Equus caballus isolate Twilight breed thoroughbred chromosome 31, EquCab3.0, whole genome shotgun sequence.
type: Entry
definition: Equus caballus isolate Twilight breed thoroughbred chromosome 31, EquCab3.0, whole genome shotgun sequence.
sequence version: NC_009174.3
sequence date: 2018-01-26
sequence: sequence
division: CON
label: NC_009174.3
type: RefSeq
SIO_000068: refseq
dblink: PRJNA19129
dblink: SAMN02953672
keyword: WGS
keyword: RefSeq
source: Equus caballus (horse)
organism: Equus caballus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM009178.1.\nOn Jan 25, 2018 this sequence version replaced NC_009174.2.\nAssembly name: EquCab3.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of California,\nSanta Cruz on 2018/01/05. The original whole-genome shotgun project\nhas the accession PJAA00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: University of California, Santa Cruz\nAssembly Date :: 2017\nAssembly Method :: Celera Assembler v. 2017; HiRise v. 2017\nAssembly Name :: EquCab3.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 88.0x\nSequencing Technology :: Sanger; Illumina HiSeq; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Equus caballus Annotation Release\n 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 26001039
topology: linear
so has quality: SO_0000987
location: 1..26001039
location: region:1-26001039:1
RO_0002162: 9796

NC_009174
type: RefSeq
SIO_000068: refseq

PRJNA19129
type: BioProject
SIO_000068: bioproject

SAMN02953672
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:26001039:1
position: 26001039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-26001039:1:source
so part of: sequence
organism: Equus caballus
mol type: genomic DNA
isolate: Twilight
chromosome: 31
sex: female
breed: thoroughbred

9796
type: Taxonomy
SIO_000068: taxonomy

LOC100146467
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100146467
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(389..5664)
location: region:389-5664:-1
so has part: feature:389-5664:-1:exon

100146467
type: Gene
SIO_000068: ncbigene

position:389:-1
position: 389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5664:-1
position: 5664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389-5664:-1:exon

LOC100146467
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100146467
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100146467
subclass of: SO_0000673
so part of: LOC100146467
location: complement(389..5664)
location: region:389-5664:-1
so has part: feature:389-5664:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389-5664:-1:exon

LOC100146112
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100146112
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6087..6767)
location: region:6087-6767:-1
so has part: feature:6087-6767:-1:exon

100146112
type: Gene
SIO_000068: ncbigene

position:6087:-1
position: 6087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6767:-1
position: 6767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6087-6767:-1:exon

LOC100146112
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100146112
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100146112
subclass of: SO_0000673
so part of: LOC100146112
location: complement(6087..6767)
location: region:6087-6767:-1
so has part: feature:6087-6767:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6087-6767:-1:exon

LOC111771388
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC111771388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13906..22323)
location: region:13906-22323:-1
so has part: feature:13906-22323:-1:exon
subclass of: SO_0000011

111771388
type: Gene
SIO_000068: ncbigene

position:13906:-1
position: 13906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22323:-1
position: 22323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13906-22323:-1:exon

LOC111771388
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9796
nc RNA class: lncRNA
gene: LOC111771388
product: uncharacterized LOC111771388
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002805194.1
SIO_010081: LOC111771388
subclass of: SO_0000673
so part of: LOC111771388
location: complement(join(13906..13916,15441..15444,22167..22323))
location: region:13906-22323:-1
so has part: feature:22167-22323:-1:exon
so has part: feature:15441-15444:-1:exon
so has part: feature:13906-13916:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22167-22323:-1:exon

position:22167:-1
position: 22167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15441-15444:-1:exon

position:15441:-1
position: 15441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15444:-1
position: 15444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13906-13916:-1:exon

position:13916:-1
position: 13916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111771381
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC111771381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22626..25027
location: region:22626-25027:1
so has part: feature:22626-25027:1:exon
subclass of: SO_0000010

111771381
type: Gene
SIO_000068: ncbigene

position:22626:1
position: 22626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:25027:1
position: 25027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22626-25027:1:exon

LOC111771381
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC111771381
product: ral guanine nucleotide dissociation stimulator-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023632903.1
SIO_010081: LOC111771381
subclass of: SO_0000673
so part of: LOC111771381
location: join(22626..22741,23149..23288,23435..23739,24512..24727,24926..25027)
location: region:22626-25027:1
so has part: feature:22626-22741:1:exon
so has part: feature:23149-23288:1:exon
so has part: feature:23435-23739:1:exon
so has part: feature:24512-24727:1:exon
so has part: feature:24926-25027:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22626-22741:1:exon

position:22741:1
position: 22741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:23149-23288:1:exon

position:23149:1
position: 23149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23288:1
position: 23288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:23435-23739:1:exon

position:23435:1
position: 23435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:23739:1
position: 23739
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:24512-24727:1:exon

position:24512:1
position: 24512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24727:1
position: 24727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:24926-25027:1:exon

position:24926:1
position: 24926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111771381
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC111771381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator-like
translation: MGPRPPENRKGGWAELPPRDPIPAESQLFLPPFLHIHPLEPLQFPCWTLQLATLHVSFGGLHVEGHAYLLPGHLEHLKAIEAKQKEPAPKLLPHPEPEPEPEPAPVLESSPAPAPPPVAELEPASPASDPTGLEEGPPLTSAPVPAPELEPTGPWAVTAENQLREEKLNILDFPPRLVAEQLTRMEAELFKKLVPAHCLGSIWSQRDSRDHKYLAPTIRDTVAHTNTLANSVIATCLGALGMTAQDRARMVELWIHVPKLKILVPDSVTPQVPGVSSLGFLGICLIQNRRSP
SIO_010081: LOC111771381
subclass of: SO_0000673
so part of: LOC111771381
location: join(22626..22741,23149..23288,23435..23739,24512..24727,24926..25027)
location: region:22626-25027:1
so has part: feature:22626-22741:1:exon
so has part: feature:23149-23288:1:exon
so has part: feature:23435-23739:1:exon
so has part: feature:24512-24727:1:exon
so has part: feature:24926-25027:1:exon

XP_023488671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22626-22741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:23149-23288:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:23435-23739:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:24512-24727:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:24926-25027:1:exon

LOC102148909
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC102148909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 26167..29177
location: region:26167-29177:1
so has part: feature:26167-29177:1:exon
subclass of: SO_0000010

102148909
type: Gene
SIO_000068: ncbigene

position:26167:1
position: 26167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:29177:1
position: 29177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26167-29177:1:exon

LOC102148909
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC102148909
product: ral guanine nucleotide dissociation stimulator
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_023632931.1
SIO_010081: LOC102148909
subclass of: SO_0000673
so part of: LOC102148909
location: join(26167..26620,27061..27135,27712..27738,28110..28231,28437..28540,28874..29177)
location: region:26167-29177:1
so has part: feature:26167-26620:1:exon
so has part: feature:27061-27135:1:exon
so has part: feature:27712-27738:1:exon
so has part: feature:28110-28231:1:exon
so has part: feature:28437-28540:1:exon
so has part: feature:28874-29177:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:26167-26620:1:exon

position:26620:1
position: 26620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:27061-27135:1:exon

position:27061:1
position: 27061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27135:1
position: 27135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:27712-27738:1:exon

position:27712:1
position: 27712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:27738:1
position: 27738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28110-28231:1:exon

position:28110:1
position: 28110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28231:1
position: 28231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:28437-28540:1:exon

position:28437:1
position: 28437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28540:1
position: 28540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:28874-29177:1:exon

position:28874:1
position: 28874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102148909
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC102148909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ral guanine nucleotide dissociation stimulator
translation: MIFSYLELLHDETDYYVEGNVLSCRNEEFKFIKDIEMVQKAANLYTVQPNEHFGAWFQAVEPLSEEASYSLSCQLEPRYQWARKIRLFFKDKKSHSSSRPGLNTRPPKKSPAVVADDAPETS
SIO_010081: LOC102148909
subclass of: SO_0000673
so part of: LOC102148909
location: join(27082..27135,27712..27738,28110..28231,28437..28540,28874..28935)
location: region:27082-28935:1
so has part: feature:27082-27135:1:exon
so has part: feature:27712-27738:1:exon
so has part: feature:28110-28231:1:exon
so has part: feature:28437-28540:1:exon
so has part: feature:28874-28935:1:exon

XP_023488699.1
type: Protein
SIO_000068: ncbiprotein

position:27082:1
position: 27082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:28935:1
position: 28935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27082-27135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:27712-27738:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:28110-28231:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28437-28540:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:28874-28935:1:exon

LOC100051214
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100051214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 195433..196840
location: region:195433-196840:1
so has part: feature:195433-196840:1:exon
subclass of: SO_0000010

100051214
type: Gene
SIO_000068: ncbigene

position:195433:1
position: 195433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196840:1
position: 196840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195433-196840:1:exon

LOC100051214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC100051214
product: olfactory receptor 6F1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_001488054.3
SIO_010081: LOC100051214
subclass of: SO_0000673
so part of: LOC100051214
location: 195433..196840
location: region:195433-196840:1
so has part: feature:195433-196840:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:195433-196840:1:exon

LOC100051214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC100051214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 6F1
translation: MSMGTNNETLPHDFLLLGFPGSQALQLFLVMFFLVMYILTVSGNMTILMLVSTSHQLHTPMYFFLSNLSFLEIWYTTAAVPKALAILVGGCQIISFTSCLLQMYLVFSLGCTEYFLLAAMAYDRYLAICYPLHYGVIMNSLLSAQLALASWVCGFLAIAVPTALISNLTFCGPHTINHFFCDIAPWIALACTSTRGVELVAFVIAFVVILSSCLITLVSYIYIISTILRIPSASGRSKAFSTCSSHLAVVLIWYGSTIFLHVRTSIKEALDLTKAVHVLNTVVTPVLNPFIYTLRNKEVRETLLKKWKGK
SIO_010081: LOC100051214
subclass of: SO_0000673
so part of: LOC100051214
location: 195515..196447
location: region:195515-196447:1
so has part: feature:195515-196447:1:exon

XP_001488104.3
type: Protein
SIO_000068: ncbiprotein

position:195515:1
position: 195515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:196447:1
position: 196447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:195515-196447:1:exon

LOC100146311
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100146311
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 202451..212203
location: region:202451-212203:1
so has part: feature:202451-212203:1:exon

100146311
type: Gene
SIO_000068: ncbigene

position:202451:1
position: 202451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:212203:1
position: 212203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202451-212203:1:exon

LOC100146311
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100146311
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC100146311
subclass of: SO_0000673
so part of: LOC100146311
location: 202451..202458
location: region:202451-202458:1
so has part: feature:202451-202458:1:exon

position:202458:1
position: 202458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:202451-202458:1:exon

LOC100146311
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100146311
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC100146311
subclass of: SO_0000673
so part of: LOC100146311
location: 209477..209898
location: region:209477-209898:1
so has part: feature:209477-209898:1:exon

position:209477:1
position: 209477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:209898:1
position: 209898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209477-209898:1:exon

LOC100146311
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100146311
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC100146311
subclass of: SO_0000673
so part of: LOC100146311
location: 210016..210121
location: region:210016-210121:1
so has part: feature:210016-210121:1:exon

position:210016:1
position: 210016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210121:1
position: 210121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210016-210121:1:exon

LOC100146311
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100146311
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC100146311
subclass of: SO_0000673
so part of: LOC100146311
location: 210380..212203
location: region:210380-212203:1
so has part: feature:210380-212203:1:exon

position:210380:1
position: 210380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210380-212203:1:exon

LOC100051359
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100051359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(242943..243887)
location: region:242943-243887:-1
so has part: feature:242943-243887:-1:exon
subclass of: SO_0000010

100051359
type: Gene
SIO_000068: ncbigene

position:242943:-1
position: 242943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243887:-1
position: 243887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:242943-243887:-1:exon

LOC100051359
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC100051359
product: olfactory receptor 2T33-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 38% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_014738174.1
SIO_010081: LOC100051359
subclass of: SO_0000673
so part of: LOC100051359
location: complement(242943..243887)
location: region:242943-243887:-1
so has part: feature:242943-243887:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:242943-243887:-1:exon

LOC100051359
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC100051359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 2T33-like
translation: MEKRNTTSDFILLGLFKHTGSHLFLFMVVLTMAIASFVGNALMLLLIYWELWLHTPMYFLLSQLSLMDVMLVSTIVPKMAADYLTGKKSISPAGCGLQIFVSLTLGGGECFLLAAMSYDRYVAVCHPLRYPVLMGWQLCLRMTLGSWFLGAADGLMQAAATLSFPFCSAHEIDHFFCEAPMLVRLACADTSVFENIMYICCVLMLLVPFSLILTSYSFILSAVLQMRSREARQKAFATCSSHLAVVGLFYGAAIFIYMRPKSYRSANRDKVVSAFYTIFTPLLNPLIYSLRNSEVKGALKMWWGKCVNLKCQQT
SIO_010081: LOC100051359
subclass of: SO_0000673
so part of: LOC100051359
location: complement(242943..243887)
location: region:242943-243887:-1
so has part: feature:242943-243887:-1:exon

XP_014593660.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:242943-243887:-1:exon

LOC100051428
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100051428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(260338..261793)
location: region:260338-261793:-1
so has part: feature:260338-261793:-1:exon
subclass of: SO_0000010

100051428
type: Gene
SIO_000068: ncbigene

position:260338:-1
position: 260338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:261793:-1
position: 261793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260338-261793:-1:exon

LOC100051428
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC100051428
product: olfactory receptor 2W3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_001488105.3
SIO_010081: LOC100051428
subclass of: SO_0000673
so part of: LOC100051428
location: complement(260338..261793)
location: region:260338-261793:-1
so has part: feature:260338-261793:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:260338-261793:-1:exon

LOC100051428
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC100051428
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 2W3
translation: MDGTNGSTQGNFILLGFSDRPHLERILFVVILIAYLLTLVGNTIIILVSRLDFHLHTPMYFFLTHLSFLDLSFTTSSIPQLLYNLSGGDKTISYTGCAIQLFLFLGLGGVECLLLAVMAYNRFVAVCKPLHYMVIMNPCLCMALVSVAWGCGMANSLAMSPVTLLLPRCGNHHVDHFLCEMPALIRMACVNTAAIEGTVFVLAVGIVLSPLVFILASYGYIMRAVLQIQSVSGRQKAFNTSGSHLTVVSLFYGNIIYMYMQPGNSSSQDQGKFLTLFYNIITPLLNPLIYTLRNKEVKGALRRLLLGDREVGKK
SIO_010081: LOC100051428
subclass of: SO_0000673
so part of: LOC100051428
location: complement(260338..261282)
location: region:260338-261282:-1
so has part: feature:260338-261282:-1:exon

XP_001488155.2
type: Protein
SIO_000068: ncbiprotein

position:261282:-1
position: 261282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:260338-261282:-1:exon

LOC100051498
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100051498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279045..280007
location: region:279045-280007:1
so has part: feature:279045-280007:1:exon
subclass of: SO_0000010

100051498
type: Gene
SIO_000068: ncbigene

position:279045:1
position: 279045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:280007:1
position: 280007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279045-280007:1:exon

LOC100051498
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC100051498
product: olfactory receptor 2T29-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
transcript id: XM_001488116.5
SIO_010081: LOC100051498
subclass of: SO_0000673
so part of: LOC100051498
location: 279045..280007
location: region:279045-280007:1
so has part: feature:279045-280007:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279045-280007:1:exon

LOC100051498
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC100051498
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 2T29-like
translation: MDNTMWVTNNTGWSDFILVGLFSQSKHPALLCVVIFVVFLMTLFGNTILILLIYSDAHLNTPMYFFISQLSLMDMMYISVTVPKMLMDQVMGVNKISAPECGVQMFLYLTLVGSEFFLLAAMAYDRYVAICHPLHYPILMNHRMCLLLVSGCWFLGSVDGFMLTPVTMTFPFCRSQEIHHFFCEVPALMKLSCSDTSLYETLMYLCCVLMLLIPVIVISSSYSFILLTIYKMNSAEGRKKAFTTCASHMTVVILFYGAAVYTYMLPSSYHTPEKDMIVSVFYTILTPVLNPIIYSLRNKDVTGALKKMLNVESVFQETIK
SIO_010081: LOC100051498
subclass of: SO_0000673
so part of: LOC100051498
location: 279045..280007
location: region:279045-280007:1
so has part: feature:279045-280007:1:exon

XP_001488166.5
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279045-280007:1:exon

LOC100051570
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100051570
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(290427..291365)
location: region:290427-291365:-1
so has part: feature:290427-291365:-1:exon

100051570
type: Gene
SIO_000068: ncbigene

position:290427:-1
position: 290427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291365:-1
position: 291365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:290427-291365:-1:exon

LOC100051570
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100051570
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC100051570
subclass of: SO_0000673
so part of: LOC100051570
location: complement(290427..291365)
location: region:290427-291365:-1
so has part: feature:290427-291365:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:290427-291365:-1:exon

LOC100051641
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100051641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(318222..319217)
location: region:318222-319217:-1
so has part: feature:318222-319217:-1:exon
subclass of: SO_0000010

100051641
type: Gene
SIO_000068: ncbigene

position:318222:-1
position: 318222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:319217:-1
position: 319217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318222-319217:-1:exon

LOC100051641
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC100051641
product: olfactory receptor 2T8-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
transcript id: XM_001488152.2
SIO_010081: LOC100051641
subclass of: SO_0000673
so part of: LOC100051641
location: complement(318222..319217)
location: region:318222-319217:-1
so has part: feature:318222-319217:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318222-319217:-1:exon

LOC100051641
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC100051641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 2T8-like
translation: MVKILSSIYPFAVLLFFEILENGNTTSGFILLGLFNHTEAHPFLFVMVLTIAFTSLLGNALMLLLIHQEPHLRTAMYFLLSQLSLMDMMLVSTIVPKMAADYLTGKKSISPAGCGLQIFFLLTLGGGECFLLAAMSYDRYVAVCHPLQYPVLMSPQLCLRMTLGSWFLGAADGLMQAATTLSFPFCSAHEIDHFFCEAPTVVRLACADISVFEYVMYICCVLMLLVPLSLILTSYSLILTAVLQKRSREACKKAFATCSSHLAVVGLFYGAAIFTYMRPKSYRSANHDKVVSAFYTIFTPVLNPLIYSLRNREVKGALRKCMGQWAALSHN
SIO_010081: LOC100051641
subclass of: SO_0000673
so part of: LOC100051641
location: complement(318222..319217)
location: region:318222-319217:-1
so has part: feature:318222-319217:-1:exon

XP_001488202.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318222-319217:-1:exon

LOC100051713
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100051713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(327061..331104)
location: region:327061-331104:-1
so has part: feature:327061-331104:-1:exon

100051713
type: Gene
SIO_000068: ncbigene

position:327061:-1
position: 327061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:331104:-1
position: 331104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327061-331104:-1:exon

LOC100051713
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100051713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100051713
subclass of: SO_0000673
so part of: LOC100051713
location: complement(327061..328005)
location: region:327061-328005:-1
so has part: feature:327061-328005:-1:exon

position:328005:-1
position: 328005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327061-328005:-1:exon

LOC100051713
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100051713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100051713
subclass of: SO_0000673
so part of: LOC100051713
location: complement(330426..330552)
location: region:330426-330552:-1
so has part: feature:330426-330552:-1:exon

position:330426:-1
position: 330426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:330552:-1
position: 330552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330426-330552:-1:exon

LOC100051713
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100051713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100051713
subclass of: SO_0000673
so part of: LOC100051713
location: complement(330912..331104)
location: region:330912-331104:-1
so has part: feature:330912-331104:-1:exon

position:330912:-1
position: 330912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330912-331104:-1:exon

LOC100147496
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100147496
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(331935..332894)
location: region:331935-332894:-1
so has part: feature:331935-332894:-1:exon
subclass of: SO_0000010

100147496
type: Gene
SIO_000068: ncbigene

position:331935:-1
position: 331935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332894:-1
position: 332894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:331935-332894:-1:exon

LOC100147496
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC100147496
product: olfactory receptor 5F1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_014738173.1
SIO_010081: LOC100147496
subclass of: SO_0000673
so part of: LOC100147496
location: complement(331935..332894)
location: region:331935-332894:-1
so has part: feature:331935-332894:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:331935-332894:-1:exon

LOC100147496
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC100147496
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(332595..332597),aa:OTHER)
product: LOW QUALITY PROTEIN: olfactory receptor 5F1-like
translation: MDAINRTTVTEFIFPGFSGVLSLRLTLFVMFLAVYLLSLMGNTPIIFIVVMDSTLQTPMCIFLGNLSFLELWHTTVTVPNLLATCLSQVVTISVAGCITXYYFFFSMGATECILLAVMAYDWYLAICSPLHCSLLMSIRVCLWFSAGSWIGGFIAPILSTIVISHQNFCGPQKINHFFCDSDPIYKLSCSDTYLAESLSYTCSSIVILSSFLLTMSSYVHVVVTITRLSSREAWKKTFSTCTSHLTVVTIYYGTIIFAYVRPPAKYNFTIGKVVSVFYCVVTPLVNPLIYTLRNKDVKKAFRKVLAQKRWLLTRNMRAI
SIO_010081: LOC100147496
subclass of: SO_0000673
so part of: LOC100147496
location: complement(331935..332894)
location: region:331935-332894:-1
so has part: feature:331935-332894:-1:exon

XP_014593659.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:331935-332894:-1:exon

LOC100146200
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100146200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 341220..342188
location: region:341220-342188:1
so has part: feature:341220-342188:1:exon
subclass of: SO_0000010

100146200
type: Gene
SIO_000068: ncbigene

position:341220:1
position: 341220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:342188:1
position: 342188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:341220-342188:1:exon

LOC100146200
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: LOC100146200
product: olfactory receptor 7A17-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_001915266.1
SIO_010081: LOC100146200
subclass of: SO_0000673
so part of: LOC100146200
location: 341220..342188
location: region:341220-342188:1
so has part: feature:341220-342188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:341220-342188:1:exon

LOC100146200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: LOC100146200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 7A17-like
translation: MVPGNGTQNSEFLLLGLSKEQELEPLIFGLFIFMYLATILGNLLIILATVSDSHLHTPMYFFLSNLSFVDICFTSTTIPKMLVNIQTQSKVITYKGCISQMYFYILFAVLDDFHLAVMAYDRFLAICHPLSYTVMMSPQLCKLLVLISWLISALHSLLESLMVLRLSFCTDLEIPHFFCEIKQVIRLACSDYSLSDTVMYVTAVLLAGGALAGILYSYSKLVSSICGIPSAQGKYKAFSTCVSHLSVVSLYYFSSLGVYLLPAPTHSSRSSAAASVMYTVVTPMLNPFVYSLRNKDIQRALKRVVQMVCIKKKIVLGLKKCP
SIO_010081: LOC100146200
subclass of: SO_0000673
so part of: LOC100146200
location: 341220..342188
location: region:341220-342188:1
so has part: feature:341220-342188:1:exon

XP_001915301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:341220-342188:1:exon

PDCD2
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: PDCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 355168..360408
location: region:355168-360408:1
so has part: feature:355168-360408:1:exon
subclass of: SO_0000010

100051773
type: Gene
SIO_000068: ncbigene

position:355168:1
position: 355168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:360408:1
position: 360408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355168-360408:1:exon

PDCD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: PDCD2
product: programmed cell death 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_005614884.3
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: join(355168..355494,355978..356220,356575..356706,357256..357359,358505..358618,359803..360408)
location: region:355168-360408:1
so has part: feature:355168-355494:1:exon
so has part: feature:355978-356220:1:exon
so has part: feature:356575-356706:1:exon
so has part: feature:357256-357359:1:exon
so has part: feature:358505-358618:1:exon
so has part: feature:359803-360408:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:355168-355494:1:exon

position:355494:1
position: 355494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:355978-356220:1:exon

position:355978:1
position: 355978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356220:1
position: 356220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:356575-356706:1:exon

position:356575:1
position: 356575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:356706:1
position: 356706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:357256-357359:1:exon

position:357256:1
position: 357256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:357359:1
position: 357359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:358505-358618:1:exon

position:358505:1
position: 358505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358618:1
position: 358618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:359803-360408:1:exon

position:359803:1
position: 359803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDCD2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: PDCD2
product: programmed cell death 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 80 samples with support for all annotated introns
transcript id: XM_023633090.1
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: join(355168..355494,355978..356220,356575..356706,357256..357359,358466..358600)
location: region:355168-358600:1
so has part: feature:355168-355494:1:exon
so has part: feature:355978-356220:1:exon
so has part: feature:356575-356706:1:exon
so has part: feature:357256-357359:1:exon
so has part: feature:358466-358600:1:exon

position:358600:1
position: 358600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355168-355494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355978-356220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356575-356706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357256-357359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358466-358600:1:exon

position:358466:1
position: 358466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PDCD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: PDCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 2 isoform X1
translation: MAAACAGSVELGFAEEAPAWRLRSEQFPSKVGGRPAWLSAAGLPGPAELSCALCGRPLAFLLQLYAPLPGRADAFHRGLFLFCCRAPPCCAGLRVFRNQLPRKNDFYSYEPPSEEPPAATGDPVCLQLKSGARLCRVCGCLGPKTCSRCHRAHYCSKEHQTLDWRSGHKQACTQADNLDNTVPDHNFLFPEFEIVIETEDEITPEVVEKEEESEIIGSMGEAPEEELDSMAKHESREDKVFQKFKTKVALEPEQILRYGRGTAPIWISAENIPQEEDVPDCPCGAKRIFEFQVMPQLLNYLKADRLGRSVDWGVLAVFTCAESCRLGTGYAEEFVWKQDITDTP
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: join(355212..355494,355978..356220,356575..356706,357256..357359,358505..358618,359803..359961)
location: region:355212-359961:1
so has part: feature:355212-355494:1:exon
so has part: feature:355978-356220:1:exon
so has part: feature:356575-356706:1:exon
so has part: feature:357256-357359:1:exon
so has part: feature:358505-358618:1:exon
so has part: feature:359803-359961:1:exon

XP_005614941.2
type: Protein
SIO_000068: ncbiprotein

position:355212:1
position: 355212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:359961:1
position: 359961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355212-355494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355978-356220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356575-356706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357256-357359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358505-358618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:359803-359961:1:exon

PDCD2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: PDCD2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: programmed cell death protein 2 isoform X2
translation: MAAACAGSVELGFAEEAPAWRLRSEQFPSKVGGRPAWLSAAGLPGPAELSCALCGRPLAFLLQLYAPLPGRADAFHRGLFLFCCRAPPCCAGLRVFRNQLPRKNDFYSYEPPSEEPPAATGDPVCLQLKSGARLCRVCGCLGPKTCSRCHRAHYCSKEHQTLDWRSGHKQACTQADNLDNTVPDHNFLFPEFEIVIETEDEITPEVVEKEEESEIIGSMGEAPEEELDSMAKHESREDKVFQKFKTKVALEPEQVRS
SIO_010081: PDCD2
subclass of: SO_0000673
so part of: PDCD2
location: join(355212..355494,355978..356220,356575..356706,357256..357359,358466..358477)
location: region:355212-358477:1
so has part: feature:355212-355494:1:exon
so has part: feature:355978-356220:1:exon
so has part: feature:356575-356706:1:exon
so has part: feature:357256-357359:1:exon
so has part: feature:358466-358477:1:exon

XP_023488858.1
type: Protein
SIO_000068: ncbiprotein

position:358477:1
position: 358477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:355212-355494:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:355978-356220:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:356575-356706:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357256-357359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:358466-358477:1:exon

TBP
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: TBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(364268..388293)
location: region:364268-388293:-1
so has part: feature:364268-388293:-1:exon
subclass of: SO_0000010

100049846
type: Gene
SIO_000068: ncbigene

position:364268:-1
position: 364268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388293:-1
position: 388293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364268-388293:-1:exon

TBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: TBP
product: TATA-box binding protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 114 samples with support for all annotated introns
transcript id: XM_001499329.4
SIO_010081: TBP
subclass of: SO_0000673
so part of: TBP
location: complement(join(364268..365023,365709..365803,366987..367154,369003..369094,374553..374640,381901..382313,385025..385228,385362..385414,388138..388293))
location: region:364268-388293:-1
so has part: feature:388138-388293:-1:exon
so has part: feature:385362-385414:-1:exon
so has part: feature:385025-385228:-1:exon
so has part: feature:381901-382313:-1:exon
so has part: feature:374553-374640:-1:exon
so has part: feature:369003-369094:-1:exon
so has part: feature:366987-367154:-1:exon
so has part: feature:365709-365803:-1:exon
so has part: feature:364268-365023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388138-388293:-1:exon

position:388138:-1
position: 388138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385362-385414:-1:exon

position:385362:-1
position: 385362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385414:-1
position: 385414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385025-385228:-1:exon

position:385025:-1
position: 385025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385228:-1
position: 385228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381901-382313:-1:exon

position:381901:-1
position: 381901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:382313:-1
position: 382313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:374553-374640:-1:exon

position:374553:-1
position: 374553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374640:-1
position: 374640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:369003-369094:-1:exon

position:369003:-1
position: 369003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369094:-1
position: 369094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:366987-367154:-1:exon

position:366987:-1
position: 366987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:367154:-1
position: 367154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:365709-365803:-1:exon

position:365709:-1
position: 365709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:365803:-1
position: 365803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:364268-365023:-1:exon

position:365023:-1
position: 365023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: TBP
product: TATA-box binding protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_014738168.2
SIO_010081: TBP
subclass of: SO_0000673
so part of: TBP
location: complement(join(364268..365023,365709..365803,366987..367154,369003..369094,374553..374640,381901..382313,385025..385232,385362..385414,388138..388293))
location: region:364268-388293:-1
so has part: feature:388138-388293:-1:exon
so has part: feature:385362-385414:-1:exon
so has part: feature:385025-385232:-1:exon
so has part: feature:381901-382313:-1:exon
so has part: feature:374553-374640:-1:exon
so has part: feature:369003-369094:-1:exon
so has part: feature:366987-367154:-1:exon
so has part: feature:365709-365803:-1:exon
so has part: feature:364268-365023:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:388138-388293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385362-385414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385025-385232:-1:exon

position:385232:-1
position: 385232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:381901-382313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374553-374640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369003-369094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366987-367154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365709-365803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:364268-365023:-1:exon

TBP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: TBP
product: TATA-box binding protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_023633091.1
SIO_010081: TBP
subclass of: SO_0000673
so part of: TBP
location: complement(join(364268..365023,365709..365803,366987..367154,369003..369094,374553..374640,381901..382313,385025..385232,385362..385414,387662..387780))
location: region:364268-387780:-1
so has part: feature:387662-387780:-1:exon
so has part: feature:385362-385414:-1:exon
so has part: feature:385025-385232:-1:exon
so has part: feature:381901-382313:-1:exon
so has part: feature:374553-374640:-1:exon
so has part: feature:369003-369094:-1:exon
so has part: feature:366987-367154:-1:exon
so has part: feature:365709-365803:-1:exon
so has part: feature:364268-365023:-1:exon

position:387780:-1
position: 387780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:387662-387780:-1:exon

position:387662:-1
position: 387662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385362-385414:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385025-385232:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:381901-382313:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:374553-374640:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:369003-369094:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:366987-367154:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:365709-365803:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:364268-365023:-1:exon

TBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: TBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA-box-binding protein
translation: MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAAVQQSTSQQATQGASGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
SIO_010081: TBP
subclass of: SO_0000673
so part of: TBP
location: complement(join(364944..365023,365709..365803,366987..367154,369003..369094,374553..374640,381901..382313,385025..385078))
location: region:364944-385078:-1
so has part: feature:385025-385078:-1:exon
so has part: feature:381901-382313:-1:exon
so has part: feature:374553-374640:-1:exon
so has part: feature:369003-369094:-1:exon
so has part: feature:366987-367154:-1:exon
so has part: feature:365709-365803:-1:exon
so has part: feature:364944-365023:-1:exon

XP_023488859.1
type: Protein
SIO_000068: ncbiprotein

position:364944:-1
position: 364944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385078:-1
position: 385078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385025-385078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381901-382313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374553-374640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369003-369094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:366987-367154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365709-365803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:364944-365023:-1:exon

TBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: TBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA-box-binding protein
translation: MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAAVQQSTSQQATQGASGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
SIO_010081: TBP
subclass of: SO_0000673
so part of: TBP
location: complement(join(364944..365023,365709..365803,366987..367154,369003..369094,374553..374640,381901..382313,385025..385078))
location: region:364944-385078:-1
so has part: feature:385025-385078:-1:exon
so has part: feature:381901-382313:-1:exon
so has part: feature:374553-374640:-1:exon
so has part: feature:369003-369094:-1:exon
so has part: feature:366987-367154:-1:exon
so has part: feature:365709-365803:-1:exon
so has part: feature:364944-365023:-1:exon

XP_001499379.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385025-385078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381901-382313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374553-374640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369003-369094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:366987-367154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365709-365803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:364944-365023:-1:exon

TBP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: TBP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: TATA-box-binding protein
translation: MDQNNSLPPYAQGLASPQGAMTPGIPIFSPMMPYGTGLTPQPIQNTNSLSILEEQQRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAAVQQSTSQQATQGASGQTPQLFHSQTLTTAPLPGTTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKGFRKTT
SIO_010081: TBP
subclass of: SO_0000673
so part of: TBP
location: complement(join(364944..365023,365709..365803,366987..367154,369003..369094,374553..374640,381901..382313,385025..385078))
location: region:364944-385078:-1
so has part: feature:385025-385078:-1:exon
so has part: feature:381901-382313:-1:exon
so has part: feature:374553-374640:-1:exon
so has part: feature:369003-369094:-1:exon
so has part: feature:366987-367154:-1:exon
so has part: feature:365709-365803:-1:exon
so has part: feature:364944-365023:-1:exon

XP_014593654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:385025-385078:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:381901-382313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:374553-374640:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:369003-369094:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:366987-367154:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:365709-365803:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:364944-365023:-1:exon

PSMB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: PSMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 389904..403672
location: region:389904-403672:1
so has part: feature:389904-403672:1:exon
subclass of: SO_0000010

100051957
type: Gene
SIO_000068: ncbigene

position:389904:1
position: 389904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403672:1
position: 403672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389904-403672:1:exon

PSMB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: PSMB1
product: proteasome subunit beta 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 180 samples with support for all annotated introns
transcript id: XM_001499372.5
SIO_010081: PSMB1
subclass of: SO_0000673
so part of: PSMB1
location: join(389904..390075,393363..393470,394725..394806,397312..397441,402251..402357,403382..403672)
location: region:389904-403672:1
so has part: feature:389904-390075:1:exon
so has part: feature:393363-393470:1:exon
so has part: feature:394725-394806:1:exon
so has part: feature:397312-397441:1:exon
so has part: feature:402251-402357:1:exon
so has part: feature:403382-403672:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:389904-390075:1:exon

position:390075:1
position: 390075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:393363-393470:1:exon

position:393363:1
position: 393363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:393470:1
position: 393470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:394725-394806:1:exon

position:394725:1
position: 394725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:394806:1
position: 394806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:397312-397441:1:exon

position:397312:1
position: 397312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397441:1
position: 397441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:402251-402357:1:exon

position:402251:1
position: 402251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:402357:1
position: 402357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:403382-403672:1:exon

position:403382:1
position: 403382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PSMB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: PSMB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome subunit beta type-1
translation: MLSSAARLPCSGRDPALEPHGAAGPVQLRFSPYAFNGGTILAIAGEDFSIVASDTRLSEGYSIHTRDSPKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMGLVKDVFISAAERDVYTGDALRICIVTKEGIREETVPLRKD
SIO_010081: PSMB1
subclass of: SO_0000673
so part of: PSMB1
location: join(389963..390075,393363..393470,394725..394806,397312..397441,402251..402357,403382..403567)
location: region:389963-403567:1
so has part: feature:389963-390075:1:exon
so has part: feature:393363-393470:1:exon
so has part: feature:394725-394806:1:exon
so has part: feature:397312-397441:1:exon
so has part: feature:402251-402357:1:exon
so has part: feature:403382-403567:1:exon

XP_001499422.1
type: Protein
SIO_000068: ncbiprotein

position:389963:1
position: 389963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:403567:1
position: 403567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:389963-390075:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:393363-393470:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:394725-394806:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:397312-397441:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:402251-402357:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:403382-403567:1:exon

FAM120B
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: FAM120B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(479033..576082)
location: region:479033-576082:-1
so has part: feature:479033-576082:-1:exon
subclass of: SO_0000010

100052825
type: Gene
SIO_000068: ncbigene

position:479033:-1
position: 479033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576082:-1
position: 576082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479033-576082:-1:exon

FAM120B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FAM120B
product: family with sequence similarity 120B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_023633006.1
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: complement(join(479033..482989,487646..487697,498120..498212,501983..502091,503470..503676,525120..525212,529183..529355,536869..536970,544700..544880,549317..550775,576017..576082))
location: region:479033-576082:-1
so has part: feature:576017-576082:-1:exon
so has part: feature:549317-550775:-1:exon
so has part: feature:544700-544880:-1:exon
so has part: feature:536869-536970:-1:exon
so has part: feature:529183-529355:-1:exon
so has part: feature:525120-525212:-1:exon
so has part: feature:503470-503676:-1:exon
so has part: feature:501983-502091:-1:exon
so has part: feature:498120-498212:-1:exon
so has part: feature:487646-487697:-1:exon
so has part: feature:479033-482989:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576017-576082:-1:exon

position:576017:-1
position: 576017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:549317-550775:-1:exon

position:549317:-1
position: 549317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550775:-1
position: 550775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:544700-544880:-1:exon

position:544700:-1
position: 544700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:544880:-1
position: 544880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:536869-536970:-1:exon

position:536869:-1
position: 536869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:536970:-1
position: 536970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:529183-529355:-1:exon

position:529183:-1
position: 529183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:529355:-1
position: 529355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:525120-525212:-1:exon

position:525120:-1
position: 525120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:525212:-1
position: 525212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:503470-503676:-1:exon

position:503470:-1
position: 503470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503676:-1
position: 503676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:501983-502091:-1:exon

position:501983:-1
position: 501983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:502091:-1
position: 502091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:498120-498212:-1:exon

position:498120:-1
position: 498120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:498212:-1
position: 498212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:487646-487697:-1:exon

position:487646:-1
position: 487646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487697:-1
position: 487697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:479033-482989:-1:exon

position:482989:-1
position: 482989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FAM120B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FAM120B
product: family with sequence similarity 120B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 147 samples with support for all annotated introns
transcript id: XM_005608159.3
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: complement(join(479033..482989,487646..487697,498120..498212,501983..502091,503470..503676,525120..525212,529183..529355,536869..536970,544700..544880,549317..550775,562799..562909))
location: region:479033-562909:-1
so has part: feature:562799-562909:-1:exon
so has part: feature:549317-550775:-1:exon
so has part: feature:544700-544880:-1:exon
so has part: feature:536869-536970:-1:exon
so has part: feature:529183-529355:-1:exon
so has part: feature:525120-525212:-1:exon
so has part: feature:503470-503676:-1:exon
so has part: feature:501983-502091:-1:exon
so has part: feature:498120-498212:-1:exon
so has part: feature:487646-487697:-1:exon
so has part: feature:479033-482989:-1:exon

position:562909:-1
position: 562909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:562799-562909:-1:exon

position:562799:-1
position: 562799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:549317-550775:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:544700-544880:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536869-536970:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:529183-529355:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:525120-525212:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:503470-503676:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:501983-502091:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498120-498212:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:487646-487697:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:479033-482989:-1:exon

FAM120B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FAM120B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of peroxisome proliferator-activated receptor gamma
translation: MGVRGLQGFVGSTCPHICTVVNFKELAENHRSKHPGCTPTIVVDAMCCLRYWYTPESWICGGQWREYFSALREFVTTFTTVGIKLIFFFDGMVEQHKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFFIPSGLAIFTRFALKTLGQETLCSLREADYEVASYGLQNNCLGILGEDTDYLIYDTSPYFSISELCLESLNTIMLCREKLCESLNLKLADLPLLACLLGNDIIPEGMFESFRYKCLSSYTSAKENFDKKGNIILAVADHISKVLHLHQGEKKLEEMLPLGPNKALFYKGVASYLLPGQKSPWFFQKPKDVITLDKQVVSMCTDPESKQEVLMCTDPEYKQEVSMCTHPESKQGVPMCTDPESKQEVPMCTDPESKQEVPMCTDPESKKGTPIYTHPESKHEVPMCADPELKQEVPMCTHPEIKQKLPIGTDPEFKLESPMCTNPGIKQEDPMNLEPEIKQQVTMVSDPEILKVAQAQHVQGESYLVYNIMSSGEIECSNTLEDALDQALPSQAFAYRPVRQRVYALLLGDGRDDSSSCPTVKEWFVYSGNPLKHPDLVRPLPMNLAGGTPSLKLLWLNQEPEIQARRLDTLLACFDLSSSREELQAVENPFKALCCLLIYLFVQVDTLCLEDLHAFIAQALCLQGKSTLQLADLQLDYVDPRAVQLGSLLVRGLTTLVLVNSACGFPWRMSDFMPWNVFDGKLFHQKYLLSEKGYAVEVLLEQNRSQLTRFHNLKSVVCKACMKENRRIVSRQHGRSHHSGRWGREGSGSHRTSSGHSRSGQGQHWRDQGPGSRPREPDQWRRCSSSSGWSN
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: complement(join(482977..482989,487646..487697,498120..498212,501983..502091,503470..503676,525120..525212,529183..529355,536869..536970,544700..544880,549317..550765))
location: region:482977-550765:-1
so has part: feature:549317-550765:-1:exon
so has part: feature:544700-544880:-1:exon
so has part: feature:536869-536970:-1:exon
so has part: feature:529183-529355:-1:exon
so has part: feature:525120-525212:-1:exon
so has part: feature:503470-503676:-1:exon
so has part: feature:501983-502091:-1:exon
so has part: feature:498120-498212:-1:exon
so has part: feature:487646-487697:-1:exon
so has part: feature:482977-482989:-1:exon

XP_023488774.1
type: Protein
SIO_000068: ncbiprotein

position:482977:-1
position: 482977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550765:-1
position: 550765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549317-550765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544700-544880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536869-536970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529183-529355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525120-525212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503470-503676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501983-502091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498120-498212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487646-487697:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482977-482989:-1:exon

FAM120B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FAM120B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: constitutive coactivator of peroxisome proliferator-activated receptor gamma
translation: MGVRGLQGFVGSTCPHICTVVNFKELAENHRSKHPGCTPTIVVDAMCCLRYWYTPESWICGGQWREYFSALREFVTTFTTVGIKLIFFFDGMVEQHKRDEWVKRRLKNNREISRIFHYIKSHKEQPGRNMFFIPSGLAIFTRFALKTLGQETLCSLREADYEVASYGLQNNCLGILGEDTDYLIYDTSPYFSISELCLESLNTIMLCREKLCESLNLKLADLPLLACLLGNDIIPEGMFESFRYKCLSSYTSAKENFDKKGNIILAVADHISKVLHLHQGEKKLEEMLPLGPNKALFYKGVASYLLPGQKSPWFFQKPKDVITLDKQVVSMCTDPESKQEVLMCTDPEYKQEVSMCTHPESKQGVPMCTDPESKQEVPMCTDPESKQEVPMCTDPESKKGTPIYTHPESKHEVPMCADPELKQEVPMCTHPEIKQKLPIGTDPEFKLESPMCTNPGIKQEDPMNLEPEIKQQVTMVSDPEILKVAQAQHVQGESYLVYNIMSSGEIECSNTLEDALDQALPSQAFAYRPVRQRVYALLLGDGRDDSSSCPTVKEWFVYSGNPLKHPDLVRPLPMNLAGGTPSLKLLWLNQEPEIQARRLDTLLACFDLSSSREELQAVENPFKALCCLLIYLFVQVDTLCLEDLHAFIAQALCLQGKSTLQLADLQLDYVDPRAVQLGSLLVRGLTTLVLVNSACGFPWRMSDFMPWNVFDGKLFHQKYLLSEKGYAVEVLLEQNRSQLTRFHNLKSVVCKACMKENRRIVSRQHGRSHHSGRWGREGSGSHRTSSGHSRSGQGQHWRDQGPGSRPREPDQWRRCSSSSGWSN
SIO_010081: FAM120B
subclass of: SO_0000673
so part of: FAM120B
location: complement(join(482977..482989,487646..487697,498120..498212,501983..502091,503470..503676,525120..525212,529183..529355,536869..536970,544700..544880,549317..550765))
location: region:482977-550765:-1
so has part: feature:549317-550765:-1:exon
so has part: feature:544700-544880:-1:exon
so has part: feature:536869-536970:-1:exon
so has part: feature:529183-529355:-1:exon
so has part: feature:525120-525212:-1:exon
so has part: feature:503470-503676:-1:exon
so has part: feature:501983-502091:-1:exon
so has part: feature:498120-498212:-1:exon
so has part: feature:487646-487697:-1:exon
so has part: feature:482977-482989:-1:exon

XP_005608216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:549317-550765:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:544700-544880:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:536869-536970:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:529183-529355:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:525120-525212:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:503470-503676:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501983-502091:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:498120-498212:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:487646-487697:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:482977-482989:-1:exon

DLL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: DLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 576087..584631
location: region:576087-584631:1
so has part: feature:576087-584631:1:exon
subclass of: SO_0000010

100052876
type: Gene
SIO_000068: ncbigene

position:576087:1
position: 576087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:584631:1
position: 584631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576087-584631:1:exon

DLL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: DLL1
product: delta like canonical Notch ligand 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_023633007.1
SIO_010081: DLL1
subclass of: SO_0000673
so part of: DLL1
location: join(576087..576392,576702..576998,577734..577794,578001..578258,580207..580267,580798..580928,581030..581199,581314..581530,582716..583517,583698..583815,583936..584631)
location: region:576087-584631:1
so has part: feature:576087-576392:1:exon
so has part: feature:576702-576998:1:exon
so has part: feature:577734-577794:1:exon
so has part: feature:578001-578258:1:exon
so has part: feature:580207-580267:1:exon
so has part: feature:580798-580928:1:exon
so has part: feature:581030-581199:1:exon
so has part: feature:581314-581530:1:exon
so has part: feature:582716-583517:1:exon
so has part: feature:583698-583815:1:exon
so has part: feature:583936-584631:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:576087-576392:1:exon

position:576392:1
position: 576392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576702-576998:1:exon

position:576702:1
position: 576702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:576998:1
position: 576998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:577734-577794:1:exon

position:577734:1
position: 577734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577794:1
position: 577794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:578001-578258:1:exon

position:578001:1
position: 578001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578258:1
position: 578258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:580207-580267:1:exon

position:580207:1
position: 580207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580267:1
position: 580267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:580798-580928:1:exon

position:580798:1
position: 580798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580928:1
position: 580928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:581030-581199:1:exon

position:581030:1
position: 581030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581199:1
position: 581199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:581314-581530:1:exon

position:581314:1
position: 581314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581530:1
position: 581530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:582716-583517:1:exon

position:582716:1
position: 582716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583517:1
position: 583517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:583698-583815:1:exon

position:583698:1
position: 583698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583815:1
position: 583815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:583936-584631:1:exon

position:583936:1
position: 583936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: DLL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: delta-like protein 1
translation: MGRRCALALAVVSALLCQVWSSGVFELKLQEFVNKKGLLGNRNCCRGGAGPPPCACRTFFRVCLKHYQASVSPEPPCTYGSAVTPVLGVDSFSLPDGAGADPAFSNPIRFPFGFTWPGTFSLIIEALHTDSPDDLATENPERLISRLATQRHLTVGEEWSQDLHSSGRTDLKYSYRFVCDEHYYGEGCSVFCRPRDDAFGHFTCGERGEKVCNPGWKGQYCTEPICLPGCDEQHGFCDRPGECKCRVGWQGRYCDQCIRYPGCLHGTCQQPWQCNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTGQGSYTCSCRPGYTGANCQMEIDECGTSPCRNGGSCRDLENSYSCTCPPGFYGRVCELSAMACADGPCFNGGRCSDNPEGGYTCRCPGGFSGFNCEKKMDACTSSPCANGAQCVDLGDAYLCRCQAGFSGRHCDNNVDDCASSPCANGGTCRDGVNEYSCTCPPGYTGRNCSAPVSRCEHAPCHNGATCHERDRRYLCECARGYGGPNCQFLLPEPPPGPVVVDLTEKYVEGQPGPFPWAAVCAGVVLVLMLLLGCAAVVVCVRLRLQKHRPPADPCRGETETMNNLANCQREKDISVSVIGATQVKNTNKKADFHRDHGGAEQDGLKARYPTVDYNLVQDLKGDDTSIRDPHSKRDTKCQPQGSAGEEKGTPTLRGGEASERKRPDSVYSTSKDTKYQSVYVISEEKDECVIATEV
SIO_010081: DLL1
subclass of: SO_0000673
so part of: DLL1
location: join(576339..576392,576702..576998,577734..577794,578001..578258,580207..580267,580798..580928,581030..581199,581314..581530,582716..583517,583698..583815,583936..583941)
location: region:576339-583941:1
so has part: feature:576339-576392:1:exon
so has part: feature:576702-576998:1:exon
so has part: feature:577734-577794:1:exon
so has part: feature:578001-578258:1:exon
so has part: feature:580207-580267:1:exon
so has part: feature:580798-580928:1:exon
so has part: feature:581030-581199:1:exon
so has part: feature:581314-581530:1:exon
so has part: feature:582716-583517:1:exon
so has part: feature:583698-583815:1:exon
so has part: feature:583936-583941:1:exon

XP_023488775.1
type: Protein
SIO_000068: ncbiprotein

position:576339:1
position: 576339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:583941:1
position: 583941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:576339-576392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576702-576998:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:577734-577794:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:578001-578258:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:580207-580267:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:580798-580928:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:581030-581199:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:581314-581530:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:582716-583517:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:583698-583815:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:583936-583941:1:exon

LOC111771424
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC111771424
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(608077..612195)
location: region:608077-612195:-1
so has part: feature:608077-612195:-1:exon
subclass of: SO_0000011

111771424
type: Gene
SIO_000068: ncbigene

position:608077:-1
position: 608077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612195:-1
position: 612195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:608077-612195:-1:exon

LOC111771424
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9796
nc RNA class: lncRNA
gene: LOC111771424
product: uncharacterized LOC111771424
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002805258.1
SIO_010081: LOC111771424
subclass of: SO_0000673
so part of: LOC111771424
location: complement(join(608077..608858,609090..609765,610642..612195))
location: region:608077-612195:-1
so has part: feature:610642-612195:-1:exon
so has part: feature:609090-609765:-1:exon
so has part: feature:608077-608858:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:610642-612195:-1:exon

position:610642:-1
position: 610642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:609090-609765:-1:exon

position:609090:-1
position: 609090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609765:-1
position: 609765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:608077-608858:-1:exon

position:608858:-1
position: 608858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERMARD
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(992625..1020441)
location: region:992625-1020441:-1
so has part: feature:992625-1020441:-1:exon
subclass of: SO_0000010

100053169
type: Gene
SIO_000068: ncbigene

position:992625:-1
position: 992625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020441:-1
position: 1020441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:992625-1020441:-1:exon

ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_023633099.1
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1020312..1020441))
location: region:992625-1020441:-1
so has part: feature:1020312-1020441:-1:exon
so has part: feature:1016734-1016902:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:992625-994205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020312-1020441:-1:exon

position:1020312:-1
position: 1020312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016734-1016902:-1:exon

position:1016734:-1
position: 1016734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1016902:-1
position: 1016902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1015273-1015412:-1:exon

position:1015273:-1
position: 1015273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1015412:-1
position: 1015412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1014255-1014356:-1:exon

position:1014255:-1
position: 1014255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1014356:-1
position: 1014356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1013869-1013958:-1:exon

position:1013869:-1
position: 1013869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1013958:-1
position: 1013958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1011504-1011601:-1:exon

position:1011504:-1
position: 1011504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011601:-1
position: 1011601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1010906-1011042:-1:exon

position:1010906:-1
position: 1010906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1011042:-1
position: 1011042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1009644-1009758:-1:exon

position:1009644:-1
position: 1009644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1009758:-1
position: 1009758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1008801-1008903:-1:exon

position:1008801:-1
position: 1008801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1008903:-1
position: 1008903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1005820-1005849:-1:exon

position:1005820:-1
position: 1005820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1005849:-1
position: 1005849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1003914-1003982:-1:exon

position:1003914:-1
position: 1003914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1003982:-1
position: 1003982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1002528-1002701:-1:exon

position:1002528:-1
position: 1002528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1002701:-1
position: 1002701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:999655-999738:-1:exon

position:999655:-1
position: 999655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:999738:-1
position: 999738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:997954-998030:-1:exon

position:997954:-1
position: 997954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:998030:-1
position: 998030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:997202-997354:-1:exon

position:997202:-1
position: 997202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:997354:-1
position: 997354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:996585-996803:-1:exon

position:996585:-1
position: 996585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:996803:-1
position: 996803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:995497-995610:-1:exon

position:995497:-1
position: 995497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:995610:-1
position: 995610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:992625-994205:-1:exon

position:994205:-1
position: 994205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 76 samples with support for all annotated introns
transcript id: XM_023633093.1
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1020225..1020343))
location: region:992625-1020343:-1
so has part: feature:1020225-1020343:-1:exon
so has part: feature:1016734-1016902:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:992625-994205:-1:exon

position:1020343:-1
position: 1020343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020225-1020343:-1:exon

position:1020225:-1
position: 1020225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1016734-1016902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:992625-994205:-1:exon

ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_023633097.1
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1017704..1017901,1020225..1020243))
location: region:992625-1020243:-1
so has part: feature:1020225-1020243:-1:exon
so has part: feature:1017704-1017901:-1:exon
so has part: feature:1016734-1016902:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:992625-994205:-1:exon

position:1020243:-1
position: 1020243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020225-1020243:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1017704-1017901:-1:exon

position:1017704:-1
position: 1017704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017901:-1
position: 1017901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1016734-1016902:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:992625-994205:-1:exon

ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_023633096.1
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1017704..1017901,1019178..1019238,1020225..1020239))
location: region:992625-1020239:-1
so has part: feature:1020225-1020239:-1:exon
so has part: feature:1019178-1019238:-1:exon
so has part: feature:1017704-1017901:-1:exon
so has part: feature:1016734-1016902:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:992625-994205:-1:exon

position:1020239:-1
position: 1020239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020225-1020239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1019178-1019238:-1:exon

position:1019178:-1
position: 1019178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1019238:-1
position: 1019238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1017704-1017901:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1016734-1016902:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1008801-1008903:-1:exon

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urn:…
SIO_000300: 20
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ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_023633098.1
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1019178..1019238,1019768..1020218))
location: region:992625-1020218:-1
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position:1020218:-1
position: 1020218
reference: sequence
type: ReverseStrandPosition
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urn:…
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position:1019768:-1
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ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_023633095.1
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1017704..1017901,1019178..1019238,1019768..1020218))
location: region:992625-1020218:-1
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urn:…
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urn:…
SIO_000300: 20
SIO_000628: feature:992625-994205:-1:exon

ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_023633094.1
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1017704..1020218))
location: region:992625-1020218:-1
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urn:…
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ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 62 samples with support for all annotated introns
transcript id: XM_005608156.3
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(992625..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1017468..1020218))
location: region:992625-1020218:-1
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urn:…
SIO_000300: 1
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position:1017468:-1
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urn:…
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ERMARD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: ERMARD
product: ER membrane associated RNA degradation, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 53 samples with support for all annotated introns
transcript id: XM_014738167.2
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
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location: region:992625-1016863:-1
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position:1016863:-1
position: 1016863
reference: sequence
type: ReverseStrandPosition
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urn:…
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ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X1
translation: MEVLVEDPITTCLSPSVYDMICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016902,1020225..1020230))
location: region:994022-1020230:-1
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XP_023488861.1
type: Protein
SIO_000068: ncbiprotein

position:994022:-1
position: 994022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1020230:-1
position: 1020230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020225-1020230:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1016734-1016902:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X2
translation: MICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016851))
location: region:994022-1016851:-1
so has part: feature:1016734-1016851:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_023488862.1
type: Protein
SIO_000068: ncbiprotein

position:1016851:-1
position: 1016851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016734-1016851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X2
translation: MICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016851))
location: region:994022-1016851:-1
so has part: feature:1016734-1016851:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_023488863.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016734-1016851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X2
translation: MICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016851))
location: region:994022-1016851:-1
so has part: feature:1016734-1016851:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_023488864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016734-1016851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X2
translation: MICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016851))
location: region:994022-1016851:-1
so has part: feature:1016734-1016851:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_023488865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016734-1016851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X2
translation: MICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016851))
location: region:994022-1016851:-1
so has part: feature:1016734-1016851:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_023488866.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016734-1016851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X2
translation: MICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016851))
location: region:994022-1016851:-1
so has part: feature:1016734-1016851:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_023488867.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016734-1016851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X2
translation: MICKLGFEVRERCDINSIVTQSGEVCWQTITDCVLYTESAQGLDYRGSVRLLGPVCEAVHLHLLSLTRGQFEIRYTPWLQWTSFPELFPEVFDALESRQSPAISLGLMKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014356,1015273..1015412,1016734..1016851))
location: region:994022-1016851:-1
so has part: feature:1016734-1016851:-1:exon
so has part: feature:1015273-1015412:-1:exon
so has part: feature:1014255-1014356:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_005608213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1016734-1016851:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1015273-1015412:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1014255-1014356:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:994022-994205:-1:exon

