLNYDIMLGVNQGEGLKFVDGIVDNEDGVTPNDFDFSVSNFVDNLYGYPEGKDTLRETIKFMYTDWADKENPETRRKTLVALFTDHQWVAPAVATADLHAQYGSPTYFYAFYHHCQSEMKPSWADSAHGDEVPYVFGIPMIGPTELFSCNFSKNDVMLSAVVMTYWTNFAKTGDPNQPVPQDTKFIHTKPNRFEEVAWSKYNPKDQLYLHIGLKPRVRDHYRATKVAFWLELVPHLHNLNEIFQYVSTTTKVPPPDMTSFPYGTRRSPAKIWPTTKRPAITPANNPKHSKDPHKTGPEDTTVLIETKRDYSTELSVTIAVGASLLFLNILAFAALYYKKDKRRHETHRRPSPQRNTTNDIAHMQNEEIMSLQMKQLEHDHECESLQAHDTLRLTCPPDYTLTLRRSPDDIPLMTPNTITMIPSTLTGMQPLHTFNTFSGGQNSSNLPHGHSTTRV
SIO_010081: LOC100624109
subclass of: SO_0000673
so part of: LOC100624109
location: complement(join(1647297..1648146,1656948..1657737,1665083..1665268,1794240..1794392,1799067..1799126,1894123..1894594))
location: region:1647297-1894594:-1
so has part: feature:1894123-1894594:-1:exon
so has part: feature:1799067-1799126:-1:exon
so has part: feature:1794240-1794392:-1:exon
so has part: feature:1665083-1665268:-1:exon
so has part: feature:1656948-1657737:-1:exon
so has part: feature:1647297-1648146:-1:exon

XP_020936650.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1894123-1894594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1799067-1799126:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1794240-1794392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1665083-1665268:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1656948-1657737:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1647297-1648146:-1:exon

LOC110257973
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257973
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1962840..2004905)
location: region:1962840-2004905:-1
so has part: feature:1962840-2004905:-1:exon
subclass of: SO_0000011

110257973
type: Gene
SIO_000068: ncbigene

position:1962840:-1
position: 1962840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2004905:-1
position: 2004905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1962840-2004905:-1:exon

LOC110257973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257973
product: uncharacterized LOC110257973, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_002340942.1
SIO_010081: LOC110257973
subclass of: SO_0000673
so part of: LOC110257973
location: complement(join(1962840..1963052,1967714..1967883,2004407..2004905))
location: region:1962840-2004905:-1
so has part: feature:2004407-2004905:-1:exon
so has part: feature:1967714-1967883:-1:exon
so has part: feature:1962840-1963052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2004407-2004905:-1:exon

position:2004407:-1
position: 2004407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1967714-1967883:-1:exon

position:1967714:-1
position: 1967714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1967883:-1
position: 1967883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1962840-1963052:-1:exon

position:1963052:-1
position: 1963052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257973
product: uncharacterized LOC110257973, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XR_002340941.1
SIO_010081: LOC110257973
subclass of: SO_0000673
so part of: LOC110257973
location: complement(join(1962840..1963052,1967714..1967883,2004135..2004903))
location: region:1962840-2004903:-1
so has part: feature:2004135-2004903:-1:exon
so has part: feature:1967714-1967883:-1:exon
so has part: feature:1962840-1963052:-1:exon

position:2004903:-1
position: 2004903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2004135-2004903:-1:exon

position:2004135:-1
position: 2004135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1967714-1967883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962840-1963052:-1:exon

LOC110257973
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257973
product: uncharacterized LOC110257973, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002340943.1
SIO_010081: LOC110257973
subclass of: SO_0000673
so part of: LOC110257973
location: complement(join(1962840..1963052,1967714..1967883,2003879..2004018))
location: region:1962840-2004018:-1
so has part: feature:2003879-2004018:-1:exon
so has part: feature:1967714-1967883:-1:exon
so has part: feature:1962840-1963052:-1:exon

position:2004018:-1
position: 2004018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2003879-2004018:-1:exon

position:2003879:-1
position: 2003879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1967714-1967883:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1962840-1963052:-1:exon

LOC110257915
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2028784..2077921
location: region:2028784-2077921:1
so has part: feature:2028784-2077921:1:exon
subclass of: SO_0000011

110257915
type: Gene
SIO_000068: ncbigene

position:2028784:1
position: 2028784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2077921:1
position: 2077921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2028784-2077921:1:exon

LOC110257915
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257915
product: uncharacterized LOC110257915
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002340921.1
SIO_010081: LOC110257915
subclass of: SO_0000673
so part of: LOC110257915
location: join(2028784..2029940,2030352..2030667,2032878..2032958,2077374..2077921)
location: region:2028784-2077921:1
so has part: feature:2028784-2029940:1:exon
so has part: feature:2030352-2030667:1:exon
so has part: feature:2032878-2032958:1:exon
so has part: feature:2077374-2077921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2028784-2029940:1:exon

position:2029940:1
position: 2029940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2030352-2030667:1:exon

position:2030352:1
position: 2030352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2030667:1
position: 2030667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2032878-2032958:1:exon

position:2032878:1
position: 2032878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2032958:1
position: 2032958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2077374-2077921:1:exon

position:2077374:1
position: 2077374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257919
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257919
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2098521..2121944)
location: region:2098521-2121944:-1
so has part: feature:2098521-2121944:-1:exon
subclass of: SO_0000011

110257919
type: Gene
SIO_000068: ncbigene

position:2098521:-1
position: 2098521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2121944:-1
position: 2121944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2098521-2121944:-1:exon

LOC110257919
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257919
product: uncharacterized LOC110257919
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002340926.1
SIO_010081: LOC110257919
subclass of: SO_0000673
so part of: LOC110257919
location: complement(join(2098521..2102586,2104797..2105112,2105524..2105614,2121019..2121944))
location: region:2098521-2121944:-1
so has part: feature:2121019-2121944:-1:exon
so has part: feature:2105524-2105614:-1:exon
so has part: feature:2104797-2105112:-1:exon
so has part: feature:2098521-2102586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2121019-2121944:-1:exon

position:2121019:-1
position: 2121019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2105524-2105614:-1:exon

position:2105524:-1
position: 2105524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105614:-1
position: 2105614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2104797-2105112:-1:exon

position:2104797:-1
position: 2104797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2105112:-1
position: 2105112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2098521-2102586:-1:exon

position:2102586:-1
position: 2102586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257884
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257884
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2142388..2397361)
location: region:2142388-2397361:-1
so has part: feature:2142388-2397361:-1:exon
subclass of: SO_0000011

110257884
type: Gene
SIO_000068: ncbigene

position:2142388:-1
position: 2142388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2397361:-1
position: 2397361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2142388-2397361:-1:exon

LOC110257884
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257884
product: uncharacterized LOC110257884
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002340900.1
SIO_010081: LOC110257884
subclass of: SO_0000673
so part of: LOC110257884
location: complement(join(2142388..2146453,2148664..2148979,2149391..2149481,2164772..2164881,2273825..2278338,2374378..2374786,2392060..2392199,2396424..2397046,2397188..2397361))
location: region:2142388-2397361:-1
so has part: feature:2397188-2397361:-1:exon
so has part: feature:2396424-2397046:-1:exon
so has part: feature:2392060-2392199:-1:exon
so has part: feature:2374378-2374786:-1:exon
so has part: feature:2273825-2278338:-1:exon
so has part: feature:2164772-2164881:-1:exon
so has part: feature:2149391-2149481:-1:exon
so has part: feature:2148664-2148979:-1:exon
so has part: feature:2142388-2146453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2397188-2397361:-1:exon

position:2397188:-1
position: 2397188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2396424-2397046:-1:exon

position:2396424:-1
position: 2396424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2397046:-1
position: 2397046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2392060-2392199:-1:exon

position:2392060:-1
position: 2392060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392199:-1
position: 2392199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2374378-2374786:-1:exon

position:2374378:-1
position: 2374378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2374786:-1
position: 2374786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2273825-2278338:-1:exon

position:2273825:-1
position: 2273825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2278338:-1
position: 2278338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2164772-2164881:-1:exon

position:2164772:-1
position: 2164772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2164881:-1
position: 2164881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2149391-2149481:-1:exon

position:2149391:-1
position: 2149391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2149481:-1
position: 2149481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2148664-2148979:-1:exon

position:2148664:-1
position: 2148664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2148979:-1
position: 2148979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2142388-2146453:-1:exon

position:2146453:-1
position: 2146453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PUDP
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: PUDP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <2681502..2701629
location: region:2681502-2701629:1
so has part: feature:2681502-2701629:1:exon
subclass of: SO_0000010

100521877
type: Gene
SIO_000068: ncbigene

position:2681502:1
position: 2681502
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:2701629:1
position: 2701629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2681502-2701629:1:exon

PUDP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PUDP
product: pseudouridine 5'-phosphatase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 179 samples with support for all annotated introns
transcript id: XM_021080890.1
SIO_010081: PUDP
subclass of: SO_0000673
so part of: PUDP
location: join(<2681502..2681750,2700987..2701629)
location: region:2681502-2701629:1
so has part: feature:2681502-2681750:1:exon
so has part: feature:2700987-2701629:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2681502-2681750:1:exon

position:2681750:1
position: 2681750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2700987-2701629:1:exon

position:2700987:1
position: 2700987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PUDP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PUDP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pseudouridine-5'-phosphatase isoform X1
translation: RLPPPPGVEKLIRHLRAHRVPCAVATSSGSESFQMKTSRHGDFFSLFHHVVLGDDPEVRSGKPEPDIFLACARRFSPVPPAEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLDRALTTKATLVLDSLQDFQPELFGLPPYE
SIO_010081: PUDP
subclass of: SO_0000673
so part of: PUDP
location: join(<2681502..2681750,2700987..2701163)
location: region:2681502-2701163:1
so has part: feature:2681502-2681750:1:exon
so has part: feature:2700987-2701163:1:exon

XP_020936549.1
type: Protein
SIO_000068: ncbiprotein

position:2701163:1
position: 2701163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2681502-2681750:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2700987-2701163:1:exon

STS
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: STS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2747102..2828322
location: region:2747102-2828322:1
so has part: feature:2747102-2828322:1:exon
subclass of: SO_0000010

448816
type: Gene
SIO_000068: ncbigene

position:2747102:1
position: 2747102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2828322:1
position: 2828322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747102-2828322:1:exon

STS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: STS
product: steroid sulfatase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 4 long SRA reads, 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080957.1
SIO_010081: STS
subclass of: SO_0000673
so part of: STS
location: join(2747102..2747256,2749297..2749418,2749507..2749629,2751999..2752476,2752662..2752774,2753477..2753589,2785368..2785716,2805290..2805449,2815015..2815136,2825273..2828322)
location: region:2747102-2828322:1
so has part: feature:2747102-2747256:1:exon
so has part: feature:2749297-2749418:1:exon
so has part: feature:2749507-2749629:1:exon
so has part: feature:2751999-2752476:1:exon
so has part: feature:2752662-2752774:1:exon
so has part: feature:2753477-2753589:1:exon
so has part: feature:2785368-2785716:1:exon
so has part: feature:2805290-2805449:1:exon
so has part: feature:2815015-2815136:1:exon
so has part: feature:2825273-2828322:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2747102-2747256:1:exon

position:2747256:1
position: 2747256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2749297-2749418:1:exon

position:2749297:1
position: 2749297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2749418:1
position: 2749418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2749507-2749629:1:exon

position:2749507:1
position: 2749507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2749629:1
position: 2749629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2751999-2752476:1:exon

position:2751999:1
position: 2751999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752476:1
position: 2752476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2752662-2752774:1:exon

position:2752662:1
position: 2752662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2752774:1
position: 2752774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2753477-2753589:1:exon

position:2753477:1
position: 2753477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2753589:1
position: 2753589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2785368-2785716:1:exon

position:2785368:1
position: 2785368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2785716:1
position: 2785716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2805290-2805449:1:exon

position:2805290:1
position: 2805290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2805449:1
position: 2805449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2815015-2815136:1:exon

position:2815015:1
position: 2815015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2815136:1
position: 2815136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2825273-2828322:1:exon

position:2825273:1
position: 2825273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: STS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: steryl-sulfatase isoform X2
translation: MRIFCLLLLVLGEAWSHVTPRPNFVLLMADDLGIGDPGCYGNKTLRTPNIDRLAGGGVKLTQHLAAAPLCTPSRAAFLTGRYPIRSGMAAQNQVGVFIFSASSGGLPPSEITFAKLLKSQGYTTALIGKWHLGTNCHNSSDFCHHPLSHGFDYFHGIPVTNLRDCKPGEGSVFTTAFRLLVFIPLQVLALALLTLAGLRWLGLFRVPPALIFSLLFLAALVLGLLLCFLHFFRPLNCFLMRNHDITQQPMSYDNLTQRLTADAVRFIQRWVPPSSPGRLGRVARSSGICGVIMGPSGDHPSLDYAGVCPRERRQVCILDSRGCSYAVGAHGELNRQPAQPDVGITGAAAHILSTARGSELSLVMLHSDGIFWWSPPGAPTPPRPPLGSCERAQHTRPFPPPPRKLRDKSMRVNHIPVLVKFGRFEHSFFSLSGQILDVLDELKLANNTLIYFSSDQGAHVEEVTVKGELHGGSNGIYKGGKATNWEGGIRVPGILRWPGVIQAGLELDAPTSNMDLFPTVANLAGAPLPEDRIIDGRDLMPLLLGQSQRSDHEFLFHYCNFYLNAVRWHPRNSTSIWKAFFFTPKFSPEGANGCFATHVCFCHGHSITHHDPPLLFDISQDPRETDPLTPTSEPRFWEILEVMQQAAAHHTRTLQDVPDQLSPGNIIWKPWLQMCCSWSGLSCQCDREKEEGRGSH
SIO_010081: STS
subclass of: SO_0000673
so part of: STS
location: join(2747120..2747256,2749297..2749418,2749507..2749629,2751999..2752476,2752662..2752774,2753477..2753589,2785368..2785716,2805290..2805449,2815015..2815136,2825273..2825646)
location: region:2747120-2825646:1
so has part: feature:2747120-2747256:1:exon
so has part: feature:2749297-2749418:1:exon
so has part: feature:2749507-2749629:1:exon
so has part: feature:2751999-2752476:1:exon
so has part: feature:2752662-2752774:1:exon
so has part: feature:2753477-2753589:1:exon
so has part: feature:2785368-2785716:1:exon
so has part: feature:2805290-2805449:1:exon
so has part: feature:2815015-2815136:1:exon
so has part: feature:2825273-2825646:1:exon

XP_020936616.1
type: Protein
SIO_000068: ncbiprotein

position:2747120:1
position: 2747120
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2825646:1
position: 2825646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2747120-2747256:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2749297-2749418:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2749507-2749629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2751999-2752476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2752662-2752774:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2753477-2753589:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2785368-2785716:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2805290-2805449:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2815015-2815136:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2825273-2825646:1:exon

LOC110257927
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257927
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3053750..3074648
location: region:3053750-3074648:1
so has part: feature:3053750-3074648:1:exon
subclass of: SO_0000011

110257927
type: Gene
SIO_000068: ncbigene

position:3053750:1
position: 3053750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3074648:1
position: 3074648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3053750-3074648:1:exon

LOC110257927
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257927
product: uncharacterized LOC110257927
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002340930.1
SIO_010081: LOC110257927
subclass of: SO_0000673
so part of: LOC110257927
location: join(3053750..3053819,3056494..3056648,3073953..3074648)
location: region:3053750-3074648:1
so has part: feature:3053750-3053819:1:exon
so has part: feature:3056494-3056648:1:exon
so has part: feature:3073953-3074648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3053750-3053819:1:exon

position:3053819:1
position: 3053819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3056494-3056648:1:exon

position:3056494:1
position: 3056494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3056648:1
position: 3056648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3073953-3074648:1:exon

position:3073953:1
position: 3073953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102166006
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC102166006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3085878..3238115
location: region:3085878-3238115:1
so has part: feature:3085878-3238115:1:exon
subclass of: SO_0000011

102166006
type: Gene
SIO_000068: ncbigene

position:3085878:1
position: 3085878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3238115:1
position: 3238115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3085878-3238115:1:exon

LOC102166006
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102166006
product: uncharacterized LOC102166006, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002340915.1
SIO_010081: LOC102166006
subclass of: SO_0000673
so part of: LOC102166006
location: join(3085878..3086912,3127457..3127551,3237332..3238115)
location: region:3085878-3238115:1
so has part: feature:3085878-3086912:1:exon
so has part: feature:3127457-3127551:1:exon
so has part: feature:3237332-3238115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3085878-3086912:1:exon

position:3086912:1
position: 3086912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3127457-3127551:1:exon

position:3127457:1
position: 3127457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3127551:1
position: 3127551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3237332-3238115:1:exon

position:3237332:1
position: 3237332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNPLA4
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: PNPLA4
note: patatin like phospholipase domain containing 4; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(3287635..3369286)
location: region:3287635-3369286:-1
so has part: feature:3287635-3369286:-1:exon
subclass of: SO_0000010

100294680
type: Gene
SIO_000068: ncbigene

position:3287635:-1
position: 3287635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3369286:-1
position: 3369286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3287635-3369286:-1:exon

PNPLA4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002340894.1
SIO_010081: PNPLA4
so part of: PNPLA4
location: complement(join(3287635..3291331,3292795..3292899,3335144..3335296,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368988))
location: region:3287635-3368988:-1
so has part: feature:3368820-3368988:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3292795-3292899:-1:exon
so has part: feature:3287635-3291331:-1:exon

position:3368988:-1
position: 3368988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368988:-1:exon

position:3368820:-1
position: 3368820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

position:3367492:-1
position: 3367492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3367676:-1
position: 3367676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

position:3363312:-1
position: 3363312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3363406:-1
position: 3363406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

position:3362571:-1
position: 3362571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3362706:-1
position: 3362706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

position:3335144:-1
position: 3335144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3335296:-1
position: 3335296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3292795-3292899:-1:exon

position:3292795:-1
position: 3292795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3292899:-1
position: 3292899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3287635-3291331:-1:exon

position:3291331:-1
position: 3291331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPLA4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001302515.2
SIO_010081: PNPLA4
so part of: PNPLA4
location: complement(join(3290956..3291331,3292795..3292899,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368983))
location: region:3290956-3368983:-1
so has part: feature:3368820-3368983:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3292795-3292899:-1:exon
so has part: feature:3290956-3291331:-1:exon

position:3290956:-1
position: 3290956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368983:-1
position: 3368983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

position:3353186:-1
position: 3353186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3353251:-1
position: 3353251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3292795-3292899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3290956-3291331:-1:exon

PNPLA4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_309176.3
SIO_010081: PNPLA4
so part of: PNPLA4
location: complement(join(3291767..3292035,3292795..3292899,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368983))
location: region:3291767-3368983:-1
so has part: feature:3368820-3368983:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3292795-3292899:-1:exon
so has part: feature:3291767-3292035:-1:exon

position:3291767:-1
position: 3291767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3292795-3292899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3291767-3292035:-1:exon

position:3292035:-1
position: 3292035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPLA4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XR_001302514.2
SIO_010081: PNPLA4
so part of: PNPLA4
location: complement(join(3291767..3292287,3292795..3292899,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368983))
location: region:3291767-3368983:-1
so has part: feature:3368820-3368983:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3292795-3292899:-1:exon
so has part: feature:3291767-3292287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3292795-3292899:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3291767-3292287:-1:exon

position:3292287:-1
position: 3292287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021080875.1
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310264..3310695,3329292..3329388,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3369209..3369286))
location: region:3310264-3369286:-1
so has part: feature:3369209-3369286:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310264-3310695:-1:exon

position:3310264:-1
position: 3310264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369209-3369286:-1:exon

position:3369209:-1
position: 3369209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3329292-3329388:-1:exon

position:3329292:-1
position: 3329292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3329388:-1
position: 3329388
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3310264-3310695:-1:exon

position:3310695:-1
position: 3310695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_021080872.1
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310264..3310695,3329292..3329388,3335144..3335296,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368993))
location: region:3310264-3368993:-1
so has part: feature:3368820-3368993:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310264-3310695:-1:exon

position:3368993:-1
position: 3368993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3329292-3329388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310264-3310695:-1:exon

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005673387.3
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310264..3310695,3329292..3329388,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368986))
location: region:3310264-3368986:-1
so has part: feature:3368820-3368986:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310264-3310695:-1:exon

position:3368986:-1
position: 3368986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368986:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3329292-3329388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3310264-3310695:-1:exon

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021080873.1
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310264..3310695,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368982))
location: region:3310264-3368982:-1
so has part: feature:3368820-3368982:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3310264-3310695:-1:exon

position:3368982:-1
position: 3368982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368982:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310264-3310695:-1:exon

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_021080874.1
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310264..3310695,3329292..3329388,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368615..3368772))
location: region:3310264-3368772:-1
so has part: feature:3368615-3368772:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310264-3310695:-1:exon

position:3368772:-1
position: 3368772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368615-3368772:-1:exon

position:3368615:-1
position: 3368615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3329292-3329388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3310264-3310695:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X9
translation: MPWPAPWSLSTHAIMKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQVLLASSFVPIYAGLRPVAYRGQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILTQPVSVCFLWPRELSSIELKYISSCPATRENAALHPSASLSVACPAAGLITAFPSKV
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310619..3310695,3329292..3329388,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368615..3368651))
location: region:3310619-3368651:-1
so has part: feature:3368615-3368651:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310619-3310695:-1:exon

XP_020936533.1
type: Protein
SIO_000068: ncbiprotein

position:3310619:-1
position: 3310619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368651:-1
position: 3368651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368615-3368651:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3329292-3329388:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3310619-3310695:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X8
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILTQPVSVCFLWPRELSSIELKYISSCPATRENAALHPSASLSVACPAAGLITAFPSKV
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310619..3310695,3329292..3329388,3335144..3335296,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3310619-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310619-3310695:-1:exon

XP_020936531.1
type: Protein
SIO_000068: ncbiprotein

position:3367671:-1
position: 3367671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3329292-3329388:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3310619-3310695:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X2
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQVLLASSFVPIYAGLRPVAYRGQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILTQPVSVCFLWPRELSSIELKYISSCPATRENAALHPSASLSVACPAAGLITAFPSKV
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310619..3310695,3329292..3329388,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3310619-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310619-3310695:-1:exon

XP_020936534.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3329292-3329388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310619-3310695:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X2
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQVLLASSFVPIYAGLRPVAYRGQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILTQPVSVCFLWPRELSSIELKYISSCPATRENAALHPSASLSVACPAAGLITAFPSKV
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310619..3310695,3329292..3329388,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3310619-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3329292-3329388:-1:exon
so has part: feature:3310619-3310695:-1:exon

XP_005673444.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3329292-3329388:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3310619-3310695:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X7
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQVLLASSFVPIYAGLRPVAYRGQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILRSTPRLP
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3310672..3310695,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3310672-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3310672-3310695:-1:exon

XP_020936532.1
type: Protein
SIO_000068: ncbiprotein

position:3310672:-1
position: 3310672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3310672-3310695:-1:exon

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_005673390.3
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334220..3334433,3335144..3335296,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368984))
location: region:3334220-3368984:-1
so has part: feature:3368820-3368984:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334220-3334433:-1:exon

position:3334220:-1
position: 3334220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3368984:-1
position: 3368984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3334220-3334433:-1:exon

position:3334433:-1
position: 3334433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_005673389.3
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334220..3334433,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368980))
location: region:3334220-3368980:-1
so has part: feature:3368820-3368980:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334220-3334433:-1:exon

position:3368980:-1
position: 3368980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368980:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3334220-3334433:-1:exon

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001160082.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 6 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001160082.1
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334250..3334433,3335144..3335296,3362571..3362706,3363312..3363406,3367492..3367676))
location: region:3334250-3367676:-1
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334250-3334433:-1:exon

position:3334250:-1
position: 3334250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3334250-3334433:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
inference: similar to AA sequence (same species):RefSeq:NP_001153554.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 precursor
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILLSMANLVRLHQALFPPNKRIMESLYQRGFDDAVKFLLKESWFEQNA
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334293..3334433,3335144..3335296,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3334293-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334293-3334433:-1:exon

NP_001153554.1
type: Protein
SIO_000068: ncbiprotein

position:3334293:-1
position: 3334293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3334293-3334433:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X5
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILLSMANLVRLHQALFPPNKRIMESLYQRGFDDAVKFLLKESWFEQNA
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334293..3334433,3335144..3335296,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3334293-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334293-3334433:-1:exon

XP_005673447.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3334293-3334433:-1:exon

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X3
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQVLLASSFVPIYAGLRPVAYRGQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILLSMANLVRLHQALFPPNKRIMESLYQRGFDDAVKFLLKESWFEQNA
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334293..3334433,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3334293-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334293-3334433:-1:exon

XP_005673446.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3334293-3334433:-1:exon

PNPLA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: PNPLA4
product: patatin like phospholipase domain containing 4, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_013985871.2
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334440..3334750,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367676,3368820..3368983))
location: region:3334440-3368983:-1
so has part: feature:3368820-3368983:-1:exon
so has part: feature:3367492-3367676:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334440-3334750:-1:exon

position:3334440:-1
position: 3334440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3368820-3368983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3367492-3367676:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3334440-3334750:-1:exon

position:3334750:-1
position: 3334750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PNPLA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: PNPLA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: patatin-like phospholipase domain-containing protein 4 isoform X6
translation: MKHINLSFAACGFLGIYHLGAASALCKHGKKLLKDVQAFAGASAGSLVASVLLTAPEKIEECNAFTYNFAEEIRRQWFGAVTPGYDFMGRLRSGMESILPPNAHELAHHRLHVSITSTRTRENYLVSSFPSREDLIQVLLASSFVPIYAGLRPVAYRGQKWIDGGFTDSLPILPGGRTVTISPFSGRLDISPQDKGQLGLYVGIANQHILSNSCQQEVILHAGDTG
SIO_010081: PNPLA4
subclass of: SO_0000673
so part of: PNPLA4
location: complement(join(3334700..3334750,3335144..3335296,3353186..3353251,3362571..3362706,3363312..3363406,3367492..3367671))
location: region:3334700-3367671:-1
so has part: feature:3367492-3367671:-1:exon
so has part: feature:3363312-3363406:-1:exon
so has part: feature:3362571-3362706:-1:exon
so has part: feature:3353186-3353251:-1:exon
so has part: feature:3335144-3335296:-1:exon
so has part: feature:3334700-3334750:-1:exon

XP_013841325.1
type: Protein
SIO_000068: ncbiprotein

position:3334700:-1
position: 3334700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3367492-3367671:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3363312-3363406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3362571-3362706:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3353186-3353251:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3335144-3335296:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3334700-3334750:-1:exon

LOC102165752
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC102165752
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3369026..3703800
location: region:3369026-3703800:1
so has part: feature:3369026-3703800:1:exon
subclass of: SO_0000011

102165752
type: Gene
SIO_000068: ncbigene

position:3369026:1
position: 3369026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3703800:1
position: 3703800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369026-3703800:1:exon

LOC102165752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102165752
product: uncharacterized LOC102165752, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002340940.1
SIO_010081: LOC102165752
subclass of: SO_0000673
so part of: LOC102165752
location: join(3369026..3370621,3383705..3383797,3689912..3690032,3702973..3703064,3703494..3703800)
location: region:3369026-3703800:1
so has part: feature:3369026-3370621:1:exon
so has part: feature:3383705-3383797:1:exon
so has part: feature:3689912-3690032:1:exon
so has part: feature:3702973-3703064:1:exon
so has part: feature:3703494-3703800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3369026-3370621:1:exon

position:3370621:1
position: 3370621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3383705-3383797:1:exon

position:3383705:1
position: 3383705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3383797:1
position: 3383797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3689912-3690032:1:exon

position:3689912:1
position: 3689912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3690032:1
position: 3690032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3702973-3703064:1:exon

position:3702973:1
position: 3702973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3703064:1
position: 3703064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3703494-3703800:1:exon

position:3703494:1
position: 3703494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102165752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102165752
product: uncharacterized LOC102165752, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002340939.1
SIO_010081: LOC102165752
subclass of: SO_0000673
so part of: LOC102165752
location: join(3369027..3370621,3383705..3383797,3689912..3690032,3702973..3703800)
location: region:3369027-3703800:1
so has part: feature:3369027-3370621:1:exon
so has part: feature:3383705-3383797:1:exon
so has part: feature:3689912-3690032:1:exon
so has part: feature:3702973-3703800:1:exon

position:3369027:1
position: 3369027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369027-3370621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3383705-3383797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3689912-3690032:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3702973-3703800:1:exon

LOC102165752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102165752
product: uncharacterized LOC102165752, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_001302519.2
SIO_010081: LOC102165752
subclass of: SO_0000673
so part of: LOC102165752
location: join(3369027..3370621,3383705..3383797,3464340..3465085)
location: region:3369027-3465085:1
so has part: feature:3369027-3370621:1:exon
so has part: feature:3383705-3383797:1:exon
so has part: feature:3464340-3465085:1:exon

position:3465085:1
position: 3465085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369027-3370621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3383705-3383797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3464340-3465085:1:exon

position:3464340:1
position: 3464340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102165752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102165752
product: uncharacterized LOC102165752, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XR_309177.3
SIO_010081: LOC102165752
subclass of: SO_0000673
so part of: LOC102165752
location: join(3369027..3370621,3383705..3383797,3405030..3408392)
location: region:3369027-3408392:1
so has part: feature:3369027-3370621:1:exon
so has part: feature:3383705-3383797:1:exon
so has part: feature:3405030-3408392:1:exon

position:3408392:1
position: 3408392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3369027-3370621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3383705-3383797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3405030-3408392:1:exon

position:3405030:1
position: 3405030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102165752
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102165752
product: uncharacterized LOC102165752, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_001302520.2
SIO_010081: LOC102165752
subclass of: SO_0000673
so part of: LOC102165752
location: join(3369027..3370621,3383705..3383797,3406381..3408392)
location: region:3369027-3408392:1
so has part: feature:3369027-3370621:1:exon
so has part: feature:3383705-3383797:1:exon
so has part: feature:3406381-3408392:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3369027-3370621:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3383705-3383797:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3406381-3408392:1:exon

position:3406381:1
position: 3406381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANOS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: ANOS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3807032..4014112)
location: region:3807032-4014112:-1
so has part: feature:3807032-4014112:-1:exon
subclass of: SO_0000010

100154011
type: Gene
SIO_000068: ncbigene

position:3807032:-1
position: 3807032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4014112:-1
position: 4014112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3807032-4014112:-1:exon

