Strawberry lethal yellows phytoplasma (CPA) str. NZSb11, complete sequence.
Strawberry lethal yellows phytoplasma (CPA) str. NZSb11
Bacteria; Mycoplasmatota; Mollicutes; Acholeplasmatales; Acholeplasmataceae; Candidatus Phytoplasma; 16SrXII (Stolbur group).
Comparison of the complete genome sequence of two closely related isolates of 'Candidatus Phytoplasma australiense' reveals genome plasticity
Submitted (27-JAN-2011) AgriGenesis Biosciences Ltd, P.O. Box 50, Auckland, New Zealand
REFSEQ INFORMATION: The reference sequence is identical to\nCP002548.1.\nDNA Source material is available from: New Zealand Institute for\nPlant and Food, Research Ltd,Private Bag 92169, Auckland 1142, New\nZealand.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/12/2022 14:09:11\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.3\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 979\nCDSs (total) :: 935\nGenes (coding) :: 885\nCDSs (with protein) :: 885\nGenes (RNA) :: 44\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 35\nncRNAs :: 3\nPseudo Genes (total) :: 50\nCDSs (without protein) :: 50\nPseudo Genes (ambiguous residues) :: 0 of 50\nPseudo Genes (frameshifted) :: 20 of 50\nPseudo Genes (incomplete) :: 31 of 50\nPseudo Genes (internal stop) :: 7 of 50\nPseudo Genes (multiple problems) :: 7 of 50\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_012358634.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_015637581.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF012372.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358637.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637585.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358639.1
COORDINATES: protein motif:HMM:NF019887.2
COORDINATES: similar to AA sequence:RefSeq:WP_011412384.1
GO:0016787 - hydrolase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358644.1
Spx/MgsR family RNA polymerase-binding regulatory protein
COORDINATES: nucleotide motif:Rfam:14.4:RF00168
Lysine riboswitch is most abundant in Firmicutes and Gammaproteobacteria where they are found upstream of a number of genes involved in lysine biosynthesis, transport and catabolism; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012738.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637594.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358649.1
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_011412943.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
COORDINATES: similar to AA sequence:RefSeq:WP_012358651.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358652.1
COORDINATES: similar to AA sequence:RefSeq:WP_011161092.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358654.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358655.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358656.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025063.2
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637705.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358658.1
Sequence-variable mosaic (SVM) proteins are highly divergent, but recognized by the shared signal peptide region that defines them; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015638174.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015637617.1
reverse transcriptase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015638175.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637703.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015638200.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015638254.1
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637772.1
DNA double-strand break repair protein Rad50
COORDINATES: similar to AA sequence:RefSeq:WP_015638281.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358850.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358919.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012359235.1
COORDINATES: protein motif:HMM:NF012870.2
DDE-type integrase/transposase/recombinase
COORDINATES: similar to AA sequence:RefSeq:WP_015637605.1
integrase core domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015637619.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_015637620.1
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015638199.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637623.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017193465.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637767.1
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
Dam family site-specific DNA-(adenine-N6)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_015637766.1
COORDINATES: similar to AA sequence:RefSeq:WP_017192601.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637678.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637729.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637677.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358667.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637675.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638115.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637632.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637633.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638125.1
DNA double-strand break repair rad50 ATPase
COORDINATES: similar to AA sequence:RefSeq:WP_015638036.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637639.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012358672.1
COORDINATES: similar to AA sequence:RefSeq:WP_017466665.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358674.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: similar to AA sequence:RefSeq:WP_012358675.1
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358687.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358688.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412711.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358690.1
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011412708.1
COORDINATES: similar to AA sequence:RefSeq:WP_019165370.1
GO:0015935 - small ribosomal subunit [Evidence IEA]
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358694.1
GO:0015444 - P-type magnesium transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412525.1
DNA integrity scanning protein DisA nucleotide-binding domain protein
COORDINATES: similar to AA sequence:RefSeq:WP_015637661.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358698.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: similar to AA sequence:RefSeq:WP_012358699.1
DnaB-like helicase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015638249.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015638020.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638154.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637725.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637769.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638031.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358829.1
COORDINATES: protein motif:HMM:NF024776.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015637777.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358830.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0008374 - O-acyltransferase activity [Evidence IEA]
GO:0006654 - phosphatidic acid biosynthetic process [Evidence IEA]
glycerol-3-phosphate 1-O-acyltransferase PlsY
COORDINATES: similar to AA sequence:RefSeq:WP_012358834.1
GO:0042625 - ATPase-coupled ion transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358835.1
GO:0030435 - sporulation resulting in formation of a cellular spore [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637697.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_015637698.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358838.1
COORDINATES: protein motif:HMM:NF024908.2
COORDINATES: similar to AA sequence:RefSeq:WP_015637700.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358679.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637735.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637601.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358840.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358920.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015638304.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638201.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638296.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637715.1
internal stop; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_015638285.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358812.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358914.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638111.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638291.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637626.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638053.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637730.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358927.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358782.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012504408.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637746.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637748.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017193026.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358876.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_012358877.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638030.1
COORDINATES: protein motif:HMM:NF014442.2
COORDINATES: similar to AA sequence:RefSeq:WP_015637763.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358821.1
COORDINATES: protein motif:HMM:NF022626.2