ERMARD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: ERMARD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endoplasmic reticulum membrane-associated RNA degradation protein isoform X3
translation: MKLTLCLERTLGDVFLLIGKECPFLLRDLLASEELAQVFGQSVVDVLKVFIGSPCGLNLRNILWHGFASPHEVPPKYCSMMILLTAGLGQLLKTYLQQAKLTLTHRPFITLTNLEDLIVFPDVSHEVLSVLEEVMKKSTFILKIMLPYWEVALIKFKSQRFADCAVLLLTQLETGLRKVFATVNKCPKRLLTAESTALYTTFDEILAKHLSDGKINQLPLFLGQPAMEFLWDFLNHQEGPRIRDRLSHGEINLPGFPKEITDQLLAFSVVLLLRFVDEDLLSVFKEKTAVRSLTSLAEGYSARFHPVSWLKKQVLGCGASIGLWPLLPLPGDAEREAARLEGNSETNACNSLLIKITCELCHHVPEDRCVFGDLDDLPTEKQVSGHPENWWPRVLHELCSIHIPTLFCPRTVLEVLAVLRNISTCCSRVSGQVVASMELRHQQWVEKRLRSRQRQNFLRMLSSIKLLSPVLYLILLLIAVEMVNIHELPGKNAHEYQQYLKFLKSVLQYTENLVAYTSQERNKWAEAVSLTHSALLKIWTFSEKKQMLIHLAKKSTSKVVL
SIO_010081: ERMARD
subclass of: SO_0000673
so part of: ERMARD
location: complement(join(994022..994205,995497..995610,996585..996803,997202..997354,997954..998030,999655..999738,1002528..1002701,1003914..1003982,1005820..1005849,1008801..1008903,1009644..1009758,1010906..1011042,1011504..1011601,1013869..1013958,1014255..1014293))
location: region:994022-1014293:-1
so has part: feature:1014255-1014293:-1:exon
so has part: feature:1013869-1013958:-1:exon
so has part: feature:1011504-1011601:-1:exon
so has part: feature:1010906-1011042:-1:exon
so has part: feature:1009644-1009758:-1:exon
so has part: feature:1008801-1008903:-1:exon
so has part: feature:1005820-1005849:-1:exon
so has part: feature:1003914-1003982:-1:exon
so has part: feature:1002528-1002701:-1:exon
so has part: feature:999655-999738:-1:exon
so has part: feature:997954-998030:-1:exon
so has part: feature:997202-997354:-1:exon
so has part: feature:996585-996803:-1:exon
so has part: feature:995497-995610:-1:exon
so has part: feature:994022-994205:-1:exon

XP_014593653.1
type: Protein
SIO_000068: ncbiprotein

position:1014293:-1
position: 1014293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1014255-1014293:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1013869-1013958:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1011504-1011601:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1010906-1011042:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1009644-1009758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1008801-1008903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1005820-1005849:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1003914-1003982:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1002528-1002701:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:999655-999738:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:997954-998030:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:997202-997354:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:996585-996803:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:995497-995610:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:994022-994205:-1:exon

TCTE3
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: TCTE3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1020363..1043425
location: region:1020363-1043425:1
so has part: feature:1020363-1043425:1:exon
subclass of: SO_0000010

100053272
type: Gene
SIO_000068: ncbigene

position:1020363:1
position: 1020363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043425:1
position: 1043425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020363-1043425:1:exon

TCTE3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: TCTE3
product: t-complex-associated-testis-expressed 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 40 samples with support for all annotated introns
transcript id: XM_001488610.4
SIO_010081: TCTE3
subclass of: SO_0000673
so part of: TCTE3
location: join(1020363..1020529,1038015..1038221,1041178..1041336,1043148..1043425)
location: region:1020363-1043425:1
so has part: feature:1020363-1020529:1:exon
so has part: feature:1038015-1038221:1:exon
so has part: feature:1041178-1041336:1:exon
so has part: feature:1043148-1043425:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1020363-1020529:1:exon

position:1020529:1
position: 1020529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1038015-1038221:1:exon

position:1038015:1
position: 1038015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1038221:1
position: 1038221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1041178-1041336:1:exon

position:1041178:1
position: 1041178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1041336:1
position: 1041336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1043148-1043425:1:exon

position:1043148:1
position: 1043148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TCTE3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: TCTE3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tctex1 domain-containing protein 3
translation: MEKRGRGGKLPAHQPAQQPPSTPRKERRPSMFEKEAYAQILRERLRESFHDVQYVEPPFDDSIADLGKEWKSALAKLKFANSYRMEPLKKFQAHSVETKVQQILKESLEDVKYDDKVFSHLSLELADRILLAVKEFGYHRYKFIIKVLFIQKTGQAINIASRWIWDVAWDSWVAAKHETEAYVALALVFALYCE
SIO_010081: TCTE3
subclass of: SO_0000673
so part of: TCTE3
location: join(1020422..1020529,1038015..1038221,1041178..1041336,1043148..1043258)
location: region:1020422-1043258:1
so has part: feature:1020422-1020529:1:exon
so has part: feature:1038015-1038221:1:exon
so has part: feature:1041178-1041336:1:exon
so has part: feature:1043148-1043258:1:exon

XP_001488660.1
type: Protein
SIO_000068: ncbiprotein

position:1020422:1
position: 1020422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1043258:1
position: 1043258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020422-1020529:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1038015-1038221:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1041178-1041336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1043148-1043258:1:exon

LOC111771421
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC111771421
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1051748..1054128)
location: region:1051748-1054128:-1
so has part: feature:1051748-1054128:-1:exon
subclass of: SO_0000011

111771421
type: Gene
SIO_000068: ncbigene

position:1051748:-1
position: 1051748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1054128:-1
position: 1054128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1051748-1054128:-1:exon

LOC111771421
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9796
nc RNA class: lncRNA
gene: LOC111771421
product: uncharacterized LOC111771421
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 50 samples with support for all annotated introns
transcript id: XR_002805254.1
SIO_010081: LOC111771421
subclass of: SO_0000673
so part of: LOC111771421
location: complement(join(1051748..1052146,1053729..1054128))
location: region:1051748-1054128:-1
so has part: feature:1053729-1054128:-1:exon
so has part: feature:1051748-1052146:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1053729-1054128:-1:exon

position:1053729:-1
position: 1053729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1051748-1052146:-1:exon

position:1052146:-1
position: 1052146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PHF10
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: PHF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1053741..1073168
location: region:1053741-1073168:1
so has part: feature:1053741-1073168:1:exon
subclass of: SO_0000010

100049916
type: Gene
SIO_000068: ncbigene

position:1053741:1
position: 1053741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073168:1
position: 1073168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053741-1073168:1:exon

PHF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: PHF10
product: PHD finger protein 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_023633104.1
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1053741..1053784,1057029..1057135,1060078..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073168)
location: region:1053741-1073168:1
so has part: feature:1053741-1053784:1:exon
so has part: feature:1057029-1057135:1:exon
so has part: feature:1060078-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1053741-1053784:1:exon

position:1053784:1
position: 1053784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057029-1057135:1:exon

position:1057029:1
position: 1057029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1057135:1
position: 1057135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1060078-1060155:1:exon

position:1060078:1
position: 1060078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1060155:1
position: 1060155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1061070-1061203:1:exon

position:1061070:1
position: 1061070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061203:1
position: 1061203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1061301-1061450:1:exon

position:1061301:1
position: 1061301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1061450:1
position: 1061450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1062075-1062184:1:exon

position:1062075:1
position: 1062075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062184:1
position: 1062184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1064022-1064175:1:exon

position:1064022:1
position: 1064022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1064175:1
position: 1064175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1066644-1066799:1:exon

position:1066644:1
position: 1066644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1066799:1
position: 1066799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1071277-1071385:1:exon

position:1071277:1
position: 1071277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071385:1
position: 1071385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1071680-1071868:1:exon

position:1071680:1
position: 1071680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1071868:1
position: 1071868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1072972-1073168:1:exon

position:1072972:1
position: 1072972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PHF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: PHF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 10 isoform X3
translation: MTAAEGVSGRMTMKIIQMMEPSHPKGGEWAQEIALGVVKLQVKTLERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSDDAEDGRGDEKRKNKGTSDSSSGNVSEGEGLPDSQEEPLQGKPRSKDKGAAPRKDASKRSVLSKSVPGYKPKVIPNALCGICLKGKETNKKGKAESLIHCSQCDNSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDVCDRGYHTFCVGLGAIPSGRWICDCCQRAPPTPRKVGRRGKNSKEG
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1053756..1053784,1057029..1057135,1060078..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073057)
location: region:1053756-1073057:1
so has part: feature:1053756-1053784:1:exon
so has part: feature:1057029-1057135:1:exon
so has part: feature:1060078-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073057:1:exon

XP_023488872.1
type: Protein
SIO_000068: ncbiprotein

position:1053756:1
position: 1053756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1073057:1
position: 1073057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1053756-1053784:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057029-1057135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1060078-1060155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061070-1061203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061301-1061450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062075-1062184:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064022-1064175:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1066644-1066799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071277-1071385:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071680-1071868:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072972-1073057:1:exon

PHF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: PHF10
product: PHD finger protein 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 134 samples with support for all annotated introns
transcript id: XM_023633103.1
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1054651..1054798,1057029..1057135,1059298..1059428,1060078..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073168)
location: region:1054651-1073168:1
so has part: feature:1054651-1054798:1:exon
so has part: feature:1057029-1057135:1:exon
so has part: feature:1059298-1059428:1:exon
so has part: feature:1060078-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073168:1:exon

position:1054651:1
position: 1054651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054651-1054798:1:exon

position:1054798:1
position: 1054798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1057029-1057135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059298-1059428:1:exon

position:1059298:1
position: 1059298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059428:1
position: 1059428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1060078-1060155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061070-1061203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061301-1061450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062075-1062184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1064022-1064175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066644-1066799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071277-1071385:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1071680-1071868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072972-1073168:1:exon

PHF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: PHF10
product: PHD finger protein 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_023633102.1
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1054652..1054798,1057029..1057135,1059298..1059428,1060072..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073168)
location: region:1054652-1073168:1
so has part: feature:1054652-1054798:1:exon
so has part: feature:1057029-1057135:1:exon
so has part: feature:1059298-1059428:1:exon
so has part: feature:1060072-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073168:1:exon

position:1054652:1
position: 1054652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054652-1054798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057029-1057135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059298-1059428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060072-1060155:1:exon

position:1060072:1
position: 1060072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1061070-1061203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061301-1061450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062075-1062184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1064022-1064175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066644-1066799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071277-1071385:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1071680-1071868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072972-1073168:1:exon

PHF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: PHF10
product: PHD finger protein 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_023633105.1
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1054668..1054798,1057029..1057135,1060078..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073168)
location: region:1054668-1073168:1
so has part: feature:1054668-1054798:1:exon
so has part: feature:1057029-1057135:1:exon
so has part: feature:1060078-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073168:1:exon

position:1054668:1
position: 1054668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054668-1054798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057029-1057135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1060078-1060155:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061070-1061203:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061301-1061450:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1062075-1062184:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1064022-1064175:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1066644-1066799:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071277-1071385:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071680-1071868:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1072972-1073168:1:exon

PHF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: PHF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 10 isoform X1
translation: MAAAAGPGTALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETSSQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYPDLERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSDDAEDGRGDEKRKNKGTSDSSSGNVSEGEGLPDSQEEPLQGKPRSKDKGAAPRKDASKRSVLSKSVPGYKPKVIPNALCGICLKGKETNKKGKAESLIHCSQCDNSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDVCDRGYHTFCVGLGAIPSGRWICDCCQRAPPTPRKVGRRGKNSKEG
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1054712..1054798,1057029..1057135,1059298..1059428,1060072..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073057)
location: region:1054712-1073057:1
so has part: feature:1054712-1054798:1:exon
so has part: feature:1057029-1057135:1:exon
so has part: feature:1059298-1059428:1:exon
so has part: feature:1060072-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073057:1:exon

XP_023488870.1
type: Protein
SIO_000068: ncbiprotein

position:1054712:1
position: 1054712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1054712-1054798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057029-1057135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059298-1059428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060072-1060155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061070-1061203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061301-1061450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062075-1062184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1064022-1064175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066644-1066799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071277-1071385:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1071680-1071868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072972-1073057:1:exon

PHF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: PHF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 10 isoform X2
translation: MAAAAGPGTALSPRPCDSDPATPGAQSPKDDNEDNSNDGTQPSKRRRMGSGDSSRSCETSSQDLGFSYYPAENLIEYKWPPDETGEYYMLQEQVSEYLGVTSFKRKYPERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSDDAEDGRGDEKRKNKGTSDSSSGNVSEGEGLPDSQEEPLQGKPRSKDKGAAPRKDASKRSVLSKSVPGYKPKVIPNALCGICLKGKETNKKGKAESLIHCSQCDNSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDVCDRGYHTFCVGLGAIPSGRWICDCCQRAPPTPRKVGRRGKNSKEG
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1054712..1054798,1057029..1057135,1059298..1059428,1060078..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073057)
location: region:1054712-1073057:1
so has part: feature:1054712-1054798:1:exon
so has part: feature:1057029-1057135:1:exon
so has part: feature:1059298-1059428:1:exon
so has part: feature:1060078-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073057:1:exon

XP_023488871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1054712-1054798:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1057029-1057135:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1059298-1059428:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1060078-1060155:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1061070-1061203:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1061301-1061450:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1062075-1062184:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1064022-1064175:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1066644-1066799:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1071277-1071385:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1071680-1071868:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1072972-1073057:1:exon

PHF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: PHF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PHD finger protein 10 isoform X4
translation: MTMKIIQMMEPSHPKGGEWAQEIALGVVKLQVKTLERRDLSHKEKLYLRELNVITETQCTLGLTALRSDEVIDLMIKEYPAKHAEYSVILQEKERQRITDHYKEYSQMQQQNTQKVEASKVPEYIKKAAKKAAEFNSNLNRERMEERRAYFDLQTHVIQVPQGKYKVLPTERTKVSSYPVALIPGQFQEYYKRYSPDELRYLPLNTALYEPPLDPELPALDSDGDSDDAEDGRGDEKRKNKGTSDSSSGNVSEGEGLPDSQEEPLQGKPRSKDKGAAPRKDASKRSVLSKSVPGYKPKVIPNALCGICLKGKETNKKGKAESLIHCSQCDNSGHPSCLDMTMELVSMIKTYPWQCMECKTCIICGQPHHEEEMMFCDVCDRGYHTFCVGLGAIPSGRWICDCCQRAPPTPRKVGRRGKNSKEG
SIO_010081: PHF10
subclass of: SO_0000673
so part of: PHF10
location: join(1057030..1057135,1060078..1060155,1061070..1061203,1061301..1061450,1062075..1062184,1064022..1064175,1066644..1066799,1071277..1071385,1071680..1071868,1072972..1073057)
location: region:1057030-1073057:1
so has part: feature:1057030-1057135:1:exon
so has part: feature:1060078-1060155:1:exon
so has part: feature:1061070-1061203:1:exon
so has part: feature:1061301-1061450:1:exon
so has part: feature:1062075-1062184:1:exon
so has part: feature:1064022-1064175:1:exon
so has part: feature:1066644-1066799:1:exon
so has part: feature:1071277-1071385:1:exon
so has part: feature:1071680-1071868:1:exon
so has part: feature:1072972-1073057:1:exon

XP_023488873.1
type: Protein
SIO_000068: ncbiprotein

position:1057030:1
position: 1057030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057030-1057135:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1060078-1060155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1061070-1061203:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1061301-1061450:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1062075-1062184:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1064022-1064175:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1066644-1066799:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1071277-1071385:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1071680-1071868:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1072972-1073057:1:exon

C31H6orf120
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: C31H6orf120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1072159..1075315)
location: region:1072159-1075315:-1
so has part: feature:1072159-1075315:-1:exon
subclass of: SO_0000010

102150445
type: Gene
SIO_000068: ncbigene

position:1072159:-1
position: 1072159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1075315:-1
position: 1075315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1072159-1075315:-1:exon

C31H6orf120
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: C31H6orf120
product: chromosome 31 C6orf120 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 160 samples with support for all annotated introns
transcript id: XM_014738166.2
SIO_010081: C31H6orf120
subclass of: SO_0000673
so part of: C31H6orf120
location: complement(join(1072159..1074636,1075202..1075315))
location: region:1072159-1075315:-1
so has part: feature:1075202-1075315:-1:exon
so has part: feature:1072159-1074636:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1075202-1075315:-1:exon

position:1075202:-1
position: 1075202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1072159-1074636:-1:exon

position:1074636:-1
position: 1074636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C31H6orf120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: C31H6orf120
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: UPF0669 protein C6orf120 homolog
translation: MAAPWKSALLLLLASQAVSSVSSSDEEQVPEEWVLLHVVQGQIGAGNYSYLRLNHEGKIVLQMQSLKGDADLYVSDGTLHPSFDDYELQSVTCGQDVVFIPAHFQRPVGIGIYGHPSHHESEFEMKVYYDRTVEQHPFGEAAYSDGSDPSHKHAYAPEDASQEEESVLWTILISILKLVLEILF
SIO_010081: C31H6orf120
subclass of: SO_0000673
so part of: C31H6orf120
location: complement(1074042..1074596)
location: region:1074042-1074596:-1
so has part: feature:1074042-1074596:-1:exon

XP_014593652.1
type: Protein
SIO_000068: ncbiprotein

position:1074042:-1
position: 1074042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1074596:-1
position: 1074596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1074042-1074596:-1:exon

WDR27
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: WDR27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1075353..1287410
location: region:1075353-1287410:1
so has part: feature:1075353-1287410:1:exon
subclass of: SO_0000010

100053367
type: Gene
SIO_000068: ncbigene

position:1075353:1
position: 1075353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1287410:1
position: 1287410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075353-1287410:1:exon

WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_002805247.1
SIO_010081: WDR27
so part of: WDR27
location: join(1075353..1075509,1095944..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1280654..1280879,1286123..1287409)
location: region:1075353-1287409:1
so has part: feature:1075353-1075509:1:exon
so has part: feature:1095944-1096139:1:exon
so has part: feature:1103039-1103180:1:exon
so has part: feature:1106168-1106292:1:exon
so has part: feature:1109189-1109302:1:exon
so has part: feature:1110650-1110701:1:exon
so has part: feature:1112168-1112296:1:exon
so has part: feature:1112490-1112560:1:exon
so has part: feature:1114515-1114635:1:exon
so has part: feature:1115692-1115812:1:exon
so has part: feature:1117316-1117419:1:exon
so has part: feature:1118422-1118489:1:exon
so has part: feature:1119395-1119516:1:exon
so has part: feature:1119924-1120006:1:exon
so has part: feature:1120656-1120734:1:exon
so has part: feature:1123343-1123420:1:exon
so has part: feature:1125881-1125978:1:exon
so has part: feature:1127421-1127510:1:exon
so has part: feature:1132507-1132628:1:exon
so has part: feature:1133785-1133918:1:exon
so has part: feature:1137410-1137507:1:exon
so has part: feature:1138738-1138859:1:exon
so has part: feature:1149328-1149425:1:exon
so has part: feature:1150617-1150719:1:exon
so has part: feature:1163687-1163785:1:exon
so has part: feature:1280654-1280879:1:exon
so has part: feature:1286123-1287409:1:exon

position:1287409:1
position: 1287409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075353-1075509:1:exon

position:1075509:1
position: 1075509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1095944-1096139:1:exon

position:1095944:1
position: 1095944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096139:1
position: 1096139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1103039-1103180:1:exon

position:1103039:1
position: 1103039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103180:1
position: 1103180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1106168-1106292:1:exon

position:1106168:1
position: 1106168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1106292:1
position: 1106292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1109189-1109302:1:exon

position:1109189:1
position: 1109189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1109302:1
position: 1109302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1110650-1110701:1:exon

position:1110650:1
position: 1110650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110701:1
position: 1110701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1112168-1112296:1:exon

position:1112168:1
position: 1112168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112296:1
position: 1112296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1112490-1112560:1:exon

position:1112490:1
position: 1112490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112560:1
position: 1112560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1114515-1114635:1:exon

position:1114515:1
position: 1114515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114635:1
position: 1114635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1115692-1115812:1:exon

position:1115692:1
position: 1115692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115812:1
position: 1115812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1117316-1117419:1:exon

position:1117316:1
position: 1117316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1117419:1
position: 1117419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1118422-1118489:1:exon

position:1118422:1
position: 1118422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118489:1
position: 1118489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1119395-1119516:1:exon

position:1119395:1
position: 1119395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1119516:1
position: 1119516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1119924-1120006:1:exon

position:1119924:1
position: 1119924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120006:1
position: 1120006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1120656-1120734:1:exon

position:1120656:1
position: 1120656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120734:1
position: 1120734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1123343-1123420:1:exon

position:1123343:1
position: 1123343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1123420:1
position: 1123420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1125881-1125978:1:exon

position:1125881:1
position: 1125881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125978:1
position: 1125978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1127421-1127510:1:exon

position:1127421:1
position: 1127421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127510:1
position: 1127510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1132507-1132628:1:exon

position:1132507:1
position: 1132507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132628:1
position: 1132628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1133785-1133918:1:exon

position:1133785:1
position: 1133785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1133918:1
position: 1133918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1137410-1137507:1:exon

position:1137410:1
position: 1137410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137507:1
position: 1137507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1138738-1138859:1:exon

position:1138738:1
position: 1138738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138859:1
position: 1138859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1149328-1149425:1:exon

position:1149328:1
position: 1149328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1149425:1
position: 1149425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1150617-1150719:1:exon

position:1150617:1
position: 1150617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1150719:1
position: 1150719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1163687-1163785:1:exon

position:1163687:1
position: 1163687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163785:1
position: 1163785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1280654-1280879:1:exon

position:1280654:1
position: 1280654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1280879:1
position: 1280879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1286123-1287409:1:exon

position:1286123:1
position: 1286123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 52 samples with support for all annotated introns
transcript id: XR_002805253.1
SIO_010081: WDR27
so part of: WDR27
location: join(1075439..1075602,1095944..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133979,1137410..1137507,1138738..1138788)
location: region:1075439-1138788:1
so has part: feature:1075439-1075602:1:exon
so has part: feature:1095944-1096139:1:exon
so has part: feature:1103039-1103180:1:exon
so has part: feature:1106168-1106292:1:exon
so has part: feature:1109189-1109302:1:exon
so has part: feature:1110650-1110701:1:exon
so has part: feature:1112168-1112296:1:exon
so has part: feature:1112490-1112560:1:exon
so has part: feature:1114515-1114635:1:exon
so has part: feature:1115692-1115812:1:exon
so has part: feature:1117316-1117419:1:exon
so has part: feature:1118422-1118489:1:exon
so has part: feature:1119395-1119516:1:exon
so has part: feature:1119924-1120006:1:exon
so has part: feature:1120656-1120734:1:exon
so has part: feature:1123343-1123420:1:exon
so has part: feature:1125881-1125978:1:exon
so has part: feature:1127421-1127510:1:exon
so has part: feature:1132507-1132628:1:exon
so has part: feature:1133785-1133979:1:exon
so has part: feature:1137410-1137507:1:exon
so has part: feature:1138738-1138788:1:exon

position:1075439:1
position: 1075439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138788:1
position: 1138788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075439-1075602:1:exon

position:1075602:1
position: 1075602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1095944-1096139:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103039-1103180:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106168-1106292:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1109189-1109302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1110650-1110701:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1112168-1112296:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1112490-1112560:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1114515-1114635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1115692-1115812:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1117316-1117419:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1118422-1118489:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119395-1119516:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1119924-1120006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1120656-1120734:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1123343-1123420:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1125881-1125978:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1127421-1127510:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1132507-1132628:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1133785-1133979:1:exon

position:1133979:1
position: 1133979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1137410-1137507:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1138738-1138788:1:exon

WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_002805246.1
SIO_010081: WDR27
so part of: WDR27
location: join(1075441..1075602,1095944..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1280654..1280879,1286123..1287409)
location: region:1075441-1287409:1
so has part: feature:1075441-1075602:1:exon
so has part: feature:1095944-1096139:1:exon
so has part: feature:1103039-1103180:1:exon
so has part: feature:1106168-1106292:1:exon
so has part: feature:1109189-1109302:1:exon
so has part: feature:1110650-1110701:1:exon
so has part: feature:1112168-1112296:1:exon
so has part: feature:1112490-1112560:1:exon
so has part: feature:1114515-1114635:1:exon
so has part: feature:1115692-1115812:1:exon
so has part: feature:1117316-1117419:1:exon
so has part: feature:1118422-1118489:1:exon
so has part: feature:1119395-1119516:1:exon
so has part: feature:1119924-1120006:1:exon
so has part: feature:1120656-1120734:1:exon
so has part: feature:1123343-1123420:1:exon
so has part: feature:1125881-1125978:1:exon
so has part: feature:1127421-1127510:1:exon
so has part: feature:1132507-1132628:1:exon
so has part: feature:1133785-1133918:1:exon
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WDR27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023633100.1
SIO_010081: WDR27
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WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_002805250.1
SIO_010081: WDR27
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WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002805251.1
SIO_010081: WDR27
so part of: WDR27
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WDR27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_023633101.1
SIO_010081: WDR27
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urn:…
SIO_000300: 18
SIO_000628: feature:1127421-1127510:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1132507-1132628:1:exon

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SIO_000300: 20
SIO_000628: feature:1133785-1133918:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1137410-1137507:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1138738-1138859:1:exon

urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
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urn:…
SIO_000300: 25
SIO_000628: feature:1163687-1163785:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1286123-1287407:1:exon

WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002805249.1
SIO_010081: WDR27
so part of: WDR27
location: join(1075442..1075602,1095944..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1180857..1181057,1280654..1280671)
location: region:1075442-1280671:1
so has part: feature:1075442-1075602:1:exon
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position:1280671:1
position: 1280671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:1180857-1181057:1:exon

position:1180857:1
position: 1180857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181057:1
position: 1181057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1280654-1280671:1:exon

WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_002805248.1
SIO_010081: WDR27
so part of: WDR27
location: join(1075442..1075602,1095944..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1180857..1181057,1245757..1246083)
location: region:1075442-1246083:1
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position:1246083:1
position: 1246083
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 27
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position:1245757:1
position: 1245757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WDR27
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 58 samples with support for all annotated introns
transcript id: XM_014738161.2
SIO_010081: WDR27
subclass of: SO_0000673
so part of: WDR27
location: join(1075443..1075602,1095944..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1245757..1246083)
location: region:1075443-1246083:1
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position:1075443:1
position: 1075443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 24
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SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:1245757-1246083:1:exon

WDR27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: WDR27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 27 isoform X3
translation: MEEPQEISSTNDSCVGDIVIEKYLVESKEAASHVQLACSVQHCAFPLDGNQLCIWNTEDPSHQRLILRGHQQPITAVAFGNTANPLLICSASQDCVIMWKLDECREKVLEGLTPRGTVMRTLLGKVLCLRFCPDDRVVAACAGNKILVLDVESLSTSAELEGHRGPVTAAEFCAWRARVLVSVSEDRSFKVWDHRLGSLIYSSSVLTGSHAVSDSRSRLGECARLSAWAAMCEPWSSSQVMSDTSRGFSCASPLLSLFIDEDSRQLVTGSADGQLWIFSLGESHHYRCVTHVDLKKKTESFSTRRVESQLCSLPEESQLPSTDGLERGGEIEVELPVLSLAPCALSLVPSSERGFVSSENASCLWIGSSAGLFILNLANFELEAVLRYKDFRNLSIQVAGSCAVMGKTGNHMAFCLLTSLFGSQVAVLEIRLACLVRSLPRPNVGKDLSVLPRSGVLPTSPLYFALVEEKSTKPASQKQSAVRSVVKDQPLVFHSRVRSSGYTSAPHVTMFLPKTNIKNNGKRSSKCKNNYKCKEYPSESPLPTRLSKQLAVASDPTAVCCLQFSDDGRRLACGLANHLSLVFDADLSGKPAVFSGHDGAVSTVCWSHDGRWLLSTSQDGTLRVWSARRTELALCLGEGMFPRPVQSAQFYYIDAFILSSSGPEFQLLKYHVDTCNDDLRRYKQKSRCKAVFSLRMTDAVEMTSFSAVNDFYSYIVLTAGRNRTLEVFDLNVGRSAALIAGAHSRPVHQICQNKGSSFMSQQSQVYNLFATTAVGDGMRLWDLRTLRCERRFEGHPSRGYPCRIAFSPCGRYVACGAEDRHVYVYEMGSSTFSHRLAGHTDTVTAVAFNPSAPQFRRS
SIO_010081: WDR27
subclass of: SO_0000673
so part of: WDR27
location: join(1095951..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1286123..1286137)
location: region:1095951-1286137:1
so has part: feature:1095951-1096139:1:exon
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XP_023488869.1
type: Protein
SIO_000068: ncbiprotein

position:1095951:1
position: 1095951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1286137:1
position: 1286137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095951-1096139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103039-1103180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106168-1106292:1:exon