ANOS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: ANOS1
product: anosmin 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 54 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080958.1
SIO_010081: ANOS1
subclass of: SO_0000673
so part of: ANOS1
location: complement(join(3807032..3811366,3812648..3812795,3813817..3814037,3814691..3814862,3817141..3817235,3827191..3827337,3841274..3841418,3844678..3844883,3861658..3861787,3864950..3865134,3875749..3875971,3898480..3898542,3972645..3972692,4013736..4013750,4014107..4014112))
location: region:3807032-4014112:-1
so has part: feature:4014107-4014112:-1:exon
so has part: feature:4013736-4013750:-1:exon
so has part: feature:3972645-3972692:-1:exon
so has part: feature:3898480-3898542:-1:exon
so has part: feature:3875749-3875971:-1:exon
so has part: feature:3864950-3865134:-1:exon
so has part: feature:3861658-3861787:-1:exon
so has part: feature:3844678-3844883:-1:exon
so has part: feature:3841274-3841418:-1:exon
so has part: feature:3827191-3827337:-1:exon
so has part: feature:3817141-3817235:-1:exon
so has part: feature:3814691-3814862:-1:exon
so has part: feature:3813817-3814037:-1:exon
so has part: feature:3812648-3812795:-1:exon
so has part: feature:3807032-3811366:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4014107-4014112:-1:exon

position:4014107:-1
position: 4014107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4013736-4013750:-1:exon

position:4013736:-1
position: 4013736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4013750:-1
position: 4013750
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3972645-3972692:-1:exon

position:3972645:-1
position: 3972645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3972692:-1
position: 3972692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3898480-3898542:-1:exon

position:3898480:-1
position: 3898480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3898542:-1
position: 3898542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3875749-3875971:-1:exon

position:3875749:-1
position: 3875749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3875971:-1
position: 3875971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3864950-3865134:-1:exon

position:3864950:-1
position: 3864950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3865134:-1
position: 3865134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3861658-3861787:-1:exon

position:3861658:-1
position: 3861658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3861787:-1
position: 3861787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3844678-3844883:-1:exon

position:3844678:-1
position: 3844678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3844883:-1
position: 3844883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3841274-3841418:-1:exon

position:3841274:-1
position: 3841274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3841418:-1
position: 3841418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3827191-3827337:-1:exon

position:3827191:-1
position: 3827191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3827337:-1
position: 3827337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3817141-3817235:-1:exon

position:3817141:-1
position: 3817141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3817235:-1
position: 3817235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3814691-3814862:-1:exon

position:3814691:-1
position: 3814691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3814862:-1
position: 3814862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3813817-3814037:-1:exon

position:3813817:-1
position: 3813817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3814037:-1
position: 3814037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3812648-3812795:-1:exon

position:3812648:-1
position: 3812648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3812795:-1
position: 3812795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3807032-3811366:-1:exon

position:3811366:-1
position: 3811366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANOS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: ANOS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: anosmin-1 isoform X2
translation: MDHGNGENNGSLVWCQNHKQCSKCLEPCKASWDLRNQQCQSFCEPLFPKKNYECLTSCEFLKYILSVKQGDCPAPEKASGFAAACVESCEVDNECSGVKKCCSNGCGHTCQVPKTLYKGVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVIYVVQRRWNYGIHPSEDDATPWQTIAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSSKDPAAPPAPANLRLANSTVNSDGSVSVTMVWDLPEEPDIPVHHYKVFWSWTVSSKSLVPTKKKRRKTTEGSQNSVTLERLLPNCEYTVELQAIAYWGQTRLKSAKVSLQFTSTHAAHNKQQLGKTRKRVTPIQPPFQRRRPTSLLEMGAPFYQDNQLQAKVYWKKTEDPGVSRYHVQWSPEVCAHNESASLEASSALTQENYMILQDLSFACKYKVTVQPTRPKGRLKAETVFFTTPPCSALKGKSHKHVSCPGEAGHIHSRVQAKPENLSASFVVQDVSITGHFSWKMAKATLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPADHYVLTVPSLRPATLYRLEVQVLTAAGEGPATIRTFRTPDLPPSAAAAHRPHLKHQHAHHYKPPPERY
SIO_010081: ANOS1
subclass of: SO_0000673
so part of: ANOS1
location: complement(join(3811308..3811366,3812648..3812795,3813817..3814037,3814691..3814862,3817141..3817235,3827191..3827337,3841274..3841418,3844678..3844883,3861658..3861787,3864950..3865134,3875749..3875971,3898480..3898542,3972645..3972692,4013736..4013750,4014107..4014112))
location: region:3811308-4014112:-1
so has part: feature:4014107-4014112:-1:exon
so has part: feature:4013736-4013750:-1:exon
so has part: feature:3972645-3972692:-1:exon
so has part: feature:3898480-3898542:-1:exon
so has part: feature:3875749-3875971:-1:exon
so has part: feature:3864950-3865134:-1:exon
so has part: feature:3861658-3861787:-1:exon
so has part: feature:3844678-3844883:-1:exon
so has part: feature:3841274-3841418:-1:exon
so has part: feature:3827191-3827337:-1:exon
so has part: feature:3817141-3817235:-1:exon
so has part: feature:3814691-3814862:-1:exon
so has part: feature:3813817-3814037:-1:exon
so has part: feature:3812648-3812795:-1:exon
so has part: feature:3811308-3811366:-1:exon

XP_020936617.1
type: Protein
SIO_000068: ncbiprotein

position:3811308:-1
position: 3811308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4014107-4014112:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4013736-4013750:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3972645-3972692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3898480-3898542:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3875749-3875971:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3864950-3865134:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3861658-3861787:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3844678-3844883:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3841274-3841418:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3827191-3827337:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3817141-3817235:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3814691-3814862:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3813817-3814037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3812648-3812795:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3811308-3811366:-1:exon

LOC110257727
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257727
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4201994..4238132)
location: region:4201994-4238132:-1
so has part: feature:4201994-4238132:-1:exon
subclass of: SO_0000011

110257727
type: Gene
SIO_000068: ncbigene

position:4201994:-1
position: 4201994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4238132:-1
position: 4238132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4201994-4238132:-1:exon

LOC110257727
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257727
product: uncharacterized LOC110257727, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002340914.1
SIO_010081: LOC110257727
subclass of: SO_0000673
so part of: LOC110257727
location: complement(join(4201994..4202540,4212941..4212985,4238038..4238132))
location: region:4201994-4238132:-1
so has part: feature:4238038-4238132:-1:exon
so has part: feature:4212941-4212985:-1:exon
so has part: feature:4201994-4202540:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4238038-4238132:-1:exon

position:4238038:-1
position: 4238038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4212941-4212985:-1:exon

position:4212941:-1
position: 4212941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4212985:-1
position: 4212985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4201994-4202540:-1:exon

position:4202540:-1
position: 4202540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257727
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257727
product: uncharacterized LOC110257727, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002340913.1
SIO_010081: LOC110257727
subclass of: SO_0000673
so part of: LOC110257727
location: complement(join(4211735..4212985,4238038..4238132))
location: region:4211735-4238132:-1
so has part: feature:4238038-4238132:-1:exon
so has part: feature:4211735-4212985:-1:exon

position:4211735:-1
position: 4211735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4238038-4238132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4211735-4212985:-1:exon

LOC106506885
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC106506885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4431010..4459327)
location: region:4431010-4459327:-1
so has part: feature:4431010-4459327:-1:exon
subclass of: SO_0000011

106506885
type: Gene
SIO_000068: ncbigene

position:4431010:-1
position: 4431010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4459327:-1
position: 4459327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4431010-4459327:-1:exon

LOC106506885
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC106506885
product: uncharacterized LOC106506885, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002340917.1
SIO_010081: LOC106506885
subclass of: SO_0000673
so part of: LOC106506885
location: complement(join(4431010..4431701,4443400..4443526,4458300..4459327))
location: region:4431010-4459327:-1
so has part: feature:4458300-4459327:-1:exon
so has part: feature:4443400-4443526:-1:exon
so has part: feature:4431010-4431701:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4458300-4459327:-1:exon

position:4458300:-1
position: 4458300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4443400-4443526:-1:exon

position:4443400:-1
position: 4443400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4443526:-1
position: 4443526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4431010-4431701:-1:exon

position:4431701:-1
position: 4431701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC106506885
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC106506885
product: uncharacterized LOC106506885, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002340918.1
SIO_010081: LOC106506885
subclass of: SO_0000673
so part of: LOC106506885
location: complement(join(4431010..4431701,4443400..4443526,4448684..4449465))
location: region:4431010-4449465:-1
so has part: feature:4448684-4449465:-1:exon
so has part: feature:4443400-4443526:-1:exon
so has part: feature:4431010-4431701:-1:exon

position:4449465:-1
position: 4449465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4448684-4449465:-1:exon

position:4448684:-1
position: 4448684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4443400-4443526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4431010-4431701:-1:exon

LOC100624648
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100624648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4582402..4666308
location: region:4582402-4666308:1
so has part: feature:4582402-4666308:1:exon
subclass of: SO_0000010

100624648
type: Gene
SIO_000068: ncbigene

position:4582402:1
position: 4582402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4666308:1
position: 4666308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4582402-4666308:1:exon

LOC100624648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624648
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 53 ESTs, 35 long SRA reads, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 180 samples with support for all annotated introns
transcript id: XM_021080987.1
SIO_010081: LOC100624648
subclass of: SO_0000673
so part of: LOC100624648
location: join(4582402..4583822,4600241..4600348,4629198..4629343,4632686..4632953,4635013..4635145,4635435..4635576,4636274..4636337,4636461..4636558,4640401..4640461,4648239..4648360,4652845..4652919,4653345..4653472,4655168..4655333,4662124..4662225,4663104..4666308)
location: region:4582402-4666308:1
so has part: feature:4582402-4583822:1:exon
so has part: feature:4600241-4600348:1:exon
so has part: feature:4629198-4629343:1:exon
so has part: feature:4632686-4632953:1:exon
so has part: feature:4635013-4635145:1:exon
so has part: feature:4635435-4635576:1:exon
so has part: feature:4636274-4636337:1:exon
so has part: feature:4636461-4636558:1:exon
so has part: feature:4640401-4640461:1:exon
so has part: feature:4648239-4648360:1:exon
so has part: feature:4652845-4652919:1:exon
so has part: feature:4653345-4653472:1:exon
so has part: feature:4655168-4655333:1:exon
so has part: feature:4662124-4662225:1:exon
so has part: feature:4663104-4666308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4582402-4583822:1:exon

position:4583822:1
position: 4583822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4600241-4600348:1:exon

position:4600241:1
position: 4600241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4600348:1
position: 4600348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4629198-4629343:1:exon

position:4629198:1
position: 4629198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4629343:1
position: 4629343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4632686-4632953:1:exon

position:4632686:1
position: 4632686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4632953:1
position: 4632953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4635013-4635145:1:exon

position:4635013:1
position: 4635013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4635145:1
position: 4635145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4635435-4635576:1:exon

position:4635435:1
position: 4635435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4635576:1
position: 4635576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4636274-4636337:1:exon

position:4636274:1
position: 4636274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4636337:1
position: 4636337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4636461-4636558:1:exon

position:4636461:1
position: 4636461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4636558:1
position: 4636558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4640401-4640461:1:exon

position:4640401:1
position: 4640401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4640461:1
position: 4640461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4648239-4648360:1:exon

position:4648239:1
position: 4648239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4648360:1
position: 4648360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4652845-4652919:1:exon

position:4652845:1
position: 4652845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4652919:1
position: 4652919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4653345-4653472:1:exon

position:4653345:1
position: 4653345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4653472:1
position: 4653472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4655168-4655333:1:exon

position:4655168:1
position: 4655168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4655333:1
position: 4655333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4662124-4662225:1:exon

position:4662124:1
position: 4662124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4662225:1
position: 4662225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4663104-4666308:1:exon

position:4663104:1
position: 4663104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100624648
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624648
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 ESTs, 31 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 97 samples with support for all annotated introns
transcript id: XM_003360224.5
SIO_010081: LOC100624648
subclass of: SO_0000673
so part of: LOC100624648
location: join(4582402..4583822,4629198..4629343,4632686..4632953,4635013..4635145,4635435..4635576,4636274..4636337,4636461..4636558,4640401..4640461,4648239..4648360,4652845..4652919,4653345..4653472,4655168..4655333,4662124..4662225,4663104..4666308)
location: region:4582402-4666308:1
so has part: feature:4582402-4583822:1:exon
so has part: feature:4629198-4629343:1:exon
so has part: feature:4632686-4632953:1:exon
so has part: feature:4635013-4635145:1:exon
so has part: feature:4635435-4635576:1:exon
so has part: feature:4636274-4636337:1:exon
so has part: feature:4636461-4636558:1:exon
so has part: feature:4640401-4640461:1:exon
so has part: feature:4648239-4648360:1:exon
so has part: feature:4652845-4652919:1:exon
so has part: feature:4653345-4653472:1:exon
so has part: feature:4655168-4655333:1:exon
so has part: feature:4662124-4662225:1:exon
so has part: feature:4663104-4666308:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4582402-4583822:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629198-4629343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4632686-4632953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4635013-4635145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4635435-4635576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4636274-4636337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4636461-4636558:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4640401-4640461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4648239-4648360:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4652845-4652919:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4653345-4653472:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4655168-4655333:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4662124-4662225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4663104-4666308:1:exon

LOC100624648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X isoform X1
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASAAAAAAAAAAAATAAPAAPAAAAAVSQQNPPKNGEATVNGEENGAHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC100624648
subclass of: SO_0000673
so part of: LOC100624648
location: join(4600291..4600348,4629198..4629343,4632686..4632953,4635013..4635145,4635435..4635576,4636274..4636337,4636461..4636558,4640401..4640461,4648239..4648360,4652845..4652919,4653345..4653472,4655168..4655333,4662124..4662225,4663104..4663130)
location: region:4600291-4663130:1
so has part: feature:4600291-4600348:1:exon
so has part: feature:4629198-4629343:1:exon
so has part: feature:4632686-4632953:1:exon
so has part: feature:4635013-4635145:1:exon
so has part: feature:4635435-4635576:1:exon
so has part: feature:4636274-4636337:1:exon
so has part: feature:4636461-4636558:1:exon
so has part: feature:4640401-4640461:1:exon
so has part: feature:4648239-4648360:1:exon
so has part: feature:4652845-4652919:1:exon
so has part: feature:4653345-4653472:1:exon
so has part: feature:4655168-4655333:1:exon
so has part: feature:4662124-4662225:1:exon
so has part: feature:4663104-4663130:1:exon

XP_020936646.1
type: Protein
SIO_000068: ncbiprotein

position:4600291:1
position: 4600291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4663130:1
position: 4663130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4600291-4600348:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4629198-4629343:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4632686-4632953:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4635013-4635145:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4635435-4635576:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4636274-4636337:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4636461-4636558:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4640401-4640461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4648239-4648360:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4652845-4652919:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4653345-4653472:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4655168-4655333:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4662124-4662225:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4663104-4663130:1:exon

LOC100624648
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624648
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X isoform X2
translation: MPDVVQTRQQAFREKLAQQQASAAAAAAAAAAAATAAPAAPAAAAAVSQQNPPKNGEATVNGEENGAHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC100624648
subclass of: SO_0000673
so part of: LOC100624648
location: join(4632743..4632953,4635013..4635145,4635435..4635576,4636274..4636337,4636461..4636558,4640401..4640461,4648239..4648360,4652845..4652919,4653345..4653472,4655168..4655333,4662124..4662225,4663104..4663130)
location: region:4632743-4663130:1
so has part: feature:4632743-4632953:1:exon
so has part: feature:4635013-4635145:1:exon
so has part: feature:4635435-4635576:1:exon
so has part: feature:4636274-4636337:1:exon
so has part: feature:4636461-4636558:1:exon
so has part: feature:4640401-4640461:1:exon
so has part: feature:4648239-4648360:1:exon
so has part: feature:4652845-4652919:1:exon
so has part: feature:4653345-4653472:1:exon
so has part: feature:4655168-4655333:1:exon
so has part: feature:4662124-4662225:1:exon
so has part: feature:4663104-4663130:1:exon

XP_003360272.5
type: Protein
SIO_000068: ncbiprotein

position:4632743:1
position: 4632743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4632743-4632953:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4635013-4635145:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4635435-4635576:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4636274-4636337:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4636461-4636558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4640401-4640461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4648239-4648360:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4652845-4652919:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4653345-4653472:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4655168-4655333:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4662124-4662225:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663104-4663130:1:exon

GPR143
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: GPR143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4669764..4704304)
location: region:4669764-4704304:-1
so has part: feature:4669764-4704304:-1:exon
subclass of: SO_0000010

100624736
type: Gene
SIO_000068: ncbigene

position:4669764:-1
position: 4669764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4704304:-1
position: 4704304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4669764-4704304:-1:exon

GPR143
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: GPR143
product: G protein-coupled receptor 143, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_003360225.4
SIO_010081: GPR143
subclass of: SO_0000673
so part of: GPR143
location: complement(join(4669764..4670194,4683987..4684227,4685462..4685579,4686743..4686851,4689028..4689137,4691350..4691442,4697680..4697774,4698852..4698961,4703921..4704304))
location: region:4669764-4704304:-1
so has part: feature:4703921-4704304:-1:exon
so has part: feature:4698852-4698961:-1:exon
so has part: feature:4697680-4697774:-1:exon
so has part: feature:4691350-4691442:-1:exon
so has part: feature:4689028-4689137:-1:exon
so has part: feature:4686743-4686851:-1:exon
so has part: feature:4685462-4685579:-1:exon
so has part: feature:4683987-4684227:-1:exon
so has part: feature:4669764-4670194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4703921-4704304:-1:exon

position:4703921:-1
position: 4703921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4698852-4698961:-1:exon

position:4698852:-1
position: 4698852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4698961:-1
position: 4698961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4697680-4697774:-1:exon

position:4697680:-1
position: 4697680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4697774:-1
position: 4697774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4691350-4691442:-1:exon

position:4691350:-1
position: 4691350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4691442:-1
position: 4691442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4689028-4689137:-1:exon

position:4689028:-1
position: 4689028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4689137:-1
position: 4689137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4686743-4686851:-1:exon

position:4686743:-1
position: 4686743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4686851:-1
position: 4686851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4685462-4685579:-1:exon

position:4685462:-1
position: 4685462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4685579:-1
position: 4685579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4683987-4684227:-1:exon

position:4683987:-1
position: 4683987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4684227:-1
position: 4684227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4669764-4670194:-1:exon

position:4670194:-1
position: 4670194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPR143
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: GPR143
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: G-protein coupled receptor 143 isoform X2
translation: MASPRLGTFCCPTRDAATELVLSFQPRAFHALCLGSGALRLALGLLQLLPRRRPAGPGVPSASPPGSSRAPASACILRAAAACDLLGCLGIIVRSSVWLGFPSFVDHISDVNGTDVWPAAFCVGTATWIQLLYSACFWWLFCYAVDAYLVIRRSAGLSTILLYHMMAWGLAALLCVEGAFMLYYPSMARCDRGLEHAIPHYVTTYFPLLLVLVANPILFRKTVTAVASLLKGRQGVYTENERRMGAVIKTRFFKIMLVFIICWMSNIINESLLFYLEMQPDISGASLKQVRIAAKTTWFIMGILNPAQGFLLSLAFYGWTGCSVDFQSPRKEIQWDSMTTSAAERAQPSPGGSREPRESPAGGKVRTGGHTSDEALSLLSEGSDASTIEIHITGVSRNGNDVGSVPKAQGDL
SIO_010081: GPR143
subclass of: SO_0000673
so part of: GPR143
location: complement(join(4670100..4670194,4683987..4684227,4685462..4685579,4686743..4686851,4689028..4689137,4691350..4691442,4697680..4697774,4698852..4698961,4703921..4704188))
location: region:4670100-4704188:-1
so has part: feature:4703921-4704188:-1:exon
so has part: feature:4698852-4698961:-1:exon
so has part: feature:4697680-4697774:-1:exon
so has part: feature:4691350-4691442:-1:exon
so has part: feature:4689028-4689137:-1:exon
so has part: feature:4686743-4686851:-1:exon
so has part: feature:4685462-4685579:-1:exon
so has part: feature:4683987-4684227:-1:exon
so has part: feature:4670100-4670194:-1:exon

XP_003360273.2
type: Protein
SIO_000068: ncbiprotein

position:4670100:-1
position: 4670100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4704188:-1
position: 4704188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4703921-4704188:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4698852-4698961:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4697680-4697774:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4691350-4691442:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4689028-4689137:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686743-4686851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4685462-4685579:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4683987-4684227:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4670100-4670194:-1:exon

SHROOM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: SHROOM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4753733..4785766
location: region:4753733-4785766:1
so has part: feature:4753733-4785766:1:exon
subclass of: SO_0000010

100522965
type: Gene
SIO_000068: ncbigene

position:4753733:1
position: 4753733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4785766:1
position: 4785766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4753733-4785766:1:exon

SHROOM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: SHROOM2
product: shroom family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080959.1
SIO_010081: SHROOM2
subclass of: SO_0000673
so part of: SHROOM2
location: join(4753733..4753801,4758676..4758827,4773930..4774061,4779870..4782114,4783693..4785766)
location: region:4753733-4785766:1
so has part: feature:4753733-4753801:1:exon
so has part: feature:4758676-4758827:1:exon
so has part: feature:4773930-4774061:1:exon
so has part: feature:4779870-4782114:1:exon
so has part: feature:4783693-4785766:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4753733-4753801:1:exon

position:4753801:1
position: 4753801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4758676-4758827:1:exon

position:4758676:1
position: 4758676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4758827:1
position: 4758827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4773930-4774061:1:exon

position:4773930:1
position: 4773930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4774061:1
position: 4774061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4779870-4782114:1:exon

position:4779870:1
position: 4779870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4782114:1
position: 4782114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4783693-4785766:1:exon

position:4783693:1
position: 4783693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHROOM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: SHROOM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Shroom2 isoform X4
translation: MDAGAGSSSFYLPAPELFVLGMQIEEGSKAAAVGKLLAGDEIVGINDVGLSGFRQEAICLVKGSHKTLKLVVKRRNELSWRPHSWHATKFSDGHPESSTSSLSSSSTCPAWPGRHHASSSSQDLSGSAWEQTNLQRASGHFSSLGSVDSLDQPAQSSPSGRLSAAKSNSSIDHLGGPSKRDSAYGSFSTSSSTPDHTLPKADASSAENILYKVGLWEASAAGGGRQGLTAGDPQGVEERLGCFPPRVPCDSSRSPRPENSAEPKLAASGRSTFGPVWYVPEKKKAPSSPPPPPPPLRRDSFAATKSHEKTQGPFAEAATSQHFPGLVGAQAHGDWRPEVAEHLQRPGPANDARRAGGSGWVPGAYLDYGWPPCDSGAPSRLQASLSSTDVRCPQASYRCQHPRHSSDESPFCREGPRATTWLREQPPAEGFQDDSPTQVGWPSAADRKGDGGAQSRYYCVTSRRCLQGGAPDAQPRSYPSGFEGAPGARQRGRAMPADRAAGATELPSGSLLDKASLKKVAGDFTWADQGGGEICPLQTPMLHSLTREGARRPEPSFDGAAERLALEAPAGKPMRRSDRFATTLRNEIQLRRARLQKSRSTATLAGPGAEEEEEEEEEEAEVRGWGAHQAGGAGTAPEATVTSSYKDHLKEAQARVLRATSFRRRDLEPSHVDPDTGPRVREVAPARPPSCATSGGGSALPAPRIGGRRRFTAAQKLKSYSEPEKMNEVGLAGDDPPRRYPGPPDETVRTFADRWKFFEETSKPTGQRPGRRPGPCGFPKEKPERPQTAGPGNGGKAGRSDPPQRLGTFAEYQASWREQRKAPEARSAGRYHSADDILEVGLDQQERPPYIHERSRSSPSTDLYKQEASVDLRREAEEPREQRELFSAVLAEEGRPPQR
SIO_010081: SHROOM2
subclass of: SO_0000673
so part of: SHROOM2
location: join(4753733..4753801,4758676..4758827,4773930..4774061,4779870..4782114,4783693..4783794)
location: region:4753733-4783794:1
so has part: feature:4753733-4753801:1:exon
so has part: feature:4758676-4758827:1:exon
so has part: feature:4773930-4774061:1:exon
so has part: feature:4779870-4782114:1:exon
so has part: feature:4783693-4783794:1:exon

XP_020936618.1
type: Protein
SIO_000068: ncbiprotein

position:4783794:1
position: 4783794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4753733-4753801:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4758676-4758827:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4773930-4774061:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4779870-4782114:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4783693-4783794:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 4791972..4841971
location: region:4791972-4841971:1
so has part: feature:4791972-4841971:1:region

position:4791972:1
position: 4791972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4841971:1
position: 4841971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4791972-4841971:1:region

LOC110257901
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4963937..4972156
location: region:4963937-4972156:1
so has part: feature:4963937-4972156:1:exon
subclass of: SO_0000011

110257901
type: Gene
SIO_000068: ncbigene

position:4963937:1
position: 4963937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4972156:1
position: 4972156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4963937-4972156:1:exon

LOC110257901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257901
product: uncharacterized LOC110257901
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 5 long SRA reads, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002340911.1
SIO_010081: LOC110257901
subclass of: SO_0000673
so part of: LOC110257901
location: join(4963937..4965617,4966061..4972156)
location: region:4963937-4972156:1
so has part: feature:4963937-4965617:1:exon
so has part: feature:4966061-4972156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4963937-4965617:1:exon

position:4965617:1
position: 4965617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4966061-4972156:1:exon

position:4966061:1
position: 4966061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257900
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4965886..4992529)
location: region:4965886-4992529:-1
so has part: feature:4965886-4992529:-1:exon
subclass of: SO_0000010

110257900
type: Gene
SIO_000068: ncbigene

position:4965886:-1
position: 4965886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4992529:-1
position: 4992529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4965886-4992529:-1:exon

LOC110257900
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9823
gene: LOC110257900
product: cytokine receptor-like factor 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XR_002340910.1
SIO_010081: LOC110257900
so part of: LOC110257900
location: complement(join(4965886..4967681,4967931..4973556,4976688..4976772,4979369..4979474,4980705..4980867,4982875..4983008,4984342..4984505,4986710..4986809,4992169..4992529))
location: region:4965886-4992529:-1
so has part: feature:4992169-4992529:-1:exon
so has part: feature:4986710-4986809:-1:exon
so has part: feature:4984342-4984505:-1:exon
so has part: feature:4982875-4983008:-1:exon
so has part: feature:4980705-4980867:-1:exon
so has part: feature:4979369-4979474:-1:exon
so has part: feature:4976688-4976772:-1:exon
so has part: feature:4967931-4973556:-1:exon
so has part: feature:4965886-4967681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4992169-4992529:-1:exon

position:4992169:-1
position: 4992169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4986710-4986809:-1:exon

position:4986710:-1
position: 4986710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4986809:-1
position: 4986809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4984342-4984505:-1:exon

position:4984342:-1
position: 4984342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4984505:-1
position: 4984505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4982875-4983008:-1:exon

position:4982875:-1
position: 4982875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4983008:-1
position: 4983008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4980705-4980867:-1:exon

position:4980705:-1
position: 4980705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4980867:-1
position: 4980867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4979369-4979474:-1:exon

position:4979369:-1
position: 4979369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4979474:-1
position: 4979474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4976688-4976772:-1:exon

position:4976688:-1
position: 4976688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4976772:-1
position: 4976772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4967931-4973556:-1:exon

position:4967931:-1
position: 4967931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4973556:-1
position: 4973556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4965886-4967681:-1:exon

position:4967681:-1
position: 4967681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257900
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257900
product: cytokine receptor-like factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 20 long SRA reads, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_021080904.1
SIO_010081: LOC110257900
subclass of: SO_0000673
so part of: LOC110257900
location: complement(join(4965886..4973556,4976688..4976772,4979369..4979474,4980705..4980867,4982875..4983008,4984342..4984505,4986710..4986809,4992169..4992529))
location: region:4965886-4992529:-1
so has part: feature:4992169-4992529:-1:exon
so has part: feature:4986710-4986809:-1:exon
so has part: feature:4984342-4984505:-1:exon
so has part: feature:4982875-4983008:-1:exon
so has part: feature:4980705-4980867:-1:exon
so has part: feature:4979369-4979474:-1:exon
so has part: feature:4976688-4976772:-1:exon
so has part: feature:4965886-4973556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4992169-4992529:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4986710-4986809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4984342-4984505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4982875-4983008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4980705-4980867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4979369-4979474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4976688-4976772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4965886-4973556:-1:exon

LOC110257900
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257900
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor-like factor 2
translation: MRCVFLPWVTAAVLLLGHLSASGETGPGALPLQIINFNFETVQVTWNATEYSGANWTFFYKLRDNEDYRECSNYTLRQGSTTGCILAVEKDELLYFSIRHGTDSLLDKTQWISSYLKPRSPRGLTFQWRQGAVTVTCSDLRYRGLLYEIQHKTTFDAEWQSNEAKTCNVTLSDLDAEKCYFFRARVKTLESSYGPDTYPSDWSQVMHQQQGKLRDSCQDKRLSPNFLLITGMIVFLTVSLLFLSLWKLQRIKKVLMPSVPDPKSTFSGLFESHQGNFQEWIKDTQNVTHLNKTEEREQACILEEAVVVQLAEAERPKTMPNSPMGLQMGEEEAAGDPCRLPRQPPQGRQVASLQGFTFVMSDNSYMML
SIO_010081: LOC110257900
subclass of: SO_0000673
so part of: LOC110257900
location: complement(join(4973284..4973556,4976688..4976772,4979369..4979474,4980705..4980867,4982875..4983008,4984342..4984505,4986710..4986809,4992169..4992250))
location: region:4973284-4992250:-1
so has part: feature:4992169-4992250:-1:exon
so has part: feature:4986710-4986809:-1:exon
so has part: feature:4984342-4984505:-1:exon
so has part: feature:4982875-4983008:-1:exon
so has part: feature:4980705-4980867:-1:exon
so has part: feature:4979369-4979474:-1:exon
so has part: feature:4976688-4976772:-1:exon
so has part: feature:4973284-4973556:-1:exon

XP_020936563.1
type: Protein
SIO_000068: ncbiprotein

position:4973284:-1
position: 4973284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4992250:-1
position: 4992250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4992169-4992250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4986710-4986809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4984342-4984505:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4982875-4983008:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4980705-4980867:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4979369-4979474:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4976688-4976772:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4973284-4973556:-1:exon