COORDINATES: similar to AA sequence:RefSeq:WP_015637610.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638384.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358684.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638038.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637690.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160805.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358935.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358936.1
COORDINATES: protein motif:HMM:NF013821.2
COORDINATES: protein motif:HMM:NF018299.2
COORDINATES: similar to AA sequence:RefSeq:WP_012358938.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358939.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004994705.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358941.1
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013738.2
iron-sulfur cluster assembly scaffold protein
COORDINATES: similar to AA sequence:RefSeq:WP_015637718.1
COORDINATES: protein motif:HMM:NF015736.2
COORDINATES: similar to AA sequence:RefSeq:WP_015638028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359183.1
COORDINATES: protein motif:HMM:NF013593.2
COORDINATES: similar to AA sequence:RefSeq:WP_012358950.1
COORDINATES: protein motif:HMM:NF024673.2
COORDINATES: similar to AA sequence:RefSeq:WP_004994600.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358954.1
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015637808.1
metal ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012358956.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358957.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358958.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358959.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358960.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358961.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358962.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358963.1
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012358964.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637815.1
COORDINATES: similar to AA sequence:RefSeq:WP_017192524.1
COORDINATES: similar to AA sequence:RefSeq:WP_011275926.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637817.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358969.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002942223.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637820.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637821.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358973.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358974.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358975.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358976.1
GO:0052913 - 16S rRNA (guanine(966)-N(2))-methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
COORDINATES: similar to AA sequence:RefSeq:WP_011160674.1
bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK
COORDINATES: similar to AA sequence:RefSeq:WP_012358978.1
GO:0008962 - phosphatidylglycerophosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358979.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637825.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358981.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637826.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358983.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_012358984.1
COORDINATES: similar to AA sequence:RefSeq:WP_017191540.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
class II fructose-1,6-bisphosphate aldolase
COORDINATES: similar to AA sequence:RefSeq:WP_011412827.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358987.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637833.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358989.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017192683.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358991.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358992.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358993.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358994.1
GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637838.1
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: similar to AA sequence:RefSeq:WP_012358997.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358998.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358999.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637845.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637849.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637850.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359004.1
phenylalanine--tRNA ligase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012359005.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359007.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637852.1
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637853.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359010.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359011.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359012.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637855.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359014.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012974.2
COORDINATES: protein motif:HMM:NF024221.2
COORDINATES: similar to AA sequence:RefSeq:WP_012359016.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
SUF system NifU family Fe-S cluster assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_015637861.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012359018.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412589.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359020.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_012359021.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637865.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359023.1
GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637867.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359026.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359027.1
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359028.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359029.1
GO:0009408 - response to heat [Evidence IEA]
heat-inducible transcriptional repressor HrcA
COORDINATES: similar to AA sequence:RefSeq:WP_012359031.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412775.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_011412776.1
COORDINATES: similar to AA sequence:RefSeq:WP_000090796.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011160599.1
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359037.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412780.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0019205 - nucleobase-containing compound kinase activity [Evidence IEA]; GO:0016776 - phosphotransferase activity, phosphate group as acceptor [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359039.1
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359040.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359041.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359042.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359043.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160590.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011160589.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359046.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359047.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637887.1
COORDINATES: similar to AA sequence:RefSeq:WP_002878195.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359050.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359051.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359052.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359053.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160580.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359055.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359056.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359057.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160576.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359059.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359060.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359061.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637890.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637891.1
GO:0003924 - GTPase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011160463.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359065.1
ribosomal-processing cysteine protease Prp
COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359067.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637893.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359069.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359070.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359071.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359072.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359073.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0009228 - thiamine biosynthetic process [Evidence IEA]; GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637900.1
COORDINATES: similar to AA sequence:RefSeq:WP_017191853.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359077.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359078.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637905.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359080.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359081.1
GO:0019843 - rRNA binding [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359082.1