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SIO_000300: 4
SIO_000628: feature:1109189-1109302:1:exon

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SIO_000300: 5
SIO_000628: feature:1110650-1110701:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:1112490-1112560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114515-1114635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115692-1115812:1:exon

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SIO_000300: 10
SIO_000628: feature:1117316-1117419:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1118422-1118489:1:exon

urn:…
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SIO_000628: feature:1119395-1119516:1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:1123343-1123420:1:exon

urn:…
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urn:…
SIO_000300: 17
SIO_000628: feature:1127421-1127510:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1132507-1132628:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1133785-1133918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1137410-1137507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1138738-1138859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1149328-1149425:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1150617-1150719:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1163687-1163785:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1286123-1286137:1:exon

WDR27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: WDR27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 27 isoform X1
translation: MEEPQEISSTNDSCVGDIVIEKYLVESKEAASHVQLACSVQHCAFPLDGNQLCIWNTEDPSHQRLILRGHQQPITAVAFGNTANPLLICSASQDCVIMWKLDECREKVLEGLTPRGTVMRTLLGKVLCLRFCPDDRVVAACAGNKILVLDVESLSTSAELEGHRGPVTAAEFCAWRARVLVSVSEDRSFKVWDHRLGSLIYSSSVLTGSHAVSDSRSRLGECARLSAWAAMCEPWSSSQVMSDTSRGFSCASPLLSLFIDEDSRQLVTGSADGQLWIFSLGESHHYRCVTHVDLKKKTESFSTRRVESQLCSLPEESQLPSTDGLERGGEIEVELPVLSLAPCALSLVPSSERGFVSSENASCLWIGSSAGLFILNLANFELEAVLRYKDFRNLSIQVAGSCAVMGKTGNHMAFCLLTSLFGSQVAVLEIRLACLVRSLPRPNVGKDLSVLPRSGVLPTSPLYFALVEEKSTKPASQKQSAVRSVVKDQPLVFHSRVRSSGYTSAPHVTMFLPKTNIKNNGKRSSKCKNNYKCKEYPSESPLPTRLSKQLAVASDPTAVCCLQFSDDGRRLACGLANHLSLVFDADLSGKPAVFSGHDGAVSTVCWSHDGRWLLSTSQDGTLRVWSARRTELALCLGEGMFPRPVQSAQFYYIDAFILSSSGPEFQLLKYHVDTCNDDLRRYKQKSRCKAVFSLRMTDAVEMTSFSAVNDFYSYIVLTAGRNRTLEVFDLNVGRSAALIAGAHSRPVHQICQNKGSSFMSQQSQVYNLFATTAVGDGMRLWDLRTLRCERRFEGHPSRGYPCRIAFSPCGRYVACGAEDRHVYVYEMGSSTFSHRLAGHTDTVTAVAFNPSAPQVLLRSLLPRKLSLCPPSGLTASSSWSAHLSQA
SIO_010081: WDR27
subclass of: SO_0000673
so part of: WDR27
location: join(1095951..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1280654..1280752)
location: region:1095951-1280752:1
so has part: feature:1095951-1096139:1:exon
so has part: feature:1103039-1103180:1:exon
so has part: feature:1106168-1106292:1:exon
so has part: feature:1109189-1109302:1:exon
so has part: feature:1110650-1110701:1:exon
so has part: feature:1112168-1112296:1:exon
so has part: feature:1112490-1112560:1:exon
so has part: feature:1114515-1114635:1:exon
so has part: feature:1115692-1115812:1:exon
so has part: feature:1117316-1117419:1:exon
so has part: feature:1118422-1118489:1:exon
so has part: feature:1119395-1119516:1:exon
so has part: feature:1119924-1120006:1:exon
so has part: feature:1120656-1120734:1:exon
so has part: feature:1123343-1123420:1:exon
so has part: feature:1125881-1125978:1:exon
so has part: feature:1127421-1127510:1:exon
so has part: feature:1132507-1132628:1:exon
so has part: feature:1133785-1133918:1:exon
so has part: feature:1137410-1137507:1:exon
so has part: feature:1138738-1138859:1:exon
so has part: feature:1149328-1149425:1:exon
so has part: feature:1150617-1150719:1:exon
so has part: feature:1163687-1163785:1:exon
so has part: feature:1280654-1280752:1:exon

XP_023488868.1
type: Protein
SIO_000068: ncbiprotein

position:1280752:1
position: 1280752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095951-1096139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103039-1103180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106168-1106292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1109189-1109302:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1110650-1110701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1112168-1112296:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1112490-1112560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114515-1114635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115692-1115812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1117316-1117419:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1118422-1118489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119395-1119516:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119924-1120006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1120656-1120734:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1123343-1123420:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1125881-1125978:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1127421-1127510:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1132507-1132628:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1133785-1133918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1137410-1137507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1138738-1138859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1149328-1149425:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1150617-1150719:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1163687-1163785:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1280654-1280752:1:exon

WDR27
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: WDR27
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 27 isoform X2
translation: MEEPQEISSTNDSCVGDIVIEKYLVESKEAASHVQLACSVQHCAFPLDGNQLCIWNTEDPSHQRLILRGHQQPITAVAFGNTANPLLICSASQDCVIMWKLDECREKVLEGLTPRGTVMRTLLGKVLCLRFCPDDRVVAACAGNKILVLDVESLSTSAELEGHRGPVTAAEFCAWRARVLVSVSEDRSFKVWDHRLGSLIYSSSVLTGSHAVSDSRSRLGECARLSAWAAMCEPWSSSQVMSDTSRGFSCASPLLSLFIDEDSRQLVTGSADGQLWIFSLGESHHYRCVTHVDLKKKTESFSTRRVESQLCSLPEESQLPSTDGLERGGEIEVELPVLSLAPCALSLVPSSERGFVSSENASCLWIGSSAGLFILNLANFELEAVLRYKDFRNLSIQVAGSCAVMGKTGNHMAFCLLTSLFGSQVAVLEIRLACLVRSLPRPNVGKDLSVLPRSGVLPTSPLYFALVEEKSTKPASQKQSAVRSVVKDQPLVFHSRVRSSGYTSAPHVTMFLPKTNIKNNGKRSSKCKNNYKCKEYPSESPLPTRLSKQLAVASDPTAVCCLQFSDDGRRLACGLANHLSLVFDADLSGKPAVFSGHDGAVSTVCWSHDGRWLLSTSQDGTLRVWSARRTELALCLGEGMFPRPVQSAQFYYIDAFILSSSGPEFQLLKYHVDTCNDDLRRYKQKSRCKAVFSLRMTDAVEMTSFSAVNDFYSYIVLTAGRNRTLEVFDLNVGRSAALIAGAHSRPVHQICQNKGSSFMSQQSQVYNLFATTAVGDGMRLWDLRTLRCERRFEGHPSRGYPCRIAFSPCGRYVACGAEDRHVYVYEMGSSTFSHRLAGHTDTVTAVAFNPSAPQLATATLDGKLQLFLAE
SIO_010081: WDR27
subclass of: SO_0000673
so part of: WDR27
location: join(1095951..1096139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1245757..1245807)
location: region:1095951-1245807:1
so has part: feature:1095951-1096139:1:exon
so has part: feature:1103039-1103180:1:exon
so has part: feature:1106168-1106292:1:exon
so has part: feature:1109189-1109302:1:exon
so has part: feature:1110650-1110701:1:exon
so has part: feature:1112168-1112296:1:exon
so has part: feature:1112490-1112560:1:exon
so has part: feature:1114515-1114635:1:exon
so has part: feature:1115692-1115812:1:exon
so has part: feature:1117316-1117419:1:exon
so has part: feature:1118422-1118489:1:exon
so has part: feature:1119395-1119516:1:exon
so has part: feature:1119924-1120006:1:exon
so has part: feature:1120656-1120734:1:exon
so has part: feature:1123343-1123420:1:exon
so has part: feature:1125881-1125978:1:exon
so has part: feature:1127421-1127510:1:exon
so has part: feature:1132507-1132628:1:exon
so has part: feature:1133785-1133918:1:exon
so has part: feature:1137410-1137507:1:exon
so has part: feature:1138738-1138859:1:exon
so has part: feature:1149328-1149425:1:exon
so has part: feature:1150617-1150719:1:exon
so has part: feature:1163687-1163785:1:exon
so has part: feature:1245757-1245807:1:exon

XP_014593647.1
type: Protein
SIO_000068: ncbiprotein

position:1245807:1
position: 1245807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1095951-1096139:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1103039-1103180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106168-1106292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1109189-1109302:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1110650-1110701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1112168-1112296:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1112490-1112560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114515-1114635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115692-1115812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1117316-1117419:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1118422-1118489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119395-1119516:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119924-1120006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1120656-1120734:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1123343-1123420:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1125881-1125978:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1127421-1127510:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1132507-1132628:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1133785-1133918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1137410-1137507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1138738-1138859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1149328-1149425:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1150617-1150719:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1163687-1163785:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1245757-1245807:1:exon

WDR27
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: WDR27
product: WD repeat domain 27, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XR_002805252.1
SIO_010081: WDR27
so part of: WDR27
location: join(1099023..1099139,1103039..1103180,1106168..1106292,1109189..1109302,1110650..1110701,1112168..1112296,1112490..1112560,1114515..1114635,1115692..1115812,1117316..1117419,1118422..1118489,1119395..1119516,1119924..1120006,1120656..1120734,1123343..1123420,1125881..1125978,1127421..1127510,1132507..1132628,1133785..1133918,1137410..1137507,1138738..1138859,1149328..1149425,1150617..1150719,1163687..1163785,1280654..1280879,1286123..1287410)
location: region:1099023-1287410:1
so has part: feature:1099023-1099139:1:exon
so has part: feature:1103039-1103180:1:exon
so has part: feature:1106168-1106292:1:exon
so has part: feature:1109189-1109302:1:exon
so has part: feature:1110650-1110701:1:exon
so has part: feature:1112168-1112296:1:exon
so has part: feature:1112490-1112560:1:exon
so has part: feature:1114515-1114635:1:exon
so has part: feature:1115692-1115812:1:exon
so has part: feature:1117316-1117419:1:exon
so has part: feature:1118422-1118489:1:exon
so has part: feature:1119395-1119516:1:exon
so has part: feature:1119924-1120006:1:exon
so has part: feature:1120656-1120734:1:exon
so has part: feature:1123343-1123420:1:exon
so has part: feature:1125881-1125978:1:exon
so has part: feature:1127421-1127510:1:exon
so has part: feature:1132507-1132628:1:exon
so has part: feature:1133785-1133918:1:exon
so has part: feature:1137410-1137507:1:exon
so has part: feature:1138738-1138859:1:exon
so has part: feature:1149328-1149425:1:exon
so has part: feature:1150617-1150719:1:exon
so has part: feature:1163687-1163785:1:exon
so has part: feature:1280654-1280879:1:exon
so has part: feature:1286123-1287410:1:exon

position:1099023:1
position: 1099023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1099023-1099139:1:exon

position:1099139:1
position: 1099139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1103039-1103180:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1106168-1106292:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1109189-1109302:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1110650-1110701:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1112168-1112296:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1112490-1112560:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1114515-1114635:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1115692-1115812:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1117316-1117419:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1118422-1118489:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1119395-1119516:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1119924-1120006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1120656-1120734:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1123343-1123420:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1125881-1125978:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1127421-1127510:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1132507-1132628:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1133785-1133918:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1137410-1137507:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1138738-1138859:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1149328-1149425:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1150617-1150719:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1163687-1163785:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1280654-1280879:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1286123-1287410:1:exon

LOC100629836
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100629836
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1359862..1375154)
location: region:1359862-1375154:-1
so has part: feature:1359862-1375154:-1:exon

100629836
type: Gene
SIO_000068: ncbigene

position:1359862:-1
position: 1359862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375154:-1
position: 1375154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359862-1375154:-1:exon

LOC100629836
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100629836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC100629836
subclass of: SO_0000673
so part of: LOC100629836
location: complement(1359862..1360291)
location: region:1359862-1360291:-1
so has part: feature:1359862-1360291:-1:exon

position:1360291:-1
position: 1360291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1359862-1360291:-1:exon

LOC100629836
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100629836
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC100629836
subclass of: SO_0000673
so part of: LOC100629836
location: complement(1374968..1375154)
location: region:1374968-1375154:-1
so has part: feature:1374968-1375154:-1:exon

position:1374968:-1
position: 1374968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374968-1375154:-1:exon

THBS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: THBS2
note: thrombospondin 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1399600..1428859
location: region:1399600-1428859:1
so has part: feature:1399600-1428859:1:exon
subclass of: SO_0000010

100050044
type: Gene
SIO_000068: ncbigene

position:1399600:1
position: 1399600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1428859:1
position: 1428859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399600-1428859:1:exon

THBS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: THBS2
product: thrombospondin 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001163117.2
SIO_010081: THBS2
subclass of: SO_0000673
so part of: THBS2
location: join(1399600..1399652,1401201..1401757,1403190..1403274,1406306..1406502,1408472..1408612,1409376..1409472,1412026..1412196,1412466..1412642,1413462..1413635,1414197..1414324,1414404..1414556,1415034..1415252,1417566..1417673,1418458..1418617,1419990..1420108,1420749..1420983,1422644..1422871,1423353..1423624,1424194..1424291,1425565..1425704,1426765..1428859)
location: region:1399600-1428859:1
so has part: feature:1399600-1399652:1:exon
so has part: feature:1401201-1401757:1:exon
so has part: feature:1403190-1403274:1:exon
so has part: feature:1406306-1406502:1:exon
so has part: feature:1408472-1408612:1:exon
so has part: feature:1409376-1409472:1:exon
so has part: feature:1412026-1412196:1:exon
so has part: feature:1412466-1412642:1:exon
so has part: feature:1413462-1413635:1:exon
so has part: feature:1414197-1414324:1:exon
so has part: feature:1414404-1414556:1:exon
so has part: feature:1415034-1415252:1:exon
so has part: feature:1417566-1417673:1:exon
so has part: feature:1418458-1418617:1:exon
so has part: feature:1419990-1420108:1:exon
so has part: feature:1420749-1420983:1:exon
so has part: feature:1422644-1422871:1:exon
so has part: feature:1423353-1423624:1:exon
so has part: feature:1424194-1424291:1:exon
so has part: feature:1425565-1425704:1:exon
so has part: feature:1426765-1428859:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1399600-1399652:1:exon

position:1399652:1
position: 1399652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1401201-1401757:1:exon

position:1401201:1
position: 1401201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1401757:1
position: 1401757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1403190-1403274:1:exon

position:1403190:1
position: 1403190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403274:1
position: 1403274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1406306-1406502:1:exon

position:1406306:1
position: 1406306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1406502:1
position: 1406502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1408472-1408612:1:exon

position:1408472:1
position: 1408472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408612:1
position: 1408612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1409376-1409472:1:exon

position:1409376:1
position: 1409376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1409472:1
position: 1409472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1412026-1412196:1:exon

position:1412026:1
position: 1412026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412196:1
position: 1412196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1412466-1412642:1:exon

position:1412466:1
position: 1412466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412642:1
position: 1412642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1413462-1413635:1:exon

position:1413462:1
position: 1413462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1413635:1
position: 1413635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1414197-1414324:1:exon

position:1414197:1
position: 1414197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414324:1
position: 1414324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1414404-1414556:1:exon

position:1414404:1
position: 1414404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414556:1
position: 1414556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1415034-1415252:1:exon

position:1415034:1
position: 1415034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415252:1
position: 1415252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1417566-1417673:1:exon

position:1417566:1
position: 1417566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1417673:1
position: 1417673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1418458-1418617:1:exon

position:1418458:1
position: 1418458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1418617:1
position: 1418617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1419990-1420108:1:exon

position:1419990:1
position: 1419990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420108:1
position: 1420108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1420749-1420983:1:exon

position:1420749:1
position: 1420749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1420983:1
position: 1420983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1422644-1422871:1:exon

position:1422644:1
position: 1422644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1422871:1
position: 1422871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1423353-1423624:1:exon

position:1423353:1
position: 1423353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423624:1
position: 1423624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1424194-1424291:1:exon

position:1424194:1
position: 1424194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1424291:1
position: 1424291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1425565-1425704:1:exon

position:1425565:1
position: 1425565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1425704:1
position: 1425704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1426765-1428859:1:exon

position:1426765:1
position: 1426765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

THBS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: THBS2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: thrombospondin-2 precursor
translation: MLWTLLLLALWASSSTQAGDQDEDSTFDLFSVSNINRKTIGAKQFRGPDPSVPAYRFVRFDYIPPVSADYLSKMAKIMRQKEGFFLMATLKQDRKSRGTLLALEGPGPSQRQFEIVSNGPADTLDLTYWIDGAQHVISLEDVGLADSQWKNITVQVTGETYSLYVGCDLIDSFTLDEPFYEQLKTEKSRMYVAKGSVRESHFRGLLQNVYLGFENSVEDILSKKGCQQNQGAEANAINENTDTLHLSPQINTEYVGQSSEKRPEVCERSCEELGSMINELSGLHVIVNQLHENLRKVSNDNQFLWELIGGPPKTRNMSACWQDGRFFSENETWVVDSCTKCTCKKFKTVCHQITCPPATCANPSFIEGECCPSCFHSADGEEGWSPWAEWTECSATCGSGTQQRGRSCDVTSNTCLGPSIQTRACSLGKCDNRIRQDGGWSHWSPWSSCSVTCGVGNITRIRLCNSPVPQMGGKSCKGSGRETKACQGPPCPIDGRWSPWSPWSACTVTCAGGIRERTRVCNSPEPQYGGKACVGDIKEHQMCNKRSCPVDGCLSNPCFPGAECSSFPDGSWSCGSCPVGFLGNGTHCEDLDECAVVTDVCFSTSKAHRCVNTNPGFHCLPCPPRYKGSQPFGVGLEAARTEKQVCEPENPCKDKTHSCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWPNKNLVCATNATYHCIKDNCPLLPNSGQEDFDKDGIGDACDDDDDNDGVDDEKDNCQLLFNPRQFDYDKDEVGDRCDNCPYVHNPAQIDTDNNGEGDACSVDIDGDDVFNERDNCPYVYNTDQRDTDGDGVGDHCDNCPLVHNPDQTDVDNDLVGDQCDNNEDIDEDGHQNNQDNCPYISNANQADHDHDGQGDACDSDDDNDGVPDDRDNCRLVSNPEQEDSDGDGRGDACKDDFDNDNIPDIDDVCPENSAISETDFRNFQMVHLDPKGTTQIDPNWVIRHQGKELVQTANSDPGIAVGFDEFGSVDFSGTFYVNTDRDDDYAGFVFGYQSSSRFYVVMWKQVTQTYWEDQPTRAYGYSGVSLKVVNSTTGTGEHLRNALWHTGNTEGQVRTLWHDPKNIGWKDYTAYRWHLTHRPKTGYIRVLVHEGKQVMADSGPIYDQTYAGGRLGLFVFSQEMVYFSDLKYECRDV
SIO_010081: THBS2
subclass of: SO_0000673
so part of: THBS2
location: join(1399601..1399652,1401201..1401757,1403190..1403274,1406306..1406502,1408472..1408612,1409376..1409472,1412026..1412196,1412466..1412642,1413462..1413635,1414197..1414324,1414404..1414556,1415034..1415252,1417566..1417673,1418458..1418617,1419990..1420108,1420749..1420983,1422644..1422871,1423353..1423624,1424194..1424291,1425565..1425704,1426765..1426772)
location: region:1399601-1426772:1
so has part: feature:1399601-1399652:1:exon
so has part: feature:1401201-1401757:1:exon
so has part: feature:1403190-1403274:1:exon
so has part: feature:1406306-1406502:1:exon
so has part: feature:1408472-1408612:1:exon
so has part: feature:1409376-1409472:1:exon
so has part: feature:1412026-1412196:1:exon
so has part: feature:1412466-1412642:1:exon
so has part: feature:1413462-1413635:1:exon
so has part: feature:1414197-1414324:1:exon
so has part: feature:1414404-1414556:1:exon
so has part: feature:1415034-1415252:1:exon
so has part: feature:1417566-1417673:1:exon
so has part: feature:1418458-1418617:1:exon
so has part: feature:1419990-1420108:1:exon
so has part: feature:1420749-1420983:1:exon
so has part: feature:1422644-1422871:1:exon
so has part: feature:1423353-1423624:1:exon
so has part: feature:1424194-1424291:1:exon
so has part: feature:1425565-1425704:1:exon
so has part: feature:1426765-1426772:1:exon

NP_001156589.2
type: Protein
SIO_000068: ncbiprotein

position:1399601:1
position: 1399601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426772:1
position: 1426772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399601-1399652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401201-1401757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1403190-1403274:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1406306-1406502:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1408472-1408612:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1409376-1409472:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412026-1412196:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1412466-1412642:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1413462-1413635:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1414197-1414324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1414404-1414556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1415034-1415252:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1417566-1417673:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1418458-1418617:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1419990-1420108:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1420749-1420983:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1422644-1422871:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1423353-1423624:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1424194-1424291:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1425565-1425704:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1426765-1426772:1:exon

SMOC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: SMOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1860423..2032963)
location: region:1860423-2032963:-1
so has part: feature:1860423-2032963:-1:exon
subclass of: SO_0000010

100054389
type: Gene
SIO_000068: ncbigene

position:1860423:-1
position: 1860423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032963:-1
position: 2032963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1860423-2032963:-1:exon

SMOC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: SMOC2
product: SPARC related modular calcium binding 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 81 samples with support for all annotated introns
transcript id: XM_023633140.1
SIO_010081: SMOC2
subclass of: SO_0000673
so part of: SMOC2
location: complement(join(1860423..1861978,1864720..1864757,1873098..1873372,1875277..1875376,1908161..1908243,1914030..1914216,1952625..1952699,1953646..1953696,1956942..1956989,1973091..1973190,1974369..1974475,1987963..1988134,2032406..2032963))
location: region:1860423-2032963:-1
so has part: feature:2032406-2032963:-1:exon
so has part: feature:1987963-1988134:-1:exon
so has part: feature:1974369-1974475:-1:exon
so has part: feature:1973091-1973190:-1:exon
so has part: feature:1956942-1956989:-1:exon
so has part: feature:1953646-1953696:-1:exon
so has part: feature:1952625-1952699:-1:exon
so has part: feature:1914030-1914216:-1:exon
so has part: feature:1908161-1908243:-1:exon
so has part: feature:1875277-1875376:-1:exon
so has part: feature:1873098-1873372:-1:exon
so has part: feature:1864720-1864757:-1:exon
so has part: feature:1860423-1861978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2032406-2032963:-1:exon

position:2032406:-1
position: 2032406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1987963-1988134:-1:exon

position:1987963:-1
position: 1987963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1988134:-1
position: 1988134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1974369-1974475:-1:exon

position:1974369:-1
position: 1974369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974475:-1
position: 1974475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1973091-1973190:-1:exon

position:1973091:-1
position: 1973091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1973190:-1
position: 1973190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1956942-1956989:-1:exon

position:1956942:-1
position: 1956942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956989:-1
position: 1956989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1953646-1953696:-1:exon

position:1953646:-1
position: 1953646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953696:-1
position: 1953696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1952625-1952699:-1:exon

position:1952625:-1
position: 1952625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1952699:-1
position: 1952699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1914030-1914216:-1:exon

position:1914030:-1
position: 1914030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1914216:-1
position: 1914216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1908161-1908243:-1:exon

position:1908161:-1
position: 1908161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908243:-1
position: 1908243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1875277-1875376:-1:exon

position:1875277:-1
position: 1875277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1875376:-1
position: 1875376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1873098-1873372:-1:exon

position:1873098:-1
position: 1873098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1873372:-1
position: 1873372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1864720-1864757:-1:exon

position:1864720:-1
position: 1864720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1864757:-1
position: 1864757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1860423-1861978:-1:exon

position:1861978:-1
position: 1861978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMOC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: SMOC2
product: SPARC related modular calcium binding 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 68 samples with support for all annotated introns
transcript id: XM_023633139.1
SIO_010081: SMOC2
subclass of: SO_0000673
so part of: SMOC2
location: complement(join(1860423..1861978,1864720..1864757,1873098..1873372,1875277..1875376,1908161..1908243,1914030..1914216,1952625..1952699,1953646..1953729,1956942..1956989,1973091..1973190,1974369..1974475,1987963..1988134,2032406..2032963))
location: region:1860423-2032963:-1
so has part: feature:2032406-2032963:-1:exon
so has part: feature:1987963-1988134:-1:exon
so has part: feature:1974369-1974475:-1:exon
so has part: feature:1973091-1973190:-1:exon
so has part: feature:1956942-1956989:-1:exon
so has part: feature:1953646-1953729:-1:exon
so has part: feature:1952625-1952699:-1:exon
so has part: feature:1914030-1914216:-1:exon
so has part: feature:1908161-1908243:-1:exon
so has part: feature:1875277-1875376:-1:exon
so has part: feature:1873098-1873372:-1:exon
so has part: feature:1864720-1864757:-1:exon
so has part: feature:1860423-1861978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2032406-2032963:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1987963-1988134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1974369-1974475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1973091-1973190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1956942-1956989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1953646-1953729:-1:exon

position:1953729:-1
position: 1953729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1952625-1952699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1914030-1914216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1908161-1908243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1875277-1875376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873098-1873372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1864720-1864757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1860423-1861978:-1:exon

SMOC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: SMOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 2 isoform X2
translation: MHTAPTGKAQPSWPPLHLSLPQTRARGGLWARERATVPSRARRRAREVGLGEERGGREEGRRRIREVLQLFDRSRGSGKGREDRSVPGGQLVESGPPGAVGRGPRGAAPPARSAALAHPAPPPPCQRAGRGRCSERRPRPPGPRAPVVPVRVTMLLPQLCWLPLLAGLLPPARAQKFSALTFLRVDQDKDKDCSLDCGGSPQKPVCASDGRTFLSRCEFQRAKCKDPQLEIAYRGNCKDVSRCVAERKYTQEQARKEFQQVFIPECKDDGTYSQVQCHSYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTDDASAPALETQPQGDEEDIASRYPTLWTEQVKSRQNKTNKNSVSSCDQEQQSALEEARQPKNDNVVIPECAHGGLYKPVQCHPSTGYCWCVLVDTGRPIPGTSTRYEQPKCDNTARAHPTKTRDLYKGRQLQGCPGAKKNEFLTSILDALSTDMVHAVSDPSSSGRLSEPDPSHTLEERVVHWYFKLLDKNSSGDIGKKEIKPFKRFLRKKSKPKKCVKKFVEYCDVNNDKSISVQELMGCLGVTKEEGKANTRKRHTPRGNPESTSNRQPRKQG
SIO_010081: SMOC2
subclass of: SO_0000673
so part of: SMOC2
location: complement(join(1861961..1861978,1864720..1864757,1873098..1873372,1875277..1875376,1908161..1908243,1914030..1914216,1952625..1952699,1953646..1953696,1956942..1956989,1973091..1973190,1974369..1974475,1987963..1988134,2032406..2032948))
location: region:1861961-2032948:-1
so has part: feature:2032406-2032948:-1:exon
so has part: feature:1987963-1988134:-1:exon
so has part: feature:1974369-1974475:-1:exon
so has part: feature:1973091-1973190:-1:exon
so has part: feature:1956942-1956989:-1:exon
so has part: feature:1953646-1953696:-1:exon
so has part: feature:1952625-1952699:-1:exon
so has part: feature:1914030-1914216:-1:exon
so has part: feature:1908161-1908243:-1:exon
so has part: feature:1875277-1875376:-1:exon
so has part: feature:1873098-1873372:-1:exon
so has part: feature:1864720-1864757:-1:exon
so has part: feature:1861961-1861978:-1:exon

XP_023488908.1
type: Protein
SIO_000068: ncbiprotein

position:1861961:-1
position: 1861961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2032948:-1
position: 2032948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2032406-2032948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1987963-1988134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1974369-1974475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1973091-1973190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1956942-1956989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1953646-1953696:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1952625-1952699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1914030-1914216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1908161-1908243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1875277-1875376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873098-1873372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1864720-1864757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1861961-1861978:-1:exon