LOC110257903
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5019990..5035462
location: region:5019990-5035462:1
so has part: feature:5019990-5035462:1:exon
subclass of: SO_0000010

110257903
type: Gene
SIO_000068: ncbigene

position:5019990:1
position: 5019990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5035462:1
position: 5035462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5019990-5035462:1:exon

LOC110257903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257903
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021080906.1
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5019990..5020233,5023156..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5033097..5033232,5035326..5035462)
location: region:5019990-5035462:1
so has part: feature:5019990-5020233:1:exon
so has part: feature:5023156-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035462:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5019990-5020233:1:exon

position:5020233:1
position: 5020233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5023156-5023317:1:exon

position:5023156:1
position: 5023156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5023317:1
position: 5023317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

position:5023818:1
position: 5023818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5023963:1
position: 5023963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

position:5026015:1
position: 5026015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5026138:1
position: 5026138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

position:5028620:1
position: 5028620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5028749:1
position: 5028749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

position:5028846:1
position: 5028846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5029018:1
position: 5029018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

position:5030860:1
position: 5030860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5030993:1
position: 5030993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5033097-5033232:1:exon

position:5033097:1
position: 5033097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5033232:1
position: 5033232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5035326-5035462:1:exon

position:5035326:1
position: 5035326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257903
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_021080905.1
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5019991..5020233,5023156..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5031806..5031835,5033097..5033232,5035326..5035462)
location: region:5019991-5035462:1
so has part: feature:5019991-5020233:1:exon
so has part: feature:5023156-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5031806-5031835:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035462:1:exon

position:5019991:1
position: 5019991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5019991-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023156-5023317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5031806-5031835:1:exon

position:5031806:1
position: 5031806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5031835:1
position: 5031835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5035326-5035462:1:exon

LOC110257903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257903
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 long SRA read, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_021080908.1
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5019992..5020233,5023234..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5031806..5031835,5033097..5033232,5035326..5035461)
location: region:5019992-5035461:1
so has part: feature:5019992-5020233:1:exon
so has part: feature:5023234-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5031806-5031835:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035461:1:exon

position:5019992:1
position: 5019992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5035461:1
position: 5035461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5019992-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023234-5023317:1:exon

position:5023234:1
position: 5023234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5031806-5031835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5035326-5035461:1:exon

LOC110257903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257903
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 4 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_021080910.1
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5020004..5020233,5023216..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5033097..5033232,5035326..5035458)
location: region:5020004-5035458:1
so has part: feature:5020004-5020233:1:exon
so has part: feature:5023216-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035458:1:exon

position:5020004:1
position: 5020004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5035458:1
position: 5035458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5020004-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023216-5023317:1:exon

position:5023216:1
position: 5023216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5035326-5035458:1:exon

LOC110257903
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257903
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 15 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_021080907.1
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5020006..5020233,5023216..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5031806..5031835,5033097..5033232,5035326..5035457)
location: region:5020006-5035457:1
so has part: feature:5020006-5020233:1:exon
so has part: feature:5023216-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5031806-5031835:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035457:1:exon

position:5020006:1
position: 5020006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5035457:1
position: 5035457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5020006-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023216-5023317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5031806-5031835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5035326-5035457:1:exon

LOC110257903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like isoform X1
translation: MQSVRQLSDEEETCQRAQMWGQRDTARRNAGVAAKKKKRLPHEIGFSLLPVLAHPAGCPRRLLTTALLLSLLLDPAILLLREHQDLPALDQNASLHVTFDPKTMTLRWDCRENVTSGECLMTTHKENSPVKKGIKGKECRCTFQDRSLHGGVSFTVKVNIDQRWISETLVYSNPGVEGTAAQNFSCLIYNADFMNCTWAKGQAAPNDIQYFLYIRDSKKKIERECPRYLQDSGTHVGCHLQNISGLSFYSYFLVNGTSQKSGIQFFDSVLMLKEIERYNPPNNITVYCNESHCFIQWEKPRTRKTLSDREFQYQLDIQRQSNIRRSENQLIVVSGDLGNKYNFPSPHPRATHILKMRTADARRAEWGTWSQPVQFGSEELESSLVHVYVLVVLGTLVCGLMLGCLFKR
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5020143..5020233,5023156..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5031806..5031835,5033097..5033232,5035326..5035426)
location: region:5020143-5035426:1
so has part: feature:5020143-5020233:1:exon
so has part: feature:5023156-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5031806-5031835:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035426:1:exon

XP_020936564.1
type: Protein
SIO_000068: ncbiprotein

position:5020143:1
position: 5020143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5035426:1
position: 5035426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5020143-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023156-5023317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5031806-5031835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5035326-5035426:1:exon

LOC110257903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like isoform X2
translation: MQSVRQLSDEEETCQRAQMWGQRDTARRNAGVAAKKKKRLPHEIGFSLLPVLAHPAGCPRRLLTTALLLSLLLDPAILLLREHQDLPALDQNASLHVTFDPKTMTLRWDCRENVTSGECLMTTHKENSPVKKGIKGKECRCTFQDRSLHGGVSFTVKVNIDQRWISETLVYSNPGVEGTAAQNFSCLIYNADFMNCTWAKGQAAPNDIQYFLYIRDSKKKIERECPRYLQDSGTHVGCHLQNISGLSFYSYFLVNGTSQKSGIQFFDSVLMLKEIERYNPPNNITVYCNESHCFIQWEKPRTRKTLSDREFQYQLDIQRQIVVSGDLGNKYNFPSPHPRATHILKMRTADARRAEWGTWSQPVQFGSEELESSLVHVYVLVVLGTLVCGLMLGCLFKR
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5020143..5020233,5023156..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5033097..5033232,5035326..5035426)
location: region:5020143-5035426:1
so has part: feature:5020143-5020233:1:exon
so has part: feature:5023156-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035426:1:exon

XP_020936565.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5020143-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023156-5023317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5035326-5035426:1:exon

LOC110257903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like isoform X3
translation: MQSVRQLSDEEETCQRAQMWGQRDTARRNAVLAHPAGCPRRLLTTALLLSLLLDPAILLLREHQDLPALDQNASLHVTFDPKTMTLRWDCRENVTSGECLMTTHKENSPVKKGIKGKECRCTFQDRSLHGGVSFTVKVNIDQRWISETLVYSNPGVEGTAAQNFSCLIYNADFMNCTWAKGQAAPNDIQYFLYIRDSKKKIERECPRYLQDSGTHVGCHLQNISGLSFYSYFLVNGTSQKSGIQFFDSVLMLKEIERYNPPNNITVYCNESHCFIQWEKPRTRKTLSDREFQYQLDIQRQSNIRRSENQLIVVSGDLGNKYNFPSPHPRATHILKMRTADARRAEWGTWSQPVQFGSEELESSLVHVYVLVVLGTLVCGLMLGCLFKR
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5020143..5020233,5023216..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5031806..5031835,5033097..5033232,5035326..5035426)
location: region:5020143-5035426:1
so has part: feature:5020143-5020233:1:exon
so has part: feature:5023216-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5031806-5031835:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035426:1:exon

XP_020936566.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5020143-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023216-5023317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5031806-5031835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5035326-5035426:1:exon

LOC110257903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like isoform X5
translation: MQSVRQLSDEEETCQRAQMWGQRDTARRNAVLAHPAGCPRRLLTTALLLSLLLDPAILLLREHQDLPALDQNASLHVTFDPKTMTLRWDCRENVTSGECLMTTHKENSPVKKGIKGKECRCTFQDRSLHGGVSFTVKVNIDQRWISETLVYSNPGVEGTAAQNFSCLIYNADFMNCTWAKGQAAPNDIQYFLYIRDSKKKIERECPRYLQDSGTHVGCHLQNISGLSFYSYFLVNGTSQKSGIQFFDSVLMLKEIERYNPPNNITVYCNESHCFIQWEKPRTRKTLSDREFQYQLDIQRQIVVSGDLGNKYNFPSPHPRATHILKMRTADARRAEWGTWSQPVQFGSEELESSLVHVYVLVVLGTLVCGLMLGCLFKR
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5020143..5020233,5023216..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5033097..5033232,5035326..5035426)
location: region:5020143-5035426:1
so has part: feature:5020143-5020233:1:exon
so has part: feature:5023216-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035426:1:exon

XP_020936569.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5020143-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023216-5023317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5035326-5035426:1:exon

LOC110257903
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257903
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like isoform X4
translation: MQSVRQLSDEEETCQRAQMWGQRDTARRNAGCPRRLLTTALLLSLLLDPAILLLREHQDLPALDQNASLHVTFDPKTMTLRWDCRENVTSGECLMTTHKENSPVKKGIKGKECRCTFQDRSLHGGVSFTVKVNIDQRWISETLVYSNPGVEGTAAQNFSCLIYNADFMNCTWAKGQAAPNDIQYFLYIRDSKKKIERECPRYLQDSGTHVGCHLQNISGLSFYSYFLVNGTSQKSGIQFFDSVLMLKEIERYNPPNNITVYCNESHCFIQWEKPRTRKTLSDREFQYQLDIQRQSNIRRSENQLIVVSGDLGNKYNFPSPHPRATHILKMRTADARRAEWGTWSQPVQFGSEELESSLVHVYVLVVLGTLVCGLMLGCLFKR
SIO_010081: LOC110257903
subclass of: SO_0000673
so part of: LOC110257903
location: join(5020143..5020233,5023234..5023317,5023818..5023963,5026015..5026138,5028620..5028749,5028846..5029018,5030860..5030993,5031806..5031835,5033097..5033232,5035326..5035426)
location: region:5020143-5035426:1
so has part: feature:5020143-5020233:1:exon
so has part: feature:5023234-5023317:1:exon
so has part: feature:5023818-5023963:1:exon
so has part: feature:5026015-5026138:1:exon
so has part: feature:5028620-5028749:1:exon
so has part: feature:5028846-5029018:1:exon
so has part: feature:5030860-5030993:1:exon
so has part: feature:5031806-5031835:1:exon
so has part: feature:5033097-5033232:1:exon
so has part: feature:5035326-5035426:1:exon

XP_020936567.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5020143-5020233:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5023234-5023317:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5023818-5023963:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5026015-5026138:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5028620-5028749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5028846-5029018:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5030860-5030993:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5031806-5031835:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5033097-5033232:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5035326-5035426:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 5037966..5087965
location: region:5037966-5087965:1
so has part: feature:5037966-5087965:1:region

position:5037966:1
position: 5037966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5087965:1
position: 5087965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5037966-5087965:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 5186437..5236436
location: region:5186437-5236436:1
so has part: feature:5186437-5236436:1:region

position:5186437:1
position: 5186437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5236436:1
position: 5236436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5186437-5236436:1:region

DHRSX
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: DHRSX
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5248447..>5374873)
location: region:5248447-5374873:-1
so has part: feature:5248447-5374873:-1:exon
subclass of: SO_0000010

110255319
type: Gene
SIO_000068: ncbigene

position:5248447:-1
position: 5248447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5374873:-1
position: 5374873
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5248447-5374873:-1:exon

DHRSX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: DHRSX
product: dehydrogenase/reductase X-linked
inference: similar to RNA sequence, mRNA (same species):INSD:AK401008.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: added 184 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs, 12 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_021080887.1
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(5248447..5248917,5267775..5267982,5282958..5283165,5296949..5297050,5365521..5365589,5374766..>5374873))
location: region:5248447-5374873:-1
so has part: feature:5374766-5374873:-1:exon
so has part: feature:5365521-5365589:-1:exon
so has part: feature:5296949-5297050:-1:exon
so has part: feature:5282958-5283165:-1:exon
so has part: feature:5267775-5267982:-1:exon
so has part: feature:5248447-5248917:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5374766-5374873:-1:exon

position:5374766:-1
position: 5374766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5365521-5365589:-1:exon

position:5365521:-1
position: 5365521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5365589:-1
position: 5365589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5296949-5297050:-1:exon

position:5296949:-1
position: 5296949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5297050:-1
position: 5297050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5282958-5283165:-1:exon

position:5282958:-1
position: 5282958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5283165:-1
position: 5283165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5267775-5267982:-1:exon

position:5267775:-1
position: 5267775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5267982:-1
position: 5267982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5248447-5248917:-1:exon

position:5248917:-1
position: 5248917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHRSX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: DHRSX
inference: similar to RNA sequence, mRNA (same species):INSD:AK401008.1
exception: annotated by transcript or proteomic data
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: added 109 bases not found in genome assembly; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: dehydrogenase/reductase SDR family member on chromosome X
translation: FPPQPGRVAIVTGGTEGIGFATAKHLARLGMHVIIAGNNDSKAREAVRKIREETLNDKVEFLYCDLASMKSIRQFVQKFKMKKIPLHVLVNNAGVMMVPQRETEDGFEEHFGVNYLGHFLLTHLLLDDLQASGSPGRSARVVTVSSATHYVGELDLDDLQSSGGYSPHGAYARSKLALVLFSHRLQVLLEAKGSPVTANVADPGVVNTDLYRHVFWGTRLLKKLFGWWFFKTPDEGAWTSVYAAVSPALEGVGGRYLYNEKEAKSLAITYDPKLQRQLWARSCQMTGIADMTRDTLWG
SIO_010081: DHRSX
subclass of: SO_0000673
so part of: DHRSX
location: complement(join(5248714..5248917,5267775..5267982,5282958..5283165,5296949..5297050,5365521..5365589,5374766..>5374873))
location: region:5248714-5374873:-1
so has part: feature:5374766-5374873:-1:exon
so has part: feature:5365521-5365589:-1:exon
so has part: feature:5296949-5297050:-1:exon
so has part: feature:5282958-5283165:-1:exon
so has part: feature:5267775-5267982:-1:exon
so has part: feature:5248714-5248917:-1:exon

XP_020936546.1
type: Protein
SIO_000068: ncbiprotein

position:5248714:-1
position: 5248714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5374766-5374873:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5365521-5365589:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5296949-5297050:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5282958-5283165:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5267775-5267982:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5248714-5248917:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 5377731..5427730
location: region:5377731-5427730:1
so has part: feature:5377731-5427730:1:region

position:5377731:1
position: 5377731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5427730:1
position: 5427730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5377731-5427730:1:region

LOC110257932
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5455059..5534898)
location: region:5455059-5534898:-1
so has part: feature:5455059-5534898:-1:exon
subclass of: SO_0000011

110257932
type: Gene
SIO_000068: ncbigene

position:5455059:-1
position: 5455059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5534898:-1
position: 5534898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5455059-5534898:-1:exon

LOC110257932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257932
product: uncharacterized LOC110257932, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002340934.1
SIO_010081: LOC110257932
subclass of: SO_0000673
so part of: LOC110257932
location: complement(join(5455059..5455339,5534203..5534359,5534718..5534898))
location: region:5455059-5534898:-1
so has part: feature:5534718-5534898:-1:exon
so has part: feature:5534203-5534359:-1:exon
so has part: feature:5455059-5455339:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5534718-5534898:-1:exon

position:5534718:-1
position: 5534718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5534203-5534359:-1:exon

position:5534203:-1
position: 5534203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5534359:-1
position: 5534359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5455059-5455339:-1:exon

position:5455339:-1
position: 5455339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257932
product: uncharacterized LOC110257932, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002340932.1
SIO_010081: LOC110257932
subclass of: SO_0000673
so part of: LOC110257932
location: complement(join(5455059..5455339,5534203..5534359,5534762..5534895))
location: region:5455059-5534895:-1
so has part: feature:5534762-5534895:-1:exon
so has part: feature:5534203-5534359:-1:exon
so has part: feature:5455059-5455339:-1:exon

position:5534895:-1
position: 5534895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5534762-5534895:-1:exon

position:5534762:-1
position: 5534762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5534203-5534359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5455059-5455339:-1:exon

LOC110257932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257932
product: uncharacterized LOC110257932, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_002340933.1
SIO_010081: LOC110257932
subclass of: SO_0000673
so part of: LOC110257932
location: complement(join(5523231..5523454,5534203..5534359,5534762..5534895))
location: region:5523231-5534895:-1
so has part: feature:5534762-5534895:-1:exon
so has part: feature:5534203-5534359:-1:exon
so has part: feature:5523231-5523454:-1:exon

position:5523231:-1
position: 5523231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5534762-5534895:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5534203-5534359:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5523231-5523454:-1:exon

position:5523454:-1
position: 5523454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 5539740..5589739
location: region:5539740-5589739:1
so has part: feature:5539740-5589739:1:region

position:5539740:1
position: 5539740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5589739:1
position: 5589739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5539740-5589739:1:region

LOC110257933
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257933
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5668872..5680754
location: region:5668872-5680754:1
so has part: feature:5668872-5680754:1:exon
subclass of: SO_0000011

110257933
type: Gene
SIO_000068: ncbigene

position:5668872:1
position: 5668872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5680754:1
position: 5680754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5668872-5680754:1:exon

LOC110257933
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257933
product: uncharacterized LOC110257933
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002340935.1
SIO_010081: LOC110257933
subclass of: SO_0000673
so part of: LOC110257933
location: join(5668872..5669158,5669414..5669474,5679989..5680754)
location: region:5668872-5680754:1
so has part: feature:5668872-5669158:1:exon
so has part: feature:5669414-5669474:1:exon
so has part: feature:5679989-5680754:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5668872-5669158:1:exon

position:5669158:1
position: 5669158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5669414-5669474:1:exon

position:5669414:1
position: 5669414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5669474:1
position: 5669474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5679989-5680754:1:exon

position:5679989:1
position: 5679989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 5689677..5739676
location: region:5689677-5739676:1
so has part: feature:5689677-5739676:1:region

position:5689677:1
position: 5689677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5739676:1
position: 5739676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5689677-5739676:1:region

LOC110257943
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5836661..5851884
location: region:5836661-5851884:1
so has part: feature:5836661-5851884:1:exon
subclass of: SO_0000010

110257943
type: Gene
SIO_000068: ncbigene

position:5836661:1
position: 5836661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5851884:1
position: 5851884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5836661-5851884:1:exon

LOC110257943
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257943
product: putative serine/threonine-protein kinase PRKY
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080961.1
SIO_010081: LOC110257943
subclass of: SO_0000673
so part of: LOC110257943
location: join(5836661..5836673,5836932..5837100,5851313..5851884)
location: region:5836661-5851884:1
so has part: feature:5836661-5836673:1:exon
so has part: feature:5836932-5837100:1:exon
so has part: feature:5851313-5851884:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5836661-5836673:1:exon

position:5836673:1
position: 5836673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5836932-5837100:1:exon

position:5836932:1
position: 5836932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5837100:1
position: 5837100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5851313-5851884:1:exon

position:5851313:1
position: 5851313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257943
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257943
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative serine/threonine-protein kinase PRKY
translation: MQGEGTGTFGRVQLVREKKAKHFFALKVMSIPEVIRLKQEQHVHNEKSVLKEVSHPFLVKLFWTGHDDRFLYMLMEFVPGGELFSYLRNRGRFSATTGLFYSAEIVCAIEYLHSKEIVYRDLKPENILLDRDGHIKLTDFGFAKKLVDK
SIO_010081: LOC110257943
subclass of: SO_0000673
so part of: LOC110257943
location: join(5836661..5836673,5836932..5837100,5851313..5851580)
location: region:5836661-5851580:1
so has part: feature:5836661-5836673:1:exon
so has part: feature:5836932-5837100:1:exon
so has part: feature:5851313-5851580:1:exon

XP_020936620.1
type: Protein
SIO_000068: ncbiprotein

position:5851580:1
position: 5851580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5836661-5836673:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5836932-5837100:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5851313-5851580:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 5865600..5915599
location: region:5865600-5915599:1
so has part: feature:5865600-5915599:1:region

position:5865600:1
position: 5865600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5915599:1
position: 5915599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5865600-5915599:1:region

CD99
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: CD99
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5946851..5983610
location: region:5946851-5983610:1
so has part: feature:5946851-5983610:1:exon
subclass of: SO_0000011

100624156
type: Gene
SIO_000068: ncbigene

position:5946851:1
position: 5946851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5983610:1
position: 5983610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5946851-5983610:1:exon

CD99
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: CD99
product: CD99 molecule (Xg blood group), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 143 ESTs, 191 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 178 samples with support for all annotated introns
transcript id: XR_002340897.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(5946851..5947068,5961599..5961631,5962599..5962643,5964356..5964400,5965494..5965556,5969421..5969465,5971617..5971682,5973941..5974054,5980652..5980708,5982403..5983610)
location: region:5946851-5983610:1
so has part: feature:5946851-5947068:1:exon
so has part: feature:5961599-5961631:1:exon
so has part: feature:5962599-5962643:1:exon
so has part: feature:5964356-5964400:1:exon
so has part: feature:5965494-5965556:1:exon
so has part: feature:5969421-5969465:1:exon
so has part: feature:5971617-5971682:1:exon
so has part: feature:5973941-5974054:1:exon
so has part: feature:5980652-5980708:1:exon
so has part: feature:5982403-5983610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5946851-5947068:1:exon

position:5947068:1
position: 5947068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5961599-5961631:1:exon

position:5961599:1
position: 5961599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5961631:1
position: 5961631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5962599-5962643:1:exon

position:5962599:1
position: 5962599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5962643:1
position: 5962643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5964356-5964400:1:exon

position:5964356:1
position: 5964356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5964400:1
position: 5964400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5965494-5965556:1:exon

position:5965494:1
position: 5965494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5965556:1
position: 5965556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5969421-5969465:1:exon

position:5969421:1
position: 5969421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5969465:1
position: 5969465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5971617-5971682:1:exon

position:5971617:1
position: 5971617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5971682:1
position: 5971682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5973941-5974054:1:exon

position:5973941:1
position: 5973941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5974054:1
position: 5974054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5980652-5980708:1:exon

position:5980652:1
position: 5980652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5980708:1
position: 5980708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5982403-5983610:1:exon

position:5982403:1
position: 5982403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD99
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: CD99
product: CD99 molecule (Xg blood group), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XR_002340896.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(5946914..5947068,5961599..5961631,5962599..5962643,5964356..5964400,5965494..5965556,5969421..5969465,5971536..5971682,5973941..5974054,5977462..5978074)
location: region:5946914-5978074:1
so has part: feature:5946914-5947068:1:exon
so has part: feature:5961599-5961631:1:exon
so has part: feature:5962599-5962643:1:exon
so has part: feature:5964356-5964400:1:exon
so has part: feature:5965494-5965556:1:exon
so has part: feature:5969421-5969465:1:exon
so has part: feature:5971536-5971682:1:exon
so has part: feature:5973941-5974054:1:exon
so has part: feature:5977462-5978074:1:exon

position:5946914:1
position: 5946914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5978074:1
position: 5978074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5946914-5947068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5961599-5961631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5962599-5962643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5964356-5964400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5965494-5965556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5969421-5969465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5971536-5971682:1:exon

position:5971536:1
position: 5971536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5973941-5974054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5977462-5978074:1:exon

position:5977462:1
position: 5977462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CD99
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: CD99
product: CD99 molecule (Xg blood group), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 ESTs, 8 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 78 samples with support for all annotated introns
transcript id: XR_002340895.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(5946916..5947068,5961599..5961631,5962599..5962643,5964356..5964400,5965494..5965556,5969421..5969465,5971536..5971682,5973941..5974054,5980652..5980708,5982403..5983610)
location: region:5946916-5983610:1
so has part: feature:5946916-5947068:1:exon
so has part: feature:5961599-5961631:1:exon
so has part: feature:5962599-5962643:1:exon
so has part: feature:5964356-5964400:1:exon
so has part: feature:5965494-5965556:1:exon
so has part: feature:5969421-5969465:1:exon
so has part: feature:5971536-5971682:1:exon
so has part: feature:5973941-5974054:1:exon
so has part: feature:5980652-5980708:1:exon
so has part: feature:5982403-5983610:1:exon

position:5946916:1
position: 5946916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5946916-5947068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5961599-5961631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5962599-5962643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5964356-5964400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5965494-5965556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5969421-5969465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5971536-5971682:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5973941-5974054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5980652-5980708:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5982403-5983610:1:exon

CD99
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: CD99
product: CD99 molecule (Xg blood group), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 167 samples with support for all annotated introns
transcript id: XR_002340898.1
SIO_010081: CD99
subclass of: SO_0000673
so part of: CD99
location: join(5946917..5947068,5961599..5961631,5962599..5962643,5964356..5964400,5965494..5965556,5969421..5969465,5971617..5971682,5973941..5974054,5977462..5978074)
location: region:5946917-5978074:1
so has part: feature:5946917-5947068:1:exon
so has part: feature:5961599-5961631:1:exon
so has part: feature:5962599-5962643:1:exon
so has part: feature:5964356-5964400:1:exon
so has part: feature:5965494-5965556:1:exon
so has part: feature:5969421-5969465:1:exon
so has part: feature:5971617-5971682:1:exon
so has part: feature:5973941-5974054:1:exon
so has part: feature:5977462-5978074:1:exon

position:5946917:1
position: 5946917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5946917-5947068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5961599-5961631:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5962599-5962643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5964356-5964400:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5965494-5965556:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5969421-5969465:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5971617-5971682:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5973941-5974054:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5977462-5978074:1:exon

LOC110257870
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257870
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5948875..5958276
location: region:5948875-5958276:1
so has part: feature:5948875-5958276:1:exon
subclass of: SO_0000011

110257870
type: Gene
SIO_000068: ncbigene

position:5948875:1
position: 5948875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5958276:1
position: 5958276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5948875-5958276:1:exon

LOC110257870
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257870
product: uncharacterized LOC110257870
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_002340899.1
SIO_010081: LOC110257870
subclass of: SO_0000673
so part of: LOC110257870
location: join(5948875..5951272,5952821..5958276)
location: region:5948875-5958276:1
so has part: feature:5948875-5951272:1:exon
so has part: feature:5952821-5958276:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5948875-5951272:1:exon

position:5951272:1
position: 5951272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5952821-5958276:1:exon

position:5952821:1
position: 5952821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 5990052..6040051
location: region:5990052-6040051:1
so has part: feature:5990052-6040051:1:region

position:5990052:1
position: 5990052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6040051:1
position: 6040051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5990052-6040051:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 6140739..6190738
location: region:6140739-6190738:1
so has part: feature:6140739-6190738:1:region

position:6140739:1
position: 6140739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6190738:1
position: 6190738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6140739-6190738:1:region

LOC110257909
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6287500..6290829
location: region:6287500-6290829:1
so has part: feature:6287500-6290829:1:exon
subclass of: SO_0000011

110257909
type: Gene
SIO_000068: ncbigene

position:6287500:1
position: 6287500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6290829:1
position: 6290829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6287500-6290829:1:exon

LOC110257909
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257909
product: uncharacterized LOC110257909
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002340916.1
SIO_010081: LOC110257909
subclass of: SO_0000673
so part of: LOC110257909
location: join(6287500..6287586,6289059..6290829)
location: region:6287500-6290829:1
so has part: feature:6287500-6287586:1:exon
so has part: feature:6289059-6290829:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6287500-6287586:1:exon

position:6287586:1
position: 6287586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6289059-6290829:1:exon

position:6289059:1
position: 6289059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257934
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257934
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6355938..6357681)
location: region:6355938-6357681:-1
so has part: feature:6355938-6357681:-1:exon
subclass of: SO_0000011

110257934
type: Gene
SIO_000068: ncbigene

position:6355938:-1
position: 6355938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6357681:-1
position: 6357681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6355938-6357681:-1:exon

LOC110257934
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257934
product: uncharacterized LOC110257934
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_002340936.1
SIO_010081: LOC110257934
subclass of: SO_0000673
so part of: LOC110257934
location: complement(join(6355938..6357340,6357537..6357681))
location: region:6355938-6357681:-1
so has part: feature:6357537-6357681:-1:exon
so has part: feature:6355938-6357340:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6357537-6357681:-1:exon

position:6357537:-1
position: 6357537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6355938-6357340:-1:exon

position:6357340:-1
position: 6357340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 6414387..6464386
location: region:6414387-6464386:1
so has part: feature:6414387-6464386:1:region

position:6414387:1
position: 6414387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6464386:1
position: 6464386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6414387-6464386:1:region

LOC110257935
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6511350..6524989)
location: region:6511350-6524989:-1
so has part: feature:6511350-6524989:-1:exon
subclass of: SO_0000010

110257935
type: Gene
SIO_000068: ncbigene

position:6511350:-1
position: 6511350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6524989:-1
position: 6524989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6511350-6524989:-1:exon