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359083.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637910.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359085.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637912.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359087.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359088.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637916.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359090.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359091.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637924.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359094.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: similar to AA sequence:RefSeq:WP_012359095.1
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit delta
COORDINATES: similar to AA sequence:RefSeq:WP_012359096.1
GO:0016780 - phosphotransferase activity, for other substituted phosphate groups [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012359097.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637926.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359100.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359101.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359102.1
GO:0043811 - phosphate:acyl-[acyl carrier protein] acyltransferase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359103.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359104.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359105.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359106.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412726.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637932.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: similar to AA sequence:RefSeq:WP_011412728.1
GO:0042578 - phosphoric ester hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012504282.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359111.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359112.1
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_012359113.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637936.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: similar to AA sequence:RefSeq:WP_012359115.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA]; GO:0031167 - rRNA methylation [Evidence IEA]
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_017191782.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637946.1
COORDINATES: similar to AA sequence:RefSeq:WP_001040566.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637949.1
COORDINATES: similar to AA sequence:RefSeq:WP_013054923.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160636.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637952.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_011412742.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0032549 - ribonucleoside binding [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_015637954.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359129.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359130.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160630.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637958.1
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_012359133.1
COORDINATES: protein motif:HMM:NF001764.0
COORDINATES: similar to AA sequence:RefSeq:WP_012359134.1
GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0009451 - RNA modification [Evidence IEA]
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB
COORDINATES: similar to AA sequence:RefSeq:WP_015637960.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005215 - transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637961.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: similar to AA sequence:RefSeq:WP_012359137.1
YidC/Oxa1 family membrane protein insertase
COORDINATES: similar to AA sequence:RefSeq:WP_012359138.1
GO:0004526 - ribonuclease P activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000831329.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412755.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359141.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359142.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359143.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359144.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359145.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359146.1
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: nucleotide motif:Rfam:14.4:RF00011
COORDINATES: similar to AA sequence:RefSeq:WP_012358886.1
COORDINATES: protein motif:HMM:NF013704.2
COORDINATES: similar to AA sequence:RefSeq:WP_011160949.1
GO:0045250 - cytosolic pyruvate dehydrogenase complex [Evidence IEA]
GO:0004739 - pyruvate dehydrogenase (acetyl-transferring) activity [Evidence IEA]
GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA]
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012359149.1
alpha-ketoacid dehydrogenase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_012359150.1
dihydrolipoamide acetyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012359151.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359152.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359154.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359155.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637986.1
GO:0004819 - glutamine-tRNA ligase activity [Evidence IEA]
GO:0006425 - glutaminyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359157.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637989.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359161.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359162.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015637996.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012504472.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359165.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359167.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359169.1
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359172.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359173.1
[cytidine(C)-cytidine(C)-adenosine (A)]-adding enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_012359174.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359175.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359176.1
COORDINATES: similar to AA sequence:RefSeq:WP_012242212.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359178.1
COORDINATES: similar to AA sequence:RefSeq:WP_017193003.1
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: similar to AA sequence:RefSeq:WP_012358879.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359181.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359121.1
COORDINATES: similar to AA sequence:RefSeq:WP_017192249.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637742.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638112.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638114.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638044.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358903.1
COORDINATES: similar to AA sequence:RefSeq:WP_017192989.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637755.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638120.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638283.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637774.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638253.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638267.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638124.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638280.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638116.1
COORDINATES: protein motif:HMM:NF024671.2
COORDINATES: similar to AA sequence:RefSeq:WP_015637713.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358727.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638061.1
COORDINATES: protein motif:HMM:NF012651.2
GO:0003697 - single-stranded DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015638118.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359185.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359198.1
cytadherence high molecular weight protein 2
COORDINATES: similar to AA sequence:RefSeq:WP_012359199.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638080.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638082.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012359202.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359203.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359204.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359206.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412879.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012359208.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638089.1
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011160500.1
frameshifted; internal stop; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_012359210.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359211.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012359212.1
2-hydroxycarboxylate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011412335.1
malic enzyme-like NAD(P)-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012359214.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359215.1
GO:0043937 - regulation of sporulation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015638274.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638058.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638043.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638046.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359118.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359119.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638308.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359230.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638108.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638383.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358772.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358773.1