SMOC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: SMOC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SPARC-related modular calcium-binding protein 2 isoform X1
translation: MHTAPTGKAQPSWPPLHLSLPQTRARGGLWARERATVPSRARRRAREVGLGEERGGREEGRRRIREVLQLFDRSRGSGKGREDRSVPGGQLVESGPPGAVGRGPRGAAPPARSAALAHPAPPPPCQRAGRGRCSERRPRPPGPRAPVVPVRVTMLLPQLCWLPLLAGLLPPARAQKFSALTFLRVDQDKDKDCSLDCGGSPQKPVCASDGRTFLSRCEFQRAKCKDPQLEIAYRGNCKDVSRCVAERKYTQEQARKEFQQVFIPECKDDGTYSQVQCHSYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVNEKLPQREGTGKTVSLQIFSVLNSDDASAPALETQPQGDEEDIASRYPTLWTEQVKSRQNKTNKNSVSSCDQEQQSALEEARQPKNDNVVIPECAHGGLYKPVQCHPSTGYCWCVLVDTGRPIPGTSTRYEQPKCDNTARAHPTKTRDLYKGRQLQGCPGAKKNEFLTSILDALSTDMVHAVSDPSSSGRLSEPDPSHTLEERVVHWYFKLLDKNSSGDIGKKEIKPFKRFLRKKSKPKKCVKKFVEYCDVNNDKSISVQELMGCLGVTKEEGKANTRKRHTPRGNPESTSNRQPRKQG
SIO_010081: SMOC2
subclass of: SO_0000673
so part of: SMOC2
location: complement(join(1861961..1861978,1864720..1864757,1873098..1873372,1875277..1875376,1908161..1908243,1914030..1914216,1952625..1952699,1953646..1953729,1956942..1956989,1973091..1973190,1974369..1974475,1987963..1988134,2032406..2032948))
location: region:1861961-2032948:-1
so has part: feature:2032406-2032948:-1:exon
so has part: feature:1987963-1988134:-1:exon
so has part: feature:1974369-1974475:-1:exon
so has part: feature:1973091-1973190:-1:exon
so has part: feature:1956942-1956989:-1:exon
so has part: feature:1953646-1953729:-1:exon
so has part: feature:1952625-1952699:-1:exon
so has part: feature:1914030-1914216:-1:exon
so has part: feature:1908161-1908243:-1:exon
so has part: feature:1875277-1875376:-1:exon
so has part: feature:1873098-1873372:-1:exon
so has part: feature:1864720-1864757:-1:exon
so has part: feature:1861961-1861978:-1:exon

XP_023488907.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2032406-2032948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1987963-1988134:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1974369-1974475:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1973091-1973190:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1956942-1956989:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1953646-1953729:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1952625-1952699:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1914030-1914216:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1908161-1908243:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1875277-1875376:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1873098-1873372:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1864720-1864757:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1861961-1861978:-1:exon

LOC100630354
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC100630354
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2131405..2132906
location: region:2131405-2132906:1
so has part: feature:2131405-2132906:1:exon

100630354
type: Gene
SIO_000068: ncbigene

position:2131405:1
position: 2131405
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2132906:1
position: 2132906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2131405-2132906:1:exon

LOC100630354
type: Exon
subclass of: SO_0000147
RO_0002162: 9796
gene: LOC100630354
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100630354
subclass of: SO_0000673
so part of: LOC100630354
location: 2131405..2132906
location: region:2131405-2132906:1
so has part: feature:2131405-2132906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2131405-2132906:1:exon

DACT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: DACT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2139338..2150951
location: region:2139338-2150951:1
so has part: feature:2139338-2150951:1:exon
subclass of: SO_0000010

100054531
type: Gene
SIO_000068: ncbigene

position:2139338:1
position: 2139338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150951:1
position: 2150951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139338-2150951:1:exon

DACT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: DACT2
product: dishevelled binding antagonist of beta catenin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_023632959.1
SIO_010081: DACT2
subclass of: SO_0000673
so part of: DACT2
location: join(2139338..2139671,2146121..2146253,2147610..2147852,2148758..2150951)
location: region:2139338-2150951:1
so has part: feature:2139338-2139671:1:exon
so has part: feature:2146121-2146253:1:exon
so has part: feature:2147610-2147852:1:exon
so has part: feature:2148758-2150951:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2139338-2139671:1:exon

position:2139671:1
position: 2139671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2146121-2146253:1:exon

position:2146121:1
position: 2146121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2146253:1
position: 2146253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2147610-2147852:1:exon

position:2147610:1
position: 2147610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2147852:1
position: 2147852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2148758-2150951:1:exon

position:2148758:1
position: 2148758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DACT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: DACT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dapper homolog 2
translation: MWTPGGPPGPAGWDRRRVGARLRAALAGLHELQGLRAAQQARVRSALAMQPPPGAAAAPRGPRAHELRLEAALAALQEQLNRLRRQDVGLKTHLDQLDQQISELQLDVRRTSSEAPDSDSRPSSGFYELSDGGSCSLSTSCTSVCSDRMSSSLSVLLPAAPKTRLGVGDCRPRSADETTVCGTPLPTWGPQATEEGASRPRPVSTGDLERVRPAEVGLQKASADPKSTPLLCHGMDLPPHMLDPKYQRDLVSKGGKEVYPYPSPLHAVALQSPLFALTKETPQGDGHSPPSKALPGRAGLSSIRTGPVLEAGPAGAYIDRLLRLRGRGTPPRGSVGEQGPPRCEVSPSRQELSGRRVDSEDHLEKLVCTPGRAEVGGTAQRGNASGCILEQHPLVDTPHPSILPEEGCNPSNGSSRGENIPGSPPLGCGRAQQSALDGCKGKARSPTGRTGRESPALAPGHCGRPLFVASRASPTGLRTSLPKTKATKIRRGTSDKALRSGRQPPPWGTLAVPPLPPEWGSVLRRRPTLAGDAPGRSCSEASLYPVPCFVPLLVARQEGHQASAQALFPFAAAPLVAAPGDARRKQRRWQSSVEISARARPLSIPDPSPAARRGGGPRPRPPRPRQDAPSGSESDASEGPSVLPSTIAESSGDEASDHTANRFGDGESSTSDCEAGGRGHGGGLAWPRGAPQPSPRAPAGARPPLPPVPKLCRIKASKALKKKIRRFQPATLKVMTMV
SIO_010081: DACT2
subclass of: SO_0000673
so part of: DACT2
location: join(2139432..2139671,2146121..2146253,2147610..2147852,2148758..2150358)
location: region:2139432-2150358:1
so has part: feature:2139432-2139671:1:exon
so has part: feature:2146121-2146253:1:exon
so has part: feature:2147610-2147852:1:exon
so has part: feature:2148758-2150358:1:exon

XP_023488727.1
type: Protein
SIO_000068: ncbiprotein

position:2139432:1
position: 2139432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2150358:1
position: 2150358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2139432-2139671:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2146121-2146253:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2147610-2147852:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2148758-2150358:1:exon

FRMD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: FRMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2305886..2342455
location: region:2305886-2342455:1
so has part: feature:2305886-2342455:1:exon
subclass of: SO_0000010

100054660
type: Gene
SIO_000068: ncbigene

position:2305886:1
position: 2305886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2342455:1
position: 2342455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2305886-2342455:1:exon

FRMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FRMD1
product: FERM domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023632886.1
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2305886..2306304,2306672..2306900,2315111..2315311,2323103..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2342455)
location: region:2305886-2342455:1
so has part: feature:2305886-2306304:1:exon
so has part: feature:2306672-2306900:1:exon
so has part: feature:2315111-2315311:1:exon
so has part: feature:2323103-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2342455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2305886-2306304:1:exon

position:2306304:1
position: 2306304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2306672-2306900:1:exon

position:2306672:1
position: 2306672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2306900:1
position: 2306900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2315111-2315311:1:exon

position:2315111:1
position: 2315111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2315311:1
position: 2315311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2323103-2323239:1:exon

position:2323103:1
position: 2323103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2323239:1
position: 2323239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2325254-2325344:1:exon

position:2325254:1
position: 2325254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2325344:1
position: 2325344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2332495-2332574:1:exon

position:2332495:1
position: 2332495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2332574:1
position: 2332574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2332975-2333051:1:exon

position:2332975:1
position: 2332975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2333051:1
position: 2333051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2334147-2334333:1:exon

position:2334147:1
position: 2334147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334333:1
position: 2334333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2334445-2334600:1:exon

position:2334445:1
position: 2334445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2334600:1
position: 2334600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2335527-2335592:1:exon

position:2335527:1
position: 2335527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335592:1
position: 2335592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2335717-2335785:1:exon

position:2335717:1
position: 2335717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2335785:1
position: 2335785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2336417-2336591:1:exon

position:2336417:1
position: 2336417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2336591:1
position: 2336591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2337105-2337443:1:exon

position:2337105:1
position: 2337105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2337443:1
position: 2337443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2339193-2339272:1:exon

position:2339193:1
position: 2339193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339272:1
position: 2339272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2339981-2342455:1:exon

position:2339981:1
position: 2339981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FRMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FRMD1
product: FERM domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023632889.1
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2305886..2306304,2306672..2306900,2315115..2315311,2323103..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2342455)
location: region:2305886-2342455:1
so has part: feature:2305886-2306304:1:exon
so has part: feature:2306672-2306900:1:exon
so has part: feature:2315115-2315311:1:exon
so has part: feature:2323103-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2342455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2305886-2306304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2306672-2306900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2315115-2315311:1:exon

position:2315115:1
position: 2315115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2323103-2323239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2339981-2342455:1:exon

FRMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FRMD1
product: FERM domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_023632887.1
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2305886..2306304,2306672..2306900,2323103..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2342455)
location: region:2305886-2342455:1
so has part: feature:2305886-2306304:1:exon
so has part: feature:2306672-2306900:1:exon
so has part: feature:2323103-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2342455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2305886-2306304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2306672-2306900:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2323103-2323239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2339981-2342455:1:exon

FRMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FRMD1
product: FERM domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023632885.1
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2305886..2306304,2306672..2306886,2315111..2315311,2323103..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2342455)
location: region:2305886-2342455:1
so has part: feature:2305886-2306304:1:exon
so has part: feature:2306672-2306886:1:exon
so has part: feature:2315111-2315311:1:exon
so has part: feature:2323103-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2342455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2305886-2306304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2306672-2306886:1:exon

position:2306886:1
position: 2306886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2315111-2315311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2323103-2323239:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2339981-2342455:1:exon

FRMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FRMD1
product: FERM domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_023632888.1
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2305886..2306304,2306672..2306886,2323103..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2342455)
location: region:2305886-2342455:1
so has part: feature:2305886-2306304:1:exon
so has part: feature:2306672-2306886:1:exon
so has part: feature:2323103-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2342455:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2305886-2306304:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2306672-2306886:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2323103-2323239:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2339981-2342455:1:exon

FRMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FRMD1
product: FERM domain containing 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_005614904.3
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2322750..2322948,2323103..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2342455)
location: region:2322750-2342455:1
so has part: feature:2322750-2322948:1:exon
so has part: feature:2323103-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2342455:1:exon

position:2322750:1
position: 2322750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2322750-2322948:1:exon

position:2322948:1
position: 2322948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2323103-2323239:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2339981-2342455:1:exon

FRMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FRMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 1
translation: MTPEHRDVLVLLPTREQLRLVVGVQATGRELFQQVCDLTSIREAHFFGLSVVRNNEYVFMDLEQKLSKYFSKDWKRERHTGAGRSRAPFVAFLRVQYYVENGRLISDRRARHLYYCHLKERVLRSECAHREEAYFLLAAYGLQADLGNHREAAHSGRYFEPHAYFPPWIITRRGSAYILRHAPAMHREQRGLSPREAVLRFIREACRLEDVPVHFFRLRQDKKGEQPTIVLGLTLKGMHIYQEVNHALQLLYDFPWSHVGKLAFLGKKFEIRLDGLPSAKKLVYYTGCASRSRHLLQLLSSSHQLHLALQPLLRQLRELEEAEEKKCYRESYISDTLELELDPVGGGSPSSPSSKDSGQRPPHRLSLLSADSHGSSHTSGVEADSRALEPGEMSVDEPFVSELFCGQVPSCSSSTSQCSSGMDGGGPKGDARDQRNASHPEPLSVVRVTLLRMRRRSTEALCQVPEAEDRAPSPAPAPPSRPLGPAEPRTWGSTDSLSLRLLGDDQLPQEFVV
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2323171..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2340133)
location: region:2323171-2340133:1
so has part: feature:2323171-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2340133:1:exon

XP_023488653.1
type: Protein
SIO_000068: ncbiprotein

position:2323171:1
position: 2323171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2340133:1
position: 2340133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2323171-2323239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2339981-2340133:1:exon

FRMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FRMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 1
translation: MTPEHRDVLVLLPTREQLRLVVGVQATGRELFQQVCDLTSIREAHFFGLSVVRNNEYVFMDLEQKLSKYFSKDWKRERHTGAGRSRAPFVAFLRVQYYVENGRLISDRRARHLYYCHLKERVLRSECAHREEAYFLLAAYGLQADLGNHREAAHSGRYFEPHAYFPPWIITRRGSAYILRHAPAMHREQRGLSPREAVLRFIREACRLEDVPVHFFRLRQDKKGEQPTIVLGLTLKGMHIYQEVNHALQLLYDFPWSHVGKLAFLGKKFEIRLDGLPSAKKLVYYTGCASRSRHLLQLLSSSHQLHLALQPLLRQLRELEEAEEKKCYRESYISDTLELELDPVGGGSPSSPSSKDSGQRPPHRLSLLSADSHGSSHTSGVEADSRALEPGEMSVDEPFVSELFCGQVPSCSSSTSQCSSGMDGGGPKGDARDQRNASHPEPLSVVRVTLLRMRRRSTEALCQVPEAEDRAPSPAPAPPSRPLGPAEPRTWGSTDSLSLRLLGDDQLPQEFVV
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2323171..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2340133)
location: region:2323171-2340133:1
so has part: feature:2323171-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2340133:1:exon

XP_023488654.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2323171-2323239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2339981-2340133:1:exon

FRMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FRMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 1
translation: MTPEHRDVLVLLPTREQLRLVVGVQATGRELFQQVCDLTSIREAHFFGLSVVRNNEYVFMDLEQKLSKYFSKDWKRERHTGAGRSRAPFVAFLRVQYYVENGRLISDRRARHLYYCHLKERVLRSECAHREEAYFLLAAYGLQADLGNHREAAHSGRYFEPHAYFPPWIITRRGSAYILRHAPAMHREQRGLSPREAVLRFIREACRLEDVPVHFFRLRQDKKGEQPTIVLGLTLKGMHIYQEVNHALQLLYDFPWSHVGKLAFLGKKFEIRLDGLPSAKKLVYYTGCASRSRHLLQLLSSSHQLHLALQPLLRQLRELEEAEEKKCYRESYISDTLELELDPVGGGSPSSPSSKDSGQRPPHRLSLLSADSHGSSHTSGVEADSRALEPGEMSVDEPFVSELFCGQVPSCSSSTSQCSSGMDGGGPKGDARDQRNASHPEPLSVVRVTLLRMRRRSTEALCQVPEAEDRAPSPAPAPPSRPLGPAEPRTWGSTDSLSLRLLGDDQLPQEFVV
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2323171..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2340133)
location: region:2323171-2340133:1
so has part: feature:2323171-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2340133:1:exon

XP_023488655.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2323171-2323239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2339981-2340133:1:exon

FRMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FRMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 1
translation: MTPEHRDVLVLLPTREQLRLVVGVQATGRELFQQVCDLTSIREAHFFGLSVVRNNEYVFMDLEQKLSKYFSKDWKRERHTGAGRSRAPFVAFLRVQYYVENGRLISDRRARHLYYCHLKERVLRSECAHREEAYFLLAAYGLQADLGNHREAAHSGRYFEPHAYFPPWIITRRGSAYILRHAPAMHREQRGLSPREAVLRFIREACRLEDVPVHFFRLRQDKKGEQPTIVLGLTLKGMHIYQEVNHALQLLYDFPWSHVGKLAFLGKKFEIRLDGLPSAKKLVYYTGCASRSRHLLQLLSSSHQLHLALQPLLRQLRELEEAEEKKCYRESYISDTLELELDPVGGGSPSSPSSKDSGQRPPHRLSLLSADSHGSSHTSGVEADSRALEPGEMSVDEPFVSELFCGQVPSCSSSTSQCSSGMDGGGPKGDARDQRNASHPEPLSVVRVTLLRMRRRSTEALCQVPEAEDRAPSPAPAPPSRPLGPAEPRTWGSTDSLSLRLLGDDQLPQEFVV
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2323171..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2340133)
location: region:2323171-2340133:1
so has part: feature:2323171-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2340133:1:exon

XP_023488656.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2323171-2323239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2339981-2340133:1:exon

FRMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FRMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 1
translation: MTPEHRDVLVLLPTREQLRLVVGVQATGRELFQQVCDLTSIREAHFFGLSVVRNNEYVFMDLEQKLSKYFSKDWKRERHTGAGRSRAPFVAFLRVQYYVENGRLISDRRARHLYYCHLKERVLRSECAHREEAYFLLAAYGLQADLGNHREAAHSGRYFEPHAYFPPWIITRRGSAYILRHAPAMHREQRGLSPREAVLRFIREACRLEDVPVHFFRLRQDKKGEQPTIVLGLTLKGMHIYQEVNHALQLLYDFPWSHVGKLAFLGKKFEIRLDGLPSAKKLVYYTGCASRSRHLLQLLSSSHQLHLALQPLLRQLRELEEAEEKKCYRESYISDTLELELDPVGGGSPSSPSSKDSGQRPPHRLSLLSADSHGSSHTSGVEADSRALEPGEMSVDEPFVSELFCGQVPSCSSSTSQCSSGMDGGGPKGDARDQRNASHPEPLSVVRVTLLRMRRRSTEALCQVPEAEDRAPSPAPAPPSRPLGPAEPRTWGSTDSLSLRLLGDDQLPQEFVV
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2323171..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2340133)
location: region:2323171-2340133:1
so has part: feature:2323171-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2340133:1:exon

XP_023488657.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2323171-2323239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2339981-2340133:1:exon

FRMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FRMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FERM domain-containing protein 1
translation: MTPEHRDVLVLLPTREQLRLVVGVQATGRELFQQVCDLTSIREAHFFGLSVVRNNEYVFMDLEQKLSKYFSKDWKRERHTGAGRSRAPFVAFLRVQYYVENGRLISDRRARHLYYCHLKERVLRSECAHREEAYFLLAAYGLQADLGNHREAAHSGRYFEPHAYFPPWIITRRGSAYILRHAPAMHREQRGLSPREAVLRFIREACRLEDVPVHFFRLRQDKKGEQPTIVLGLTLKGMHIYQEVNHALQLLYDFPWSHVGKLAFLGKKFEIRLDGLPSAKKLVYYTGCASRSRHLLQLLSSSHQLHLALQPLLRQLRELEEAEEKKCYRESYISDTLELELDPVGGGSPSSPSSKDSGQRPPHRLSLLSADSHGSSHTSGVEADSRALEPGEMSVDEPFVSELFCGQVPSCSSSTSQCSSGMDGGGPKGDARDQRNASHPEPLSVVRVTLLRMRRRSTEALCQVPEAEDRAPSPAPAPPSRPLGPAEPRTWGSTDSLSLRLLGDDQLPQEFVV
SIO_010081: FRMD1
subclass of: SO_0000673
so part of: FRMD1
location: join(2323171..2323239,2325254..2325344,2332495..2332574,2332975..2333051,2334147..2334333,2334445..2334600,2335527..2335592,2335717..2335785,2336417..2336591,2337105..2337443,2339193..2339272,2339981..2340133)
location: region:2323171-2340133:1
so has part: feature:2323171-2323239:1:exon
so has part: feature:2325254-2325344:1:exon
so has part: feature:2332495-2332574:1:exon
so has part: feature:2332975-2333051:1:exon
so has part: feature:2334147-2334333:1:exon
so has part: feature:2334445-2334600:1:exon
so has part: feature:2335527-2335592:1:exon
so has part: feature:2335717-2335785:1:exon
so has part: feature:2336417-2336591:1:exon
so has part: feature:2337105-2337443:1:exon
so has part: feature:2339193-2339272:1:exon
so has part: feature:2339981-2340133:1:exon

XP_005614961.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2323171-2323239:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2325254-2325344:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2332495-2332574:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2332975-2333051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2334147-2334333:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2334445-2334600:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2335527-2335592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2335717-2335785:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2336417-2336591:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2337105-2337443:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2339193-2339272:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2339981-2340133:1:exon

KIF25
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: KIF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2350298..2403984)
location: region:2350298-2403984:-1
so has part: feature:2350298-2403984:-1:exon
subclass of: SO_0000010

100054755
type: Gene
SIO_000068: ncbigene

position:2350298:-1
position: 2350298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403984:-1
position: 2403984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2350298-2403984:-1:exon

KIF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: KIF25
product: kinesin family member 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023632901.1
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350298..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394615,2402029..2402094,2403833..2403984))
location: region:2350298-2403984:-1
so has part: feature:2403833-2403984:-1:exon
so has part: feature:2402029-2402094:-1:exon
so has part: feature:2394493-2394615:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350298-2350562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403833-2403984:-1:exon

position:2403833:-1
position: 2403833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2402029-2402094:-1:exon

position:2402029:-1
position: 2402029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2402094:-1
position: 2402094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2394493-2394615:-1:exon

position:2394493:-1
position: 2394493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2394615:-1
position: 2394615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2392248-2392386:-1:exon

position:2392248:-1
position: 2392248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2392386:-1
position: 2392386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2390217-2390320:-1:exon

position:2390217:-1
position: 2390217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390320:-1
position: 2390320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2386375-2386463:-1:exon

position:2386375:-1
position: 2386375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386463:-1
position: 2386463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2384505-2384541:-1:exon

position:2384505:-1
position: 2384505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384541:-1
position: 2384541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2372537-2372604:-1:exon

position:2372537:-1
position: 2372537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2372604:-1
position: 2372604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2363956-2364030:-1:exon

position:2363956:-1
position: 2363956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2364030:-1
position: 2364030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2355859-2356035:-1:exon

position:2355859:-1
position: 2355859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2356035:-1
position: 2356035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2354376-2354527:-1:exon

position:2354376:-1
position: 2354376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2354527:-1
position: 2354527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2352725-2352925:-1:exon

position:2352725:-1
position: 2352725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352925:-1
position: 2352925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2352127-2352282:-1:exon

position:2352127:-1
position: 2352127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2352282:-1
position: 2352282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2350298-2350562:-1:exon

position:2350562:-1
position: 2350562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KIF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: KIF25
product: kinesin family member 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_023632898.1
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350298..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2361387..2361536,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394615,2402029..2402094,2403833..2403984))
location: region:2350298-2403984:-1
so has part: feature:2403833-2403984:-1:exon
so has part: feature:2402029-2402094:-1:exon
so has part: feature:2394493-2394615:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2361387-2361536:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350298-2350562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2403833-2403984:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402029-2402094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2394493-2394615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2392248-2392386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2390217-2390320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2386375-2386463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2384505-2384541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372537-2372604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2363956-2364030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2361387-2361536:-1:exon

position:2361387:-1
position: 2361387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2361536:-1
position: 2361536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2355859-2356035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2354376-2354527:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2352725-2352925:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2352127-2352282:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2350298-2350562:-1:exon

KIF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: KIF25
product: kinesin family member 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_023632899.1
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350298..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2361387..2361536,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394615,2401838..2401941,2402029..2402094,2403833..2403847))
location: region:2350298-2403847:-1
so has part: feature:2403833-2403847:-1:exon
so has part: feature:2402029-2402094:-1:exon
so has part: feature:2401838-2401941:-1:exon
so has part: feature:2394493-2394615:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2361387-2361536:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350298-2350562:-1:exon

position:2403847:-1
position: 2403847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2403833-2403847:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402029-2402094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2401838-2401941:-1:exon

position:2401838:-1
position: 2401838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2401941:-1
position: 2401941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2394493-2394615:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2392248-2392386:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2390217-2390320:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2386375-2386463:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2384505-2384541:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2372537-2372604:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2363956-2364030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2361387-2361536:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2355859-2356035:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2354376-2354527:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2352725-2352925:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2352127-2352282:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2350298-2350562:-1:exon

KIF25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: KIF25
product: kinesin family member 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_023632900.1
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350298..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2361387..2361536,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394615,2394964..2396646))
location: region:2350298-2396646:-1
so has part: feature:2394964-2396646:-1:exon
so has part: feature:2394493-2394615:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2361387-2361536:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350298-2350562:-1:exon

position:2396646:-1
position: 2396646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2394964-2396646:-1:exon

position:2394964:-1
position: 2394964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2394493-2394615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2392248-2392386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2390217-2390320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2386375-2386463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384505-2384541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372537-2372604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2363956-2364030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2361387-2361536:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2355859-2356035:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2354376-2354527:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2352725-2352925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2352127-2352282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2350298-2350562:-1:exon

KIF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: KIF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF25 isoform X4
translation: MPARGGRWAGFWEQRARQLQRQVQAKEERIVELETENAILHLKLAEYQEMTGKSSHAATRFCLLCDEQEGLQRGTRSSLAQLCRVIQKVKQDRKELRSSSLDLLRDCQGQQQDCGSEIVTAVQGAQRHHEAVLAWQSKAGCLEQSLRETTERYQLEKQKRKQLHNRLVELKGNIRVHCRIRPALPFDKESEDPLSQNSSVSAEVAHAVDDETVLVRWDRPGHPWINKTYNFERVYGPAESQRVVFEEVCPLLTSLLDGLISENPSRSPKVAVSVVEVYNNDIFDLLAKDSCAVTSGVKREVLTTKAGKKEIPSLTYESVHSTEEFLTLVDGRLRLRAKHATLVHADSSRSHLIITVTLTTAPSWDSPANRQSDVSVLKEPDCPSPRQPATGRRHSAAHRTSSWSPGAAPEGPTGHMEQVHAKLQLVDLAGSECAGVSGVTGAALRETSFINRSLAALADVLGALSERRGHVPYRNSKLTHLLQDVLGGDAKLLVILCVSPCRKHAAETLQSLGFGTRARQVQRGPARAGRVAPRTPR
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350408..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394615,2402029..2402094,2403833..2403904))
location: region:2350408-2403904:-1
so has part: feature:2403833-2403904:-1:exon
so has part: feature:2402029-2402094:-1:exon
so has part: feature:2394493-2394615:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350408-2350562:-1:exon

XP_023488669.1
type: Protein
SIO_000068: ncbiprotein

position:2350408:-1
position: 2350408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2403904:-1
position: 2403904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2403833-2403904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402029-2402094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2394493-2394615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2392248-2392386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2390217-2390320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2386375-2386463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2384505-2384541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372537-2372604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2363956-2364030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2355859-2356035:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2354376-2354527:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2352725-2352925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2352127-2352282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2350408-2350562:-1:exon

KIF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: KIF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF25 isoform X1
translation: MPARGGRWAGFWEQRARQLQRQVQAKEERIVELETENAILHLKLAEYQEMTGKSSHAATRFCLLCDEQEGLQRGTRSSLAQLCRVIQKVKQDRKELRSSSLDLLRDCQGQQQDCGSEIVTAVQGAQRHHEAVLAWQSKAGCLEQSLRETTERYQLEKQKRKQLHNRLVELKGNIRVHCRIRPALPFDKESEDPLSQNSSVSAEVAHAVDDETVLVRWDRPGHPWINKTYNFERVYGPAESQRVVFEEVCPLLTSLLDGYNVCIMAYGQTGSGKSYTMMGPHSRKEPVLPVESQGDLGIIPRAAEELFRLISENPSRSPKVAVSVVEVYNNDIFDLLAKDSCAVTSGVKREVLTTKAGKKEIPSLTYESVHSTEEFLTLVDGRLRLRAKHATLVHADSSRSHLIITVTLTTAPSWDSPANRQSDVSVLKEPDCPSPRQPATGRRHSAAHRTSSWSPGAAPEGPTGHMEQVHAKLQLVDLAGSECAGVSGVTGAALRETSFINRSLAALADVLGALSERRGHVPYRNSKLTHLLQDVLGGDAKLLVILCVSPCRKHAAETLQSLGFGTRARQVQRGPARAGRVAPRTPR
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350408..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2361387..2361536,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394615,2402029..2402094,2403833..2403904))
location: region:2350408-2403904:-1
so has part: feature:2403833-2403904:-1:exon
so has part: feature:2402029-2402094:-1:exon
so has part: feature:2394493-2394615:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2361387-2361536:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350408-2350562:-1:exon

XP_023488666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2403833-2403904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2402029-2402094:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2394493-2394615:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2392248-2392386:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2390217-2390320:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2386375-2386463:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2384505-2384541:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2372537-2372604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2363956-2364030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2361387-2361536:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2355859-2356035:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2354376-2354527:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2352725-2352925:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2352127-2352282:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2350408-2350562:-1:exon