LOC110257935
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257935
product: matrix-remodeling-associated protein 5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 16 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_021080944.1
SIO_010081: LOC110257935
subclass of: SO_0000673
so part of: LOC110257935
location: complement(join(6511350..6514436,6518213..6519113,6522266..6524989))
location: region:6511350-6524989:-1
so has part: feature:6522266-6524989:-1:exon
so has part: feature:6518213-6519113:-1:exon
so has part: feature:6511350-6514436:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6522266-6524989:-1:exon

position:6522266:-1
position: 6522266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6518213-6519113:-1:exon

position:6518213:-1
position: 6518213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6519113:-1
position: 6519113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6511350-6514436:-1:exon

position:6514436:-1
position: 6514436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257935
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257935
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: matrix-remodeling-associated protein 5-like
translation: MNDLTSSGFTAAPTLGVADSRTFEPFEDHSVRETLVPAQTFLQGHSDTRQLVSNLSTQAHPRVRQGSQEDAQTVRKERVLDRDPANFGNPENRRQGQVSSTLLDAALEVMSNVTAWKHPKETTRLDEAATTVAMLAPTQRSPAPSAPTTHPSRRRPQGKKRVRTHRLRQRQKQPPPTTLAPVETFSTPPTRVPEGAVPKQGDSLPVPTPWLESTVHTPPQLDAQRPSEPVPKEPPRKKHGKRPNKHRYVTATASPTASVSPTSPFPENKGVPTPTSQAVLPATTVSLPTVDLPRGSRVEGDSTTRVEIRFSPDQLQEASPLTHEPVPPGKEVENLGVANIDDYKTGSPLPGESVGHTVSPLGATVSSGGEFKEASKPSGFPGTPGWNPPGAAQPEELLTDRPAPGSSEAVTDSPFFQEGEGPGFPSEFAPSVAVSTMLQPEEWVPSPTLPGLKVEASSSPAETSISDQSDHAARPATLRPEGGPQPRISPPVPVREPASPLPPTTTLASLAHTTAQPAPLTSKTSPASSTSKENLLSGDGRTPETTTPSVKKQGTQPTGKPDRVSTPSPVLDKWNVTPKPVSGKEAPDGRTESLLPRLPESRQEAGRAQVFQPPPRVPTKPVSSRETVRPPQTTQSSLRYFVTFQPPRHTTNRPETTAHPSRVPLTNERFTTPTLPGPTSPVVPLHGSKPSAPGTTTRGPHRAHGSSTSPGDNHLPDLRAPAGKLPHPRAPPASGRLPFFLNRTLSFPPLGATPKPPTPASPALVTRDQKVNPGPSHRIHSQSIAQVDLGPPAPPLLPAPRTTAPPSTNVRNLPAVFSTRSSVPSLTPSAQPSRSVHHSSLKLFSAAGPPASKFWTLGEKPHIVTKSPPSVTVTAETDVVFPCEATGQPQPFVTWTKVSTGALMTPNTRVQRFEVLKNGTFVIRNVQVQDGGQYMCTAKNLHGADRMVVLLTVAVQQPQILASHYEDVTVYLGDTIAMECLAKGTPAPQISWIFPDRRVWQAVSPVEGRITLHENRTLSIKEASFSDRGVYKCVASNAAGADSLAIRLHVAALPPVIQQEKLENISVPPGLSIHIHCTAKAAPLPSVRWVLWDGTQIRPSQFLHGNLFVFPNGTLYIRNLAPKDSGRYECVAANLVGSARRAVQLSVMRAAANARITGTSPQRTDVRYGGTLRLDCSASGDPWPRILWRLPSKRMIDALFSFDTRMKVFANGTLLVKSVTDKDAGDYLCIARNKVGDDFVMLQVNVVMRPAKIEHKEENDHRVFYGGDLKVDCVATGLPNPEISWSLPDGSLVNSFMQSDDGGGRAKRYVVFNNGTLYFNEVGMREEGDYTCVAENQVGKDEMTVHVKVVTEPPAIRNKTYSVVQVPYGDVVTVACEAKGEPTPRVTWLSPTNRLIPASSEKYQIYPDGTLLIQKAQRSDSGNYTCVVRNSAGEDRKMVWILVHVQAPRINGNPDAITTVREIAPVGSRKLIDCQAEGTPMPRVLWAFPEGVVLPAPYHGNRITIHGNGTLDIRRLRKSDSVQLVCIGRNEGGEARLIVQLTVLEPVEKPIFHDPVSEKITAMAGHTISLNCSAAGTPTPTLLWVLPNRTELRSGQQLQRFYHKGDGKLHISDLSSVDAGAYRCVARNSAGYTERLVSLKVGLKPETSNRYHNLISIINGETLHLPCAPPGGRQVRSSWTLPNGLVLEGPQARGRFTLWENGTLTVRDASVFDRGTYVCKADTEYGPSVANVPVIVIAYPPRITSEPTPVIYTRPGNMVKLNCMVMAIPKAEITWELPDKSLLMAGTQPRLYGHRFLHPQGSLTIQQATQRDAGFYKCSAKNILGSDSKTTYIHVY
SIO_010081: LOC110257935
subclass of: SO_0000673
so part of: LOC110257935
location: complement(join(6512528..6514436,6518213..6519113,6522266..6524966))
location: region:6512528-6524966:-1
so has part: feature:6522266-6524966:-1:exon
so has part: feature:6518213-6519113:-1:exon
so has part: feature:6512528-6514436:-1:exon

XP_020936603.1
type: Protein
SIO_000068: ncbiprotein

position:6512528:-1
position: 6512528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6524966:-1
position: 6524966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6522266-6524966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6518213-6519113:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6512528-6514436:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 6568084..6618083
location: region:6568084-6618083:1
so has part: feature:6568084-6618083:1:region

position:6568084:1
position: 6568084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6618083:1
position: 6618083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6568084-6618083:1:region

LOC110257939
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6619087..6629042)
location: region:6619087-6629042:-1
so has part: feature:6619087-6629042:-1:exon
subclass of: SO_0000010

110257939
type: Gene
SIO_000068: ncbigene

position:6619087:-1
position: 6619087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6629042:-1
position: 6629042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6619087-6629042:-1:exon

LOC110257939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257939
product: arylsulfatase E-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_021080950.1
SIO_010081: LOC110257939
subclass of: SO_0000673
so part of: LOC110257939
location: complement(join(6619087..6619306,6621434..6621555,6623579..6623728,6624592..6624636,6628443..6628675,6628915..6629042))
location: region:6619087-6629042:-1
so has part: feature:6628915-6629042:-1:exon
so has part: feature:6628443-6628675:-1:exon
so has part: feature:6624592-6624636:-1:exon
so has part: feature:6623579-6623728:-1:exon
so has part: feature:6621434-6621555:-1:exon
so has part: feature:6619087-6619306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6628915-6629042:-1:exon

position:6628915:-1
position: 6628915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6628443-6628675:-1:exon

position:6628443:-1
position: 6628443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6628675:-1
position: 6628675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6624592-6624636:-1:exon

position:6624592:-1
position: 6624592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6624636:-1
position: 6624636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6623579-6623728:-1:exon

position:6623579:-1
position: 6623579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6623728:-1
position: 6623728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6621434-6621555:-1:exon

position:6621434:-1
position: 6621434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6621555:-1
position: 6621555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6619087-6619306:-1:exon

position:6619306:-1
position: 6619306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257939
product: arylsulfatase E-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_021080949.1
SIO_010081: LOC110257939
subclass of: SO_0000673
so part of: LOC110257939
location: complement(join(6619087..6619306,6621434..6621555,6623579..6623728,6624592..6624636,6628443..6628817))
location: region:6619087-6628817:-1
so has part: feature:6628443-6628817:-1:exon
so has part: feature:6624592-6624636:-1:exon
so has part: feature:6623579-6623728:-1:exon
so has part: feature:6621434-6621555:-1:exon
so has part: feature:6619087-6619306:-1:exon

position:6628817:-1
position: 6628817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6628443-6628817:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6624592-6624636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6623579-6623728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6621434-6621555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6619087-6619306:-1:exon

LOC110257939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylsulfatase E-like isoform X1
translation: MLHLGSSWSGLALTIGVLLGSKPSAYGDLSASRPNILLLMADDLGIGDLGCYGNHTIRTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGMVSSTGSRVLQWVAASGGLPPNETTFAKILKDKGYVTGLVGMYSLSVLRAFLFLDMF
SIO_010081: LOC110257939
subclass of: SO_0000673
so part of: LOC110257939
location: complement(join(6619131..6619306,6621434..6621555,6623579..6623728,6624592..6624614))
location: region:6619131-6624614:-1
so has part: feature:6624592-6624614:-1:exon
so has part: feature:6623579-6623728:-1:exon
so has part: feature:6621434-6621555:-1:exon
so has part: feature:6619131-6619306:-1:exon

XP_020936608.1
type: Protein
SIO_000068: ncbiprotein

position:6619131:-1
position: 6619131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6624614:-1
position: 6624614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6624592-6624614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6623579-6623728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6621434-6621555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6619131-6619306:-1:exon

LOC110257939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylsulfatase E-like isoform X1
translation: MLHLGSSWSGLALTIGVLLGSKPSAYGDLSASRPNILLLMADDLGIGDLGCYGNHTIRTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGMVSSTGSRVLQWVAASGGLPPNETTFAKILKDKGYVTGLVGMYSLSVLRAFLFLDMF
SIO_010081: LOC110257939
subclass of: SO_0000673
so part of: LOC110257939
location: complement(join(6619131..6619306,6621434..6621555,6623579..6623728,6624592..6624614))
location: region:6619131-6624614:-1
so has part: feature:6624592-6624614:-1:exon
so has part: feature:6623579-6623728:-1:exon
so has part: feature:6621434-6621555:-1:exon
so has part: feature:6619131-6619306:-1:exon

XP_020936609.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6624592-6624614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6623579-6623728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6621434-6621555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6619131-6619306:-1:exon

LOC110257939
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257939
product: arylsulfatase E-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021080951.1
SIO_010081: LOC110257939
subclass of: SO_0000673
so part of: LOC110257939
location: complement(join(6619978..6620699,6621434..6621555,6623579..6623728,6624592..6624636,6628443..6628818))
location: region:6619978-6628818:-1
so has part: feature:6628443-6628818:-1:exon
so has part: feature:6624592-6624636:-1:exon
so has part: feature:6623579-6623728:-1:exon
so has part: feature:6621434-6621555:-1:exon
so has part: feature:6619978-6620699:-1:exon

position:6619978:-1
position: 6619978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6628818:-1
position: 6628818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6628443-6628818:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6624592-6624636:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6623579-6623728:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6621434-6621555:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6619978-6620699:-1:exon

position:6620699:-1
position: 6620699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257939
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylsulfatase E-like isoform X2
translation: MLHLGSSWSGLALTIGVLLGSKPSAYGDLSASRPNILLLMADDLGIGDLGCYGNHTIRTPNIDRLAADGVMLTQHLAAASLCTPSRAAFLTGRYPLRSGSCSIQATRHSSQGYTAASHWTTSSLSIPLSMDI
SIO_010081: LOC110257939
subclass of: SO_0000673
so part of: LOC110257939
location: complement(join(6620596..6620699,6621434..6621555,6623579..6623728,6624592..6624614))
location: region:6620596-6624614:-1
so has part: feature:6624592-6624614:-1:exon
so has part: feature:6623579-6623728:-1:exon
so has part: feature:6621434-6621555:-1:exon
so has part: feature:6620596-6620699:-1:exon

XP_020936610.1
type: Protein
SIO_000068: ncbiprotein

position:6620596:-1
position: 6620596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6624592-6624614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6623579-6623728:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6621434-6621555:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6620596-6620699:-1:exon

LOC110257937
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6658296..6681744
location: region:6658296-6681744:1
so has part: feature:6658296-6681744:1:exon
subclass of: SO_0000010

110257937
type: Gene
SIO_000068: ncbigene

position:6658296:1
position: 6658296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6681744:1
position: 6681744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6658296-6681744:1:exon

LOC110257937
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257937
product: arylsulfatase F-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_021080946.1
SIO_010081: LOC110257937
subclass of: SO_0000673
so part of: LOC110257937
location: join(6658296..6658491,6659631..6659689,6661303..6661452,6664085..6664206,6666017..6666139,6673870..6674293,6678808..6681744)
location: region:6658296-6681744:1
so has part: feature:6658296-6658491:1:exon
so has part: feature:6659631-6659689:1:exon
so has part: feature:6661303-6661452:1:exon
so has part: feature:6664085-6664206:1:exon
so has part: feature:6666017-6666139:1:exon
so has part: feature:6673870-6674293:1:exon
so has part: feature:6678808-6681744:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6658296-6658491:1:exon

position:6658491:1
position: 6658491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6659631-6659689:1:exon

position:6659631:1
position: 6659631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6659689:1
position: 6659689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6661303-6661452:1:exon

position:6661303:1
position: 6661303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6661452:1
position: 6661452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6664085-6664206:1:exon

position:6664085:1
position: 6664085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6664206:1
position: 6664206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6666017-6666139:1:exon

position:6666017:1
position: 6666017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6666139:1
position: 6666139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6673870-6674293:1:exon

position:6673870:1
position: 6673870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6674293:1
position: 6674293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6678808-6681744:1:exon

position:6678808:1
position: 6678808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257937
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257937
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: arylsulfatase F-like
translation: MNFRTLLFCLSWVCFHLDTCRSQVVKDEKPNIVLVMVDDLGIGDLGCYGNNTLRTPHVDRLAREGVQLTQHISAASMCTPSRSAFLTGRYPIRSGMTSNRISRVITSLGVPAGLPLNETTFAALLKKQGYHTAIIGKWHQGLNCHSRNDHCHHPSNYGFDYFYGMPFTLVAPCWPDPSRQTELAIASRIWLFVQLIAVAVLTLALGKLSGWISVPWFLILVMVLFIFLLGYFWFSSFHSSLYWDCLLLREHKITEQPMKAERAGSIMLKEALSFLERHQEGPFLLLFSFLHVHIPLPTTEAFIDVSEHSLYGDNVEEMDAMLGEWQDPRGALIAQVAQKQPVKRTFGMHVSRVRRVTATRWSCPLNP
SIO_010081: LOC110257937
subclass of: SO_0000673
so part of: LOC110257937
location: join(6659679..6659689,6661303..6661452,6664085..6664206,6666017..6666139,6673870..6674293,6678808..6679081)
location: region:6659679-6679081:1
so has part: feature:6659679-6659689:1:exon
so has part: feature:6661303-6661452:1:exon
so has part: feature:6664085-6664206:1:exon
so has part: feature:6666017-6666139:1:exon
so has part: feature:6673870-6674293:1:exon
so has part: feature:6678808-6679081:1:exon

XP_020936605.1
type: Protein
SIO_000068: ncbiprotein

position:6659679:1
position: 6659679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6679081:1
position: 6679081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6659679-6659689:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6661303-6661452:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6664085-6664206:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6666017-6666139:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6673870-6674293:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6678808-6679081:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 6683972..6733971
location: region:6683972-6733971:1
so has part: feature:6683972-6733971:1:region

position:6683972:1
position: 6683972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6733971:1
position: 6733971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6683972-6733971:1:region

LOC110257940
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257940
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6801886..6804379)
location: region:6801886-6804379:-1
so has part: feature:6801886-6804379:-1:exon
subclass of: SO_0000011

110257940
type: Gene
SIO_000068: ncbigene

position:6801886:-1
position: 6801886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6804379:-1
position: 6804379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6801886-6804379:-1:exon

LOC110257940
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257940
product: uncharacterized LOC110257940
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002340937.1
SIO_010081: LOC110257940
subclass of: SO_0000673
so part of: LOC110257940
location: complement(join(6801886..6802258,6802661..6804379))
location: region:6801886-6804379:-1
so has part: feature:6802661-6804379:-1:exon
so has part: feature:6801886-6802258:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6802661-6804379:-1:exon

position:6802661:-1
position: 6802661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6801886-6802258:-1:exon

position:6802258:-1
position: 6802258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 6814265..6864264
location: region:6814265-6864264:1
so has part: feature:6814265-6864264:1:region

position:6814265:1
position: 6814265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6864264:1
position: 6864264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6814265-6864264:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 6919896..6969895
location: region:6919896-6969895:1
so has part: feature:6919896-6969895:1:region

position:6919896:1
position: 6919896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6969895:1
position: 6969895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6919896-6969895:1:region

LOC110257938
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6971001..6985133
location: region:6971001-6985133:1
so has part: feature:6971001-6985133:1:exon
subclass of: SO_0000010

110257938
type: Gene
SIO_000068: ncbigene

position:6971001:1
position: 6971001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6985133:1
position: 6985133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6971001-6985133:1:exon

LOC110257938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257938
product: PI-PLC X domain-containing protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 13 long SRA reads, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_021080947.1
SIO_010081: LOC110257938
subclass of: SO_0000673
so part of: LOC110257938
location: join(6971001..6972536,6976665..6976793,6977569..6977724,6979438..6979621,6982725..6985133)
location: region:6971001-6985133:1
so has part: feature:6971001-6972536:1:exon
so has part: feature:6976665-6976793:1:exon
so has part: feature:6977569-6977724:1:exon
so has part: feature:6979438-6979621:1:exon
so has part: feature:6982725-6985133:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6971001-6972536:1:exon

position:6972536:1
position: 6972536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6976665-6976793:1:exon

position:6976665:1
position: 6976665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6976793:1
position: 6976793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6977569-6977724:1:exon

position:6977569:1
position: 6977569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6977724:1
position: 6977724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6979438-6979621:1:exon

position:6979438:1
position: 6979438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6979621:1
position: 6979621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6982725-6985133:1:exon

position:6982725:1
position: 6982725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PI-PLC X domain-containing protein 1-like
translation: MRVRGPRSAPRAARVFPVCGAGPRAGGRSNEMSLGCRPGSHDTMTYCLNKKSPISHNESRLLQLLAKILPCVTLPVVLRWSITQVLDVTEQLDAGVRYLDLRIAHMLEGAQRNLHFVHMLYTTALVEDTLTEISGWLENHPREVVVLACRDFEGMTEDLHEYLVACIKNIFGDMLCPRGEMPTLRQLWSRGQQVILSYEDEASVSRHAELWPGIPYWWGNKVKPQDLVCYLERMKSCGRPGGLFVAGINLTENLEYVLGHLAGSLERMTLPSLPYLDAWVRAQCPGSGVRCTNIIAGDFIGADTFVSDVIRLNEKLFRG
SIO_010081: LOC110257938
subclass of: SO_0000673
so part of: LOC110257938
location: join(6972285..6972536,6976665..6976793,6977569..6977724,6979438..6979621,6982725..6982963)
location: region:6972285-6982963:1
so has part: feature:6972285-6972536:1:exon
so has part: feature:6976665-6976793:1:exon
so has part: feature:6977569-6977724:1:exon
so has part: feature:6979438-6979621:1:exon
so has part: feature:6982725-6982963:1:exon

XP_020936606.1
type: Protein
SIO_000068: ncbiprotein

position:6972285:1
position: 6972285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6982963:1
position: 6982963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6972285-6972536:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6976665-6976793:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6977569-6977724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6979438-6979621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6982725-6982963:1:exon

LOC110257936
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6985633..6999844)
location: region:6985633-6999844:-1
so has part: feature:6985633-6999844:-1:exon
subclass of: SO_0000010

110257936
type: Gene
SIO_000068: ncbigene

position:6985633:-1
position: 6985633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6999844:-1
position: 6999844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6985633-6999844:-1:exon

LOC110257936
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257936
product: putative GTP-binding protein 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 85 long SRA reads, 2 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 158 samples with support for all annotated introns
transcript id: XM_021080945.1
SIO_010081: LOC110257936
subclass of: SO_0000673
so part of: LOC110257936
location: complement(join(6985633..6987317,6987518..6987670,6987979..6988127,6989151..6989359,6990662..6990820,6991298..6991368,6991697..6991827,6991913..6991983,6992478..6992615,6995940..6999844))
location: region:6985633-6999844:-1
so has part: feature:6995940-6999844:-1:exon
so has part: feature:6992478-6992615:-1:exon
so has part: feature:6991913-6991983:-1:exon
so has part: feature:6991697-6991827:-1:exon
so has part: feature:6991298-6991368:-1:exon
so has part: feature:6990662-6990820:-1:exon
so has part: feature:6989151-6989359:-1:exon
so has part: feature:6987979-6988127:-1:exon
so has part: feature:6987518-6987670:-1:exon
so has part: feature:6985633-6987317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6995940-6999844:-1:exon

position:6995940:-1
position: 6995940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6992478-6992615:-1:exon

position:6992478:-1
position: 6992478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6992615:-1
position: 6992615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6991913-6991983:-1:exon

position:6991913:-1
position: 6991913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6991983:-1
position: 6991983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6991697-6991827:-1:exon

position:6991697:-1
position: 6991697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6991827:-1
position: 6991827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6991298-6991368:-1:exon

position:6991298:-1
position: 6991298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6991368:-1
position: 6991368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6990662-6990820:-1:exon

position:6990662:-1
position: 6990662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6990820:-1
position: 6990820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6989151-6989359:-1:exon

position:6989151:-1
position: 6989151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6989359:-1
position: 6989359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6987979-6988127:-1:exon

position:6987979:-1
position: 6987979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6988127:-1
position: 6988127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6987518-6987670:-1:exon

position:6987518:-1
position: 6987518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6987670:-1
position: 6987670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6985633-6987317:-1:exon

position:6987317:-1
position: 6987317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257936
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257936
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative GTP-binding protein 6
translation: MWALRAAVRPGARLSRVVRGCGAPKAAPPLPPCPKRTVAAFRGGAGGPEGREGGRWSPGANGWRSRAGEEEEEPEDAEEEEEEEELLRRDPLLPAGTQRVFLIHPEVKWGPRKPQGTRAEWQVAEAQALVRTLDGWSVVDTAVVPTKTPDRRLIFGKGTLEHLTEKIRGSREVSAVFLNVERMATPTKKELEATWGVQVFDRFTVVLHIFRCNARTKEARLQVALAELPLLRSHLKSDIGHLDGRGGGSRYIMGSGESSLQVQQRLLKDKEVRIRRALERLRGKRLLLGRQRRRREFPVISVVGYTNCGKTTLIKALTGDAAVQPRDQLFATLDVTAHAGSLPSRMAVIYMDTIGFLSQLPHSLIESFSATLEDVAHSDLIVHVRDVSHPETELQKDSVLSALRGLRLPAVLLDNVLEVHNKVDLVPGYKPMGPHAVAVSALLGLGLEELKARLEDAVLTATGRRVLTLRVRLAGAQLSWLHKEATVQAVDVMPEAGAADVKVIISHSAYGRFRKLFPE
SIO_010081: LOC110257936
subclass of: SO_0000673
so part of: LOC110257936
location: complement(join(6987194..6987317,6987518..6987670,6987979..6988127,6989151..6989359,6990662..6990820,6991298..6991368,6991697..6991827,6991913..6991983,6992478..6992615,6995940..6996294))
location: region:6987194-6996294:-1
so has part: feature:6995940-6996294:-1:exon
so has part: feature:6992478-6992615:-1:exon
so has part: feature:6991913-6991983:-1:exon
so has part: feature:6991697-6991827:-1:exon
so has part: feature:6991298-6991368:-1:exon
so has part: feature:6990662-6990820:-1:exon
so has part: feature:6989151-6989359:-1:exon
so has part: feature:6987979-6988127:-1:exon
so has part: feature:6987518-6987670:-1:exon
so has part: feature:6987194-6987317:-1:exon

XP_020936604.1
type: Protein
SIO_000068: ncbiprotein

position:6987194:-1
position: 6987194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6996294:-1
position: 6996294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6995940-6996294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6992478-6992615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6991913-6991983:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6991697-6991827:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6991298-6991368:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6990662-6990820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6989151-6989359:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6987979-6988127:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6987518-6987670:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6987194-6987317:-1:exon

LOC110257941
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7004700..7009210
location: region:7004700-7009210:1
so has part: feature:7004700-7009210:1:exon
subclass of: SO_0000011

110257941
type: Gene
SIO_000068: ncbigene

position:7004700:1
position: 7004700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7009210:1
position: 7009210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7004700-7009210:1:exon

LOC110257941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257941
product: uncharacterized LOC110257941
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002340938.1
SIO_010081: LOC110257941
subclass of: SO_0000673
so part of: LOC110257941
location: join(7004700..7006585,7008705..7008752,7009005..7009210)
location: region:7004700-7009210:1
so has part: feature:7004700-7006585:1:exon
so has part: feature:7008705-7008752:1:exon
so has part: feature:7009005-7009210:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7004700-7006585:1:exon

position:7006585:1
position: 7006585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7008705-7008752:1:exon

position:7008705:1
position: 7008705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7008752:1
position: 7008752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7009005-7009210:1:exon

position:7009005:1
position: 7009005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 7038979..7088978
location: region:7038979-7088978:1
so has part: feature:7038979-7088978:1:region

position:7038979:1
position: 7038979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7088978:1
position: 7088978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7038979-7088978:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 7164424..7214423
location: region:7164424-7214423:1
so has part: feature:7164424-7214423:1:region

position:7164424:1
position: 7164424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7214423:1
position: 7214423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7164424-7214423:1:region

LOC102160243
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC102160243
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7214449..7286319)
location: region:7214449-7286319:-1
so has part: feature:7214449-7286319:-1:exon
subclass of: SO_0000011

102160243
type: Gene
SIO_000068: ncbigene

position:7214449:-1
position: 7214449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7286319:-1
position: 7286319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7214449-7286319:-1:exon

LOC102160243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102160243
product: uncharacterized LOC102160243, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002340902.1
SIO_010081: LOC102160243
subclass of: SO_0000673
so part of: LOC102160243
location: complement(join(7214449..7215074,7264004..7264206,7264360..7265046,7268520..7268722,7268876..7269562,7278886..7278995,7279498..7279572,7279711..7279845,7285891..7286319))
location: region:7214449-7286319:-1
so has part: feature:7285891-7286319:-1:exon
so has part: feature:7279711-7279845:-1:exon
so has part: feature:7279498-7279572:-1:exon
so has part: feature:7278886-7278995:-1:exon
so has part: feature:7268876-7269562:-1:exon
so has part: feature:7268520-7268722:-1:exon
so has part: feature:7264360-7265046:-1:exon
so has part: feature:7264004-7264206:-1:exon
so has part: feature:7214449-7215074:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7285891-7286319:-1:exon

position:7285891:-1
position: 7285891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7279711-7279845:-1:exon

position:7279711:-1
position: 7279711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279845:-1
position: 7279845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7279498-7279572:-1:exon

position:7279498:-1
position: 7279498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7279572:-1
position: 7279572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7278886-7278995:-1:exon

position:7278886:-1
position: 7278886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7278995:-1
position: 7278995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7268876-7269562:-1:exon

position:7268876:-1
position: 7268876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7269562:-1
position: 7269562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7268520-7268722:-1:exon

position:7268520:-1
position: 7268520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7268722:-1
position: 7268722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7264360-7265046:-1:exon

position:7264360:-1
position: 7264360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7265046:-1
position: 7265046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7264004-7264206:-1:exon

position:7264004:-1
position: 7264004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7264206:-1
position: 7264206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7214449-7215074:-1:exon

position:7215074:-1
position: 7215074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102160243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102160243
product: uncharacterized LOC102160243, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002340903.1
SIO_010081: LOC102160243
subclass of: SO_0000673
so part of: LOC102160243
location: complement(join(7256724..7257992,7264004..7264206,7264360..7265046,7268520..7268722,7268876..7269562,7278886..7278995,7279498..7279572,7279711..7279845,7285891..7286319))
location: region:7256724-7286319:-1
so has part: feature:7285891-7286319:-1:exon
so has part: feature:7279711-7279845:-1:exon
so has part: feature:7279498-7279572:-1:exon
so has part: feature:7278886-7278995:-1:exon
so has part: feature:7268876-7269562:-1:exon
so has part: feature:7268520-7268722:-1:exon
so has part: feature:7264360-7265046:-1:exon
so has part: feature:7264004-7264206:-1:exon
so has part: feature:7256724-7257992:-1:exon

position:7256724:-1
position: 7256724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285891-7286319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7279711-7279845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7279498-7279572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7278886-7278995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7268876-7269562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7268520-7268722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7264360-7265046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7264004-7264206:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7256724-7257992:-1:exon

position:7257992:-1
position: 7257992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102160243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102160243
product: uncharacterized LOC102160243, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002340905.1
SIO_010081: LOC102160243
subclass of: SO_0000673
so part of: LOC102160243
location: complement(join(7263858..7264206,7264360..7265046,7268520..7268722,7268876..7269562,7278886..7278995,7279498..7279572,7279711..7279845,7280768..7280975,7285891..7286319))
location: region:7263858-7286319:-1
so has part: feature:7285891-7286319:-1:exon
so has part: feature:7280768-7280975:-1:exon
so has part: feature:7279711-7279845:-1:exon
so has part: feature:7279498-7279572:-1:exon
so has part: feature:7278886-7278995:-1:exon
so has part: feature:7268876-7269562:-1:exon
so has part: feature:7268520-7268722:-1:exon
so has part: feature:7264360-7265046:-1:exon
so has part: feature:7263858-7264206:-1:exon

position:7263858:-1
position: 7263858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285891-7286319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7280768-7280975:-1:exon

position:7280768:-1
position: 7280768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280975:-1
position: 7280975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7279711-7279845:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7279498-7279572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7278886-7278995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7268876-7269562:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7268520-7268722:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7264360-7265046:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7263858-7264206:-1:exon

LOC102160243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102160243
product: uncharacterized LOC102160243, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002340904.1
SIO_010081: LOC102160243
subclass of: SO_0000673
so part of: LOC102160243
location: complement(join(7263859..7264206,7264360..7265046,7268520..7268722,7268876..7269562,7278886..7278995,7279498..7279572,7279671..7279845,7285891..7286319))
location: region:7263859-7286319:-1
so has part: feature:7285891-7286319:-1:exon
so has part: feature:7279671-7279845:-1:exon
so has part: feature:7279498-7279572:-1:exon
so has part: feature:7278886-7278995:-1:exon
so has part: feature:7268876-7269562:-1:exon
so has part: feature:7268520-7268722:-1:exon
so has part: feature:7264360-7265046:-1:exon
so has part: feature:7263859-7264206:-1:exon

position:7263859:-1
position: 7263859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285891-7286319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7279671-7279845:-1:exon

position:7279671:-1
position: 7279671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7279498-7279572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7278886-7278995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7268876-7269562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7268520-7268722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7264360-7265046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7263859-7264206:-1:exon

LOC102160243
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC102160243
product: uncharacterized LOC102160243, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_002340901.1
SIO_010081: LOC102160243
subclass of: SO_0000673
so part of: LOC102160243
location: complement(join(7263861..7264206,7264360..7265046,7268520..7268722,7268876..7269562,7278886..7278995,7279498..7279572,7279711..7279845,7285891..7286319))
location: region:7263861-7286319:-1
so has part: feature:7285891-7286319:-1:exon
so has part: feature:7279711-7279845:-1:exon
so has part: feature:7279498-7279572:-1:exon
so has part: feature:7278886-7278995:-1:exon
so has part: feature:7268876-7269562:-1:exon
so has part: feature:7268520-7268722:-1:exon
so has part: feature:7264360-7265046:-1:exon
so has part: feature:7263861-7264206:-1:exon

position:7263861:-1
position: 7263861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7285891-7286319:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7279711-7279845:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7279498-7279572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7278886-7278995:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7268876-7269562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7268520-7268722:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7264360-7265046:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7263861-7264206:-1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 7286334..7336333
location: region:7286334-7336333:1
so has part: feature:7286334-7336333:1:region

position:7286334:1
position: 7286334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7336333:1
position: 7336333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7286334-7336333:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 7406133..7456132
location: region:7406133-7456132:1
so has part: feature:7406133-7456132:1:region

position:7406133:1
position: 7406133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7456132:1
position: 7456132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7406133-7456132:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 7519202..7569201
location: region:7519202-7569201:1
so has part: feature:7519202-7569201:1:region

position:7519202:1
position: 7519202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7569201:1
position: 7569201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7519202-7569201:1:region

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 9823
estimated length: 50000
gap type: between scaffolds
so part of: sequence
location: 7608924..7658923
location: region:7608924-7658923:1
so has part: feature:7608924-7658923:1:region

position:7608924:1
position: 7608924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7658923:1
position: 7658923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7608924-7658923:1:region