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_015638130.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358775.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638131.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358777.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358778.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160716.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358797.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358798.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011160851.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: similar to AA sequence:RefSeq:WP_012358800.1
GO:0003725 - double-stranded RNA binding [Evidence IEA]
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB
COORDINATES: similar to AA sequence:RefSeq:WP_012358801.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638141.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358805.1
GO:0004645 - 1,4-alpha-oligoglucan phosphorylase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011160795.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358807.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638235.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638306.1
COORDINATES: similar to AA sequence:RefSeq:WP_012504584.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358701.1
COORDINATES: protein motif:HMM:NF011109.0
COORDINATES: similar to AA sequence:RefSeq:WP_015638157.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358704.1
GO:0000036 - acyl carrier activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004994602.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638161.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358706.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011412932.1
DNA-directed RNA polymerase subunit omega
COORDINATES: similar to AA sequence:RefSeq:WP_012358708.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_012358710.1
GO:0015297 - antiporter activity [Evidence IEA]; GO:0042910 - xenobiotic transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015638166.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358712.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
class 1b ribonucleoside-diphosphate reductase subunit beta
COORDINATES: protein motif:HMM:TIGR00220.1
GO:0008381 - mechanosensitive ion channel activity [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: similar to AA sequence:RefSeq:WP_011160434.1
COORDINATES: similar to AA sequence:RefSeq:WP_017191448.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638173.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358841.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638150.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637606.1
COORDINATES: protein motif:HMM:NF014177.2
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358719.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358720.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638188.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358722.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638190.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011160428.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358725.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358728.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358729.1
GO:0030145 - manganese ion binding [Evidence IEA]; GO:0070006 - metalloaminopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358730.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412376.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358733.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358734.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358735.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358736.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358738.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358739.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358740.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358741.1
ECF-type riboflavin transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_015638220.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358743.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: similar to AA sequence:RefSeq:WP_012358745.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358746.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358747.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358748.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638224.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160386.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358751.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358752.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358755.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638237.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358758.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358764.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358765.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638244.1
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358767.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012358768.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358769.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412773.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_015638387.1
COORDINATES: protein motif:HMM:NF019623.2
PD-(D/E)XK nuclease domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_015638039.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412560.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638151.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358899.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638260.1
COORDINATES: protein motif:HMM:NF023535.2
COORDINATES: similar to AA sequence:RefSeq:WP_012358818.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638333.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358824.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638290.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638045.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359116.1
COORDINATES: similar to AA sequence:RefSeq:WP_015637727.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358911.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160719.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358852.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359237.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359219.1
amino acid ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012359220.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359221.1
EcoRI family type II restriction endonuclease
COORDINATES: similar to AA sequence:RefSeq:WP_015638314.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359224.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359225.1
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011160613.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359227.1
GO:0004730 - pseudouridylate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359228.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160697.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412661.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359241.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358931.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0006351 - DNA-templated transcription [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012358915.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638264.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358912.1
COORDINATES: similar to AA sequence:RefSeq:WP_017598728.1
COORDINATES: protein motif:HMM:NF012381.2
COORDINATES: similar to AA sequence:RefSeq:WP_017192811.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012359244.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638350.1
COORDINATES: similar to AA sequence:RefSeq:WP_011412374.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359247.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: similar to AA sequence:RefSeq:WP_012359248.1
COORDINATES: similar to AA sequence:RefSeq:WP_011161017.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359250.1
GO:0008534 - oxidized purine nucleobase lesion DNA N-glycosylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359251.1
5'-3' exonuclease H3TH domain-containing protein
COORDINATES: protein motif:HMM:NF014972.2
COORDINATES: similar to AA sequence:RefSeq:WP_012359252.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017193622.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: similar to AA sequence:RefSeq:WP_015637765.1
COORDINATES: similar to AA sequence:RefSeq:WP_011160438.1
COORDINATES: similar to AA sequence:RefSeq:WP_017193034.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638279.1
COORDINATES: similar to AA sequence:RefSeq:WP_012358891.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359256.1
COORDINATES: similar to AA sequence:RefSeq:WP_015638390.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359258.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359261.1
transcription antitermination protein NusB
COORDINATES: similar to AA sequence:RefSeq:WP_012359262.1
COORDINATES: similar to AA sequence:RefSeq:WP_012359263.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012359264.1