KIF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: KIF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF25 isoform X2
translation: MFEVSSPTEQYQEMTGKSSHAATRFCLLCDEQEGLQRGTRSSLAQLCRVIQKVKQDRKELRSSSLDLLRDCQGQQQDCGSEIVTAVQGAQRHHEAVLAWQSKAGCLEQSLRETTERYQLEKQKRKQLHNRLVELKGNIRVHCRIRPALPFDKESEDPLSQNSSVSAEVAHAVDDETVLVRWDRPGHPWINKTYNFERVYGPAESQRVVFEEVCPLLTSLLDGYNVCIMAYGQTGSGKSYTMMGPHSRKEPVLPVESQGDLGIIPRAAEELFRLISENPSRSPKVAVSVVEVYNNDIFDLLAKDSCAVTSGVKREVLTTKAGKKEIPSLTYESVHSTEEFLTLVDGRLRLRAKHATLVHADSSRSHLIITVTLTTAPSWDSPANRQSDVSVLKEPDCPSPRQPATGRRHSAAHRTSSWSPGAAPEGPTGHMEQVHAKLQLVDLAGSECAGVSGVTGAALRETSFINRSLAALADVLGALSERRGHVPYRNSKLTHLLQDVLGGDAKLLVILCVSPCRKHAAETLQSLGFGTRARQVQRGPARAGRVAPRTPR
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350408..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2361387..2361536,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394615,2401838..2401867))
location: region:2350408-2401867:-1
so has part: feature:2401838-2401867:-1:exon
so has part: feature:2394493-2394615:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2361387-2361536:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350408-2350562:-1:exon

XP_023488667.1
type: Protein
SIO_000068: ncbiprotein

position:2401867:-1
position: 2401867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2401838-2401867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2394493-2394615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2392248-2392386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2390217-2390320:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2386375-2386463:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384505-2384541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2372537-2372604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2363956-2364030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2361387-2361536:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2355859-2356035:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2354376-2354527:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2352725-2352925:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2352127-2352282:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2350408-2350562:-1:exon

KIF25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: KIF25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kinesin-like protein KIF25 isoform X3
translation: MTGKSSHAATRFCLLCDEQEGLQRGTRSSLAQLCRVIQKVKQDRKELRSSSLDLLRDCQGQQQDCGSEIVTAVQGAQRHHEAVLAWQSKAGCLEQSLRETTERYQLEKQKRKQLHNRLVELKGNIRVHCRIRPALPFDKESEDPLSQNSSVSAEVAHAVDDETVLVRWDRPGHPWINKTYNFERVYGPAESQRVVFEEVCPLLTSLLDGYNVCIMAYGQTGSGKSYTMMGPHSRKEPVLPVESQGDLGIIPRAAEELFRLISENPSRSPKVAVSVVEVYNNDIFDLLAKDSCAVTSGVKREVLTTKAGKKEIPSLTYESVHSTEEFLTLVDGRLRLRAKHATLVHADSSRSHLIITVTLTTAPSWDSPANRQSDVSVLKEPDCPSPRQPATGRRHSAAHRTSSWSPGAAPEGPTGHMEQVHAKLQLVDLAGSECAGVSGVTGAALRETSFINRSLAALADVLGALSERRGHVPYRNSKLTHLLQDVLGGDAKLLVILCVSPCRKHAAETLQSLGFGTRARQVQRGPARAGRVAPRTPR
SIO_010081: KIF25
subclass of: SO_0000673
so part of: KIF25
location: complement(join(2350408..2350562,2352127..2352282,2352725..2352925,2354376..2354527,2355859..2356035,2361387..2361536,2363956..2364030,2372537..2372604,2384505..2384541,2386375..2386463,2390217..2390320,2392248..2392386,2394493..2394606))
location: region:2350408-2394606:-1
so has part: feature:2394493-2394606:-1:exon
so has part: feature:2392248-2392386:-1:exon
so has part: feature:2390217-2390320:-1:exon
so has part: feature:2386375-2386463:-1:exon
so has part: feature:2384505-2384541:-1:exon
so has part: feature:2372537-2372604:-1:exon
so has part: feature:2363956-2364030:-1:exon
so has part: feature:2361387-2361536:-1:exon
so has part: feature:2355859-2356035:-1:exon
so has part: feature:2354376-2354527:-1:exon
so has part: feature:2352725-2352925:-1:exon
so has part: feature:2352127-2352282:-1:exon
so has part: feature:2350408-2350562:-1:exon

XP_023488668.1
type: Protein
SIO_000068: ncbiprotein

position:2394606:-1
position: 2394606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2394493-2394606:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2392248-2392386:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2390217-2390320:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386375-2386463:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384505-2384541:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2372537-2372604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2363956-2364030:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2361387-2361536:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2355859-2356035:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2354376-2354527:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2352725-2352925:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2352127-2352282:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2350408-2350562:-1:exon

AFDN
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2410277..2550132)
location: region:2410277-2550132:-1
so has part: feature:2410277-2550132:-1:exon
subclass of: SO_0000010

100054846
type: Gene
SIO_000068: ncbigene

position:2410277:-1
position: 2410277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2550132:-1
position: 2550132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2410277-2550132:-1:exon

AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_023632879.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507990,2509705..2509817,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
so has part: feature:2549733-2550132:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507990:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2410277-2412233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2550132:-1:exon

position:2549733:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

position:2513734:-1
position: 2513734
reference: sequence
type: ReverseStrandPosition
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position:2513929:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

position:2509705:-1
position: 2509705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2509817:-1
position: 2509817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507990:-1:exon

position:2507830:-1
position: 2507830
reference: sequence
type: ReverseStrandPosition
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position:2507990:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

position:2505197:-1
position: 2505197
reference: sequence
type: ReverseStrandPosition
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position:2505357:-1
position: 2505357
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

position:2498246:-1
position: 2498246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2498403:-1
position: 2498403
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

position:2492206:-1
position: 2492206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2492317:-1
position: 2492317
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

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position: 2490649
reference: sequence
type: ReverseStrandPosition
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position:2490816:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:2482692-2482786:-1:exon

position:2482692:-1
position: 2482692
reference: sequence
type: ReverseStrandPosition
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position:2482786:-1
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:2481589-2481851:-1:exon

position:2481589:-1
position: 2481589
reference: sequence
type: ReverseStrandPosition
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position:2481851:-1
position: 2481851
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:2474036-2474105:-1:exon

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position: 2474036
reference: sequence
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position:2474105:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:2470416-2470531:-1:exon

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position:2470531:-1
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urn:…
SIO_000300: 13
SIO_000628: feature:2466302-2466363:-1:exon

position:2466302:-1
position: 2466302
reference: sequence
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position:2466363:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:2465990-2466195:-1:exon

position:2465990:-1
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type: ReverseStrandPosition
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position:2466195:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:2462889-2463034:-1:exon

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position: 2462889
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type: ReverseStrandPosition
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position:2463034:-1
position: 2463034
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type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:2462466-2462560:-1:exon

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reference: sequence
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position:2462560:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:2461714-2461979:-1:exon

position:2461714:-1
position: 2461714
reference: sequence
type: ReverseStrandPosition
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position:2461979:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 18
SIO_000628: feature:2460206-2460349:-1:exon

position:2460206:-1
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reference: sequence
type: ReverseStrandPosition
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position:2460349:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:2458436-2458634:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:2454895-2454998:-1:exon

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reference: sequence
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position:2454998:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:2452554-2452640:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:2452640:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:2437392-2437457:-1:exon

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position:2437457:-1
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urn:…
SIO_000300: 23
SIO_000628: feature:2437106-2437179:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:2436513-2436631:-1:exon

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position:2436631:-1
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urn:…
SIO_000300: 25
SIO_000628: feature:2434635-2434829:-1:exon

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reference: sequence
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position:2434829:-1
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urn:…
SIO_000300: 26
SIO_000628: feature:2433923-2434014:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:2433404-2433589:-1:exon

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position:2433589:-1
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:2429226-2430227:-1:exon

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reference: sequence
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position:2430227:-1
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urn:…
SIO_000300: 29
SIO_000628: feature:2426971-2427006:-1:exon

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reference: sequence
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position:2427006:-1
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urn:…
SIO_000300: 30
SIO_000628: feature:2420163-2420297:-1:exon

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reference: sequence
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position:2420297:-1
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:2416814-2417099:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:2417099:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:2413040-2413124:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:2413124:-1
position: 2413124
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:2410277-2412233:-1:exon

position:2412233:-1
position: 2412233
reference: sequence
type: ReverseStrandPosition
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_023632877.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509817,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
so has part: feature:2549733-2550132:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2410277-2412233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2550132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

position:2507993:-1
position: 2507993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

position:2487747:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2487791:-1
position: 2487791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2410277-2412233:-1:exon

AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_023632869.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509817,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
so has part: feature:2549733-2550132:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
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so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
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so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
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so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2410277-2412233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2550132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

position:2463775:-1
position: 2463775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2463795:-1
position: 2463795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

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urn:…
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023632871.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507990,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
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urn:…
SIO_000300: 3
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position:2509820:-1
position: 2509820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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urn:…
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_023632876.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_023632878.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420291,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
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position:2420291:-1
position: 2420291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_023632873.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
so has part: feature:2549733-2550132:-1:exon
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_023632875.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420291,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 61 samples with support for all annotated introns
transcript id: XM_023632874.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
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AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023632872.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420291,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
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SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420291:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2410277-2412233:-1:exon

AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023632868.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
so has part: feature:2549733-2550132:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2410277-2412233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2550132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2410277-2412233:-1:exon

AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_023632880.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2410277..2412233,2413040..2413124,2416586..2416688,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2550132))
location: region:2410277-2550132:-1
so has part: feature:2549733-2550132:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2416586-2416688:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2410277-2412233:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2550132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2416586-2416688:-1:exon

position:2416586:-1
position: 2416586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2416688:-1
position: 2416688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:2410277-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X11
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507990,2509705..2509817,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507990:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488647.1
type: Protein
SIO_000068: ncbiprotein

position:2412080:-1
position: 2412080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2549837:-1
position: 2549837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X9
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509817,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488645.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X2
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509817,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488637.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X3
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507990,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507990:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507990:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X8
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488644.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X10
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420291,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2420163-2420291:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488646.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420163-2420291:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X5
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X7
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420291,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2420163-2420291:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488643.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2420163-2420291:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X6
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488642.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X4
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420291,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420291:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420291:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X1
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAGPNSYTGSAGTALGAHDAHRDSRERLSKSQDADAPGGSGAPENLTFKERQRLFSQGQDVSNRVKASRKLTELENELNTK
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2412080..2412233,2413040..2413124,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2412080-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2413040-2413124:-1:exon
so has part: feature:2412080-2412233:-1:exon

XP_023488636.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2413040-2413124:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2412080-2412233:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X12
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQEVDQVDQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARQTALPAISVLDLLQDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKRRQEEGYYSRLEAERRRQHDEAERRLLEPEEPGLGRPPLPRGYEPPPPSPPAGAPPPPPQRGASFLQAQALSPDALYTAKLVAYGEEEAEDGSLAAALGQRQQYCSRSRPAPAPSKKARRPRAQPLPGSRTKLLHGICWDSPRCP
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2413076..2413124,2416586..2416688,2416814..2417099,2420163..2420297,2426971..2427006,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2463775..2463795,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509820,2513734..2513929,2549733..2549837))
location: region:2413076-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509820:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2463775-2463795:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2426971-2427006:-1:exon
so has part: feature:2420163-2420297:-1:exon
so has part: feature:2416814-2417099:-1:exon
so has part: feature:2416586-2416688:-1:exon
so has part: feature:2413076-2413124:-1:exon

XP_023488648.1
type: Protein
SIO_000068: ncbiprotein

position:2413076:-1
position: 2413076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2463775-2463795:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:2426971-2427006:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:2420163-2420297:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:2416814-2417099:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:2416586-2416688:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:2413076-2413124:-1:exon

AFDN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: AFDN
product: afadin, adherens junction formation factor, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_023632881.1
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2417734..2420291,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509817,2513734..2513929,2549733..2550132))
location: region:2417734-2550132:-1
so has part: feature:2549733-2550132:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2417734-2420291:-1:exon

position:2417734:-1
position: 2417734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2550132:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2417734-2420291:-1:exon

AFDN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: AFDN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: afadin isoform X13
translation: MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCIRVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGERRLDVDEKPLVVQLNWNKDDREGRFVLKNENDAFPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEAMRQASDKDDRPFQGDDIENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPQDYCIARVMLPPGAQHSDDKGAKEVILDEDECPLQIFREWPGDKGSLVFQLKRRPPDYIPKKSKKHGDGKLAKGKERADAASYGSALPPDKLPYLVELSPGRRNHFAYYNYHTYEDGSDSRDKPKLYRLQLSVTEVGTDKVDDSSIQLFGSGIQPHHCDLTNMDGVVTVTPRSIDAETYVEGQRISETTVLQSGMKVQFGASHVFKFVDPSQDHALAKRSVDGGLTVKGPRHKPGVVQETTFDLGGDVHSGTALPTSKSATRLDSDRVPSASSTAERGMVKPMVREQQQDYRRQDSRTQDLPGPELILPASIEFRESAEDSFLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSSQYRPDVSPTERTHKVIAIVNKMVSMMEGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCLQSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNRLVTDPESGLCSHYWGAIIRQQLGHVEAWAEKQGLELAADCHLSRIVQATTLLTMDKYAPEDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPADLIGSVVAVAENTADELARSDGRQVQLEEDPDLQLPFLLPEDGYSCDVVRNMPNGLQEFLDPLCQRGFCRLIPHARSPGTWTIYFEGADYESHLMRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGAIYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGSPESPQLPWAEYSEPKKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSTYAPGTTAKITSVSTGNLCTEEQTPPPRPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPSYEEKPHLHTDSSHSSSAIQRVTRSQEELREEKAYQLERHRIEAVMDHKSDSDMWINQSSSLGSSASSQEHLDHSSKAGTPASTLTKSGPGRWKTPAAVPPMPVAVSQPIRTDLPPPPPPPPAHYASELDGIPMDLPLPPPPSASHLGPQSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQALNPAQFPPAAVQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSREELSSGDSLSPDPWKRDAKEKLEKQQQMHIVDMLSKEIQELQGKPDRTAEENDRLRKLMLEWQFQKRLQESKQKDEDDEEEEDDDVDTMLIMQRLEAERRARDEERRRQQQLEEMRKREAEDRARQEEERRQQEEERVRRDAEEKVMAL
SIO_010081: AFDN
subclass of: SO_0000673
so part of: AFDN
location: complement(join(2420148..2420291,2429226..2430227,2433404..2433589,2433923..2434014,2434635..2434829,2436513..2436631,2437106..2437179,2437392..2437457,2452554..2452640,2454895..2454998,2458436..2458634,2460206..2460349,2461714..2461979,2462466..2462560,2462889..2463034,2465990..2466195,2466302..2466363,2470416..2470531,2474036..2474105,2481589..2481851,2482692..2482786,2487747..2487791,2490649..2490816,2492206..2492317,2498246..2498403,2505197..2505357,2507830..2507993,2509705..2509817,2513734..2513929,2549733..2549837))
location: region:2420148-2549837:-1
so has part: feature:2549733-2549837:-1:exon
so has part: feature:2513734-2513929:-1:exon
so has part: feature:2509705-2509817:-1:exon
so has part: feature:2507830-2507993:-1:exon
so has part: feature:2505197-2505357:-1:exon
so has part: feature:2498246-2498403:-1:exon
so has part: feature:2492206-2492317:-1:exon
so has part: feature:2490649-2490816:-1:exon
so has part: feature:2487747-2487791:-1:exon
so has part: feature:2482692-2482786:-1:exon
so has part: feature:2481589-2481851:-1:exon
so has part: feature:2474036-2474105:-1:exon
so has part: feature:2470416-2470531:-1:exon
so has part: feature:2466302-2466363:-1:exon
so has part: feature:2465990-2466195:-1:exon
so has part: feature:2462889-2463034:-1:exon
so has part: feature:2462466-2462560:-1:exon
so has part: feature:2461714-2461979:-1:exon
so has part: feature:2460206-2460349:-1:exon
so has part: feature:2458436-2458634:-1:exon
so has part: feature:2454895-2454998:-1:exon
so has part: feature:2452554-2452640:-1:exon
so has part: feature:2437392-2437457:-1:exon
so has part: feature:2437106-2437179:-1:exon
so has part: feature:2436513-2436631:-1:exon
so has part: feature:2434635-2434829:-1:exon
so has part: feature:2433923-2434014:-1:exon
so has part: feature:2433404-2433589:-1:exon
so has part: feature:2429226-2430227:-1:exon
so has part: feature:2420148-2420291:-1:exon

XP_023488649.1
type: Protein
SIO_000068: ncbiprotein

position:2420148:-1
position: 2420148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2549733-2549837:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2513734-2513929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2509705-2509817:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2507830-2507993:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2505197-2505357:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2498246-2498403:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2492206-2492317:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2490649-2490816:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2487747-2487791:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2482692-2482786:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2481589-2481851:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2474036-2474105:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2470416-2470531:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2466302-2466363:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2465990-2466195:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2462889-2463034:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2462466-2462560:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2461714-2461979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2460206-2460349:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2458436-2458634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2454895-2454998:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2452554-2452640:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2437392-2437457:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2437106-2437179:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2436513-2436631:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2434635-2434829:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2433923-2434014:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2433404-2433589:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2429226-2430227:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2420148-2420291:-1:exon

UNC93A
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2877814..2917593
location: region:2877814-2917593:1
so has part: feature:2877814-2917593:1:exon
subclass of: SO_0000010

100050109
type: Gene
SIO_000068: ncbigene

position:2877814:1
position: 2877814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2917593:1
position: 2917593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2877814-2917593:1:exon

UNC93A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_014738153.2
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2877814..2877832,2879236..2879337,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2901645)
location: region:2877814-2901645:1
so has part: feature:2877814-2877832:1:exon
so has part: feature:2879236-2879337:1:exon
so has part: feature:2882332-2882433:1:exon
so has part: feature:2883397-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2901645:1:exon

position:2901645:1
position: 2901645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2877814-2877832:1:exon

position:2877832:1
position: 2877832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2879236-2879337:1:exon

position:2879236:1
position: 2879236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2879337:1
position: 2879337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2882332-2882433:1:exon

position:2882332:1
position: 2882332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2882433:1
position: 2882433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2883397-2883584:1:exon

position:2883397:1
position: 2883397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883584:1
position: 2883584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2888980-2889161:1:exon

position:2888980:1
position: 2888980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2889161:1
position: 2889161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2890132-2890361:1:exon

position:2890132:1
position: 2890132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2890361:1
position: 2890361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2891991-2892116:1:exon

position:2891991:1
position: 2891991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2892116:1
position: 2892116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2897308-2897522:1:exon

position:2897308:1
position: 2897308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2897522:1
position: 2897522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2899631-2899766:1:exon

position:2899631:1
position: 2899631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2899766:1
position: 2899766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2900119-2900250:1:exon

position:2900119:1
position: 2900119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2900250:1
position: 2900250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2900579-2901645:1:exon

position:2900579:1
position: 2900579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UNC93A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_005608137.3
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2879208..2879337,2882332..2882433,2883442..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2901645)
location: region:2879208-2901645:1
so has part: feature:2879208-2879337:1:exon
so has part: feature:2882332-2882433:1:exon
so has part: feature:2883442-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2901645:1:exon

position:2879208:1
position: 2879208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2879208-2879337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883442-2883584:1:exon

position:2883442:1
position: 2883442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2900579-2901645:1:exon

UNC93A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_023633165.1
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2880948..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2901645)
location: region:2880948-2901645:1
so has part: feature:2880948-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
so has part: feature:2883397-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2901645:1:exon

position:2880948:1
position: 2880948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880948-2881795:1:exon

position:2881795:1
position: 2881795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883397-2883584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2900579-2901645:1:exon

UNC93A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_005608136.3
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2880949..2881795,2882332..2882433,2883442..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2901645)
location: region:2880949-2901645:1
so has part: feature:2880949-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
so has part: feature:2883442-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2901645:1:exon

position:2880949:1
position: 2880949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880949-2881795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883442-2883584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2900579-2901645:1:exon

UNC93A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_023633168.1
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2880970..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2902626..2902774)
location: region:2880970-2902774:1
so has part: feature:2880970-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
so has part: feature:2883397-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2902626-2902774:1:exon

position:2880970:1
position: 2880970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2902774:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2880970-2881795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883397-2883584:1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2902626-2902774:1:exon

position:2902626:1
position: 2902626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UNC93A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_023633169.1
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2881010..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2914934..2917593)
location: region:2881010-2917593:1
so has part: feature:2881010-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
so has part: feature:2883397-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2914934-2917593:1:exon

position:2881010:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881010-2881795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2914934-2917593:1:exon

position:2914934:1
position: 2914934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UNC93A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_002805290.1
SIO_010081: UNC93A
so part of: UNC93A
location: join(2881019..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2913198..2913272,2914934..2917593)
location: region:2881019-2917593:1
so has part: feature:2881019-2881795:1:exon
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so has part: feature:2883397-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2913198-2913272:1:exon
so has part: feature:2914934-2917593:1:exon

position:2881019:1
position: 2881019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881019-2881795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

urn:…
SIO_000300: 3
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2913198-2913272:1:exon

position:2913198:1
position: 2913198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2913272:1
position: 2913272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2914934-2917593:1:exon

UNC93A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002805285.1
SIO_010081: UNC93A
so part of: UNC93A
location: join(2881040..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2908417..2908813,2914934..2917593)
location: region:2881040-2917593:1
so has part: feature:2881040-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
so has part: feature:2883397-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
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so has part: feature:2899631-2899766:1:exon
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so has part: feature:2914934-2917593:1:exon

position:2881040:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:2881040-2881795:1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

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SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2908417-2908813:1:exon

position:2908417:1
position: 2908417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2908813:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2914934-2917593:1:exon

UNC93A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_002805286.1
SIO_010081: UNC93A
so part of: UNC93A
location: join(2881040..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2908417..2908813,2914934..2915096,2915679..2917593)
location: region:2881040-2917593:1
so has part: feature:2881040-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
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so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2881040-2881795:1:exon

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SIO_000300: 2
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SIO_000300: 3
SIO_000628: feature:2883397-2883584:1:exon

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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

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SIO_000300: 10
SIO_000628: feature:2908417-2908813:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2914934-2915096:1:exon

position:2915096:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:2915679-2917593:1:exon

position:2915679:1
position: 2915679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UNC93A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_002805287.1
SIO_010081: UNC93A
so part of: UNC93A
location: join(2881040..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2908417..2908813,2914934..2915096,2916763..2917593)
location: region:2881040-2917593:1
so has part: feature:2881040-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
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so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2881040-2881795:1:exon

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SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

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SIO_000300: 3
SIO_000628: feature:2883397-2883584:1:exon

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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

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SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2908417-2908813:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2914934-2915096:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2916763-2917593:1:exon

position:2916763:1
position: 2916763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UNC93A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_002805289.1
SIO_010081: UNC93A
so part of: UNC93A
location: join(2881040..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2908417..2908813,2913198..2914531)
location: region:2881040-2914531:1
so has part: feature:2881040-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
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so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
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so has part: feature:2900119-2900250:1:exon
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position:2914531:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2881040-2881795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

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SIO_000300: 3
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SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2908417-2908813:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2913198-2914531:1:exon

UNC93A
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_002805288.1
SIO_010081: UNC93A
so part of: UNC93A
location: join(2881040..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2908417..2908813,2910177..2913189)
location: region:2881040-2913189:1
so has part: feature:2881040-2881795:1:exon
so has part: feature:2882332-2882433:1:exon
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so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
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position:2913189:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:2881040-2881795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

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SIO_000628: feature:2888980-2889161:1:exon

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SIO_000300: 6
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SIO_000300: 7
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SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2908417-2908813:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2910177-2913189:1:exon

position:2910177:1
position: 2910177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UNC93A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: UNC93A
product: unc-93 homolog A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_023633167.1
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2881040..2881795,2882332..2882433,2883397..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2908417..2909211)
location: region:2881040-2909211:1
so has part: feature:2881040-2881795:1:exon
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position:2909211:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:2881040-2881795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2882332-2882433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883397-2883584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2908417-2909211:1:exon

UNC93A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog A isoform X4
translation: MESSLKNVLVVSFGFLLLFTAFGGLQNLQSSLYREEGLGVAALSTIYGAVLVSSMFLPSVLIKKLGCKWSIVISMCCYVAFSLGNFYASWYTLIPTSIMLGLGAAPLWSAHCTYLTIMGNTHAEEAGKIGKNVVNQYFGIFFLIFQSSGVWGNLISSLVFGQKPTQGAIPEENLLSCGASDCLMATASTNSTQSPSQELIYTLLGIYTGSGVLAVLLVATFLQPIKDVQEKSKGEEKSSSFWSTLLSTFKLLRDKRLCLLILLPVYSGFQQAFLSGDYTRSYVTCALGIQFVGYVMISFSATNALCSVLYGKISQYTGRIALYMLGTGIHVSCVIALLLWKPHPHQLAMFFVFSGLWGMADAVWQTQNNGWLWIICVDML
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2883498..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2914934..2914968)
location: region:2883498-2914968:1
so has part: feature:2883498-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2914934-2914968:1:exon

XP_023488937.1
type: Protein
SIO_000068: ncbiprotein

position:2883498:1
position: 2883498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2914968:1
position: 2914968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883498-2883584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2914934-2914968:1:exon

UNC93A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog A isoform X2
translation: MESSLKNVLVVSFGFLLLFTAFGGLQNLQSSLYREEGLGVAALSTIYGAVLVSSMFLPSVLIKKLGCKWSIVISMCCYVAFSLGNFYASWYTLIPTSIMLGLGAAPLWSAHCTYLTIMGNTHAEEAGKIGKNVVNQYFGIFFLIFQSSGVWGNLISSLVFGQKPTQGAIPEENLLSCGASDCLMATASTNSTQSPSQELIYTLLGIYTGSGVLAVLLVATFLQPIKDVQEKSKGEEKSSSFWSTLLSTFKLLRDKRLCLLILLPVYSGFQQAFLSGDYTRSYVTCALGIQFVGYVMISFSATNALCSVLYGKISQYTGRIALYMLGTGIHVSCVIALLLWKPHPHQLAMFFVFSGLWGMADAVWQTQNNALYGVLFEKNKEAAFANYRLWEAVGFVIAFGYSTFLCIYVKLYILLGVLSLTMVAYGIVEYLESKNLAQPLAMEETKPAEEGEIQTKL
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2883498..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2908417..2908682)
location: region:2883498-2908682:1
so has part: feature:2883498-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2908417-2908682:1:exon

XP_023488935.1
type: Protein
SIO_000068: ncbiprotein

position:2908682:1
position: 2908682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883498-2883584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2908417-2908682:1:exon

UNC93A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog A isoform X3
translation: MESSLKNVLVVSFGFLLLFTAFGGLQNLQSSLYREEGLGVAALSTIYGAVLVSSMFLPSVLIKKLGCKWSIVISMCCYVAFSLGNFYASWYTLIPTSIMLGLGAAPLWSAHCTYLTIMGNTHAEEAGKIGKNVVNQYFGIFFLIFQSSGVWGNLISSLVFGQKPTQGAIPEENLLSCGASDCLMATASTNSTQSPSQELIYTLLGIYTGSGVLAVLLVATFLQPIKDVQEKSKGEEKSSSFWSTLLSTFKLLRDKRLCLLILLPVYSGFQQAFLSGDYTRSYVTCALGIQFVGYVMISFSATNALCSVLYGKISQYTGRIALYMLGTGIHVSCVIALLLWKPHPHQLAMFFVFSGLWGMADAVWQTQNNAQIRLSDNLSTSPHPRTGVSFHPVPSPDDEADKSGRERGFSLSK
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2883498..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2902626..2902759)
location: region:2883498-2902759:1
so has part: feature:2883498-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2902626-2902759:1:exon

XP_023488936.1
type: Protein
SIO_000068: ncbiprotein

position:2902759:1
position: 2902759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883498-2883584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2902626-2902759:1:exon