XG
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: XG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7661275..7691114
location: region:7661275-7691114:1
so has part: feature:7661275-7691114:1:exon
subclass of: SO_0000010

102166402
type: Gene
SIO_000068: ncbigene

position:7661275:1
position: 7661275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7691114:1
position: 7691114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7661275-7691114:1:exon

XG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: XG
product: Xg blood group
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 24 ESTs, 1 long SRA read, and 90% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080962.1
SIO_010081: XG
subclass of: SO_0000673
so part of: XG
location: join(7661275..7661498,7662527..7662606,7663331..7663354,7665564..7665626,7666456..7666518,7669440..7669502,7671801..7671863,7676142..7676201,7679686..7679727,7680851..7680886,7683035..7683151,7686955..7691114)
location: region:7661275-7691114:1
so has part: feature:7661275-7661498:1:exon
so has part: feature:7662527-7662606:1:exon
so has part: feature:7663331-7663354:1:exon
so has part: feature:7665564-7665626:1:exon
so has part: feature:7666456-7666518:1:exon
so has part: feature:7669440-7669502:1:exon
so has part: feature:7671801-7671863:1:exon
so has part: feature:7676142-7676201:1:exon
so has part: feature:7679686-7679727:1:exon
so has part: feature:7680851-7680886:1:exon
so has part: feature:7683035-7683151:1:exon
so has part: feature:7686955-7691114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7661275-7661498:1:exon

position:7661498:1
position: 7661498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7662527-7662606:1:exon

position:7662527:1
position: 7662527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7662606:1
position: 7662606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7663331-7663354:1:exon

position:7663331:1
position: 7663331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7663354:1
position: 7663354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7665564-7665626:1:exon

position:7665564:1
position: 7665564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7665626:1
position: 7665626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7666456-7666518:1:exon

position:7666456:1
position: 7666456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7666518:1
position: 7666518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7669440-7669502:1:exon

position:7669440:1
position: 7669440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7669502:1
position: 7669502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7671801-7671863:1:exon

position:7671801:1
position: 7671801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7671863:1
position: 7671863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7676142-7676201:1:exon

position:7676142:1
position: 7676142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7676201:1
position: 7676201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7679686-7679727:1:exon

position:7679686:1
position: 7679686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7679727:1
position: 7679727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7680851-7680886:1:exon

position:7680851:1
position: 7680851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7680886:1
position: 7680886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7683035-7683151:1:exon

position:7683035:1
position: 7683035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7683151:1
position: 7683151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7686955-7691114:1:exon

position:7686955:1
position: 7686955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: XG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycoprotein Xg
translation: MAPPPGRPPGLLTQEIDLPPLPCAPRCTLSPPLRVFTCVSSLKNQEAAFGSFKVISSAPNSVPRRTIPHRRLQNAPLAATDTLRVPTGQGDFDLADALDDPEPTKKPSSDIYPKPKPPYPPQPGHPGNSGDIYPRPKPPYPPRPGHPGNGGDVYPRPKPPVHPQPGSYDNSGGFLSDRDLNDGRYPPRPRPPAGGGGGGGGYHPSHGGYGNPSGGGRYRPGPHGSNYGGGDYSTYGNPQGNTIAKIVSPIVSVVVVTLVGAAASYFQYNRRRNCFRTNEPQNV
SIO_010081: XG
subclass of: SO_0000673
so part of: XG
location: join(7661275..7661498,7662527..7662606,7663331..7663354,7665564..7665626,7666456..7666518,7669440..7669502,7671801..7671863,7676142..7676201,7679686..7679727,7680851..7680886,7683035..7683151,7686955..7686971)
location: region:7661275-7686971:1
so has part: feature:7661275-7661498:1:exon
so has part: feature:7662527-7662606:1:exon
so has part: feature:7663331-7663354:1:exon
so has part: feature:7665564-7665626:1:exon
so has part: feature:7666456-7666518:1:exon
so has part: feature:7669440-7669502:1:exon
so has part: feature:7671801-7671863:1:exon
so has part: feature:7676142-7676201:1:exon
so has part: feature:7679686-7679727:1:exon
so has part: feature:7680851-7680886:1:exon
so has part: feature:7683035-7683151:1:exon
so has part: feature:7686955-7686971:1:exon

XP_020936621.1
type: Protein
SIO_000068: ncbiprotein

position:7686971:1
position: 7686971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7661275-7661498:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7662527-7662606:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7663331-7663354:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7665564-7665626:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7666456-7666518:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7669440-7669502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7671801-7671863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7676142-7676201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7679686-7679727:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7680851-7680886:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7683035-7683151:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7686955-7686971:1:exon

LOC110257902
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257902
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7798067..7800618
location: region:7798067-7800618:1
so has part: feature:7798067-7800618:1:exon
subclass of: SO_0000011

110257902
type: Gene
SIO_000068: ncbigene

position:7798067:1
position: 7798067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7800618:1
position: 7800618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7798067-7800618:1:exon

LOC110257902
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257902
product: uncharacterized LOC110257902
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002340912.1
SIO_010081: LOC110257902
subclass of: SO_0000673
so part of: LOC110257902
location: join(7798067..7799158,7800548..7800618)
location: region:7798067-7800618:1
so has part: feature:7798067-7799158:1:exon
so has part: feature:7800548-7800618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7798067-7799158:1:exon

position:7799158:1
position: 7799158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7800548-7800618:1:exon

position:7800548:1
position: 7800548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257917
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7921774..7924267
location: region:7921774-7924267:1
so has part: feature:7921774-7924267:1:exon
subclass of: SO_0000011

110257917
type: Gene
SIO_000068: ncbigene

position:7921774:1
position: 7921774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7924267:1
position: 7924267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7921774-7924267:1:exon

LOC110257917
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257917
product: uncharacterized LOC110257917
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002340924.1
SIO_010081: LOC110257917
subclass of: SO_0000673
so part of: LOC110257917
location: join(7921774..7923492,7923895..7924267)
location: region:7921774-7924267:1
so has part: feature:7921774-7923492:1:exon
so has part: feature:7923895-7924267:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7921774-7923492:1:exon

position:7923492:1
position: 7923492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7923895-7924267:1:exon

position:7923895:1
position: 7923895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257914
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7948303..7969573
location: region:7948303-7969573:1
so has part: feature:7948303-7969573:1:exon
subclass of: SO_0000010

110257914
type: Gene
SIO_000068: ncbigene

position:7948303:1
position: 7948303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7969573:1
position: 7969573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7948303-7969573:1:exon

LOC110257914
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257914
product: translation initiation factor IF-2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_021080920.1
SIO_010081: LOC110257914
subclass of: SO_0000673
so part of: LOC110257914
location: join(7948303..7951665,7969273..7969573)
location: region:7948303-7969573:1
so has part: feature:7948303-7951665:1:exon
so has part: feature:7969273-7969573:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7948303-7951665:1:exon

position:7951665:1
position: 7951665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7969273-7969573:1:exon

position:7969273:1
position: 7969273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257914
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257914
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC110257914
translation: MDHRIYLFTCHLYLIYLSIYLFIYHLSGLVAGAILSLRPHDIRQRLEGGVFPVVPTWGRGRFWHLVGGEWRGRSTPHKAWQDHPAWTSLVSRQSCAPTPCPWPSILPQHLLCPSLLAPPRSVGGPGVLLSRINNGQPPTTAVKVQGSLFSAPCHSRASLGCQASTTCCEHSPAAPPGLAHSTLLPRLHPAAFLRDRPKAPSTQRTHPILTPDSSLGLVPPPGGAGPPGFGGPRPGVAPHPSIHTDLGKARTNEIKSPSRQRQRGSVSKAPLELTSGPRRRTPRSASHPEATAARPRPGSVRPLPSPRLLRGVPAASDHKGCANATTRPRREKPLLSLEAEPRAPSFLLVRRDPEAQTARVALGSRQAARGAALLRRLSASASKTPREAGRVSEPEASAARSVPPDSGPGRRRLRGSPGCRCVPGGFCTRGSGPAPPRPVPVAARAFLDDFLARLHPGEERARSLAPSSRETLPATLPRCRRGTSIRKRP
SIO_010081: LOC110257914
subclass of: SO_0000673
so part of: LOC110257914
location: 7949917..7951386
location: region:7949917-7951386:1
so has part: feature:7949917-7951386:1:exon

XP_020936579.1
type: Protein
SIO_000068: ncbiprotein

position:7949917:1
position: 7949917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7951386:1
position: 7951386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7949917-7951386:1:exon

LOC110257931
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8130063..8137891)
location: region:8130063-8137891:-1
so has part: feature:8130063-8137891:-1:exon
subclass of: SO_0000010

110257931
type: Gene
SIO_000068: ncbigene

position:8130063:-1
position: 8130063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8137891:-1
position: 8137891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8130063-8137891:-1:exon

LOC110257931
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257931
product: acetylserotonin O-methyltransferase-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_021080927.1
SIO_010081: LOC110257931
subclass of: SO_0000673
so part of: LOC110257931
location: complement(join(8130063..8131166,8136446..8137891))
location: region:8130063-8137891:-1
so has part: feature:8136446-8137891:-1:exon
so has part: feature:8130063-8131166:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8136446-8137891:-1:exon

position:8136446:-1
position: 8136446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8130063-8131166:-1:exon

position:8131166:-1
position: 8131166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257931
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257931
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acetylserotonin O-methyltransferase-like
translation: MSRTGRRSPGHASCVAGDFFKDPLPEADLYLLARVLHDWTDDKCSRLLARIHGACRTGGGILVIESLLDADGRGPLTTQLYSLNMLVQTEGRERTPAQYRALLAPAGFHDIQCRRTGGTYDAILARK
SIO_010081: LOC110257931
subclass of: SO_0000673
so part of: LOC110257931
location: complement(join(8130955..8131166,8136446..8136617))
location: region:8130955-8136617:-1
so has part: feature:8136446-8136617:-1:exon
so has part: feature:8130955-8131166:-1:exon

XP_020936586.1
type: Protein
SIO_000068: ncbiprotein

position:8130955:-1
position: 8130955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8136617:-1
position: 8136617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8136446-8136617:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8130955-8131166:-1:exon

LOC110257912
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8589358..8592598
location: region:8589358-8592598:1
so has part: feature:8589358-8592598:1:exon
subclass of: SO_0000011

110257912
type: Gene
SIO_000068: ncbigene

position:8589358:1
position: 8589358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8592598:1
position: 8592598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8589358-8592598:1:exon

LOC110257912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257912
product: uncharacterized LOC110257912
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_002340920.1
SIO_010081: LOC110257912
subclass of: SO_0000673
so part of: LOC110257912
location: join(8589358..8589614,8591099..8592598)
location: region:8589358-8592598:1
so has part: feature:8589358-8589614:1:exon
so has part: feature:8591099-8592598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8589358-8589614:1:exon

position:8589614:1
position: 8589614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8591099-8592598:1:exon

position:8591099:1
position: 8591099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100626157
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100626157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8727621..8734640)
location: region:8727621-8734640:-1
so has part: feature:8727621-8734640:-1:exon
subclass of: SO_0000010

100626157
type: Gene
SIO_000068: ncbigene

position:8727621:-1
position: 8727621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8734640:-1
position: 8734640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8727621-8734640:-1:exon

LOC100626157
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100626157
product: odorant-binding protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_021080877.1
SIO_010081: LOC100626157
subclass of: SO_0000673
so part of: LOC100626157
location: complement(join(8727621..8727640,8727847..8727948,8729153..8729263,8731811..8731881,8733967..8734118,8734563..8734640))
location: region:8727621-8734640:-1
so has part: feature:8734563-8734640:-1:exon
so has part: feature:8733967-8734118:-1:exon
so has part: feature:8731811-8731881:-1:exon
so has part: feature:8729153-8729263:-1:exon
so has part: feature:8727847-8727948:-1:exon
so has part: feature:8727621-8727640:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8734563-8734640:-1:exon

position:8734563:-1
position: 8734563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8733967-8734118:-1:exon

position:8733967:-1
position: 8733967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8734118:-1
position: 8734118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8731811-8731881:-1:exon

position:8731811:-1
position: 8731811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8731881:-1
position: 8731881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8729153-8729263:-1:exon

position:8729153:-1
position: 8729153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8729263:-1
position: 8729263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8727847-8727948:-1:exon

position:8727847:-1
position: 8727847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8727948:-1
position: 8727948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8727621-8727640:-1:exon

position:8727640:-1
position: 8727640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100626157
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100626157
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: odorant-binding protein-like
translation: MKSLLLSLVLGLVCAQEPQPEQDPFEYFFLASGKWITSYIGSSDLEKIGENAPFQVFMRSIEFDDKESKVYLNFFSKENGICEEFSLIGTKQEGNTYDVNYAGNNKFVVSYASETALIISNINVDEEGDKTIMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIERDDCPAK
SIO_010081: LOC100626157
subclass of: SO_0000673
so part of: LOC100626157
location: complement(join(8727621..8727640,8727847..8727948,8729153..8729263,8731811..8731881,8733967..8734118,8734563..8734640))
location: region:8727621-8734640:-1
so has part: feature:8734563-8734640:-1:exon
so has part: feature:8733967-8734118:-1:exon
so has part: feature:8731811-8731881:-1:exon
so has part: feature:8729153-8729263:-1:exon
so has part: feature:8727847-8727948:-1:exon
so has part: feature:8727621-8727640:-1:exon

XP_020936536.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8734563-8734640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8733967-8734118:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8731811-8731881:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8729153-8729263:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8727847-8727948:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8727621-8727640:-1:exon

LOC110255320
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110255320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8937949..9087971)
location: region:8937949-9087971:-1
so has part: feature:8937949-9087971:-1:exon
subclass of: SO_0000010

110255320
type: Gene
SIO_000068: ncbigene

position:8937949:-1
position: 8937949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9087971:-1
position: 9087971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8937949-9087971:-1:exon

LOC110255320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255320
product: lysine-specific demethylase 6A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 6 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_021080980.1
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8937949..8938941,8944294..8945069,8953984..8954367,8956664..8956759,8957245..8957400,8957850..8957984,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087971))
location: region:8937949-9087971:-1
so has part: feature:9087470-9087971:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957850-8957984:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8953984-8954367:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8937949-8938941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087971:-1:exon

position:9087470:-1
position: 9087470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

position:9087214:-1
position: 9087214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9087277:-1
position: 9087277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

position:9062573:-1
position: 9062573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9062681:-1
position: 9062681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

position:9022601:-1
position: 9022601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9022650:-1
position: 9022650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

position:9013157:-1
position: 9013157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9013215:-1
position: 9013215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

position:9009202:-1
position: 9009202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9009322:-1
position: 9009322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

position:8991190:-1
position: 8991190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8991244:-1
position: 8991244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

position:8988526:-1
position: 8988526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8988560:-1
position: 8988560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

position:8964298:-1
position: 8964298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8964391:-1
position: 8964391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

position:8962390:-1
position: 8962390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8962516:-1
position: 8962516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

position:8958832:-1
position: 8958832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8958930:-1
position: 8958930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

position:8958500:-1
position: 8958500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8958719:-1
position: 8958719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:8957850-8957984:-1:exon

position:8957850:-1
position: 8957850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8957984:-1
position: 8957984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:8957245-8957400:-1:exon

position:8957245:-1
position: 8957245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8957400:-1
position: 8957400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:8956664-8956759:-1:exon

position:8956664:-1
position: 8956664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8956759:-1
position: 8956759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8953984-8954367:-1:exon

position:8953984:-1
position: 8953984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8954367:-1
position: 8954367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8944294-8945069:-1:exon

position:8944294:-1
position: 8944294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8945069:-1
position: 8945069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:8937949-8938941:-1:exon

position:8938941:-1
position: 8938941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110255320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255320
product: lysine-specific demethylase 6A-like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 9 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_021080983.1
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8937949..8938941,8944294..8945069,8953984..8954073,8955220..8955315,8956664..8956759,8957245..8957400,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087970))
location: region:8937949-9087970:-1
so has part: feature:9087470-9087970:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954073:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8937949-8938941:-1:exon

position:9087970:-1
position: 9087970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8955220-8955315:-1:exon

position:8955220:-1
position: 8955220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8955315:-1
position: 8955315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:8953984-8954073:-1:exon

position:8954073:-1
position: 8954073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8937949-8938941:-1:exon

LOC110255320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255320
product: lysine-specific demethylase 6A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 8 long SRA reads, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_021080981.1
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8937949..8938941,8944294..8945069,8953984..8954367,8955220..8955315,8956664..8956759,8957245..8957400,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087970))
location: region:8937949-9087970:-1
so has part: feature:9087470-9087970:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954367:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8937949-8938941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8955220-8955315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8953984-8954367:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8937949-8938941:-1:exon

LOC110255320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255320
product: lysine-specific demethylase 6A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 8 long SRA reads, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_021080982.1
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8937949..8938941,8944294..8945069,8953984..8954073,8955220..8955315,8956664..8956759,8957245..8957400,8957850..8957984,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087970))
location: region:8937949-9087970:-1
so has part: feature:9087470-9087970:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957850-8957984:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954073:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8937949-8938941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957850-8957984:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8955220-8955315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8953984-8954073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8937949-8938941:-1:exon

LOC110255320
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255320
product: lysine-specific demethylase 6A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 6 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_021080978.1
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8937949..8938941,8944294..8945069,8953984..8954367,8955220..8955315,8956664..8956759,8957245..8957400,8957850..8957984,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087970))
location: region:8937949-9087970:-1
so has part: feature:9087470-9087970:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957850-8957984:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954367:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8937949-8938941:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087970:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957850-8957984:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8955220-8955315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8953984-8954367:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8937949-8938941:-1:exon

LOC110255320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110255320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6A-like isoform X5
translation: MKSCGVSLAAAAAVFGDEEKKMAAGKASGETKESSLSLTTEEKEALSGMDSRLFGFVSLHEDGARTKTLLGKAVRCYESLILKAEGKVESEFFCQLGHFNLLLEDYPKALSAYQRYYSLQSDYWQNATFLYGLGLVYFYYNAFHWAIKAFREVLYVDPSFCRAKEIHLRLGLMFKVNTDYVSSLKHFQLALIDSNPCTLSSVEIQFHIAHLYETQRNYHSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNVDLLGDKATKESYAIQYLQRSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSVLTGRIKFLQAYKAHHPNTEPVLGLNQTPISQQSLPVHMITSSQIDGLSSPAKKKRTSSPTKNSSENWDSGQSVSHASVQQQVHSWSLTPQKLQHLEQLRTNRDNLNPTQKLMLEQLESQFFLMQQLNTLTLPHNCTNLTSRTEEPWRKQLSHSTQGLHKGQSAHLAGPNDGQPSFSSSPLQYLQATSTDTQKKTGHRTLPSSSVIQGAALSHLSSNIATSGGQQGINFTKDSTPSGNRSLVPETIRLVGDTPNGCADIKGLSNHIRQLMTEPVCSPNHGDLTSPNLISDNPKISALLIEKTNDSVMTGACDKVNNIHPENHTKANSFVGSSPSSVISTTASSPKSVEKTTTNGITSLNSPHGRLQTINGEGLENSQSSKKADLPVITYKPDPQIIPSMSVSIYSNSAEVLKACRNLGKNGLSNSHILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYVSLITS
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8938791..8938941,8944294..8945069,8953984..8954073,8955220..8955315,8956664..8956759,8957245..8957400,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087621))
location: region:8938791-9087621:-1
so has part: feature:9087470-9087621:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954073:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8938791-8938941:-1:exon

XP_020936642.1
type: Protein
SIO_000068: ncbiprotein

position:8938791:-1
position: 8938791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9087621:-1
position: 9087621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8955220-8955315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8953984-8954073:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8938791-8938941:-1:exon

LOC110255320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110255320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6A-like isoform X3
translation: MKSCGVSLAAAAAVFGDEEKKMAAGKASGETKESSLSLTTEEKEALSGMDSRLFGFVSLHEDGARTKTLLGKAVRCYESLILKAEGKVESEFFCQLGHFNLLLEDYPKALSAYQRYYSLQSDYWQNATFLYGLGLVYFYYNAFHWAIKAFREVLYVDPSFCRAKEIHLRLGLMFKVNTDYVSSLKHFQLALIDSNPCTLSSVEIQFHIAHLYETQRNYHSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNVDLLGDKATKESYAIQYLQRSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSVLTGRIKFLQAYKAHHPNTEPVLGLNQTPISQQSLPVHMITSSQIDGLSSPAKKKRTSSPTKNSSENWDSGQSVSHASVQQQVHSWSLTPQKLQHLEQLRTNRDNLNPTQKLMLEQLESQFFLMQQMRQTGQSTGIPNGPKADSSLPTSSLSSQQPHSALPRVPSVSQPEVHSAYFEKPLSDGPFPAGYTACVTSETLGSTDTTLAGNAYVTGSGNNVNVPYLQLNTLTLPHNCTNLTSRTEEPWRKQLSHSTQGLHKGQSAHLAGPNDGQPSFSSSPLQYLQATSTDTQKKTGHRTLPSSSVIQGAALSHLSSNIATSGGQQGINFTKDSTPSGNRSLVPETIRLVGDTPNGCADIKGLSNHIRQLMTEPVCSPNHGDLTSPNLISDNPKISALLIEKTNDSVMTGACDKVNNIHPENHTKANSFVGSSPSSVISTTASSPKSVEKTTTNGITSLNSPHGRLQTINGEGLENSQSSKKADLPVITYKPDPQIIPSMSVSIYSNSAEVLKACRNLGKNGLSNSHILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYVSLITS
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8938791..8938941,8944294..8945069,8953984..8954367,8955220..8955315,8956664..8956759,8957245..8957400,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087621))
location: region:8938791-9087621:-1
so has part: feature:9087470-9087621:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954367:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8938791-8938941:-1:exon

XP_020936640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8955220-8955315:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8953984-8954367:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8938791-8938941:-1:exon

LOC110255320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110255320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6A-like isoform X2
translation: MKSCGVSLAAAAAVFGDEEKKMAAGKASGETKESSLSLTTEEKEALSGMDSRLFGFVSLHEDGARTKTLLGKAVRCYESLILKAEGKVESEFFCQLGHFNLLLEDYPKALSAYQRYYSLQSDYWQNATFLYGLGLVYFYYNAFHWAIKAFREVLYVDPSFCRAKEIHLRLGLMFKVNTDYVSSLKHFQLALIDSNPCTLSSVEIQFHIAHLYETQRNYHSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNVDLLGDKATKESYAIQYLQRSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSVLTGRIKFLQAQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQAYKAHHPNTEPVLGLNQTPISQQSLPVHMITSSQIDGLSSPAKKKRTSSPTKNSSENWDSGQSVSHASVQQQVHSWSLTPQKLQMRQTGQSTGIPNGPKADSSLPTSSLSSQQPHSALPRVPSVSQPEVHSAYFEKPLSDGPFPAGYTACVTSETLGSTDTTLAGNAYVTGSGNNVNVPYLQLNTLTLPHNCTNLTSRTEEPWRKQLSHSTQGLHKGQSAHLAGPNDGQPSFSSSPLQYLQATSTDTQKKTGHRTLPSSSVIQGAALSHLSSNIATSGGQQGINFTKDSTPSGNRSLVPETIRLVGDTPNGCADIKGLSNHIRQLMTEPVCSPNHGDLTSPNLISDNPKISALLIEKTNDSVMTGACDKVNNIHPENHTKANSFVGSSPSSVISTTASSPKSVEKTTTNGITSLNSPHGRLQTINGEGLENSQSSKKADLPVITYKPDPQIIPSMSVSIYSNSAEVLKACRNLGKNGLSNSHILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYVSLITS
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8938791..8938941,8944294..8945069,8953984..8954367,8956664..8956759,8957245..8957400,8957850..8957984,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087621))
location: region:8938791-9087621:-1
so has part: feature:9087470-9087621:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957850-8957984:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8953984-8954367:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8938791-8938941:-1:exon

XP_020936639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957850-8957984:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8953984-8954367:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8938791-8938941:-1:exon

LOC110255320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110255320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6A-like isoform X4
translation: MKSCGVSLAAAAAVFGDEEKKMAAGKASGETKESSLSLTTEEKEALSGMDSRLFGFVSLHEDGARTKTLLGKAVRCYESLILKAEGKVESEFFCQLGHFNLLLEDYPKALSAYQRYYSLQSDYWQNATFLYGLGLVYFYYNAFHWAIKAFREVLYVDPSFCRAKEIHLRLGLMFKVNTDYVSSLKHFQLALIDSNPCTLSSVEIQFHIAHLYETQRNYHSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNVDLLGDKATKESYAIQYLQRSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSVLTGRIKFLQAQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQAYKAHHPNTEPVLGLNQTPISQQSLPVHMITSSQIDGLSSPAKKKRTSSPTKNSSENWDSGQSVSHASVQQQVHSWSLTPQKLQHLEQLRTNRDNLNPTQKLMLEQLESQFFLMQQLNTLTLPHNCTNLTSRTEEPWRKQLSHSTQGLHKGQSAHLAGPNDGQPSFSSSPLQYLQATSTDTQKKTGHRTLPSSSVIQGAALSHLSSNIATSGGQQGINFTKDSTPSGNRSLVPETIRLVGDTPNGCADIKGLSNHIRQLMTEPVCSPNHGDLTSPNLISDNPKISALLIEKTNDSVMTGACDKVNNIHPENHTKANSFVGSSPSSVISTTASSPKSVEKTTTNGITSLNSPHGRLQTINGEGLENSQSSKKADLPVITYKPDPQIIPSMSVSIYSNSAEVLKACRNLGKNGLSNSHILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYVSLITS
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8938791..8938941,8944294..8945069,8953984..8954073,8955220..8955315,8956664..8956759,8957245..8957400,8957850..8957984,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087621))
location: region:8938791-9087621:-1
so has part: feature:9087470-9087621:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957850-8957984:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954073:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8938791-8938941:-1:exon

XP_020936641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957850-8957984:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8955220-8955315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8953984-8954073:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8938791-8938941:-1:exon

LOC110255320
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110255320
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 6A-like isoform X1
translation: MKSCGVSLAAAAAVFGDEEKKMAAGKASGETKESSLSLTTEEKEALSGMDSRLFGFVSLHEDGARTKTLLGKAVRCYESLILKAEGKVESEFFCQLGHFNLLLEDYPKALSAYQRYYSLQSDYWQNATFLYGLGLVYFYYNAFHWAIKAFREVLYVDPSFCRAKEIHLRLGLMFKVNTDYVSSLKHFQLALIDSNPCTLSSVEIQFHIAHLYETQRNYHSAKEAYEQLLQTENLPAQVKATVLQQLGWMHHNVDLLGDKATKESYAIQYLQRSLEADPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSVLTGRIKFLQAQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQAYKAHHPNTEPVLGLNQTPISQQSLPVHMITSSQIDGLSSPAKKKRTSSPTKNSSENWDSGQSVSHASVQQQVHSWSLTPQKLQHLEQLRTNRDNLNPTQKLMLEQLESQFFLMQQMRQTGQSTGIPNGPKADSSLPTSSLSSQQPHSALPRVPSVSQPEVHSAYFEKPLSDGPFPAGYTACVTSETLGSTDTTLAGNAYVTGSGNNVNVPYLQLNTLTLPHNCTNLTSRTEEPWRKQLSHSTQGLHKGQSAHLAGPNDGQPSFSSSPLQYLQATSTDTQKKTGHRTLPSSSVIQGAALSHLSSNIATSGGQQGINFTKDSTPSGNRSLVPETIRLVGDTPNGCADIKGLSNHIRQLMTEPVCSPNHGDLTSPNLISDNPKISALLIEKTNDSVMTGACDKVNNIHPENHTKANSFVGSSPSSVISTTASSPKSVEKTTTNGITSLNSPHGRLQTINGEGLENSQSSKKADLPVITYKPDPQIIPSMSVSIYSNSAEVLKACRNLGKNGLSNSHILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYVSLITS
SIO_010081: LOC110255320
subclass of: SO_0000673
so part of: LOC110255320
location: complement(join(8938791..8938941,8944294..8945069,8953984..8954367,8955220..8955315,8956664..8956759,8957245..8957400,8957850..8957984,8958500..8958719,8958832..8958930,8962390..8962516,8964298..8964391,8988526..8988560,8991190..8991244,9009202..9009322,9013157..9013215,9022601..9022650,9062573..9062681,9087214..9087277,9087470..9087621))
location: region:8938791-9087621:-1
so has part: feature:9087470-9087621:-1:exon
so has part: feature:9087214-9087277:-1:exon
so has part: feature:9062573-9062681:-1:exon
so has part: feature:9022601-9022650:-1:exon
so has part: feature:9013157-9013215:-1:exon
so has part: feature:9009202-9009322:-1:exon
so has part: feature:8991190-8991244:-1:exon
so has part: feature:8988526-8988560:-1:exon
so has part: feature:8964298-8964391:-1:exon
so has part: feature:8962390-8962516:-1:exon
so has part: feature:8958832-8958930:-1:exon
so has part: feature:8958500-8958719:-1:exon
so has part: feature:8957850-8957984:-1:exon
so has part: feature:8957245-8957400:-1:exon
so has part: feature:8956664-8956759:-1:exon
so has part: feature:8955220-8955315:-1:exon
so has part: feature:8953984-8954367:-1:exon
so has part: feature:8944294-8945069:-1:exon
so has part: feature:8938791-8938941:-1:exon

XP_020936637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9087470-9087621:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9087214-9087277:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9062573-9062681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9022601-9022650:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9013157-9013215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9009202-9009322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8991190-8991244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8988526-8988560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8964298-8964391:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8962390-8962516:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:8958832-8958930:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:8958500-8958719:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:8957850-8957984:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:8957245-8957400:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:8956664-8956759:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:8955220-8955315:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:8953984-8954367:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:8944294-8945069:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:8938791-8938941:-1:exon

LOC100624739
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100624739
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9145306..9146214)
location: region:9145306-9146214:-1
so has part: feature:9145306-9146214:-1:exon

100624739
type: Gene
SIO_000068: ncbigene

position:9145306:-1
position: 9145306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9146214:-1
position: 9146214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9145306-9146214:-1:exon

LOC100624739
type: Exon
subclass of: SO_0000147
RO_0002162: 9823
gene: LOC100624739
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 70% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100624739
subclass of: SO_0000673
so part of: LOC100624739
location: complement(9145306..9146214)
location: region:9145306-9146214:-1
so has part: feature:9145306-9146214:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9145306-9146214:-1:exon

LOC100624590
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100624590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9155794..9170628)
location: region:9155794-9170628:-1
so has part: feature:9155794-9170628:-1:exon
subclass of: SO_0000010

100624590
type: Gene
SIO_000068: ncbigene

position:9155794:-1
position: 9155794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9170628:-1
position: 9170628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9155794-9170628:-1:exon

LOC100624590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624590
product: ATP-dependent RNA helicase DDX3X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 47 ESTs, 296 long SRA reads, 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_013991065.2
SIO_010081: LOC100624590
subclass of: SO_0000673
so part of: LOC100624590
location: complement(join(9155794..9155944,9156164..9156297,9156593..9156746,9157226..9157343,9157421..9157602,9157829..9157973,9158206..9158350,9158584..9158744,9158823..9158921,9159175..9159260,9160123..9160258,9160867..9160966,9161041..9161199,9162078..9162207,9166259..9166306,9167482..9167542,9170403..9170628))
location: region:9155794-9170628:-1
so has part: feature:9170403-9170628:-1:exon
so has part: feature:9167482-9167542:-1:exon
so has part: feature:9166259-9166306:-1:exon
so has part: feature:9162078-9162207:-1:exon
so has part: feature:9161041-9161199:-1:exon
so has part: feature:9160867-9160966:-1:exon
so has part: feature:9160123-9160258:-1:exon
so has part: feature:9159175-9159260:-1:exon
so has part: feature:9158823-9158921:-1:exon
so has part: feature:9158584-9158744:-1:exon
so has part: feature:9158206-9158350:-1:exon
so has part: feature:9157829-9157973:-1:exon
so has part: feature:9157421-9157602:-1:exon
so has part: feature:9157226-9157343:-1:exon
so has part: feature:9156593-9156746:-1:exon
so has part: feature:9156164-9156297:-1:exon
so has part: feature:9155794-9155944:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9170403-9170628:-1:exon

position:9170403:-1
position: 9170403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9167482-9167542:-1:exon

position:9167482:-1
position: 9167482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9167542:-1
position: 9167542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9166259-9166306:-1:exon

position:9166259:-1
position: 9166259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9166306:-1
position: 9166306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9162078-9162207:-1:exon

position:9162078:-1
position: 9162078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9162207:-1
position: 9162207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9161041-9161199:-1:exon

position:9161041:-1
position: 9161041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9161199:-1
position: 9161199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9160867-9160966:-1:exon

position:9160867:-1
position: 9160867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9160966:-1
position: 9160966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9160123-9160258:-1:exon

position:9160123:-1
position: 9160123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9160258:-1
position: 9160258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9159175-9159260:-1:exon

position:9159175:-1
position: 9159175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9159260:-1
position: 9159260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9158823-9158921:-1:exon

position:9158823:-1
position: 9158823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9158921:-1
position: 9158921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9158584-9158744:-1:exon

position:9158584:-1
position: 9158584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9158744:-1
position: 9158744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9158206-9158350:-1:exon

position:9158206:-1
position: 9158206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9158350:-1
position: 9158350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9157829-9157973:-1:exon

position:9157829:-1
position: 9157829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9157973:-1
position: 9157973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9157421-9157602:-1:exon

position:9157421:-1
position: 9157421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9157602:-1
position: 9157602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9157226-9157343:-1:exon

position:9157226:-1
position: 9157226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9157343:-1
position: 9157343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9156593-9156746:-1:exon

position:9156593:-1
position: 9156593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9156746:-1
position: 9156746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9156164-9156297:-1:exon

position:9156164:-1
position: 9156164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9156297:-1
position: 9156297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9155794-9155944:-1:exon

position:9155944:-1
position: 9155944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100624590
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624590
product: ATP-dependent RNA helicase DDX3X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 41 ESTs, 140 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_013991064.2
SIO_010081: LOC100624590
subclass of: SO_0000673
so part of: LOC100624590
location: complement(join(9155794..9155944,9156164..9156297,9156593..9156746,9157226..9157343,9157421..9157602,9157829..9157973,9158206..9158350,9158584..9158744,9158823..9158921,9159175..9159260,9160123..9160258,9160867..9160966,9161041..9161199,9162078..9162207,9166259..9166306,9167482..9167542,9169612..9169770,9170403..9170578))
location: region:9155794-9170578:-1
so has part: feature:9170403-9170578:-1:exon
so has part: feature:9169612-9169770:-1:exon
so has part: feature:9167482-9167542:-1:exon
so has part: feature:9166259-9166306:-1:exon
so has part: feature:9162078-9162207:-1:exon
so has part: feature:9161041-9161199:-1:exon
so has part: feature:9160867-9160966:-1:exon
so has part: feature:9160123-9160258:-1:exon
so has part: feature:9159175-9159260:-1:exon
so has part: feature:9158823-9158921:-1:exon
so has part: feature:9158584-9158744:-1:exon
so has part: feature:9158206-9158350:-1:exon
so has part: feature:9157829-9157973:-1:exon
so has part: feature:9157421-9157602:-1:exon
so has part: feature:9157226-9157343:-1:exon
so has part: feature:9156593-9156746:-1:exon
so has part: feature:9156164-9156297:-1:exon
so has part: feature:9155794-9155944:-1:exon

position:9170578:-1
position: 9170578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9170403-9170578:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9169612-9169770:-1:exon

position:9169612:-1
position: 9169612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9169770:-1
position: 9169770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9167482-9167542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9166259-9166306:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9162078-9162207:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9161041-9161199:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9160867-9160966:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9160123-9160258:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9159175-9159260:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9158823-9158921:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9158584-9158744:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9158206-9158350:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9157829-9157973:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9157421-9157602:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9157226-9157343:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9156593-9156746:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9156164-9156297:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9155794-9155944:-1:exon

LOC100624590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX3X isoform X2
translation: MSHVVVENALGLDQQFAGLDLNSSDNQSGGGSTASKGRYIPPHLRNREASKGYYDKDSSGWSCSKDKDAYSSFGSRDSRGKPSYFSDRGSGTRGRFDDRGRNDYDGMGSRGDRTGFGKFERSGHSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKRFSGGFGARDYRQSSSSGSSTFSSSRAGSSRSGGGGHSSSRGFSGGGYGSFYNSDGYGGNYNSQGVDWWGN
SIO_010081: LOC100624590
subclass of: SO_0000673
so part of: LOC100624590
location: complement(join(9155865..9155944,9156164..9156297,9156593..9156746,9157226..9157343,9157421..9157602,9157829..9157973,9158206..9158350,9158584..9158744,9158823..9158921,9159175..9159260,9160123..9160258,9160867..9160966,9161041..9161199,9162078..9162207,9166259..9166306,9167482..9167542,9170403..9170447))
location: region:9155865-9170447:-1
so has part: feature:9170403-9170447:-1:exon
so has part: feature:9167482-9167542:-1:exon
so has part: feature:9166259-9166306:-1:exon
so has part: feature:9162078-9162207:-1:exon
so has part: feature:9161041-9161199:-1:exon
so has part: feature:9160867-9160966:-1:exon
so has part: feature:9160123-9160258:-1:exon
so has part: feature:9159175-9159260:-1:exon
so has part: feature:9158823-9158921:-1:exon
so has part: feature:9158584-9158744:-1:exon
so has part: feature:9158206-9158350:-1:exon
so has part: feature:9157829-9157973:-1:exon
so has part: feature:9157421-9157602:-1:exon
so has part: feature:9157226-9157343:-1:exon
so has part: feature:9156593-9156746:-1:exon
so has part: feature:9156164-9156297:-1:exon
so has part: feature:9155865-9155944:-1:exon

XP_013846519.1
type: Protein
SIO_000068: ncbiprotein

position:9155865:-1
position: 9155865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9170447:-1
position: 9170447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9170403-9170447:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9167482-9167542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9166259-9166306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9162078-9162207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9161041-9161199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9160867-9160966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9160123-9160258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9159175-9159260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9158823-9158921:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9158584-9158744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9158206-9158350:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9157829-9157973:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9157421-9157602:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9157226-9157343:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9156593-9156746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9156164-9156297:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9155865-9155944:-1:exon

LOC100624590
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP-dependent RNA helicase DDX3X isoform X1
translation: MAAACFSPLLSAYNEVGLRHGDSWEFAGLDLNSSDNQSGGGSTASKGRYIPPHLRNREASKGYYDKDSSGWSCSKDKDAYSSFGSRDSRGKPSYFSDRGSGTRGRFDDRGRNDYDGMGSRGDRTGFGKFERSGHSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKRFSGGFGARDYRQSSSSGSSTFSSSRAGSSRSGGGGHSSSRGFSGGGYGSFYNSDGYGGNYNSQGVDWWGN
SIO_010081: LOC100624590
subclass of: SO_0000673
so part of: LOC100624590
location: complement(join(9155865..9155944,9156164..9156297,9156593..9156746,9157226..9157343,9157421..9157602,9157829..9157973,9158206..9158350,9158584..9158744,9158823..9158921,9159175..9159260,9160123..9160258,9160867..9160966,9161041..9161199,9162078..9162207,9166259..9166306,9167482..9167542,9169612..9169686))
location: region:9155865-9169686:-1
so has part: feature:9169612-9169686:-1:exon
so has part: feature:9167482-9167542:-1:exon
so has part: feature:9166259-9166306:-1:exon
so has part: feature:9162078-9162207:-1:exon
so has part: feature:9161041-9161199:-1:exon
so has part: feature:9160867-9160966:-1:exon
so has part: feature:9160123-9160258:-1:exon
so has part: feature:9159175-9159260:-1:exon
so has part: feature:9158823-9158921:-1:exon
so has part: feature:9158584-9158744:-1:exon
so has part: feature:9158206-9158350:-1:exon
so has part: feature:9157829-9157973:-1:exon
so has part: feature:9157421-9157602:-1:exon
so has part: feature:9157226-9157343:-1:exon
so has part: feature:9156593-9156746:-1:exon
so has part: feature:9156164-9156297:-1:exon
so has part: feature:9155865-9155944:-1:exon

XP_013846518.1
type: Protein
SIO_000068: ncbiprotein

position:9169686:-1
position: 9169686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9169612-9169686:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9167482-9167542:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9166259-9166306:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9162078-9162207:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9161041-9161199:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9160867-9160966:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9160123-9160258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9159175-9159260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9158823-9158921:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9158584-9158744:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9158206-9158350:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9157829-9157973:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9157421-9157602:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9157226-9157343:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9156593-9156746:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9156164-9156297:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9155865-9155944:-1:exon

LOC396706
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC396706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9174391..9227673
location: region:9174391-9227673:1
so has part: feature:9174391-9227673:1:exon
subclass of: SO_0000010

396706
type: Gene
SIO_000068: ncbigene

position:9174391:1
position: 9174391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9227673:1
position: 9227673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9174391-9227673:1:exon

LOC396706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC396706
product: U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_021080963.1
SIO_010081: LOC396706
subclass of: SO_0000673
so part of: LOC396706
location: join(9174391..9174402,9174478..9174680,9175005..9175084,9201021..9201108,9207629..9207734,9209666..9209752,9212628..9212746,9214280..9214493,9227430..9227673)
location: region:9174391-9227673:1
so has part: feature:9174391-9174402:1:exon
so has part: feature:9174478-9174680:1:exon
so has part: feature:9175005-9175084:1:exon
so has part: feature:9201021-9201108:1:exon
so has part: feature:9207629-9207734:1:exon
so has part: feature:9209666-9209752:1:exon
so has part: feature:9212628-9212746:1:exon
so has part: feature:9214280-9214493:1:exon
so has part: feature:9227430-9227673:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9174391-9174402:1:exon

position:9174402:1
position: 9174402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9174478-9174680:1:exon

position:9174478:1
position: 9174478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9174680:1
position: 9174680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9175005-9175084:1:exon

position:9175005:1
position: 9175005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9175084:1
position: 9175084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9201021-9201108:1:exon

position:9201021:1
position: 9201021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9201108:1
position: 9201108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9207629-9207734:1:exon

position:9207629:1
position: 9207629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9207734:1
position: 9207734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9209666-9209752:1:exon

position:9209666:1
position: 9209666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9209752:1
position: 9209752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9212628-9212746:1:exon

position:9212628:1
position: 9212628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9212746:1
position: 9212746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9214280-9214493:1:exon

position:9214280:1
position: 9214280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9214493:1
position: 9214493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9227430-9227673:1:exon

position:9227430:1
position: 9227430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC396706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC396706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2
translation: MKSFVIERSLRKRDSDRSLPTIQLWFTTGENAVLRLRVIVSAIKPALSGLFRSAEWWGKVAGPENMFPGKPNHKRYRAALKKEKRKKRRQELARLRDSVPSGLSQKEEEDAAVIEKQLKEEKLLAIERQTLHEEWLLREQKAQENFKIKEKNEAARKQQEKEERKLREEWEEHLRKEREEEEQKLHKKREKELENGATWQNPEPPTDLRMMEKDRAHCPFYIKTGACRFGDKCSRKHSFPASSPTLLIKSMFTTFGMEQCRRDDYDPDASLEYSEEETYQQFLDFYDDVLPEFKNVGKVVQFKVSCNLEPHLRGNVYVQYQS
SIO_010081: LOC396706
subclass of: SO_0000673
so part of: LOC396706
location: join(9174391..9174402,9174478..9174680,9175005..9175084,9201021..9201108,9207629..9207734,9209666..9209752,9212628..9212746,9214280..9214493,9227430..9227489)
location: region:9174391-9227489:1
so has part: feature:9174391-9174402:1:exon
so has part: feature:9174478-9174680:1:exon
so has part: feature:9175005-9175084:1:exon
so has part: feature:9201021-9201108:1:exon
so has part: feature:9207629-9207734:1:exon
so has part: feature:9209666-9209752:1:exon
so has part: feature:9212628-9212746:1:exon
so has part: feature:9214280-9214493:1:exon
so has part: feature:9227430-9227489:1:exon

XP_020936622.1
type: Protein
SIO_000068: ncbiprotein

position:9227489:1
position: 9227489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9174391-9174402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9174478-9174680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9175005-9175084:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9201021-9201108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9207629-9207734:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9209666-9209752:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9212628-9212746:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9214280-9214493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9227430-9227489:1:exon

LOC106508250
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC106508250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9363786..9368140)
location: region:9363786-9368140:-1
so has part: feature:9363786-9368140:-1:exon
subclass of: SO_0000011

106508250
type: Gene
SIO_000068: ncbigene

position:9363786:-1
position: 9363786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9368140:-1
position: 9368140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9363786-9368140:-1:exon

LOC106508250
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC106508250
product: uncharacterized LOC106508250
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_001304977.2
SIO_010081: LOC106508250
subclass of: SO_0000673
so part of: LOC106508250
location: complement(join(9363786..9365404,9367442..9367560,9367919..9368140))
location: region:9363786-9368140:-1
so has part: feature:9367919-9368140:-1:exon
so has part: feature:9367442-9367560:-1:exon
so has part: feature:9363786-9365404:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9367919-9368140:-1:exon

position:9367919:-1
position: 9367919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9367442-9367560:-1:exon

position:9367442:-1
position: 9367442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9367560:-1
position: 9367560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9363786-9365404:-1:exon

position:9365404:-1
position: 9365404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100625207
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100625207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9374888..9552316
location: region:9374888-9552316:1
so has part: feature:9374888-9552316:1:exon
subclass of: SO_0000010

100625207
type: Gene
SIO_000068: ncbigene

position:9374888:1
position: 9374888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9552316:1
position: 9552316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9374888-9552316:1:exon

LOC100625207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100625207
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 37 long SRA reads, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_021080952.1
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
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SIO_000300: 21
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SIO_000300: 29
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SIO_000300: 30
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SIO_000300: 35
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SIO_000300: 36
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 40
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SIO_000300: 41
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urn:…
SIO_000300: 42
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urn:…
SIO_000300: 43
SIO_000628: feature:9548522-9548782:1:exon

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urn:…
SIO_000300: 44
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urn:…
SIO_000300: 45
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LOC100625207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100625207
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 130 long SRA reads, 14 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_003484170.4
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
location: join(9374888..9375291,9399938..9400188,9407816..9407961,9410220..9410299,9412635..9412747,9414605..9414823,9426745..9426860,9427033..9427284,9427608..9427746,9430607..9430759,9432132..9432236,9453299..9453505,9456139..9456275,9458029..9458162,9463372..9463459,9465653..9465995,9467430..9467525,9467992..9468203,9470101..9470341,9478064..9478213,9479338..9479458,9485757..9485887,9486087..9486365,9487391..9487516,9489030..9489155,9490426..9490595,9503076..9503184,9503804..9503950,9505148..9505294,9507024..9507246,9510635..9510855,9512730..9512920,9523068..9523241,9525983..9526124,9528105..9528852,9529265..9529388,9530318..9530543,9531079..9531208,9542391..9542576,9542998..9543218,9543302..9543390,9547933..9548089,9548522..9548734,9549128..9549223,9550777..9552316)
location: region:9374888-9552316:1
so has part: feature:9374888-9375291:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:9374888-9375291:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9399938-9400188:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9407816-9407961:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9410220-9410299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9412635-9412747:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9414605-9414823:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9426745-9426860:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9427033-9427284:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9427608-9427746:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9430607-9430759:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9432132-9432236:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9453299-9453505:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9456139-9456275:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9458029-9458162:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9463372-9463459:1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:9487391-9487516:1:exon

urn:…
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SIO_000628: feature:9489030-9489155:1:exon

urn:…
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SIO_000628: feature:9490426-9490595:1:exon

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urn:…
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SIO_000628: feature:9507024-9507246:1:exon

urn:…
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SIO_000628: feature:9510635-9510855:1:exon

urn:…
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SIO_000628: feature:9512730-9512920:1:exon

urn:…
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SIO_000628: feature:9523068-9523241:1:exon

urn:…
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SIO_000628: feature:9525983-9526124:1:exon

urn:…
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SIO_000628: feature:9528105-9528852:1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:9531079-9531208:1:exon

urn:…
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SIO_000628: feature:9542391-9542576:1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:9547933-9548089:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9548522-9548734:1:exon

position:9548734:1
position: 9548734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:9549128-9549223:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:9550777-9552316:1:exon

LOC100625207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100625207
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 14 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_021080953.1
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
location: join(9375304..9375507,9399938..9400188,9407816..9407961,9410220..9410299,9412635..9412747,9414605..9414823,9426745..9426860,9427033..9427284,9427608..9427746,9430607..9430759,9432132..9432236,9453299..9453505,9456139..9456275,9458029..9458162,9463372..9463459,9465653..9465995,9467430..9467525,9467992..9468203,9470101..9470341,9478064..9478213,9479338..9479458,9485757..9485887,9486087..9486365,9487391..9487516,9489030..9489155,9490426..9490595,9503076..9503184,9503804..9503950,9505148..9505294,9507024..9507246,9510635..9510855,9512730..9512920,9523068..9523241,9525983..9526124,9528105..9528852,9529265..9529388,9530318..9530543,9531079..9531208,9542391..9542576,9542998..9543218,9543302..9543390,9547933..9548089,9548522..9548782,9549128..9549223,9550777..9550914)
location: region:9375304-9550914:1
so has part: feature:9375304-9375507:1:exon
so has part: feature:9399938-9400188:1:exon
so has part: feature:9407816-9407961:1:exon
so has part: feature:9410220-9410299:1:exon
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so has part: feature:9414605-9414823:1:exon
so has part: feature:9426745-9426860:1:exon
so has part: feature:9427033-9427284:1:exon
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so has part: feature:9523068-9523241:1:exon
so has part: feature:9525983-9526124:1:exon
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so has part: feature:9542998-9543218:1:exon
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so has part: feature:9547933-9548089:1:exon
so has part: feature:9548522-9548782:1:exon
so has part: feature:9549128-9549223:1:exon
so has part: feature:9550777-9550914:1:exon

position:9375304:1
position: 9375304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9550914:1
position: 9550914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9375304-9375507:1:exon

position:9375507:1
position: 9375507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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SIO_000628: feature:9399938-9400188:1:exon

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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:9490426-9490595:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9503076-9503184:1:exon

urn:…
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SIO_000628: feature:9503804-9503950:1:exon

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SIO_000628: feature:9505148-9505294:1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:9510635-9510855:1:exon

urn:…
SIO_000300: 32
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urn:…
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SIO_000628: feature:9523068-9523241:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:9525983-9526124:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:9528105-9528852:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9529265-9529388:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:9530318-9530543:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:9531079-9531208:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9542391-9542576:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:9542998-9543218:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:9543302-9543390:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9547933-9548089:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9548522-9548782:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:9549128-9549223:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:9550777-9550914:1:exon

LOC100625207
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100625207
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021080954.1
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
location: join(9395018..9395246,9399938..9400188,9407816..9407961,9410220..9410299,9412635..9412747,9414605..9414823,9426745..9426860,9427033..9427284,9427608..9427746,9430607..9430759,9432132..9432236,9453299..9453505,9456139..9456275,9458029..9458162,9463372..9463459,9465653..9465995,9467430..9467525,9467992..9468203,9470101..9470341,9478064..9478213,9479338..9479458,9485757..9485887,9486087..9486365,9487391..9487516,9489030..9489155,9490426..9490595,9503076..9503184,9503804..9503950,9505148..9505294,9507024..9507246,9510635..9510855,9512730..9512920,9523068..9523241,9525983..9526124,9528105..9528852,9529265..9529388,9530318..9530543,9531079..9531208,9542391..9542576,9542998..9543218,9543302..9543390,9547933..9548089,9548522..9548782,9549128..9549223,9550777..9550914)
location: region:9395018-9550914:1
so has part: feature:9395018-9395246:1:exon
so has part: feature:9399938-9400188:1:exon
so has part: feature:9407816-9407961:1:exon
so has part: feature:9410220-9410299:1:exon
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so has part: feature:9430607-9430759:1:exon
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so has part: feature:9512730-9512920:1:exon
so has part: feature:9523068-9523241:1:exon
so has part: feature:9525983-9526124:1:exon
so has part: feature:9528105-9528852:1:exon
so has part: feature:9529265-9529388:1:exon
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so has part: feature:9547933-9548089:1:exon
so has part: feature:9548522-9548782:1:exon
so has part: feature:9549128-9549223:1:exon
so has part: feature:9550777-9550914:1:exon

position:9395018:1
position: 9395018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9395018-9395246:1:exon

position:9395246:1
position: 9395246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
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urn:…
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urn:…
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SIO_000628: feature:9547933-9548089:1:exon

urn:…
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urn:…
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SIO_000628: feature:9549128-9549223:1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:9550777-9550914:1:exon

LOC100625207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100625207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
translation: MTATTRGSPVGGNDSQGQAPDGHSQPLFQNQTSSPDSSNENSPATPPDEQGQGDAPPQHEDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVQSEACQRFFRDGLTISFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESISSSAQLSEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIEIIPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNKILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQSGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRNNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLAAYMNNMRLYARDHEGYDPQTVRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVAKRRTYMMDDLELIGLDYLWRVVMQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCILDGDKDSTNCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVDDLDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLKDKSVITAKLTQVSSNMPSSPDSSSDSSTGSPGNICHRYSDGPNPEVERCLPGVIMSQHPRYISFLWQVADLGSNLNMPPLRDGARILMKLMPIDSTTVEKLRAICLDQAKLGENNLGQSIDSLFFGPSASQVLYLTEVVYALLMPAGTPLADDSSDFQYHFLKSGGLRLVYSMLTRNNFLPNTDTETRRGAYLSGLKIAKLLLTAIGYGHVRAVAEACHPVVDGADPVTPINQVTHDQAVVLQNALQSIPNPSSECMLRNISIRLAQQISDEASRYMPDICVLRAIQKIIWASGCGALELIFSPNEEITKIYEMSINASKGPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKSWQTFVINLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSDDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDNVKDTGETTGIEEPVLEGHLGVTKELLAFQTPEKKCHIGCEKGANLIKELIDDFIFPASKVYLQCLRNGELPAEQAIPVCSSPATINAGFELLVALAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNNILAVEGTGSDIDDDMFSDEKQESESNVDPRDDVFGYTHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAVLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVPGVAKLEGDNVNPESQLLQQNEQSEIETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGRDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQDDEMIRYISDLTITKPHQIMSPTIERSVRKKNVQFMHNR…
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
location: join(9400096..9400188,9407816..9407961,9410220..9410299,9412635..9412747,9414605..9414823,9426745..9426860,9427033..9427284,9427608..9427746,9430607..9430759,9432132..9432236,9453299..9453505,9456139..9456275,9458029..9458162,9463372..9463459,9465653..9465995,9467430..9467525,9467992..9468203,9470101..9470341,9478064..9478213,9479338..9479458,9485757..9485887,9486087..9486365,9487391..9487516,9489030..9489155,9490426..9490595,9503076..9503184,9503804..9503950,9505148..9505294,9507024..9507246,9510635..9510855,9512730..9512920,9523068..9523241,9525983..9526124,9528105..9528852,9529265..9529388,9530318..9530543,9531079..9531208,9542391..9542576,9542998..9543218,9543302..9543390,9547933..9548089,9548522..9548782,9549128..9549223,9550777..9550914)
location: region:9400096-9550914:1
so has part: feature:9400096-9400188:1:exon
so has part: feature:9407816-9407961:1:exon
so has part: feature:9410220-9410299:1:exon
so has part: feature:9412635-9412747:1:exon
so has part: feature:9414605-9414823:1:exon
so has part: feature:9426745-9426860:1:exon
so has part: feature:9427033-9427284:1:exon
so has part: feature:9427608-9427746:1:exon
so has part: feature:9430607-9430759:1:exon
so has part: feature:9432132-9432236:1:exon
so has part: feature:9453299-9453505:1:exon
so has part: feature:9456139-9456275:1:exon
so has part: feature:9458029-9458162:1:exon
so has part: feature:9463372-9463459:1:exon
so has part: feature:9465653-9465995:1:exon
so has part: feature:9467430-9467525:1:exon
so has part: feature:9467992-9468203:1:exon
so has part: feature:9470101-9470341:1:exon
so has part: feature:9478064-9478213:1:exon
so has part: feature:9479338-9479458:1:exon
so has part: feature:9485757-9485887:1:exon
so has part: feature:9486087-9486365:1:exon
so has part: feature:9487391-9487516:1:exon
so has part: feature:9489030-9489155:1:exon
so has part: feature:9490426-9490595:1:exon
so has part: feature:9503076-9503184:1:exon
so has part: feature:9503804-9503950:1:exon
so has part: feature:9505148-9505294:1:exon
so has part: feature:9507024-9507246:1:exon
so has part: feature:9510635-9510855:1:exon
so has part: feature:9512730-9512920:1:exon
so has part: feature:9523068-9523241:1:exon
so has part: feature:9525983-9526124:1:exon
so has part: feature:9528105-9528852:1:exon
so has part: feature:9529265-9529388:1:exon
so has part: feature:9530318-9530543:1:exon
so has part: feature:9531079-9531208:1:exon
so has part: feature:9542391-9542576:1:exon
so has part: feature:9542998-9543218:1:exon
so has part: feature:9543302-9543390:1:exon
so has part: feature:9547933-9548089:1:exon
so has part: feature:9548522-9548782:1:exon
so has part: feature:9549128-9549223:1:exon
so has part: feature:9550777-9550914:1:exon

XP_020936611.1
type: Protein
SIO_000068: ncbiprotein

position:9400096:1
position: 9400096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9400096-9400188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407816-9407961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9410220-9410299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9412635-9412747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9414605-9414823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9426745-9426860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9427033-9427284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9427608-9427746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9430607-9430759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9432132-9432236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9453299-9453505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9456139-9456275:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9458029-9458162:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9463372-9463459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9465653-9465995:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9467430-9467525:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9467992-9468203:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9470101-9470341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9478064-9478213:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9479338-9479458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9485757-9485887:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9486087-9486365:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9487391-9487516:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9489030-9489155:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9490426-9490595:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9503076-9503184:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9503804-9503950:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9505148-9505294:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9507024-9507246:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:9510635-9510855:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:9512730-9512920:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:9523068-9523241:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:9525983-9526124:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:9528105-9528852:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:9529265-9529388:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9530318-9530543:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:9531079-9531208:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:9542391-9542576:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9542998-9543218:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:9543302-9543390:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:9547933-9548089:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9548522-9548782:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9549128-9549223:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:9550777-9550914:1:exon