UNC93A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog A isoform X1
translation: MESSLKNVLVVSFGFLLLFTAFGGLQNLQSSLYREEGLGVAALSTIYGAVLVSSMFLPSVLIKKLGCKWSIVISMCCYVAFSLGNFYASWYTLIPTSIMLGLGAAPLWSAHCTYLTIMGNTHAEEAGKIGKNVVNQYFGIFFLIFQSSGVWGNLISSLVFGQKPTQGAIPEENLLSCGASDCLMATASTNSTQSPSQELIYTLLGIYTGSGVLAVLLVATFLQPIKDVQEKSKGEEKSSSFWSTLLSTFKLLRDKRLCLLILLPVYSGFQQAFLSGDYTRSYVTCALGIQFVGYVMISFSATNALCSVLYGKISQYTGRIALYMLGTGIHVSCVIALLLWKPHPHQLAMFFVFSGLWGMADAVWQTQNNVMAVPSWPSTGKASLSSGIAPCTLGAGVRGRRPLQGALSQDGEMDVQLLEQKCLQIPIITSKQAALGIGSCQFSGRIELGFLLVWETPGD
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2883498..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2900850)
location: region:2883498-2900850:1
so has part: feature:2883498-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2900850:1:exon

XP_023488933.1
type: Protein
SIO_000068: ncbiprotein

position:2900850:1
position: 2900850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2883498-2883584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2900579-2900850:1:exon

UNC93A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog A isoform X1
translation: MESSLKNVLVVSFGFLLLFTAFGGLQNLQSSLYREEGLGVAALSTIYGAVLVSSMFLPSVLIKKLGCKWSIVISMCCYVAFSLGNFYASWYTLIPTSIMLGLGAAPLWSAHCTYLTIMGNTHAEEAGKIGKNVVNQYFGIFFLIFQSSGVWGNLISSLVFGQKPTQGAIPEENLLSCGASDCLMATASTNSTQSPSQELIYTLLGIYTGSGVLAVLLVATFLQPIKDVQEKSKGEEKSSSFWSTLLSTFKLLRDKRLCLLILLPVYSGFQQAFLSGDYTRSYVTCALGIQFVGYVMISFSATNALCSVLYGKISQYTGRIALYMLGTGIHVSCVIALLLWKPHPHQLAMFFVFSGLWGMADAVWQTQNNVMAVPSWPSTGKASLSSGIAPCTLGAGVRGRRPLQGALSQDGEMDVQLLEQKCLQIPIITSKQAALGIGSCQFSGRIELGFLLVWETPGD
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2883498..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2900850)
location: region:2883498-2900850:1
so has part: feature:2883498-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2900850:1:exon

XP_005608193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2883498-2883584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2900579-2900850:1:exon

UNC93A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog A isoform X1
translation: MESSLKNVLVVSFGFLLLFTAFGGLQNLQSSLYREEGLGVAALSTIYGAVLVSSMFLPSVLIKKLGCKWSIVISMCCYVAFSLGNFYASWYTLIPTSIMLGLGAAPLWSAHCTYLTIMGNTHAEEAGKIGKNVVNQYFGIFFLIFQSSGVWGNLISSLVFGQKPTQGAIPEENLLSCGASDCLMATASTNSTQSPSQELIYTLLGIYTGSGVLAVLLVATFLQPIKDVQEKSKGEEKSSSFWSTLLSTFKLLRDKRLCLLILLPVYSGFQQAFLSGDYTRSYVTCALGIQFVGYVMISFSATNALCSVLYGKISQYTGRIALYMLGTGIHVSCVIALLLWKPHPHQLAMFFVFSGLWGMADAVWQTQNNVMAVPSWPSTGKASLSSGIAPCTLGAGVRGRRPLQGALSQDGEMDVQLLEQKCLQIPIITSKQAALGIGSCQFSGRIELGFLLVWETPGD
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2883498..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2900850)
location: region:2883498-2900850:1
so has part: feature:2883498-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2900850:1:exon

XP_005608194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2883498-2883584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2900579-2900850:1:exon

UNC93A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: UNC93A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein unc-93 homolog A isoform X1
translation: MESSLKNVLVVSFGFLLLFTAFGGLQNLQSSLYREEGLGVAALSTIYGAVLVSSMFLPSVLIKKLGCKWSIVISMCCYVAFSLGNFYASWYTLIPTSIMLGLGAAPLWSAHCTYLTIMGNTHAEEAGKIGKNVVNQYFGIFFLIFQSSGVWGNLISSLVFGQKPTQGAIPEENLLSCGASDCLMATASTNSTQSPSQELIYTLLGIYTGSGVLAVLLVATFLQPIKDVQEKSKGEEKSSSFWSTLLSTFKLLRDKRLCLLILLPVYSGFQQAFLSGDYTRSYVTCALGIQFVGYVMISFSATNALCSVLYGKISQYTGRIALYMLGTGIHVSCVIALLLWKPHPHQLAMFFVFSGLWGMADAVWQTQNNVMAVPSWPSTGKASLSSGIAPCTLGAGVRGRRPLQGALSQDGEMDVQLLEQKCLQIPIITSKQAALGIGSCQFSGRIELGFLLVWETPGD
SIO_010081: UNC93A
subclass of: SO_0000673
so part of: UNC93A
location: join(2883498..2883584,2888980..2889161,2890132..2890361,2891991..2892116,2897308..2897522,2899631..2899766,2900119..2900250,2900579..2900850)
location: region:2883498-2900850:1
so has part: feature:2883498-2883584:1:exon
so has part: feature:2888980-2889161:1:exon
so has part: feature:2890132-2890361:1:exon
so has part: feature:2891991-2892116:1:exon
so has part: feature:2897308-2897522:1:exon
so has part: feature:2899631-2899766:1:exon
so has part: feature:2900119-2900250:1:exon
so has part: feature:2900579-2900850:1:exon

XP_014593639.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2883498-2883584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2888980-2889161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2890132-2890361:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891991-2892116:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2897308-2897522:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2899631-2899766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2900119-2900250:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2900579-2900850:1:exon

TCP10L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: TCP10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2935873..2966631)
location: region:2935873-2966631:-1
so has part: feature:2935873-2966631:-1:exon
subclass of: SO_0000010

102149436
type: Gene
SIO_000068: ncbigene

position:2935873:-1
position: 2935873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966631:-1
position: 2966631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2935873-2966631:-1:exon

TCP10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: TCP10L2
product: t-complex 10 like 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_005608135.3
SIO_010081: TCP10L2
subclass of: SO_0000673
so part of: TCP10L2
location: complement(join(2935873..2937076,2938242..2938359,2947779..2947863,2951257..2951424,2953412..2953516,2954678..2954778,2956377..2956485,2957091..2957249,2958444..2958566,2961112..2961330,2964733..2964862,2966068..2966631))
location: region:2935873-2966631:-1
so has part: feature:2966068-2966631:-1:exon
so has part: feature:2964733-2964862:-1:exon
so has part: feature:2961112-2961330:-1:exon
so has part: feature:2958444-2958566:-1:exon
so has part: feature:2957091-2957249:-1:exon
so has part: feature:2956377-2956485:-1:exon
so has part: feature:2954678-2954778:-1:exon
so has part: feature:2953412-2953516:-1:exon
so has part: feature:2951257-2951424:-1:exon
so has part: feature:2947779-2947863:-1:exon
so has part: feature:2938242-2938359:-1:exon
so has part: feature:2935873-2937076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2966068-2966631:-1:exon

position:2966068:-1
position: 2966068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2964733-2964862:-1:exon

position:2964733:-1
position: 2964733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964862:-1
position: 2964862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2961112-2961330:-1:exon

position:2961112:-1
position: 2961112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2961330:-1
position: 2961330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2958444-2958566:-1:exon

position:2958444:-1
position: 2958444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2958566:-1
position: 2958566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2957091-2957249:-1:exon

position:2957091:-1
position: 2957091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2957249:-1
position: 2957249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2956377-2956485:-1:exon

position:2956377:-1
position: 2956377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2956485:-1
position: 2956485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2954678-2954778:-1:exon

position:2954678:-1
position: 2954678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2954778:-1
position: 2954778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2953412-2953516:-1:exon

position:2953412:-1
position: 2953412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2953516:-1
position: 2953516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2951257-2951424:-1:exon

position:2951257:-1
position: 2951257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2951424:-1
position: 2951424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2947779-2947863:-1:exon

position:2947779:-1
position: 2947779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2947863:-1
position: 2947863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2938242-2938359:-1:exon

position:2938242:-1
position: 2938242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2938359:-1
position: 2938359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2935873-2937076:-1:exon

position:2937076:-1
position: 2937076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCP10L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: TCP10L2
product: t-complex 10 like 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_005608134.3
SIO_010081: TCP10L2
subclass of: SO_0000673
so part of: TCP10L2
location: complement(join(2935873..2937076,2938242..2938359,2947779..2947863,2951257..2951424,2953412..2953516,2954678..2954778,2956377..2956557,2957091..2957249,2958444..2958566,2961112..2961330,2964733..2964862,2966068..2966631))
location: region:2935873-2966631:-1
so has part: feature:2966068-2966631:-1:exon
so has part: feature:2964733-2964862:-1:exon
so has part: feature:2961112-2961330:-1:exon
so has part: feature:2958444-2958566:-1:exon
so has part: feature:2957091-2957249:-1:exon
so has part: feature:2956377-2956557:-1:exon
so has part: feature:2954678-2954778:-1:exon
so has part: feature:2953412-2953516:-1:exon
so has part: feature:2951257-2951424:-1:exon
so has part: feature:2947779-2947863:-1:exon
so has part: feature:2938242-2938359:-1:exon
so has part: feature:2935873-2937076:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2966068-2966631:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2964733-2964862:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2961112-2961330:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2958444-2958566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2957091-2957249:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2956377-2956557:-1:exon

position:2956557:-1
position: 2956557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2954678-2954778:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2953412-2953516:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2951257-2951424:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2947779-2947863:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2938242-2938359:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2935873-2937076:-1:exon

TCP10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: TCP10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 10A homolog 2 isoform X2
translation: MLSAPLEAEEPAETGGPEDGRAGTTPQKVAGLSREDSQAQEMLRLQQQISELREVVRRQEAWWAAAHRRLQNQIDALLTQNLELLRDGPRASELQRLEAKKTHTASHPPRRKSDMLVSESNFGKTPPPTADEEIAPKHAGRQSHSATFVGQRPSSQNPISIKIERIDSGKRMSCGDGDKTLSRSLQVRSAMPTGRDIPSEDEPTVFEDEKAAHPSSQSLQKSNGRKSPVPAANVVLKEDEPAADGNDTSTSPSQSPVGSSPAQVQTDEFPGSSPNVAEPQNLPVEAVSSPNALQHVDTKIKKEEKAEEIQPPDGQVEQALSDSCKVINFSKGTEKDTSVDKKTTNTSAEKKTTVLRFLNGEVKKILPDQRVIYHHASAQTTHTIYPNGLEVVQFPNGLTEKFYPDGSKEIMFPDGTVKHLKDGQEEIVFPDGTTVSVERNGDKTIVFSNGQREIHTAQFKRREYPDGTSKTVYCNGHQETKYASGRVRIKDETGNIILDKK
SIO_010081: TCP10L2
subclass of: SO_0000673
so part of: TCP10L2
location: complement(join(2936887..2937076,2938242..2938359,2947779..2947863,2951257..2951424,2953412..2953516,2954678..2954778,2956377..2956485,2957091..2957249,2958444..2958566,2961112..2961330,2964733..2964861))
location: region:2936887-2964861:-1
so has part: feature:2964733-2964861:-1:exon
so has part: feature:2961112-2961330:-1:exon
so has part: feature:2958444-2958566:-1:exon
so has part: feature:2957091-2957249:-1:exon
so has part: feature:2956377-2956485:-1:exon
so has part: feature:2954678-2954778:-1:exon
so has part: feature:2953412-2953516:-1:exon
so has part: feature:2951257-2951424:-1:exon
so has part: feature:2947779-2947863:-1:exon
so has part: feature:2938242-2938359:-1:exon
so has part: feature:2936887-2937076:-1:exon

XP_005608192.2
type: Protein
SIO_000068: ncbiprotein

position:2936887:-1
position: 2936887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2964861:-1
position: 2964861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2964733-2964861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961112-2961330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2958444-2958566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2957091-2957249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956377-2956485:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2954678-2954778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953412-2953516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2951257-2951424:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2947779-2947863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2938242-2938359:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2936887-2937076:-1:exon

TCP10L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: TCP10L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: T-complex protein 10A homolog 2 isoform X1
translation: MLSAPLEAEEPAETGGPEDGRAGTTPQKVAGLSREDSQAQEMLRLQQQISELREVVRRQEAWWAAAHRRLQNQIDALLTQNLELLRDGPRASELQRLEAKKTHTASHPPRRKSDMLVSESNFGKTPPPTADEEIAPKHAGRQSHSATFVGQRPSSQNPISIKIERIDSGKRMSCGDGDKTLSRSLQVRSAMPTGRDIPSEDEPTVFEDEKLPVFDLEALQLKGQCQVCDCHCPQAAHPSSQSLQKSNGRKSPVPAANVVLKEDEPAADGNDTSTSPSQSPVGSSPAQVQTDEFPGSSPNVAEPQNLPVEAVSSPNALQHVDTKIKKEEKAEEIQPPDGQVEQALSDSCKVINFSKGTEKDTSVDKKTTNTSAEKKTTVLRFLNGEVKKILPDQRVIYHHASAQTTHTIYPNGLEVVQFPNGLTEKFYPDGSKEIMFPDGTVKHLKDGQEEIVFPDGTTVSVERNGDKTIVFSNGQREIHTAQFKRREYPDGTSKTVYCNGHQETKYASGRVRIKDETGNIILDKK
SIO_010081: TCP10L2
subclass of: SO_0000673
so part of: TCP10L2
location: complement(join(2936887..2937076,2938242..2938359,2947779..2947863,2951257..2951424,2953412..2953516,2954678..2954778,2956377..2956557,2957091..2957249,2958444..2958566,2961112..2961330,2964733..2964861))
location: region:2936887-2964861:-1
so has part: feature:2964733-2964861:-1:exon
so has part: feature:2961112-2961330:-1:exon
so has part: feature:2958444-2958566:-1:exon
so has part: feature:2957091-2957249:-1:exon
so has part: feature:2956377-2956557:-1:exon
so has part: feature:2954678-2954778:-1:exon
so has part: feature:2953412-2953516:-1:exon
so has part: feature:2951257-2951424:-1:exon
so has part: feature:2947779-2947863:-1:exon
so has part: feature:2938242-2938359:-1:exon
so has part: feature:2936887-2937076:-1:exon

XP_005608191.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2964733-2964861:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2961112-2961330:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2958444-2958566:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2957091-2957249:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2956377-2956557:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2954678-2954778:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2953412-2953516:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2951257-2951424:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2947779-2947863:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2938242-2938359:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2936887-2937076:-1:exon

GPR31
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: GPR31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2972843..2976015
location: region:2972843-2976015:1
so has part: feature:2972843-2976015:1:exon
subclass of: SO_0000010

100055116
type: Gene
SIO_000068: ncbigene

position:2972843:1
position: 2972843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2976015:1
position: 2976015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2972843-2976015:1:exon

GPR31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: GPR31
product: G protein-coupled receptor 31
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_005608133.3
SIO_010081: GPR31
subclass of: SO_0000673
so part of: GPR31
location: 2972843..2976015
location: region:2972843-2976015:1
so has part: feature:2972843-2976015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2972843-2976015:1:exon

GPR31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: GPR31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor
translation: MLVLHISLLRKCRTYIFCGTGKIFFLSFCVKEQRAYPEVPGLCSWLPPLSRLQPLTRSVMPLARSVMPLANCSVHSAAVEGSLAVLLVLECGLGLVGNAIALWTFCFRLKVWKPYAVYLFNLVIADLLLTLCLPFHAASYLTHKTWSLGLSACQTLIFLRALSRGVGVAFLTAVALDRYLRVVHPRLKVNLLSLRAAWGISVLVWLLMAALSHQSLFISEAACPTFEPQGDFSFSVIWQKVLFLLQIILPFGLILFCNARIIRILQKRLRDPDKQPKLQRAQALVAVVVVLFALCFLPSFVARILLTIFRRSDSCRVRRALEHLSDVTSSLTYLQSVLNPVVYCFSNPTFRLSYRKVFYTLRGRGQEAEATCCDLKDSYS
SIO_010081: GPR31
subclass of: SO_0000673
so part of: GPR31
location: 2973304..2974446
location: region:2973304-2974446:1
so has part: feature:2973304-2974446:1:exon

XP_005608190.2
type: Protein
SIO_000068: ncbiprotein

position:2973304:1
position: 2973304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2974446:1
position: 2974446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2973304-2974446:1:exon

CCR6
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: CCR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2987288..3018480)
location: region:2987288-3018480:-1
so has part: feature:2987288-3018480:-1:exon
subclass of: SO_0000010

100055159
type: Gene
SIO_000068: ncbigene

position:2987288:-1
position: 2987288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3018480:-1
position: 3018480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2987288-3018480:-1:exon

CCR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: CCR6
product: C-C motif chemokine receptor 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_001489474.6
SIO_010081: CCR6
subclass of: SO_0000673
so part of: CCR6
location: complement(join(2987288..2989790,2989890..2989990,3018237..3018480))
location: region:2987288-3018480:-1
so has part: feature:3018237-3018480:-1:exon
so has part: feature:2989890-2989990:-1:exon
so has part: feature:2987288-2989790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3018237-3018480:-1:exon

position:3018237:-1
position: 3018237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2989890-2989990:-1:exon

position:2989890:-1
position: 2989890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989990:-1
position: 2989990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2987288-2989790:-1:exon

position:2989790:-1
position: 2989790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: CCR6
product: C-C motif chemokine receptor 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_005608132.3
SIO_010081: CCR6
subclass of: SO_0000673
so part of: CCR6
location: complement(join(2987288..2989790,2989890..2989990,3005759..3005863,3018237..3018480))
location: region:2987288-3018480:-1
so has part: feature:3018237-3018480:-1:exon
so has part: feature:3005759-3005863:-1:exon
so has part: feature:2989890-2989990:-1:exon
so has part: feature:2987288-2989790:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3018237-3018480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3005759-3005863:-1:exon

position:3005759:-1
position: 3005759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3005863:-1
position: 3005863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2989890-2989990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2987288-2989790:-1:exon

CCR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: CCR6
product: C-C motif chemokine receptor 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_023632933.1
SIO_010081: CCR6
subclass of: SO_0000673
so part of: CCR6
location: complement(join(2987288..2989790,2989890..2989990,3005759..3005863,3015323..3015421))
location: region:2987288-3015421:-1
so has part: feature:3015323-3015421:-1:exon
so has part: feature:3005759-3005863:-1:exon
so has part: feature:2989890-2989990:-1:exon
so has part: feature:2987288-2989790:-1:exon

position:3015421:-1
position: 3015421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3015323-3015421:-1:exon

position:3015323:-1
position: 3015323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3005759-3005863:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2989890-2989990:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2987288-2989790:-1:exon

CCR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: CCR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C chemokine receptor type 6
translation: MSGELMNFSNSYELSEDYFGSANNSDYPFEEDTLCSLQEVRKFSGLFLPIAYSLICVSGLLGNILVVVTFAFYKKAKSMTDVYLLNMAIADILFVLTLPFWAVYHATGEWTFSNAMCKLIRGIYTINFNCGMLLLTFISIDRYVAIVQATKSFRLRSRTLAHRKLICFVVWAVSILISGWTFTFNEKYNVQDSQVCEPRYPPASEPIKWKLLMLGLQLLFGFFIPLVFMIFCYMFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNVVLLVTAANLGKINRSCSSEKLIGYTNNITEVLAFLHCCLNPVLYAFIGQKFRNYFLKIMKDLWCVRRKQTSQGFSCSRLYSETFISRQNSETIDNDNASSFTM
SIO_010081: CCR6
subclass of: SO_0000673
so part of: CCR6
location: complement(join(2988675..2989790,2989890..2989898))
location: region:2988675-2989898:-1
so has part: feature:2989890-2989898:-1:exon
so has part: feature:2988675-2989790:-1:exon

XP_023488701.1
type: Protein
SIO_000068: ncbiprotein

position:2988675:-1
position: 2988675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989898:-1
position: 2989898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2989890-2989898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2988675-2989790:-1:exon

CCR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: CCR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C chemokine receptor type 6
translation: MSGELMNFSNSYELSEDYFGSANNSDYPFEEDTLCSLQEVRKFSGLFLPIAYSLICVSGLLGNILVVVTFAFYKKAKSMTDVYLLNMAIADILFVLTLPFWAVYHATGEWTFSNAMCKLIRGIYTINFNCGMLLLTFISIDRYVAIVQATKSFRLRSRTLAHRKLICFVVWAVSILISGWTFTFNEKYNVQDSQVCEPRYPPASEPIKWKLLMLGLQLLFGFFIPLVFMIFCYMFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNVVLLVTAANLGKINRSCSSEKLIGYTNNITEVLAFLHCCLNPVLYAFIGQKFRNYFLKIMKDLWCVRRKQTSQGFSCSRLYSETFISRQNSETIDNDNASSFTM
SIO_010081: CCR6
subclass of: SO_0000673
so part of: CCR6
location: complement(join(2988675..2989790,2989890..2989898))
location: region:2988675-2989898:-1
so has part: feature:2989890-2989898:-1:exon
so has part: feature:2988675-2989790:-1:exon

XP_001489524.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2989890-2989898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2988675-2989790:-1:exon

CCR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: CCR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: C-C chemokine receptor type 6
translation: MSGELMNFSNSYELSEDYFGSANNSDYPFEEDTLCSLQEVRKFSGLFLPIAYSLICVSGLLGNILVVVTFAFYKKAKSMTDVYLLNMAIADILFVLTLPFWAVYHATGEWTFSNAMCKLIRGIYTINFNCGMLLLTFISIDRYVAIVQATKSFRLRSRTLAHRKLICFVVWAVSILISGWTFTFNEKYNVQDSQVCEPRYPPASEPIKWKLLMLGLQLLFGFFIPLVFMIFCYMFIVKTLVQAQNSKRHKAIRVIIAVVLVFLACQIPHNVVLLVTAANLGKINRSCSSEKLIGYTNNITEVLAFLHCCLNPVLYAFIGQKFRNYFLKIMKDLWCVRRKQTSQGFSCSRLYSETFISRQNSETIDNDNASSFTM
SIO_010081: CCR6
subclass of: SO_0000673
so part of: CCR6
location: complement(join(2988675..2989790,2989890..2989898))
location: region:2988675-2989898:-1
so has part: feature:2989890-2989898:-1:exon
so has part: feature:2988675-2989790:-1:exon

XP_005608189.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2989890-2989898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2988675-2989790:-1:exon

LOC102149256
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: LOC102149256
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3049626..3061477)
location: region:3049626-3061477:-1
so has part: feature:3049626-3061477:-1:exon
subclass of: SO_0000011

102149256
type: Gene
SIO_000068: ncbigene

position:3049626:-1
position: 3049626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3061477:-1
position: 3061477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049626-3061477:-1:exon

LOC102149256
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9796
nc RNA class: lncRNA
gene: LOC102149256
product: uncharacterized LOC102149256
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_289983.2
SIO_010081: LOC102149256
subclass of: SO_0000673
so part of: LOC102149256
location: complement(join(3049626..3053361,3053729..3053814,3061131..3061477))
location: region:3049626-3061477:-1
so has part: feature:3061131-3061477:-1:exon
so has part: feature:3053729-3053814:-1:exon
so has part: feature:3049626-3053361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3061131-3061477:-1:exon

position:3061131:-1
position: 3061131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3053729-3053814:-1:exon

position:3053729:-1
position: 3053729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3053814:-1
position: 3053814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3049626-3053361:-1:exon

position:3053361:-1
position: 3053361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGFR1OP
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: FGFR1OP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3073278..3104730)
location: region:3073278-3104730:-1
so has part: feature:3073278-3104730:-1:exon
subclass of: SO_0000010

100055208
type: Gene
SIO_000068: ncbigene

position:3073278:-1
position: 3073278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3104730:-1
position: 3104730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3073278-3104730:-1:exon

FGFR1OP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FGFR1OP
product: FGFR1 oncogene partner, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 121 samples with support for all annotated introns
transcript id: XM_023633133.1
SIO_010081: FGFR1OP
subclass of: SO_0000673
so part of: FGFR1OP
location: complement(join(3073278..3075337,3076330..3076426,3077302..3077341,3081399..3081467,3082881..3082993,3085226..3085452,3092439..3092498,3094747..3094827,3099387..3099524,3099974..3100062,3100522..3100576,3103346..3103399,3104535..3104730))
location: region:3073278-3104730:-1
so has part: feature:3104535-3104730:-1:exon
so has part: feature:3103346-3103399:-1:exon
so has part: feature:3100522-3100576:-1:exon
so has part: feature:3099974-3100062:-1:exon
so has part: feature:3099387-3099524:-1:exon
so has part: feature:3094747-3094827:-1:exon
so has part: feature:3092439-3092498:-1:exon
so has part: feature:3085226-3085452:-1:exon
so has part: feature:3082881-3082993:-1:exon
so has part: feature:3081399-3081467:-1:exon
so has part: feature:3077302-3077341:-1:exon
so has part: feature:3076330-3076426:-1:exon
so has part: feature:3073278-3075337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3104535-3104730:-1:exon

position:3104535:-1
position: 3104535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3103346-3103399:-1:exon

position:3103346:-1
position: 3103346
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3103399:-1
position: 3103399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3100522-3100576:-1:exon

position:3100522:-1
position: 3100522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3100576:-1
position: 3100576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3099974-3100062:-1:exon

position:3099974:-1
position: 3099974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3100062:-1
position: 3100062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3099387-3099524:-1:exon

position:3099387:-1
position: 3099387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3099524:-1
position: 3099524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3094747-3094827:-1:exon

position:3094747:-1
position: 3094747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3094827:-1
position: 3094827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3092439-3092498:-1:exon

position:3092439:-1
position: 3092439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3092498:-1
position: 3092498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3085226-3085452:-1:exon

position:3085226:-1
position: 3085226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3085452:-1
position: 3085452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3082881-3082993:-1:exon

position:3082881:-1
position: 3082881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3082993:-1
position: 3082993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3081399-3081467:-1:exon

position:3081399:-1
position: 3081399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081467:-1
position: 3081467
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3077302-3077341:-1:exon

position:3077302:-1
position: 3077302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3077341:-1
position: 3077341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3076330-3076426:-1:exon

position:3076330:-1
position: 3076330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3076426:-1
position: 3076426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3073278-3075337:-1:exon

position:3075337:-1
position: 3075337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGFR1OP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: FGFR1OP
product: FGFR1 oncogene partner, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 163 samples with support for all annotated introns
transcript id: XM_023633134.1
SIO_010081: FGFR1OP
subclass of: SO_0000673
so part of: FGFR1OP
location: complement(join(3073278..3075337,3076330..3076426,3077302..3077341,3081399..3081467,3082881..3082993,3085226..3085452,3094747..3094827,3099387..3099524,3099974..3100062,3100522..3100576,3103346..3103399,3104535..3104729))
location: region:3073278-3104729:-1
so has part: feature:3104535-3104729:-1:exon
so has part: feature:3103346-3103399:-1:exon
so has part: feature:3100522-3100576:-1:exon
so has part: feature:3099974-3100062:-1:exon
so has part: feature:3099387-3099524:-1:exon
so has part: feature:3094747-3094827:-1:exon
so has part: feature:3085226-3085452:-1:exon
so has part: feature:3082881-3082993:-1:exon
so has part: feature:3081399-3081467:-1:exon
so has part: feature:3077302-3077341:-1:exon
so has part: feature:3076330-3076426:-1:exon
so has part: feature:3073278-3075337:-1:exon

position:3104729:-1
position: 3104729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3104535-3104729:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3103346-3103399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3100522-3100576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099974-3100062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099387-3099524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3094747-3094827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3085226-3085452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3082881-3082993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3081399-3081467:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3077302-3077341:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3076330-3076426:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3073278-3075337:-1:exon

FGFR1OP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FGFR1OP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FGFR1 oncogene partner isoform X2
translation: MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDGRLVASLVAEFLQFFHLDFTLAVFQPETSTFQGLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPANGEGALELSDIHSPPKSPEGKASAPTVPSKRASSDASQSDTSTSSSEPKSKSSLHLLGHETKIGSFLSNKSLDVKDKAGLCPDEDDMEGDSFFDDPIPKPEKTYGWRSEPSKPVGSLASLSDAPPLKSGLSSLAGAPSLKDSESKKGNTVLKDLKLVNDKIGSLGLGTGEEDDYADDFNSTSHRSEKSELSIGEEIEEDLSAEIEDVNTSDKLDDLTQDLTVSQLSDVADYLEDVA
SIO_010081: FGFR1OP
subclass of: SO_0000673
so part of: FGFR1OP
location: complement(join(3075263..3075337,3076330..3076426,3077302..3077341,3081399..3081467,3082881..3082993,3085226..3085452,3094747..3094827,3099387..3099524,3099974..3100062,3100522..3100576,3103346..3103399,3104535..3104636))
location: region:3075263-3104636:-1
so has part: feature:3104535-3104636:-1:exon
so has part: feature:3103346-3103399:-1:exon
so has part: feature:3100522-3100576:-1:exon
so has part: feature:3099974-3100062:-1:exon
so has part: feature:3099387-3099524:-1:exon
so has part: feature:3094747-3094827:-1:exon
so has part: feature:3085226-3085452:-1:exon
so has part: feature:3082881-3082993:-1:exon
so has part: feature:3081399-3081467:-1:exon
so has part: feature:3077302-3077341:-1:exon
so has part: feature:3076330-3076426:-1:exon
so has part: feature:3075263-3075337:-1:exon

XP_023488902.1
type: Protein
SIO_000068: ncbiprotein

position:3075263:-1
position: 3075263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3104636:-1
position: 3104636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3104535-3104636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3103346-3103399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3100522-3100576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099974-3100062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099387-3099524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3094747-3094827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3085226-3085452:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3082881-3082993:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3081399-3081467:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3077302-3077341:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3076330-3076426:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3075263-3075337:-1:exon

FGFR1OP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: FGFR1OP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FGFR1 oncogene partner isoform X1
translation: MAATAAAVVAEEDTELRDLLVQTLENSGVLNRIKAELRAAVFLALEEQEKVENKTPLVNESLKKFLNTKDGRLVASLVAEFLQFFHLDFTLAVFQPETSTFQGLEGRENLARDLGIIEAEGTVGGPLLLEVIRRCQQKEKGPANGEGALELSDIHSPPKSPEGKASAPTVPSKIPRYRGQGKKKTSGQKPGAKRASSDASQSDTSTSSSEPKSKSSLHLLGHETKIGSFLSNKSLDVKDKAGLCPDEDDMEGDSFFDDPIPKPEKTYGWRSEPSKPVGSLASLSDAPPLKSGLSSLAGAPSLKDSESKKGNTVLKDLKLVNDKIGSLGLGTGEEDDYADDFNSTSHRSEKSELSIGEEIEEDLSAEIEDVNTSDKLDDLTQDLTVSQLSDVADYLEDVA
SIO_010081: FGFR1OP
subclass of: SO_0000673
so part of: FGFR1OP
location: complement(join(3075263..3075337,3076330..3076426,3077302..3077341,3081399..3081467,3082881..3082993,3085226..3085452,3092439..3092498,3094747..3094827,3099387..3099524,3099974..3100062,3100522..3100576,3103346..3103399,3104535..3104636))
location: region:3075263-3104636:-1
so has part: feature:3104535-3104636:-1:exon
so has part: feature:3103346-3103399:-1:exon
so has part: feature:3100522-3100576:-1:exon
so has part: feature:3099974-3100062:-1:exon
so has part: feature:3099387-3099524:-1:exon
so has part: feature:3094747-3094827:-1:exon
so has part: feature:3092439-3092498:-1:exon
so has part: feature:3085226-3085452:-1:exon
so has part: feature:3082881-3082993:-1:exon
so has part: feature:3081399-3081467:-1:exon
so has part: feature:3077302-3077341:-1:exon
so has part: feature:3076330-3076426:-1:exon
so has part: feature:3075263-3075337:-1:exon

XP_023488901.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3104535-3104636:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3103346-3103399:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3100522-3100576:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3099974-3100062:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3099387-3099524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3094747-3094827:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3092439-3092498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3085226-3085452:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3082881-3082993:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3081399-3081467:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3077302-3077341:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3076330-3076426:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3075263-3075337:-1:exon

RNASET2
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: RNASET2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3131350..3158114
location: region:3131350-3158114:1
so has part: feature:3131350-3158114:1:exon
subclass of: SO_0000010

100055381
type: Gene
SIO_000068: ncbigene

position:3131350:1
position: 3131350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3158114:1
position: 3158114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3131350-3158114:1:exon

RNASET2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: RNASET2
product: ribonuclease T2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_023632905.1
SIO_010081: RNASET2
subclass of: SO_0000673
so part of: RNASET2
location: join(3131350..3131476,3139041..3139140,3141652..3141712,3144952..3145007,3146616..3146808,3148310..3148350,3149450..3149590,3153572..3153617,3155032..3155106,3156849..3158114)
location: region:3131350-3158114:1
so has part: feature:3131350-3131476:1:exon
so has part: feature:3139041-3139140:1:exon
so has part: feature:3141652-3141712:1:exon
so has part: feature:3144952-3145007:1:exon
so has part: feature:3146616-3146808:1:exon
so has part: feature:3148310-3148350:1:exon
so has part: feature:3149450-3149590:1:exon
so has part: feature:3153572-3153617:1:exon
so has part: feature:3155032-3155106:1:exon
so has part: feature:3156849-3158114:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3131350-3131476:1:exon

position:3131476:1
position: 3131476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3139041-3139140:1:exon

position:3139041:1
position: 3139041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3139140:1
position: 3139140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3141652-3141712:1:exon

position:3141652:1
position: 3141652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3141712:1
position: 3141712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3144952-3145007:1:exon

position:3144952:1
position: 3144952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3145007:1
position: 3145007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3146616-3146808:1:exon

position:3146616:1
position: 3146616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3146808:1
position: 3146808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3148310-3148350:1:exon

position:3148310:1
position: 3148310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3148350:1
position: 3148350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3149450-3149590:1:exon

position:3149450:1
position: 3149450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3149590:1
position: 3149590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3153572-3153617:1:exon

position:3153572:1
position: 3153572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3153617:1
position: 3153617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3155032-3155106:1:exon

position:3155032:1
position: 3155032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3155106:1
position: 3155106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3156849-3158114:1:exon

position:3156849:1
position: 3156849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNASET2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: RNASET2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease T2
translation: MRPRAPRGVLPGALGLALCCLCGALGPWRSGDHGWKKLIMVHHWPTTVCKEIENACSDPPDYWTIHGLWPDKSEECNRSWHFNLEEIKVLTFHSTPTAESGARLTLVFAGVSSKSGCKASRSGMCSPGWNSWGAVASELTGPRSVGRDFFKKPSCRKHEWEKHGTCAAQLDVLNSQKKYFGKSLDLYKELSLNSMLQKLGIKPSINYYQISDIKDALASVYGVIPKVQCLPPRQGEEVQTIGQIELCLTKDLQLRNCTEHGEPRSRRWGDAWPARATAEGPGLEVCEDGPAFYPPPKETNH
SIO_010081: RNASET2
subclass of: SO_0000673
so part of: RNASET2
location: join(3139052..3139140,3141652..3141712,3144952..3145007,3146616..3146808,3148310..3148350,3149450..3149590,3153572..3153617,3155032..3155106,3156849..3157052)
location: region:3139052-3157052:1
so has part: feature:3139052-3139140:1:exon
so has part: feature:3141652-3141712:1:exon
so has part: feature:3144952-3145007:1:exon
so has part: feature:3146616-3146808:1:exon
so has part: feature:3148310-3148350:1:exon
so has part: feature:3149450-3149590:1:exon
so has part: feature:3153572-3153617:1:exon
so has part: feature:3155032-3155106:1:exon
so has part: feature:3156849-3157052:1:exon

XP_023488673.1
type: Protein
SIO_000068: ncbiprotein

position:3139052:1
position: 3139052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3157052:1
position: 3157052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3139052-3139140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3141652-3141712:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3144952-3145007:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3146616-3146808:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3148310-3148350:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3149450-3149590:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3153572-3153617:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3155032-3155106:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3156849-3157052:1:exon

RPS6KA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9796
gene: RPS6KA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3195350..3565406
location: region:3195350-3565406:1
so has part: feature:3195350-3565406:1:exon
subclass of: SO_0000010

100050176
type: Gene
SIO_000068: ncbigene

position:3195350:1
position: 3195350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3565406:1
position: 3565406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3195350-3565406:1:exon

RPS6KA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: RPS6KA2
product: ribosomal protein S6 kinase A2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023633075.1
SIO_010081: RPS6KA2
subclass of: SO_0000673
so part of: RPS6KA2
location: join(3195350..3195741,3199437..3199496,3254554..3254604,3460264..3460380,3468613..3468694,3484333..3484413,3487259..3487338,3490352..3490458,3493624..3493661,3496342..3496484,3504030..3504100,3505794..3505882,3516462..3516526,3527333..3527435,3533689..3533819,3535125..3535250,3548126..3548215,3550098..3550256,3551915..3552076,3554916..3554992,3556572..3556689,3559786..3559923,3562010..3565406)
location: region:3195350-3565406:1
so has part: feature:3195350-3195741:1:exon
so has part: feature:3199437-3199496:1:exon
so has part: feature:3254554-3254604:1:exon
so has part: feature:3460264-3460380:1:exon
so has part: feature:3468613-3468694:1:exon
so has part: feature:3484333-3484413:1:exon
so has part: feature:3487259-3487338:1:exon
so has part: feature:3490352-3490458:1:exon
so has part: feature:3493624-3493661:1:exon
so has part: feature:3496342-3496484:1:exon
so has part: feature:3504030-3504100:1:exon
so has part: feature:3505794-3505882:1:exon
so has part: feature:3516462-3516526:1:exon
so has part: feature:3527333-3527435:1:exon
so has part: feature:3533689-3533819:1:exon
so has part: feature:3535125-3535250:1:exon
so has part: feature:3548126-3548215:1:exon
so has part: feature:3550098-3550256:1:exon
so has part: feature:3551915-3552076:1:exon
so has part: feature:3554916-3554992:1:exon
so has part: feature:3556572-3556689:1:exon
so has part: feature:3559786-3559923:1:exon
so has part: feature:3562010-3565406:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3195350-3195741:1:exon

position:3195741:1
position: 3195741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3199437-3199496:1:exon

position:3199437:1
position: 3199437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3199496:1
position: 3199496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3254554-3254604:1:exon

position:3254554:1
position: 3254554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3254604:1
position: 3254604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3460264-3460380:1:exon

position:3460264:1
position: 3460264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3460380:1
position: 3460380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3468613-3468694:1:exon

position:3468613:1
position: 3468613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3468694:1
position: 3468694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3484333-3484413:1:exon

position:3484333:1
position: 3484333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3484413:1
position: 3484413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3487259-3487338:1:exon

position:3487259:1
position: 3487259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3487338:1
position: 3487338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3490352-3490458:1:exon

position:3490352:1
position: 3490352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3490458:1
position: 3490458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3493624-3493661:1:exon

position:3493624:1
position: 3493624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3493661:1
position: 3493661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3496342-3496484:1:exon

position:3496342:1
position: 3496342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3496484:1
position: 3496484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3504030-3504100:1:exon

position:3504030:1
position: 3504030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3504100:1
position: 3504100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3505794-3505882:1:exon

position:3505794:1
position: 3505794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3505882:1
position: 3505882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3516462-3516526:1:exon

position:3516462:1
position: 3516462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3516526:1
position: 3516526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3527333-3527435:1:exon

position:3527333:1
position: 3527333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3527435:1
position: 3527435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3533689-3533819:1:exon

position:3533689:1
position: 3533689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3533819:1
position: 3533819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3535125-3535250:1:exon

position:3535125:1
position: 3535125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3535250:1
position: 3535250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3548126-3548215:1:exon

position:3548126:1
position: 3548126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3548215:1
position: 3548215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3550098-3550256:1:exon

position:3550098:1
position: 3550098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3550256:1
position: 3550256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3551915-3552076:1:exon

position:3551915:1
position: 3551915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3552076:1
position: 3552076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3554916-3554992:1:exon

position:3554916:1
position: 3554916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554992:1
position: 3554992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3556572-3556689:1:exon

position:3556572:1
position: 3556572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3556689:1
position: 3556689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3559786-3559923:1:exon

position:3559786:1
position: 3559786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3559923:1
position: 3559923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3562010-3565406:1:exon

position:3562010:1
position: 3562010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RPS6KA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: RPS6KA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-2 isoform X1
translation: MPIAHLLELWKKIEVEPMEIETTEEDLNLDAEPAIEDTAEEGKSDVTSSETKPAAPIEEEGIVKEIDISHHVKEGFEKADPSQFELLKVLGQGSYGKVFLVRKVKGSDAGQLYAMKVLKKATLKVRDRVRSKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHGLGIIYRDLKPENILLDEEGHIKITDFGLSKEAIDHDKRAYSFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMALILKAKLGMPQFLSLEAQSLLRALFKRNPCNRLGAGIDGVEEIKRHPFFVTIDWNKLYRKEVKPPFKPAVGRPEDTFHFDPEFTARTPTDSPGVPPSANAHHLFRGFSFVASSLVQEPSQQDQHKTTVPPIVQQLHGNNIHFTDGYEIKEDIGVGSYSVCKRCVHKATDAEYAVKIIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKFVYLVMELMRGGELLDRILRQRYFSEREASDVLCTITKTMDYLHSQGVVHRDLKPSNILYMDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDAACDIWSLGILLYTMLAGFTPFANGPDDTPEEILARIGSGKYALSGGNWDSISDAAKDVVSKMLHVDPQQRLTAVQVLKHPWIVNREYLSQNQLSRQDVHLVKGAMAATYFALNRTPQAPRLEPVLSSSLAQRRGMKRLTSTRL
SIO_010081: RPS6KA2
subclass of: SO_0000673
so part of: RPS6KA2
location: join(3195679..3195741,3199437..3199496,3254554..3254604,3460264..3460380,3468613..3468694,3484333..3484413,3487259..3487338,3490352..3490458,3493624..3493661,3496342..3496484,3504030..3504100,3505794..3505882,3516462..3516526,3527333..3527435,3533689..3533819,3535125..3535250,3548126..3548215,3550098..3550256,3551915..3552076,3554916..3554992,3556572..3556689,3559786..3559923,3562010..3562135)
location: region:3195679-3562135:1
so has part: feature:3195679-3195741:1:exon
so has part: feature:3199437-3199496:1:exon
so has part: feature:3254554-3254604:1:exon
so has part: feature:3460264-3460380:1:exon
so has part: feature:3468613-3468694:1:exon
so has part: feature:3484333-3484413:1:exon
so has part: feature:3487259-3487338:1:exon
so has part: feature:3490352-3490458:1:exon
so has part: feature:3493624-3493661:1:exon
so has part: feature:3496342-3496484:1:exon
so has part: feature:3504030-3504100:1:exon
so has part: feature:3505794-3505882:1:exon
so has part: feature:3516462-3516526:1:exon
so has part: feature:3527333-3527435:1:exon
so has part: feature:3533689-3533819:1:exon
so has part: feature:3535125-3535250:1:exon
so has part: feature:3548126-3548215:1:exon
so has part: feature:3550098-3550256:1:exon
so has part: feature:3551915-3552076:1:exon
so has part: feature:3554916-3554992:1:exon
so has part: feature:3556572-3556689:1:exon
so has part: feature:3559786-3559923:1:exon
so has part: feature:3562010-3562135:1:exon

XP_023488843.1
type: Protein
SIO_000068: ncbiprotein

position:3195679:1
position: 3195679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562135:1
position: 3562135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3195679-3195741:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3199437-3199496:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3254554-3254604:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3460264-3460380:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3468613-3468694:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3484333-3484413:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3487259-3487338:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3490352-3490458:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3493624-3493661:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3496342-3496484:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3504030-3504100:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3505794-3505882:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3516462-3516526:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3527333-3527435:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3533689-3533819:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3535125-3535250:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3548126-3548215:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3550098-3550256:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3551915-3552076:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3554916-3554992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3556572-3556689:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3559786-3559923:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3562010-3562135:1:exon

RPS6KA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: RPS6KA2
product: ribosomal protein S6 kinase A2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_023633077.1
SIO_010081: RPS6KA2
subclass of: SO_0000673
so part of: RPS6KA2
location: join(3254334..3254461,3254554..3254604,3460264..3460380,3468613..3468694,3484333..3484413,3487259..3487338,3490352..3490458,3493624..3493661,3496342..3496484,3504030..3504100,3505794..3505882,3516462..3516526,3527333..3527435,3533689..3533819,3535125..3535250,3548126..3548215,3550098..3550256,3551915..3552076,3554916..3554992,3556572..3556689,3559786..3559923,3562010..3565406)
location: region:3254334-3565406:1
so has part: feature:3254334-3254461:1:exon
so has part: feature:3254554-3254604:1:exon
so has part: feature:3460264-3460380:1:exon
so has part: feature:3468613-3468694:1:exon
so has part: feature:3484333-3484413:1:exon
so has part: feature:3487259-3487338:1:exon
so has part: feature:3490352-3490458:1:exon
so has part: feature:3493624-3493661:1:exon
so has part: feature:3496342-3496484:1:exon
so has part: feature:3504030-3504100:1:exon
so has part: feature:3505794-3505882:1:exon
so has part: feature:3516462-3516526:1:exon
so has part: feature:3527333-3527435:1:exon
so has part: feature:3533689-3533819:1:exon
so has part: feature:3535125-3535250:1:exon
so has part: feature:3548126-3548215:1:exon
so has part: feature:3550098-3550256:1:exon
so has part: feature:3551915-3552076:1:exon
so has part: feature:3554916-3554992:1:exon
so has part: feature:3556572-3556689:1:exon
so has part: feature:3559786-3559923:1:exon
so has part: feature:3562010-3565406:1:exon

position:3254334:1
position: 3254334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3254334-3254461:1:exon

position:3254461:1
position: 3254461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3254554-3254604:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3460264-3460380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3468613-3468694:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3484333-3484413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3487259-3487338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490352-3490458:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493624-3493661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3496342-3496484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3504030-3504100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3505794-3505882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3516462-3516526:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3527333-3527435:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3533689-3533819:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3535125-3535250:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3548126-3548215:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3550098-3550256:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3551915-3552076:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3554916-3554992:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3556572-3556689:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3559786-3559923:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3562010-3565406:1:exon

RPS6KA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: RPS6KA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-2 isoform X3
translation: MWRLMFRSKKFQVLGKSDVTSSETKPAAPIEEEGIVKEIDISHHVKEGFEKADPSQFELLKVLGQGSYGKVFLVRKVKGSDAGQLYAMKVLKKATLKVRDRVRSKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHGLGIIYRDLKPENILLDEEGHIKITDFGLSKEAIDHDKRAYSFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMALILKAKLGMPQFLSLEAQSLLRALFKRNPCNRLGAGIDGVEEIKRHPFFVTIDWNKLYRKEVKPPFKPAVGRPEDTFHFDPEFTARTPTDSPGVPPSANAHHLFRGFSFVASSLVQEPSQQDQHKTTVPPIVQQLHGNNIHFTDGYEIKEDIGVGSYSVCKRCVHKATDAEYAVKIIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKFVYLVMELMRGGELLDRILRQRYFSEREASDVLCTITKTMDYLHSQGVVHRDLKPSNILYMDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDAACDIWSLGILLYTMLAGFTPFANGPDDTPEEILARIGSGKYALSGGNWDSISDAAKDVVSKMLHVDPQQRLTAVQVLKHPWIVNREYLSQNQLSRQDVHLVKGAMAATYFALNRTPQAPRLEPVLSSSLAQRRGMKRLTSTRL
SIO_010081: RPS6KA2
subclass of: SO_0000673
so part of: RPS6KA2
location: join(3254420..3254461,3254554..3254604,3460264..3460380,3468613..3468694,3484333..3484413,3487259..3487338,3490352..3490458,3493624..3493661,3496342..3496484,3504030..3504100,3505794..3505882,3516462..3516526,3527333..3527435,3533689..3533819,3535125..3535250,3548126..3548215,3550098..3550256,3551915..3552076,3554916..3554992,3556572..3556689,3559786..3559923,3562010..3562135)
location: region:3254420-3562135:1
so has part: feature:3254420-3254461:1:exon
so has part: feature:3254554-3254604:1:exon
so has part: feature:3460264-3460380:1:exon
so has part: feature:3468613-3468694:1:exon
so has part: feature:3484333-3484413:1:exon
so has part: feature:3487259-3487338:1:exon
so has part: feature:3490352-3490458:1:exon
so has part: feature:3493624-3493661:1:exon
so has part: feature:3496342-3496484:1:exon
so has part: feature:3504030-3504100:1:exon
so has part: feature:3505794-3505882:1:exon
so has part: feature:3516462-3516526:1:exon
so has part: feature:3527333-3527435:1:exon
so has part: feature:3533689-3533819:1:exon
so has part: feature:3535125-3535250:1:exon
so has part: feature:3548126-3548215:1:exon
so has part: feature:3550098-3550256:1:exon
so has part: feature:3551915-3552076:1:exon
so has part: feature:3554916-3554992:1:exon
so has part: feature:3556572-3556689:1:exon
so has part: feature:3559786-3559923:1:exon
so has part: feature:3562010-3562135:1:exon

XP_023488845.1
type: Protein
SIO_000068: ncbiprotein

position:3254420:1
position: 3254420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3254420-3254461:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3254554-3254604:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3460264-3460380:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3468613-3468694:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3484333-3484413:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3487259-3487338:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3490352-3490458:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3493624-3493661:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3496342-3496484:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3504030-3504100:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3505794-3505882:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3516462-3516526:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3527333-3527435:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3533689-3533819:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3535125-3535250:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3548126-3548215:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3550098-3550256:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3551915-3552076:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3554916-3554992:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3556572-3556689:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3559786-3559923:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3562010-3562135:1:exon

RPS6KA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: RPS6KA2
product: ribosomal protein S6 kinase A2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023633079.1
SIO_010081: RPS6KA2
subclass of: SO_0000673
so part of: RPS6KA2
location: join(3266272..3266688,3460264..3460380,3468613..3468694,3484333..3484413,3487259..3487338,3490352..3490458,3493624..3493661,3496342..3496484,3504030..3504100,3505794..3505882,3516462..3516526,3527333..3527435,3533689..3533819,3535125..3535250,3548126..3548215,3550098..3550256,3551915..3552076,3554916..3554992,3556572..3556689,3559786..3559923,3562010..3565406)
location: region:3266272-3565406:1
so has part: feature:3266272-3266688:1:exon
so has part: feature:3460264-3460380:1:exon
so has part: feature:3468613-3468694:1:exon
so has part: feature:3484333-3484413:1:exon
so has part: feature:3487259-3487338:1:exon
so has part: feature:3490352-3490458:1:exon
so has part: feature:3493624-3493661:1:exon
so has part: feature:3496342-3496484:1:exon
so has part: feature:3504030-3504100:1:exon
so has part: feature:3505794-3505882:1:exon
so has part: feature:3516462-3516526:1:exon
so has part: feature:3527333-3527435:1:exon
so has part: feature:3533689-3533819:1:exon
so has part: feature:3535125-3535250:1:exon
so has part: feature:3548126-3548215:1:exon
so has part: feature:3550098-3550256:1:exon
so has part: feature:3551915-3552076:1:exon
so has part: feature:3554916-3554992:1:exon
so has part: feature:3556572-3556689:1:exon
so has part: feature:3559786-3559923:1:exon
so has part: feature:3562010-3565406:1:exon

position:3266272:1
position: 3266272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3266272-3266688:1:exon

position:3266688:1
position: 3266688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3460264-3460380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3468613-3468694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3484333-3484413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3487259-3487338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3490352-3490458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493624-3493661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496342-3496484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3504030-3504100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3505794-3505882:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3516462-3516526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3527333-3527435:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3533689-3533819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3535125-3535250:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3548126-3548215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3550098-3550256:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3551915-3552076:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3554916-3554992:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3556572-3556689:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3559786-3559923:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3562010-3565406:1:exon

RPS6KA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9796
gene: RPS6KA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein S6 kinase alpha-2 isoform X5
translation: MIRLPRRKLQKLFLRKEEGIVKEIDISHHVKEGFEKADPSQFELLKVLGQGSYGKVFLVRKVKGSDAGQLYAMKVLKKATLKVRDRVRSKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHGLGIIYRDLKPENILLDEEGHIKITDFGLSKEAIDHDKRAYSFCGTIEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMALILKAKLGMPQFLSLEAQSLLRALFKRNPCNRLGAGIDGVEEIKRHPFFVTIDWNKLYRKEVKPPFKPAVGRPEDTFHFDPEFTARTPTDSPGVPPSANAHHLFRGFSFVASSLVQEPSQQDQHKTTVPPIVQQLHGNNIHFTDGYEIKEDIGVGSYSVCKRCVHKATDAEYAVKIIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKFVYLVMELMRGGELLDRILRQRYFSEREASDVLCTITKTMDYLHSQGVVHRDLKPSNILYMDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDAACDIWSLGILLYTMLAGFTPFANGPDDTPEEILARIGSGKYALSGGNWDSISDAAKDVVSKMLHVDPQQRLTAVQVLKHPWIVNREYLSQNQLSRQDVHLVKGAMAATYFALNRTPQAPRLEPVLSSSLAQRRGMKRLTSTRL
SIO_010081: RPS6KA2
subclass of: SO_0000673
so part of: RPS6KA2
location: join(3266641..3266688,3460264..3460380,3468613..3468694,3484333..3484413,3487259..3487338,3490352..3490458,3493624..3493661,3496342..3496484,3504030..3504100,3505794..3505882,3516462..3516526,3527333..3527435,3533689..3533819,3535125..3535250,3548126..3548215,3550098..3550256,3551915..3552076,3554916..3554992,3556572..3556689,3559786..3559923,3562010..3562135)
location: region:3266641-3562135:1
so has part: feature:3266641-3266688:1:exon
so has part: feature:3460264-3460380:1:exon
so has part: feature:3468613-3468694:1:exon
so has part: feature:3484333-3484413:1:exon
so has part: feature:3487259-3487338:1:exon
so has part: feature:3490352-3490458:1:exon
so has part: feature:3493624-3493661:1:exon
so has part: feature:3496342-3496484:1:exon
so has part: feature:3504030-3504100:1:exon
so has part: feature:3505794-3505882:1:exon
so has part: feature:3516462-3516526:1:exon
so has part: feature:3527333-3527435:1:exon
so has part: feature:3533689-3533819:1:exon
so has part: feature:3535125-3535250:1:exon
so has part: feature:3548126-3548215:1:exon
so has part: feature:3550098-3550256:1:exon
so has part: feature:3551915-3552076:1:exon
so has part: feature:3554916-3554992:1:exon
so has part: feature:3556572-3556689:1:exon
so has part: feature:3559786-3559923:1:exon
so has part: feature:3562010-3562135:1:exon

XP_023488847.1
type: Protein
SIO_000068: ncbiprotein

position:3266641:1
position: 3266641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3266641-3266688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3460264-3460380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3468613-3468694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3484333-3484413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3487259-3487338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3490352-3490458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493624-3493661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496342-3496484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3504030-3504100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3505794-3505882:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3516462-3516526:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3527333-3527435:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3533689-3533819:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3535125-3535250:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3548126-3548215:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3550098-3550256:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3551915-3552076:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3554916-3554992:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3556572-3556689:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3559786-3559923:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3562010-3562135:1:exon

RPS6KA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9796
gene: RPS6KA2
product: ribosomal protein S6 kinase A2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_023633078.1
SIO_010081: RPS6KA2
subclass of: SO_0000673
so part of: RPS6KA2
location: join(3321831..3322657,3460264..3460380,3468613..3468694,3484333..3484413,3487259..3487338,3490352..3490458,3493624..3493661,3496342..3496484,3504030..3504100,3505794..3505882,3516462..3516526,3527333..3527435,3533689..3533819,3535125..3535250,3548126..3548215,3550098..3550256,3551915..3552076,3554916..3554992,3556572..3556689,3559786..3559923,3562010..3565406)
location: region:3321831-3565406:1
so has part: feature:3321831-3322657:1:exon
so has part: feature:3460264-3460380:1:exon
so has part: feature:3468613-3468694:1:exon
so has part: feature:3484333-3484413:1:exon
so has part: feature:3487259-3487338:1:exon
so has part: feature:3490352-3490458:1:exon
so has part: feature:3493624-3493661:1:exon
so has part: feature:3496342-3496484:1:exon
so has part: feature:3504030-3504100:1:exon
so has part: feature:3505794-3505882:1:exon
so has part: feature:3516462-3516526:1:exon
so has part: feature:3527333-3527435:1:exon
so has part: feature:3533689-3533819:1:exon
so has part: feature:3535125-3535250:1:exon
so has part: feature:3548126-3548215:1:exon
so has part: feature:3550098-3550256:1:exon
so has part: feature:3551915-3552076:1:exon
so has part: feature:3554916-3554992:1:exon
so has part: feature:3556572-3556689:1:exon
so has part: feature:3559786-3559923:1:exon
so has part: feature:3562010-3565406:1:exon

position:3321831:1
position: 3321831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3321831-3322657:1:exon

position:3322657:1
position: 3322657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3460264-3460380:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3468613-3468694:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3484333-3484413:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3487259-3487338:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3490352-3490458:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3493624-3493661:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3496342-3496484:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3504030-3504100:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3505794-3505882:1:exon