LOC100625207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100625207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
translation: MTATTRGSPVGGNDSQGQAPDGHSQPLFQNQTSSPDSSNENSPATPPDEQGQGDAPPQHEDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVQSEACQRFFRDGLTISFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESISSSAQLSEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIEIIPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNKILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQSGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRNNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLAAYMNNMRLYARDHEGYDPQTVRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVAKRRTYMMDDLELIGLDYLWRVVMQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCILDGDKDSTNCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVDDLDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLKDKSVITAKLTQVSSNMPSSPDSSSDSSTGSPGNICHRYSDGPNPEVERCLPGVIMSQHPRYISFLWQVADLGSNLNMPPLRDGARILMKLMPIDSTTVEKLRAICLDQAKLGENNLGQSIDSLFFGPSASQVLYLTEVVYALLMPAGTPLADDSSDFQYHFLKSGGLRLVYSMLTRNNFLPNTDTETRRGAYLSGLKIAKLLLTAIGYGHVRAVAEACHPVVDGADPVTPINQVTHDQAVVLQNALQSIPNPSSECMLRNISIRLAQQISDEASRYMPDICVLRAIQKIIWASGCGALELIFSPNEEITKIYEMSINASKGPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKSWQTFVINLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSDDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDNVKDTGETTGIEEPVLEGHLGVTKELLAFQTPEKKCHIGCEKGANLIKELIDDFIFPASKVYLQCLRNGELPAEQAIPVCSSPATINAGFELLVALAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNNILAVEGTGSDIDDDMFSDEKQESESNVDPRDDVFGYTHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAVLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVPGVAKLEGDNVNPESQLLQQNEQSEIETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGRDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQDDEMIRYISDLTITKPHQIMSPTIERSVRKKNVQFMHNR…
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
location: join(9400096..9400188,9407816..9407961,9410220..9410299,9412635..9412747,9414605..9414823,9426745..9426860,9427033..9427284,9427608..9427746,9430607..9430759,9432132..9432236,9453299..9453505,9456139..9456275,9458029..9458162,9463372..9463459,9465653..9465995,9467430..9467525,9467992..9468203,9470101..9470341,9478064..9478213,9479338..9479458,9485757..9485887,9486087..9486365,9487391..9487516,9489030..9489155,9490426..9490595,9503076..9503184,9503804..9503950,9505148..9505294,9507024..9507246,9510635..9510855,9512730..9512920,9523068..9523241,9525983..9526124,9528105..9528852,9529265..9529388,9530318..9530543,9531079..9531208,9542391..9542576,9542998..9543218,9543302..9543390,9547933..9548089,9548522..9548782,9549128..9549223,9550777..9550914)
location: region:9400096-9550914:1
so has part: feature:9400096-9400188:1:exon
so has part: feature:9407816-9407961:1:exon
so has part: feature:9410220-9410299:1:exon
so has part: feature:9412635-9412747:1:exon
so has part: feature:9414605-9414823:1:exon
so has part: feature:9426745-9426860:1:exon
so has part: feature:9427033-9427284:1:exon
so has part: feature:9427608-9427746:1:exon
so has part: feature:9430607-9430759:1:exon
so has part: feature:9432132-9432236:1:exon
so has part: feature:9453299-9453505:1:exon
so has part: feature:9456139-9456275:1:exon
so has part: feature:9458029-9458162:1:exon
so has part: feature:9463372-9463459:1:exon
so has part: feature:9465653-9465995:1:exon
so has part: feature:9467430-9467525:1:exon
so has part: feature:9467992-9468203:1:exon
so has part: feature:9470101-9470341:1:exon
so has part: feature:9478064-9478213:1:exon
so has part: feature:9479338-9479458:1:exon
so has part: feature:9485757-9485887:1:exon
so has part: feature:9486087-9486365:1:exon
so has part: feature:9487391-9487516:1:exon
so has part: feature:9489030-9489155:1:exon
so has part: feature:9490426-9490595:1:exon
so has part: feature:9503076-9503184:1:exon
so has part: feature:9503804-9503950:1:exon
so has part: feature:9505148-9505294:1:exon
so has part: feature:9507024-9507246:1:exon
so has part: feature:9510635-9510855:1:exon
so has part: feature:9512730-9512920:1:exon
so has part: feature:9523068-9523241:1:exon
so has part: feature:9525983-9526124:1:exon
so has part: feature:9528105-9528852:1:exon
so has part: feature:9529265-9529388:1:exon
so has part: feature:9530318-9530543:1:exon
so has part: feature:9531079-9531208:1:exon
so has part: feature:9542391-9542576:1:exon
so has part: feature:9542998-9543218:1:exon
so has part: feature:9543302-9543390:1:exon
so has part: feature:9547933-9548089:1:exon
so has part: feature:9548522-9548782:1:exon
so has part: feature:9549128-9549223:1:exon
so has part: feature:9550777-9550914:1:exon

XP_020936612.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9400096-9400188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407816-9407961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9410220-9410299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9412635-9412747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9414605-9414823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9426745-9426860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9427033-9427284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9427608-9427746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9430607-9430759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9432132-9432236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9453299-9453505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9456139-9456275:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9458029-9458162:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9463372-9463459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9465653-9465995:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9467430-9467525:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9467992-9468203:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9470101-9470341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9478064-9478213:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9479338-9479458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9485757-9485887:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9486087-9486365:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9487391-9487516:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9489030-9489155:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9490426-9490595:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9503076-9503184:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9503804-9503950:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9505148-9505294:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9507024-9507246:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:9510635-9510855:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:9512730-9512920:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:9523068-9523241:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:9525983-9526124:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:9528105-9528852:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:9529265-9529388:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9530318-9530543:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:9531079-9531208:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:9542391-9542576:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9542998-9543218:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:9543302-9543390:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:9547933-9548089:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9548522-9548782:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9549128-9549223:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:9550777-9550914:1:exon

LOC100625207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100625207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
translation: MTATTRGSPVGGNDSQGQAPDGHSQPLFQNQTSSPDSSNENSPATPPDEQGQGDAPPQHEDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVQSEACQRFFRDGLTISFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESISSSAQLSEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIEIIPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNKILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQSGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRNNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLAAYMNNMRLYARDHEGYDPQTVRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVAKRRTYMMDDLELIGLDYLWRVVMQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCILDGDKDSTNCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVDDLDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLKDKSVITAKLTQVSSNMPSSPDSSSDSSTGSPGNICHRYSDGPNPEVERCLPGVIMSQHPRYISFLWQVADLGSNLNMPPLRDGARILMKLMPIDSTTVEKLRAICLDQAKLGENNLGQSIDSLFFGPSASQVLYLTEVVYALLMPAGTPLADDSSDFQYHFLKSGGLRLVYSMLTRNNFLPNTDTETRRGAYLSGLKIAKLLLTAIGYGHVRAVAEACHPVVDGADPVTPINQVTHDQAVVLQNALQSIPNPSSECMLRNISIRLAQQISDEASRYMPDICVLRAIQKIIWASGCGALELIFSPNEEITKIYEMSINASKGPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKSWQTFVINLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSDDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDNVKDTGETTGIEEPVLEGHLGVTKELLAFQTPEKKCHIGCEKGANLIKELIDDFIFPASKVYLQCLRNGELPAEQAIPVCSSPATINAGFELLVALAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNNILAVEGTGSDIDDDMFSDEKQESESNVDPRDDVFGYTHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAVLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVPGVAKLEGDNVNPESQLLQQNEQSEIETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGRDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQDDEMIRYISDLTITKPHQIMSPTIERSVRKKNVQFMHNR…
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
location: join(9400096..9400188,9407816..9407961,9410220..9410299,9412635..9412747,9414605..9414823,9426745..9426860,9427033..9427284,9427608..9427746,9430607..9430759,9432132..9432236,9453299..9453505,9456139..9456275,9458029..9458162,9463372..9463459,9465653..9465995,9467430..9467525,9467992..9468203,9470101..9470341,9478064..9478213,9479338..9479458,9485757..9485887,9486087..9486365,9487391..9487516,9489030..9489155,9490426..9490595,9503076..9503184,9503804..9503950,9505148..9505294,9507024..9507246,9510635..9510855,9512730..9512920,9523068..9523241,9525983..9526124,9528105..9528852,9529265..9529388,9530318..9530543,9531079..9531208,9542391..9542576,9542998..9543218,9543302..9543390,9547933..9548089,9548522..9548782,9549128..9549223,9550777..9550914)
location: region:9400096-9550914:1
so has part: feature:9400096-9400188:1:exon
so has part: feature:9407816-9407961:1:exon
so has part: feature:9410220-9410299:1:exon
so has part: feature:9412635-9412747:1:exon
so has part: feature:9414605-9414823:1:exon
so has part: feature:9426745-9426860:1:exon
so has part: feature:9427033-9427284:1:exon
so has part: feature:9427608-9427746:1:exon
so has part: feature:9430607-9430759:1:exon
so has part: feature:9432132-9432236:1:exon
so has part: feature:9453299-9453505:1:exon
so has part: feature:9456139-9456275:1:exon
so has part: feature:9458029-9458162:1:exon
so has part: feature:9463372-9463459:1:exon
so has part: feature:9465653-9465995:1:exon
so has part: feature:9467430-9467525:1:exon
so has part: feature:9467992-9468203:1:exon
so has part: feature:9470101-9470341:1:exon
so has part: feature:9478064-9478213:1:exon
so has part: feature:9479338-9479458:1:exon
so has part: feature:9485757-9485887:1:exon
so has part: feature:9486087-9486365:1:exon
so has part: feature:9487391-9487516:1:exon
so has part: feature:9489030-9489155:1:exon
so has part: feature:9490426-9490595:1:exon
so has part: feature:9503076-9503184:1:exon
so has part: feature:9503804-9503950:1:exon
so has part: feature:9505148-9505294:1:exon
so has part: feature:9507024-9507246:1:exon
so has part: feature:9510635-9510855:1:exon
so has part: feature:9512730-9512920:1:exon
so has part: feature:9523068-9523241:1:exon
so has part: feature:9525983-9526124:1:exon
so has part: feature:9528105-9528852:1:exon
so has part: feature:9529265-9529388:1:exon
so has part: feature:9530318-9530543:1:exon
so has part: feature:9531079-9531208:1:exon
so has part: feature:9542391-9542576:1:exon
so has part: feature:9542998-9543218:1:exon
so has part: feature:9543302-9543390:1:exon
so has part: feature:9547933-9548089:1:exon
so has part: feature:9548522-9548782:1:exon
so has part: feature:9549128-9549223:1:exon
so has part: feature:9550777-9550914:1:exon

XP_020936613.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9400096-9400188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407816-9407961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9410220-9410299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9412635-9412747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9414605-9414823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9426745-9426860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9427033-9427284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9427608-9427746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9430607-9430759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9432132-9432236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9453299-9453505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9456139-9456275:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9458029-9458162:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9463372-9463459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9465653-9465995:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9467430-9467525:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9467992-9468203:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9470101-9470341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9478064-9478213:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9479338-9479458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9485757-9485887:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9486087-9486365:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9487391-9487516:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9489030-9489155:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9490426-9490595:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9503076-9503184:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9503804-9503950:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9505148-9505294:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9507024-9507246:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:9510635-9510855:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:9512730-9512920:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:9523068-9523241:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:9525983-9526124:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:9528105-9528852:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:9529265-9529388:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9530318-9530543:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:9531079-9531208:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:9542391-9542576:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9542998-9543218:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:9543302-9543390:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:9547933-9548089:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9548522-9548782:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9549128-9549223:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:9550777-9550914:1:exon

LOC100625207
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100625207
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X2
translation: MTATTRGSPVGGNDSQGQAPDGHSQPLFQNQTSSPDSSNENSPATPPDEQGQGDAPPQHEDEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVQSEACQRFFRDGLTISFTKILMDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMALNPHCKFHIYNGTRPCESISSSAQLSEDELFARSSDPRSPKGWLVDLINKFGTLNGFQILHDRFINGSALNVQIIAALIKPFGQCYEFLSQHTVKKYFIPIIEIIPQFLENLTDEELKKEAKNETKNDALSMIIKSLKNLASRIPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEINKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNKILSIVLRDSLHQPQYVEKLEKILRFVIKEKALTLEDLDNIWAAQSGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDLALSAHIKILDYSCSQDRDTQKIQWIDRFIEELRNNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLAAYMNNMRLYARDHEGYDPQTVRLGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWYSKLMGDEPDLDPDINKDFFESNVLQLDPFLLTENGMKCFERFFKAVNCREGKLVAKRRTYMMDDLELIGLDYLWRVVMQSNDDIASRAIDLLKEIYTNLGPRLQVNQVVIHEDFIQSCFDRLKASYDTLCILDGDKDSTNCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHLSLIVRFPNHGRQVDDLDIWSHTNDTVGSVRRCILNRIKANVAHTKIELFVGGELIDSEDDRKLIGQLNLKDKSVITAKLTQVSSNMPSSPDSSSDSSTGSPGNICHRYSDGPNPEVERCLPGVIMSQHPRYISFLWQVADLGSNLNMPPLRDGARILMKLMPIDSTTVEKLRAICLDQAKLGENNLGQSIDSLFFGPSASQVLYLTEVVYALLMPAGTPLADDSSDFQYHFLKSGGLRLVYSMLTRNNFLPNTDTETRRGAYLSGLKIAKLLLTAIGYGHVRAVAEACHPVVDGADPVTPINQVTHDQAVVLQNALQSIPNPSSECMLRNISIRLAQQISDEASRYMPDICVLRAIQKIIWASGCGALELIFSPNEEITKIYEMSINASKGPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKSWQTFVINLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSDDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDNVKDTGETTGIEEPVLEGHLGVTKELLAFQTPEKKCHIGCEKGANLIKELIDDFIFPASKVYLQCLRNGELPAEQAIPVCSSPATINAGFELLVALAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNNILAVEGTGSDIDDDMFSDEKQESESNVDPRDDVFGYTHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAVLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVPGVAKLEGDNVNPESQLLQQNEQSEIETAGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGRDGERNRWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERLDTIDQDDEMIRYISDLTITKPHQIMSPTIERSVRKKNVQFMHNR…
SIO_010081: LOC100625207
subclass of: SO_0000673
so part of: LOC100625207
location: join(9400096..9400188,9407816..9407961,9410220..9410299,9412635..9412747,9414605..9414823,9426745..9426860,9427033..9427284,9427608..9427746,9430607..9430759,9432132..9432236,9453299..9453505,9456139..9456275,9458029..9458162,9463372..9463459,9465653..9465995,9467430..9467525,9467992..9468203,9470101..9470341,9478064..9478213,9479338..9479458,9485757..9485887,9486087..9486365,9487391..9487516,9489030..9489155,9490426..9490595,9503076..9503184,9503804..9503950,9505148..9505294,9507024..9507246,9510635..9510855,9512730..9512920,9523068..9523241,9525983..9526124,9528105..9528852,9529265..9529388,9530318..9530543,9531079..9531208,9542391..9542576,9542998..9543218,9543302..9543390,9547933..9548089,9548522..9548734,9549128..9549223,9550777..9550914)
location: region:9400096-9550914:1
so has part: feature:9400096-9400188:1:exon
so has part: feature:9407816-9407961:1:exon
so has part: feature:9410220-9410299:1:exon
so has part: feature:9412635-9412747:1:exon
so has part: feature:9414605-9414823:1:exon
so has part: feature:9426745-9426860:1:exon
so has part: feature:9427033-9427284:1:exon
so has part: feature:9427608-9427746:1:exon
so has part: feature:9430607-9430759:1:exon
so has part: feature:9432132-9432236:1:exon
so has part: feature:9453299-9453505:1:exon
so has part: feature:9456139-9456275:1:exon
so has part: feature:9458029-9458162:1:exon
so has part: feature:9463372-9463459:1:exon
so has part: feature:9465653-9465995:1:exon
so has part: feature:9467430-9467525:1:exon
so has part: feature:9467992-9468203:1:exon
so has part: feature:9470101-9470341:1:exon
so has part: feature:9478064-9478213:1:exon
so has part: feature:9479338-9479458:1:exon
so has part: feature:9485757-9485887:1:exon
so has part: feature:9486087-9486365:1:exon
so has part: feature:9487391-9487516:1:exon
so has part: feature:9489030-9489155:1:exon
so has part: feature:9490426-9490595:1:exon
so has part: feature:9503076-9503184:1:exon
so has part: feature:9503804-9503950:1:exon
so has part: feature:9505148-9505294:1:exon
so has part: feature:9507024-9507246:1:exon
so has part: feature:9510635-9510855:1:exon
so has part: feature:9512730-9512920:1:exon
so has part: feature:9523068-9523241:1:exon
so has part: feature:9525983-9526124:1:exon
so has part: feature:9528105-9528852:1:exon
so has part: feature:9529265-9529388:1:exon
so has part: feature:9530318-9530543:1:exon
so has part: feature:9531079-9531208:1:exon
so has part: feature:9542391-9542576:1:exon
so has part: feature:9542998-9543218:1:exon
so has part: feature:9543302-9543390:1:exon
so has part: feature:9547933-9548089:1:exon
so has part: feature:9548522-9548734:1:exon
so has part: feature:9549128-9549223:1:exon
so has part: feature:9550777-9550914:1:exon

XP_003484218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9400096-9400188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9407816-9407961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9410220-9410299:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9412635-9412747:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9414605-9414823:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9426745-9426860:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9427033-9427284:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9427608-9427746:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9430607-9430759:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9432132-9432236:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9453299-9453505:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9456139-9456275:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9458029-9458162:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9463372-9463459:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9465653-9465995:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9467430-9467525:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9467992-9468203:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9470101-9470341:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9478064-9478213:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:9479338-9479458:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:9485757-9485887:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:9486087-9486365:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:9487391-9487516:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9489030-9489155:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9490426-9490595:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:9503076-9503184:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:9503804-9503950:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:9505148-9505294:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:9507024-9507246:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:9510635-9510855:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:9512730-9512920:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:9523068-9523241:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:9525983-9526124:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:9528105-9528852:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:9529265-9529388:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:9530318-9530543:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:9531079-9531208:1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:9542391-9542576:1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:9542998-9543218:1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:9543302-9543390:1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:9547933-9548089:1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:9548522-9548734:1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:9549128-9549223:1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:9550777-9550914:1:exon

LOC106508252
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC106508252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9481008..9482024)
location: region:9481008-9482024:-1
so has part: feature:9481008-9482024:-1:exon

106508252
type: Gene
SIO_000068: ncbigene

position:9481008:-1
position: 9481008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9482024:-1
position: 9482024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9481008-9482024:-1:exon

LOC106508252
type: Exon
subclass of: SO_0000147
RO_0002162: 9823
gene: LOC106508252
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106508252
subclass of: SO_0000673
so part of: LOC106508252
location: complement(9481008..9482024)
location: region:9481008-9482024:-1
so has part: feature:9481008-9482024:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9481008-9482024:-1:exon

LOC102162178
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC102162178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(9565582..9614075)
location: region:9565582-9614075:-1
so has part: feature:9565582-9614075:-1:exon
subclass of: SO_0000010

102162178
type: Gene
SIO_000068: ncbigene

position:9565582:-1
position: 9565582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9614075:-1
position: 9614075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9565582-9614075:-1:exon

LOC102162178
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC102162178
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_021080895.1
SIO_010081: LOC102162178
subclass of: SO_0000673
so part of: LOC102162178
location: complement(join(9565582..9565922,9568667..9568840,9578976..9579166,9581041..9581261,9584641..9584863,9586593..9586739,9587926..9588072,9588692..9588800,9601286..9601455,9602726..9602851,9604367..9604492,9605518..9605796,9605996..9606126,9612437..9612557,9613682..9614075))
location: region:9565582-9614075:-1
so has part: feature:9613682-9614075:-1:exon
so has part: feature:9612437-9612557:-1:exon
so has part: feature:9605996-9606126:-1:exon
so has part: feature:9605518-9605796:-1:exon
so has part: feature:9604367-9604492:-1:exon
so has part: feature:9602726-9602851:-1:exon
so has part: feature:9601286-9601455:-1:exon
so has part: feature:9588692-9588800:-1:exon
so has part: feature:9587926-9588072:-1:exon
so has part: feature:9586593-9586739:-1:exon
so has part: feature:9584641-9584863:-1:exon
so has part: feature:9581041-9581261:-1:exon
so has part: feature:9578976-9579166:-1:exon
so has part: feature:9568667-9568840:-1:exon
so has part: feature:9565582-9565922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9613682-9614075:-1:exon

position:9613682:-1
position: 9613682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9612437-9612557:-1:exon

position:9612437:-1
position: 9612437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9612557:-1
position: 9612557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9605996-9606126:-1:exon

position:9605996:-1
position: 9605996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9606126:-1
position: 9606126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9605518-9605796:-1:exon

position:9605518:-1
position: 9605518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9605796:-1
position: 9605796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9604367-9604492:-1:exon

position:9604367:-1
position: 9604367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9604492:-1
position: 9604492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9602726-9602851:-1:exon

position:9602726:-1
position: 9602726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9602851:-1
position: 9602851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9601286-9601455:-1:exon

position:9601286:-1
position: 9601286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9601455:-1
position: 9601455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9588692-9588800:-1:exon

position:9588692:-1
position: 9588692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9588800:-1
position: 9588800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9587926-9588072:-1:exon

position:9587926:-1
position: 9587926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9588072:-1
position: 9588072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9586593-9586739:-1:exon

position:9586593:-1
position: 9586593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9586739:-1
position: 9586739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9584641-9584863:-1:exon

position:9584641:-1
position: 9584641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9584863:-1
position: 9584863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9581041-9581261:-1:exon

position:9581041:-1
position: 9581041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9581261:-1
position: 9581261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9578976-9579166:-1:exon

position:9578976:-1
position: 9578976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9579166:-1
position: 9579166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9568667-9568840:-1:exon

position:9568667:-1
position: 9568667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9568840:-1
position: 9568840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9565582-9565922:-1:exon

position:9565922:-1
position: 9565922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102162178
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC102162178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ubiquitin carboxyl-terminal hydrolase FAF-X
translation: MPSSPDSSSDSSTGSPGNICHRYSDGPNPEVERCLPGVIMSQHPRYISFLWQVADLGSNLNMPPLRDGARILMKLMPIDSTTVEKLRAICLDQAKLGENNLGQSIDSLFFGPSASQVLYLTEVVYALLMPAGTPLADDSSDFQYHFLKSGGLRLVYSMLTRNNFLPNTDTETRRGAYLSGLKIAKLLLTAIGYGHVRAVAEACHPVVDGADPVTPINQVTHDQAVVLQNALQSIPNPSSECMLRNISIRLAQQISDEASRYMPDICVLRAIQKIIWASGCGALELIFSPNEEITKIYEMSINASKGPDMEDEQVCCEALEVMTLCFALIPTALDALSKEKSWQTFVINLLLHCPSKTVRQLAQEQFFLMCTRCCMGHRPLLFFITLLFTILGSTARERGKHSDDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDNVKDTGETTGIEEPVLEGHLGVTKELLAFQTPEKKCHIGCEKGANLIKELIDDFIFPASKVYLQCLRNGELPAEQAIPVCSSPATINAGFELLVALAVGCVRNLKQIVDCLTEMYYMGTAITTCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPSIRNNILAVEGTGSDIDDDMFSDEKQESESNVDPRDDVFGYTHQFEDKPALSKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAVLSQVLGGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYIKGDLLEGANAYRCEKCDKKVCIVC
SIO_010081: LOC102162178
subclass of: SO_0000673
so part of: LOC102162178
location: complement(join(9565763..9565922,9568667..9568840,9578976..9579166,9581041..9581261,9584641..9584863,9586593..9586739,9587926..9588072,9588692..9588800,9601286..9601455,9602726..9602851,9604367..9604492,9605518..9605796,9605996..9606126,9612437..9612557,9613682..9613795))
location: region:9565763-9613795:-1
so has part: feature:9613682-9613795:-1:exon
so has part: feature:9612437-9612557:-1:exon
so has part: feature:9605996-9606126:-1:exon
so has part: feature:9605518-9605796:-1:exon
so has part: feature:9604367-9604492:-1:exon
so has part: feature:9602726-9602851:-1:exon
so has part: feature:9601286-9601455:-1:exon
so has part: feature:9588692-9588800:-1:exon
so has part: feature:9587926-9588072:-1:exon
so has part: feature:9586593-9586739:-1:exon
so has part: feature:9584641-9584863:-1:exon
so has part: feature:9581041-9581261:-1:exon
so has part: feature:9578976-9579166:-1:exon
so has part: feature:9568667-9568840:-1:exon
so has part: feature:9565763-9565922:-1:exon

XP_020936554.1
type: Protein
SIO_000068: ncbiprotein

position:9565763:-1
position: 9565763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9613795:-1
position: 9613795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9613682-9613795:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9612437-9612557:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9605996-9606126:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9605518-9605796:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9604367-9604492:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9602726-9602851:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9601286-9601455:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9588692-9588800:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9587926-9588072:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9586593-9586739:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9584641-9584863:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9581041-9581261:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9578976-9579166:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9568667-9568840:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9565763-9565922:-1:exon

LOC106508251
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC106508251
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9609871..9610885
location: region:9609871-9610885:1
so has part: feature:9609871-9610885:1:exon

106508251
type: Gene
SIO_000068: ncbigene

position:9609871:1
position: 9609871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9610885:1
position: 9610885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9609871-9610885:1:exon

LOC106508251
type: Exon
subclass of: SO_0000147
RO_0002162: 9823
gene: LOC106508251
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC106508251
subclass of: SO_0000673
so part of: LOC106508251
location: 9609871..9610885
location: region:9609871-9610885:1
so has part: feature:9609871-9610885:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9609871-9610885:1:exon

EIF1AY
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: EIF1AY
note: eukaryotic translation initiation factor 1A, Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(9687350..9704489)
location: region:9687350-9704489:-1
so has part: feature:9687350-9704489:-1:exon
subclass of: SO_0000010

100625415
type: Gene
SIO_000068: ncbigene

position:9687350:-1
position: 9687350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9704489:-1
position: 9704489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9687350-9704489:-1:exon

EIF1AY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: EIF1AY
product: eukaryotic translation initiation factor 1A, Y-linked, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 ESTs, 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_013991067.2
SIO_010081: EIF1AY
subclass of: SO_0000673
so part of: EIF1AY
location: complement(join(9687350..9688357,9692872..9692963,9698003..9698053,9698954..9699057,9702602..9702685,9704276..9704489))
location: region:9687350-9704489:-1
so has part: feature:9704276-9704489:-1:exon
so has part: feature:9702602-9702685:-1:exon
so has part: feature:9698954-9699057:-1:exon
so has part: feature:9698003-9698053:-1:exon
so has part: feature:9692872-9692963:-1:exon
so has part: feature:9687350-9688357:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9704276-9704489:-1:exon

position:9704276:-1
position: 9704276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9702602-9702685:-1:exon

position:9702602:-1
position: 9702602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9702685:-1
position: 9702685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9698954-9699057:-1:exon

position:9698954:-1
position: 9698954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9699057:-1
position: 9699057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9698003-9698053:-1:exon

position:9698003:-1
position: 9698003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9698053:-1
position: 9698053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9692872-9692963:-1:exon

position:9692872:-1
position: 9692872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9692963:-1
position: 9692963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9687350-9688357:-1:exon

position:9688357:-1
position: 9688357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EIF1AY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: EIF1AY
product: eukaryotic translation initiation factor 1A, Y-linked
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001244349.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001244349.1
SIO_010081: EIF1AY
subclass of: SO_0000673
so part of: EIF1AY
location: complement(join(9687854..9688357,9692872..9692963,9694284..9694365,9698003..9698053,9698954..9699057,9702602..9702685,9704276..9704413))
location: region:9687854-9704413:-1
so has part: feature:9704276-9704413:-1:exon
so has part: feature:9702602-9702685:-1:exon
so has part: feature:9698954-9699057:-1:exon
so has part: feature:9698003-9698053:-1:exon
so has part: feature:9694284-9694365:-1:exon
so has part: feature:9692872-9692963:-1:exon
so has part: feature:9687854-9688357:-1:exon

position:9687854:-1
position: 9687854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9704413:-1
position: 9704413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9704276-9704413:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9702602-9702685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9698954-9699057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9698003-9698053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9694284-9694365:-1:exon

position:9694284:-1
position: 9694284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9694365:-1
position: 9694365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9692872-9692963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9687854-9688357:-1:exon

EIF1AY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: EIF1AY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 1A, Y-linked isoform X1
translation: MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQQRLMKLIHLVLEMMMKSSLMTLEMMMKTLMISKLVLQEFLRIILQFEFRSSPVKIKTSFKMNVVLRHTDLF
SIO_010081: EIF1AY
subclass of: SO_0000673
so part of: EIF1AY
location: complement(join(9688234..9688357,9692872..9692963,9698003..9698053,9698954..9699057,9702602..9702685,9704276..9704291))
location: region:9688234-9704291:-1
so has part: feature:9704276-9704291:-1:exon
so has part: feature:9702602-9702685:-1:exon
so has part: feature:9698954-9699057:-1:exon
so has part: feature:9698003-9698053:-1:exon
so has part: feature:9692872-9692963:-1:exon
so has part: feature:9688234-9688357:-1:exon

XP_013846521.2
type: Protein
SIO_000068: ncbiprotein

position:9688234:-1
position: 9688234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9704291:-1
position: 9704291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9704276-9704291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9702602-9702685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9698954-9699057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9698003-9698053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9692872-9692963:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9688234-9688357:-1:exon

EIF1AY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: EIF1AY
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: eukaryotic translation initiation factor 1A, Y-linked
translation: MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDIDDI
SIO_010081: EIF1AY
subclass of: SO_0000673
so part of: EIF1AY
location: complement(join(9688352..9688357,9692872..9692963,9694284..9694365,9698003..9698053,9698954..9699057,9702602..9702685,9704276..9704291))
location: region:9688352-9704291:-1
so has part: feature:9704276-9704291:-1:exon
so has part: feature:9702602-9702685:-1:exon
so has part: feature:9698954-9699057:-1:exon
so has part: feature:9698003-9698053:-1:exon
so has part: feature:9694284-9694365:-1:exon
so has part: feature:9692872-9692963:-1:exon
so has part: feature:9688352-9688357:-1:exon

NP_001231278.1
type: Protein
SIO_000068: ncbiprotein

position:9688352:-1
position: 9688352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9704276-9704291:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9702602-9702685:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9698954-9699057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9698003-9698053:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9694284-9694365:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9692872-9692963:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9688352-9688357:-1:exon

LOC110257944
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257944
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(9778885..9781424)
location: region:9778885-9781424:-1
so has part: feature:9778885-9781424:-1:exon

110257944
type: Gene
SIO_000068: ncbigene

position:9778885:-1
position: 9778885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9781424:-1
position: 9781424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9778885-9781424:-1:exon

LOC110257944
type: Exon
subclass of: SO_0000147
RO_0002162: 9823
gene: LOC110257944
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110257944
subclass of: SO_0000673
so part of: LOC110257944
location: complement(9778885..9780102)
location: region:9778885-9780102:-1
so has part: feature:9778885-9780102:-1:exon

position:9780102:-1
position: 9780102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9778885-9780102:-1:exon

LOC110257944
type: Exon
subclass of: SO_0000147
RO_0002162: 9823
gene: LOC110257944
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC110257944
subclass of: SO_0000673
so part of: LOC110257944
location: complement(9781340..9781424)
location: region:9781340-9781424:-1
so has part: feature:9781340-9781424:-1:exon

position:9781340:-1
position: 9781340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9781340-9781424:-1:exon

LOC100624149
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100624149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9827511..9847793
location: region:9827511-9847793:1
so has part: feature:9827511-9847793:1:exon
subclass of: SO_0000010

100624149
type: Gene
SIO_000068: ncbigene

position:9827511:1
position: 9827511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9847793:1
position: 9847793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9827511-9847793:1:exon

LOC100624149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624149
product: eukaryotic translation initiation factor 2 subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 82 ESTs, 209 long SRA reads, 18 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_005657947.3
SIO_010081: LOC100624149
subclass of: SO_0000673
so part of: LOC100624149
location: join(9827511..9827534,9827624..9827796,9828741..9828804,9829693..9829820,9829913..9830034,9833673..9833767,9835186..9835344,9836506..9836640,9837694..9837788,9838030..9838174,9839695..9839864,9842112..9842284,9847363..9847790)
location: region:9827511-9847790:1
so has part: feature:9827511-9827534:1:exon
so has part: feature:9827624-9827796:1:exon
so has part: feature:9828741-9828804:1:exon
so has part: feature:9829693-9829820:1:exon
so has part: feature:9829913-9830034:1:exon
so has part: feature:9833673-9833767:1:exon
so has part: feature:9835186-9835344:1:exon
so has part: feature:9836506-9836640:1:exon
so has part: feature:9837694-9837788:1:exon
so has part: feature:9838030-9838174:1:exon
so has part: feature:9839695-9839864:1:exon
so has part: feature:9842112-9842284:1:exon
so has part: feature:9847363-9847790:1:exon

position:9847790:1
position: 9847790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9827511-9827534:1:exon

position:9827534:1
position: 9827534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9827624-9827796:1:exon

position:9827624:1
position: 9827624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9827796:1
position: 9827796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9828741-9828804:1:exon

position:9828741:1
position: 9828741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9828804:1
position: 9828804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9829693-9829820:1:exon

position:9829693:1
position: 9829693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9829820:1
position: 9829820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9829913-9830034:1:exon

position:9829913:1
position: 9829913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9830034:1
position: 9830034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9833673-9833767:1:exon

position:9833673:1
position: 9833673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9833767:1
position: 9833767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:9835186-9835344:1:exon

position:9835186:1
position: 9835186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9835344:1
position: 9835344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9836506-9836640:1:exon

position:9836506:1
position: 9836506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9836640:1
position: 9836640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9837694-9837788:1:exon

position:9837694:1
position: 9837694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9837788:1
position: 9837788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9838030-9838174:1:exon

position:9838030:1
position: 9838030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9838174:1
position: 9838174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9839695-9839864:1:exon

position:9839695:1
position: 9839695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9839864:1
position: 9839864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9842112-9842284:1:exon

position:9842112:1
position: 9842112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9842284:1
position: 9842284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9847363-9847790:1:exon

position:9847363:1
position: 9847363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100624149
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624149
product: eukaryotic translation initiation factor 2 subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80 ESTs, 41 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_021080929.1
SIO_010081: LOC100624149
subclass of: SO_0000673
so part of: LOC100624149
location: join(9827647..9827796,9828741..9828804,9829693..9829820,9829913..9830034,9833673..9833767,9835186..9835344,9836506..9836640,9837694..9837827,9838030..9838174,9839695..9839864,9842112..9842284,9847363..9847793)
location: region:9827647-9847793:1
so has part: feature:9827647-9827796:1:exon
so has part: feature:9828741-9828804:1:exon
so has part: feature:9829693-9829820:1:exon
so has part: feature:9829913-9830034:1:exon
so has part: feature:9833673-9833767:1:exon
so has part: feature:9835186-9835344:1:exon
so has part: feature:9836506-9836640:1:exon
so has part: feature:9837694-9837827:1:exon
so has part: feature:9838030-9838174:1:exon
so has part: feature:9839695-9839864:1:exon
so has part: feature:9842112-9842284:1:exon
so has part: feature:9847363-9847793:1:exon

position:9827647:1
position: 9827647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9827647-9827796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9828741-9828804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9829693-9829820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9829913-9830034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9833673-9833767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9835186-9835344:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9836506-9836640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9837694-9837827:1:exon

position:9837827:1
position: 9837827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9838030-9838174:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9839695-9839864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9842112-9842284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9847363-9847793:1:exon

LOC100624149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 3 isoform X1
translation: MAAGEAGVTLGQPHLSRQDLTTLDVTRLTPLSHEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDASCPRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVNLILTLLNQKSMVGQEIEVRPGIVSKDCEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTVDDD
SIO_010081: LOC100624149
subclass of: SO_0000673
so part of: LOC100624149
location: join(9827728..9827796,9828741..9828804,9829693..9829820,9829913..9830034,9833673..9833767,9835186..9835344,9836506..9836640,9837694..9837827,9838030..9838174,9839695..9839864,9842112..9842284,9847363..9847426)
location: region:9827728-9847426:1
so has part: feature:9827728-9827796:1:exon
so has part: feature:9828741-9828804:1:exon
so has part: feature:9829693-9829820:1:exon
so has part: feature:9829913-9830034:1:exon
so has part: feature:9833673-9833767:1:exon
so has part: feature:9835186-9835344:1:exon
so has part: feature:9836506-9836640:1:exon
so has part: feature:9837694-9837827:1:exon
so has part: feature:9838030-9838174:1:exon
so has part: feature:9839695-9839864:1:exon
so has part: feature:9842112-9842284:1:exon
so has part: feature:9847363-9847426:1:exon

XP_020936588.1
type: Protein
SIO_000068: ncbiprotein

position:9827728:1
position: 9827728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9847426:1
position: 9847426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9827728-9827796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9828741-9828804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9829693-9829820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9829913-9830034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9833673-9833767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9835186-9835344:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9836506-9836640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9837694-9837827:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9838030-9838174:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9839695-9839864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9842112-9842284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9847363-9847426:1:exon

LOC100624149
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624149
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: eukaryotic translation initiation factor 2 subunit 3 isoform X2
translation: MAAGEAGVTLGQPHLSRQDLTTLDVTRLTPLSHEVISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDASCPRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPLRDFTSEPRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDCEGKLMCKPIFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEISYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTVDDD
SIO_010081: LOC100624149
subclass of: SO_0000673
so part of: LOC100624149
location: join(9827728..9827796,9828741..9828804,9829693..9829820,9829913..9830034,9833673..9833767,9835186..9835344,9836506..9836640,9837694..9837788,9838030..9838174,9839695..9839864,9842112..9842284,9847363..9847426)
location: region:9827728-9847426:1
so has part: feature:9827728-9827796:1:exon
so has part: feature:9828741-9828804:1:exon
so has part: feature:9829693-9829820:1:exon
so has part: feature:9829913-9830034:1:exon
so has part: feature:9833673-9833767:1:exon
so has part: feature:9835186-9835344:1:exon
so has part: feature:9836506-9836640:1:exon
so has part: feature:9837694-9837788:1:exon
so has part: feature:9838030-9838174:1:exon
so has part: feature:9839695-9839864:1:exon
so has part: feature:9842112-9842284:1:exon
so has part: feature:9847363-9847426:1:exon

XP_005658004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9827728-9827796:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9828741-9828804:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9829693-9829820:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9829913-9830034:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9833673-9833767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9835186-9835344:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9836506-9836640:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9837694-9837788:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9838030-9838174:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9839695-9839864:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9842112-9842284:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9847363-9847426:1:exon

LOC100624329
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9874048..9935356
location: region:9874048-9935356:1
so has part: feature:9874048-9935356:1:exon
subclass of: SO_0000010

100624329
type: Gene
SIO_000068: ncbigene

position:9874048:1
position: 9874048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9935356:1
position: 9935356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9874048-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 35 long SRA reads, 144 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_013991057.2
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9874048..9874566,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9931642..9935356)
location: region:9874048-9935356:1
so has part: feature:9874048-9874566:1:exon
so has part: feature:9910950-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9931642-9935356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9874048-9874566:1:exon

position:9874566:1
position: 9874566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

position:9910950:1
position: 9910950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9911038:1
position: 9911038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

position:9916632:1
position: 9916632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9917192:1
position: 9917192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

position:9928932:1
position: 9928932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9929081:1
position: 9929081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:9929400-9929543:1:exon

position:9929400:1
position: 9929400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9929543:1
position: 9929543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

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position:9930067:1
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urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9935356:1:exon

position:9931642:1
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reference: sequence
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LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 54 long SRA reads, 171 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_021080936.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9874049..9874566,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9874049-9935356:1
so has part: feature:9874049-9874566:1:exon
so has part: feature:9910950-9911038:1:exon
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so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
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so has part: feature:9931642-9935356:1:exon

position:9874049:1
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urn:…
SIO_000300: 1
SIO_000628: feature:9874049-9874566:1:exon

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SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 136 long SRA reads, 172 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_021080931.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9874561..9874966,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9874561-9935356:1
so has part: feature:9874561-9874966:1:exon
so has part: feature:9910950-9911038:1:exon
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so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
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position:9874561:1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 54 long SRA reads, 171 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021080934.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9874585..9874966,9877792..9877927,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9874585-9935356:1
so has part: feature:9874585-9874966:1:exon
so has part: feature:9877792-9877927:1:exon
so has part: feature:9910950-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
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so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9935356:1:exon

position:9874585:1
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reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:9874585-9874966:1:exon

urn:…
SIO_000300: 2
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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 54 long SRA reads, 171 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_021080935.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9874585..9874966,9877792..9877907,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9874585-9935356:1
so has part: feature:9874585-9874966:1:exon
so has part: feature:9877792-9877907:1:exon
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so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:9874585-9874966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9877792-9877907:1:exon

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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 64 long SRA reads, 151 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_021080939.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9874585..9874966,9910950..9911038,9911595..9914841,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9874585-9935356:1
so has part: feature:9874585-9874966:1:exon
so has part: feature:9910950-9911038:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:9874585-9874966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 3
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position:9911595:1
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reference: sequence
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position:9914841:1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 56 long SRA reads, 144 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_013991053.2
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9874585..9874966,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9931642..9935356)
location: region:9874585-9935356:1
so has part: feature:9874585-9874966:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:9874585-9874966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 54 long SRA reads, 171 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_021080938.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9875032..9875060,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9875032-9935356:1
so has part: feature:9875032-9875060:1:exon
so has part: feature:9910950-9911038:1:exon
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so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9935356:1:exon

position:9875032:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:9875032-9875060:1:exon

position:9875060:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

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SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 54 long SRA reads, 171 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_021080932.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9877270..9877927,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9877270-9935356:1
so has part: feature:9877270-9877927:1:exon
so has part: feature:9910950-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
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so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9935356:1:exon

position:9877270:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:9877270-9877927:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

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SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 54 long SRA reads, 171 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_021080933.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9877270..9877907,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9877270-9935356:1
so has part: feature:9877270-9877907:1:exon
so has part: feature:9910950-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
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so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:9877270-9877907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 35 long SRA reads, 144 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_021080942.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9877270..9877907,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9931642..9935356)
location: region:9877270-9935356:1
so has part: feature:9877270-9877907:1:exon
so has part: feature:9910950-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9931642-9935356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9877270-9877907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 54 long SRA reads, 171 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_021080937.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9907994..9909075,9910950..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9907994-9935356:1
so has part: feature:9907994-9909075:1:exon
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so has part: feature:9931642-9935356:1:exon

position:9907994:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9907994-9909075:1:exon

position:9909075:1
position: 9909075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 48 long SRA reads, 151 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_021080940.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910950..9911038,9914787..9914841,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9910950-9935356:1
so has part: feature:9910950-9911038:1:exon
so has part: feature:9914787-9914841:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9935356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9910950-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9914787-9914841:1:exon

position:9914787:1
position: 9914787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936590.1
type: Protein
SIO_000068: ncbiprotein

position:9910978:1
position: 9910978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9932825:1
position: 9932825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936591.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936592.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936593.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936594.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936595.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936596.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X1
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936597.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X3
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9931642-9932825:1:exon

XP_013846507.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X3
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936601.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X3
translation: MDEDELELQPQETNTFFDEIGADDTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9910978..9911038,9916632..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9931642..9932825)
location: region:9910978-9932825:1
so has part: feature:9910978-9911038:1:exon
so has part: feature:9916632-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9931642-9932825:1:exon

XP_013846511.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9910978-9911038:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9916632-9917192:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X2
translation: MDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9916649..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9916649-9932825:1
so has part: feature:9916649-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936598.1
type: Protein
SIO_000068: ncbiprotein

position:9916649:1
position: 9916649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9916649-9917192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X2
translation: MDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQDVIEDVVIEDVHCSDILEEADVSENVIIPEQVLASEVTEEVSLAHCTVPDDVLASDITSASISMPEQVLTSESIHVSEHIEHIHNSVVEAEIVTDPLTADVVSEEVLVADCASEAVIDANGIPVDQQDGDKSSCEDYLMISLDDAGKIEHDGSSEMTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9916649..9917192,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9916649-9932825:1
so has part: feature:9916649-9917192:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936599.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9916649-9917192:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9931642-9932825:1:exon

LOC100624329
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC100624329
product: zinc finger X-chromosomal protein, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 47 long SRA reads, 145 Proteins, and 90% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_021080943.1
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9922868..9927654,9928932..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9935356)
location: region:9922868-9935356:1
so has part: feature:9922868-9927654:1:exon
so has part: feature:9928932-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9935356:1:exon

position:9922868:1
position: 9922868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9922868-9927654:1:exon

position:9927654:1
position: 9927654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9928932-9929081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:9931642-9935356:1:exon

LOC100624329
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC100624329
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger X-chromosomal protein isoform X4
translation: MTMDAESEINPCKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSMRVPREKMVYMTVNDSQQEDEDLNVAEIADEVYMEVIVGEEDAAVAAAAAAAVHEQQMDDSEIKTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTAIIIGPDGHPLTVYPCLICGKKFKSRGFLKRHMKNHPEHLTKKKYRCTDCDYTTNKKISLHNHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQGLLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLKTHVKTKHSKEMPFKCDICLLTFSDTKDVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHIISVHTKDYPHKCEMCEKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSVHTKDLPFRCKRCRKGFRQQNELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTKDYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP
SIO_010081: LOC100624329
subclass of: SO_0000673
so part of: LOC100624329
location: join(9928973..9929081,9929400..9929543,9929912..9930067,9930525..9930665,9931642..9932825)
location: region:9928973-9932825:1
so has part: feature:9928973-9929081:1:exon
so has part: feature:9929400-9929543:1:exon
so has part: feature:9929912-9930067:1:exon
so has part: feature:9930525-9930665:1:exon
so has part: feature:9931642-9932825:1:exon

XP_020936602.1
type: Protein
SIO_000068: ncbiprotein

position:9928973:1
position: 9928973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9928973-9929081:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9929400-9929543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9929912-9930067:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:9930525-9930665:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:9931642-9932825:1:exon

LOC100624054
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC100624054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10025923..10027064
location: region:10025923-10027064:1
so has part: feature:10025923-10027064:1:exon

100624054
type: Gene
SIO_000068: ncbigene

position:10025923:1
position: 10025923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10027064:1
position: 10027064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10025923-10027064:1:exon

LOC100624054
type: Exon
subclass of: SO_0000147
RO_0002162: 9823
gene: LOC100624054
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100624054
subclass of: SO_0000673
so part of: LOC100624054
location: 10025923..10027064
location: region:10025923-10027064:1
so has part: feature:10025923-10027064:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10025923-10027064:1:exon

AMELY
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: AMELY
note: amelogenin, Y-linked; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 10124811..10132684
location: region:10124811-10132684:1
so has part: feature:10124811-10132684:1:exon
subclass of: SO_0000010

396714
type: Gene
SIO_000068: ncbigene

position:10124811:1
position: 10124811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10132684:1
position: 10132684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10124811-10132684:1:exon

AMELY
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: AMELY
product: amelogenin, Y-linked
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_213800.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_213800.1
SIO_010081: AMELY
subclass of: SO_0000673
so part of: AMELY
location: join(10124811..10124856,10126271..10126336,10128978..10129025,10130390..10130434,10130706..10131122,10132537..10132684)
location: region:10124811-10132684:1
so has part: feature:10124811-10124856:1:exon
so has part: feature:10126271-10126336:1:exon
so has part: feature:10128978-10129025:1:exon
so has part: feature:10130390-10130434:1:exon
so has part: feature:10130706-10131122:1:exon
so has part: feature:10132537-10132684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10124811-10124856:1:exon

position:10124856:1
position: 10124856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10126271-10126336:1:exon

position:10126271:1
position: 10126271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10126336:1
position: 10126336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10128978-10129025:1:exon

position:10128978:1
position: 10128978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10129025:1
position: 10129025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10130390-10130434:1:exon

position:10130390:1
position: 10130390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10130434:1
position: 10130434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10130706-10131122:1:exon

position:10130706:1
position: 10130706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10131122:1
position: 10131122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10132537-10132684:1:exon

position:10132537:1
position: 10132537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AMELY
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: AMELY
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: amelogenin precursor
translation: MGTWIFFACLLGASLAMPLPPHPGHPGYINFSYEVLTPLKWYQNMIRHPYTSYGYEPMGGWLHHQIIPVVSQQTPQSHALQPHHHIPMVPAQQPGIPQQPMMPLPGQHSMTPTQHHQPNLPLPAQQPFQPQPVQPQPHQPLQPQSPMHPIQPLLPQPPLPPMFSMQSLLPDLPLEAWPATDKTKREEVD
SIO_010081: AMELY
subclass of: SO_0000673
so part of: AMELY
location: join(10126283..10126336,10128978..10129025,10130390..10130434,10130706..10131122,10132537..10132542)
location: region:10126283-10132542:1
so has part: feature:10126283-10126336:1:exon
so has part: feature:10128978-10129025:1:exon
so has part: feature:10130390-10130434:1:exon
so has part: feature:10130706-10131122:1:exon
so has part: feature:10132537-10132542:1:exon

NP_998965.1
type: Protein
SIO_000068: ncbiprotein

position:10126283:1
position: 10126283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10132542:1
position: 10132542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10126283-10126336:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10128978-10129025:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10130390-10130434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10130706-10131122:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10132537-10132542:1:exon

LOC110257905
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10163547..10165732
location: region:10163547-10165732:1
so has part: feature:10163547-10165732:1:exon
subclass of: SO_0000010

110257905
type: Gene
SIO_000068: ncbigene

position:10163547:1
position: 10163547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10165732:1
position: 10165732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10163547-10165732:1:exon

LOC110257905
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110257905
product: thymosin beta-4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 130 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 64 samples with support for all annotated introns
transcript id: XM_021080912.1
SIO_010081: LOC110257905
subclass of: SO_0000673
so part of: LOC110257905
location: join(10163547..10163700,10164768..10164881,10165296..10165732)
location: region:10163547-10165732:1
so has part: feature:10163547-10163700:1:exon
so has part: feature:10164768-10164881:1:exon
so has part: feature:10165296-10165732:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10163547-10163700:1:exon

position:10163700:1
position: 10163700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10164768-10164881:1:exon

position:10164768:1
position: 10164768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10164881:1
position: 10164881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10165296-10165732:1:exon

position:10165296:1
position: 10165296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110257905
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9823
gene: LOC110257905
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thymosin beta-4-like
translation: MSDKPDMAEIEKFDKSKLKKTETQEKNPLPSKETIEQEKRAGES
SIO_010081: LOC110257905
subclass of: SO_0000673
so part of: LOC110257905
location: join(10164782..10164881,10165296..10165330)
location: region:10164782-10165330:1
so has part: feature:10164782-10164881:1:exon
so has part: feature:10165296-10165330:1:exon

XP_020936571.1
type: Protein
SIO_000068: ncbiprotein

position:10164782:1
position: 10164782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10165330:1
position: 10165330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10164782-10164881:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10165296-10165330:1:exon

LOC110257893
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257893
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(10224376..10224921)
location: region:10224376-10224921:-1
so has part: feature:10224376-10224921:-1:exon

110257893
type: Gene
SIO_000068: ncbigene

position:10224376:-1
position: 10224376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10224921:-1
position: 10224921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10224376-10224921:-1:exon

LOC110257893
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9823
gene: LOC110257893
product: 40S ribosomal protein S10 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 14 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_002340906.1
SIO_010081: LOC110257893
so part of: LOC110257893
location: complement(10224376..10224921)
location: region:10224376-10224921:-1
so has part: feature:10224376-10224921:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10224376-10224921:-1:exon

LOC110257896
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110257896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10380563..10385567)
location: region:10380563-10385567:-1
so has part: feature:10380563-10385567:-1:exon
subclass of: SO_0000011

110257896
type: Gene
SIO_000068: ncbigene

position:10380563:-1
position: 10380563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10385567:-1
position: 10385567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10380563-10385567:-1:exon

LOC110257896
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257896
product: uncharacterized LOC110257896, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_002340909.1
SIO_010081: LOC110257896
subclass of: SO_0000673
so part of: LOC110257896
location: complement(join(10380563..10380846,10381060..10381212,10383056..10383144,10385415..10385567))
location: region:10380563-10385567:-1
so has part: feature:10385415-10385567:-1:exon
so has part: feature:10383056-10383144:-1:exon
so has part: feature:10381060-10381212:-1:exon
so has part: feature:10380563-10380846:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10385415-10385567:-1:exon

position:10385415:-1
position: 10385415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10383056-10383144:-1:exon

position:10383056:-1
position: 10383056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10383144:-1
position: 10383144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10381060-10381212:-1:exon

position:10381060:-1
position: 10381060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10381212:-1
position: 10381212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10380563-10380846:-1:exon

position:10380846:-1
position: 10380846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257896
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257896
product: uncharacterized LOC110257896, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XR_002340908.1
SIO_010081: LOC110257896
subclass of: SO_0000673
so part of: LOC110257896
location: complement(join(10380563..10380851,10381060..10381212,10383056..10383144,10385415..10385567))
location: region:10380563-10385567:-1
so has part: feature:10385415-10385567:-1:exon
so has part: feature:10383056-10383144:-1:exon
so has part: feature:10381060-10381212:-1:exon
so has part: feature:10380563-10380851:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10385415-10385567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10383056-10383144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10381060-10381212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10380563-10380851:-1:exon

position:10380851:-1
position: 10380851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC110257896
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9823
nc RNA class: lncRNA
gene: LOC110257896
product: uncharacterized LOC110257896, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XR_002340907.1
SIO_010081: LOC110257896
subclass of: SO_0000673
so part of: LOC110257896
location: complement(join(10380563..10381212,10383056..10383144,10385415..10385565))
location: region:10380563-10385565:-1
so has part: feature:10385415-10385565:-1:exon
so has part: feature:10383056-10383144:-1:exon
so has part: feature:10380563-10381212:-1:exon

position:10385565:-1
position: 10385565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10385415-10385565:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10383056-10383144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10380563-10381212:-1:exon

LOC110255257
type: Gene
subclass of: SO_0000704
RO_0002162: 9823
gene: LOC110255257
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10385586..10444524
location: region:10385586-10444524:1
so has part: feature:10385586-10444524:1:exon
subclass of: SO_0000010

110255257
type: Gene
SIO_000068: ncbigene

position:10385586:1
position: 10385586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10444524:1
position: 10444524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10385586-10444524:1:exon

LOC110255257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255257
product: oral-facial-digital syndrome 1 protein-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 13 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_021080897.1
SIO_010081: LOC110255257
subclass of: SO_0000673
so part of: LOC110255257
location: join(10385586..10385966,10386119..10386217,10406805..10407011,10409132..10409200,10409287..10409317,10416102..10416209,10418292..10418428,10419018..10419191,10421734..10421840,10423629..10423748,10425838..10425911,10426810..10426901,10427928..10428117,10433991..10434121,10434653..10434764,10436651..10437256,10437549..10437636,10438536..10438633,10440200..10440319,10442159..10442316,10443312..10443473,10444024..10444091,10444386..10444524)
location: region:10385586-10444524:1
so has part: feature:10385586-10385966:1:exon
so has part: feature:10386119-10386217:1:exon
so has part: feature:10406805-10407011:1:exon
so has part: feature:10409132-10409200:1:exon
so has part: feature:10409287-10409317:1:exon
so has part: feature:10416102-10416209:1:exon
so has part: feature:10418292-10418428:1:exon
so has part: feature:10419018-10419191:1:exon
so has part: feature:10421734-10421840:1:exon
so has part: feature:10423629-10423748:1:exon
so has part: feature:10425838-10425911:1:exon
so has part: feature:10426810-10426901:1:exon
so has part: feature:10427928-10428117:1:exon
so has part: feature:10433991-10434121:1:exon
so has part: feature:10434653-10434764:1:exon
so has part: feature:10436651-10437256:1:exon
so has part: feature:10437549-10437636:1:exon
so has part: feature:10438536-10438633:1:exon
so has part: feature:10440200-10440319:1:exon
so has part: feature:10442159-10442316:1:exon
so has part: feature:10443312-10443473:1:exon
so has part: feature:10444024-10444091:1:exon
so has part: feature:10444386-10444524:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10385586-10385966:1:exon

position:10385966:1
position: 10385966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10386119-10386217:1:exon

position:10386119:1
position: 10386119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10386217:1
position: 10386217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10406805-10407011:1:exon

position:10406805:1
position: 10406805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10407011:1
position: 10407011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10409132-10409200:1:exon

position:10409132:1
position: 10409132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10409200:1
position: 10409200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10409287-10409317:1:exon

position:10409287:1
position: 10409287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10409317:1
position: 10409317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10416102-10416209:1:exon

position:10416102:1
position: 10416102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10416209:1
position: 10416209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10418292-10418428:1:exon

position:10418292:1
position: 10418292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10418428:1
position: 10418428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10419018-10419191:1:exon

position:10419018:1
position: 10419018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10419191:1
position: 10419191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10421734-10421840:1:exon

position:10421734:1
position: 10421734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10421840:1
position: 10421840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10423629-10423748:1:exon

position:10423629:1
position: 10423629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10423748:1
position: 10423748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10425838-10425911:1:exon

position:10425838:1
position: 10425838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10425911:1
position: 10425911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10426810-10426901:1:exon

position:10426810:1
position: 10426810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10426901:1
position: 10426901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10427928-10428117:1:exon

position:10427928:1
position: 10427928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10428117:1
position: 10428117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10433991-10434121:1:exon

position:10433991:1
position: 10433991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10434121:1
position: 10434121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10434653-10434764:1:exon

position:10434653:1
position: 10434653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10434764:1
position: 10434764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10436651-10437256:1:exon

position:10436651:1
position: 10436651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10437256:1
position: 10437256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10437549-10437636:1:exon

position:10437549:1
position: 10437549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10437636:1
position: 10437636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10438536-10438633:1:exon

position:10438536:1
position: 10438536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10438633:1
position: 10438633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:10440200-10440319:1:exon

position:10440200:1
position: 10440200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10440319:1
position: 10440319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:10442159-10442316:1:exon

position:10442159:1
position: 10442159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10442316:1
position: 10442316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:10443312-10443473:1:exon

position:10443312:1
position: 10443312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10443473:1
position: 10443473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:10444024-10444091:1:exon

position:10444024:1
position: 10444024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10444091:1
position: 10444091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:10444386-10444524:1:exon

position:10444386:1
position: 10444386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC110255257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255257
product: oral-facial-digital syndrome 1 protein-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 13 ESTs, 2 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_021080898.1
SIO_010081: LOC110255257
subclass of: SO_0000673
so part of: LOC110255257
location: join(10385602..10385866,10386119..10386217,10406805..10407011,10409132..10409200,10409287..10409317,10416102..10416209,10418292..10418428,10419018..10419191,10421734..10421840,10423629..10423748,10425838..10425911,10426810..10426901,10427928..10428117,10433991..10434121,10434653..10434764,10436651..10437256,10437549..10437636,10438536..10438633,10440200..10440319,10442159..10442316,10443312..10443473,10444024..10444091,10444386..10444524)
location: region:10385602-10444524:1
so has part: feature:10385602-10385866:1:exon
so has part: feature:10386119-10386217:1:exon
so has part: feature:10406805-10407011:1:exon
so has part: feature:10409132-10409200:1:exon
so has part: feature:10409287-10409317:1:exon
so has part: feature:10416102-10416209:1:exon
so has part: feature:10418292-10418428:1:exon
so has part: feature:10419018-10419191:1:exon
so has part: feature:10421734-10421840:1:exon
so has part: feature:10423629-10423748:1:exon
so has part: feature:10425838-10425911:1:exon
so has part: feature:10426810-10426901:1:exon
so has part: feature:10427928-10428117:1:exon
so has part: feature:10433991-10434121:1:exon
so has part: feature:10434653-10434764:1:exon
so has part: feature:10436651-10437256:1:exon
so has part: feature:10437549-10437636:1:exon
so has part: feature:10438536-10438633:1:exon
so has part: feature:10440200-10440319:1:exon
so has part: feature:10442159-10442316:1:exon
so has part: feature:10443312-10443473:1:exon
so has part: feature:10444024-10444091:1:exon
so has part: feature:10444386-10444524:1:exon

position:10385602:1
position: 10385602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10385602-10385866:1:exon

position:10385866:1
position: 10385866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10386119-10386217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10406805-10407011:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10409132-10409200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10409287-10409317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10416102-10416209:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10418292-10418428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10419018-10419191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10421734-10421840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10423629-10423748:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10425838-10425911:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10426810-10426901:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10427928-10428117:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10433991-10434121:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10434653-10434764:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10436651-10437256:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10437549-10437636:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10438536-10438633:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10440200-10440319:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10442159-10442316:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10443312-10443473:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10444024-10444091:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10444386-10444524:1:exon

LOC110255257
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9823
gene: LOC110255257
product: oral-facial-digital syndrome 1 protein-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 14 ESTs, 3 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_021080900.1
SIO_010081: LOC110255257
subclass of: SO_0000673
so part of: LOC110255257
location: join(10385603..10385966,10386119..10386217,10406801..10407011,10409132..10409200,10409287..10409317,10416102..10416209,10418292..10418428,10419018..10419191,10421734..10421840,10423629..10423748,10425838..10425911,10426810..10426901,10427928..10428117,10433991..10434121,10434653..10434764,10436651..10437256,10437549..10437636,10438536..10438633,10440200..10440319,10442159..10442316,10443312..10443473,10444024..10444091,10444386..10444524)
location: region:10385603-10444524:1
so has part: feature:10385603-10385966:1:exon
so has part: feature:10386119-10386217:1:exon
so has part: feature:10406801-10407011:1:exon
so has part: feature:10409132-10409200:1:exon
so has part: feature:10409287-10409317:1:exon
so has part: feature:10416102-10416209:1:exon
so has part: feature:10418292-10418428:1:exon
so has part: feature:10419018-10419191:1:exon
so has part: feature:10421734-10421840:1:exon
so has part: feature:10423629-10423748:1:exon
so has part: feature:10425838-10425911:1:exon
so has part: feature:10426810-10426901:1:exon
so has part: feature:10427928-10428117:1:exon
so has part: feature:10433991-10434121:1:exon
so has part: feature:10434653-10434764:1:exon
so has part: feature:10436651-10437256:1:exon
so has part: feature:10437549-10437636:1:exon
so has part: feature:10438536-10438633:1:exon
so has part: feature:10440200-10440319:1:exon
so has part: feature:10442159-10442316:1:exon
so has part: feature:10443312-10443473:1:exon
so has part: feature:10444024-10444091:1:exon
so has part: feature:10444386-10444524:1:exon

position:10385603:1
position: 10385603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10385603-10385966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10386119-10386217:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10406801-10407011:1:exon

position:10406801:1
position: 10406801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10409132-10409200:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10409287-10409317:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10416102-10416209:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10418292-10418428:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10419018-10419191:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10421734-10421840:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10423629-10423748:1:exon