Balaenoptera musculus isolate JJ_BM4_2016_0621 chromosome 18, mBalMus1.pri.v3, whole genome shotgun sequence.
type: Entry
definition: Balaenoptera musculus isolate JJ_BM4_2016_0621 chromosome 18, mBalMus1.pri.v3, whole genome shotgun sequence.
sequence version: NC_045802.1
sequence date: 2020-10-28
sequence: sequence
division: CON
label: NC_045802.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA607322
dblink: SAMN12287136
keyword: WGS
keyword: RefSeq
source: Balaenoptera musculus (Blue whale)
organism: Balaenoptera musculus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM020958.2.\nAssembly name: mBalMus1.pri.v3\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the G10K on 2020/10/02. The\noriginal whole-genome shotgun project has the accession\nVNFC00000000.3.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: G10K\nAssembly Date :: 25-OCT-2019\nAssembly Method :: FALCON v. 1.0.2; FALCON-Unzip v. 1.0.2;\n purge_haplotigs v. bitbucket 7.10.2018;\n scaff10x v. git 4.28.2018; Bionano Solve\n DLS v. 3.2.1; Salsa2 HiC v. 2.0; Arrow\n polishing and gap filling v. 5.1.0.26412;\n longranger align v. 2.2.2; freebayes v.\n 1.2.0; gEVAL manual curation v.\n 2019-10-25; VGP standard assembly\n pipeline v. 1.5; Additional Purge_dup and\n Polish v. 2020-05-28\nAssembly Name :: mBalMus1.pri.v3\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 51.16x\nSequencing Technology :: PacBio Sequel I; Illumina NovaSeq; 10X\n Genomics chromium; Dovetail Genomics HiC\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Balaenoptera musculus Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 79663398
topology: linear
so has quality: SO_0000987
location: 1..79663398
location: region:1-79663398:1
RO_0002162: 9771

NC_045802
type: RefSeq
SIO_000068: refseq

PRJNA607322
type: BioProject
SIO_000068: bioproject

SAMN12287136
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:79663398:1
position: 79663398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-79663398:1:source
so part of: sequence
organism: Balaenoptera musculus
mol type: genomic DNA
isolate: JJ_BM4_2016_0621
chromosome: 18
sex: male
cell type: Fibroblast
tissue type: Epidermis and Blubber
country: Pacific Ocean: Santa Barbara
lat lon: 34.41938 N 119.69905 W
collection date: 2016
collected by: Jeff K. Jacobsen, Susanne Meyer, Li-Fang Chu, Jessica Antosiewicz-Bourget

9771
type: Taxonomy
SIO_000068: taxonomy

ATP12A
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: ATP12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 131039..159904
location: region:131039-159904:1
so has part: feature:131039-159904:1:exon
subclass of: SO_0000010

118883940
type: Gene
SIO_000068: ncbigene

position:131039:1
position: 131039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:159904:1
position: 159904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131039-159904:1:exon

ATP12A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ATP12A
product: ATPase H+/K+ transporting non-gastric alpha2 subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831087.1
SIO_010081: ATP12A
subclass of: SO_0000673
so part of: ATP12A
location: join(131039..131068,131601..131753,134923..134982,135774..135977,136745..136858,137812..137946,138073..138190,138452..138720,139882..140080,140215..140324,141947..142081,145415..145607,147256..147431,148141..148277,151157..151307,154669..154837,154932..155086,156233..156356,156487..156632,157053..157186,157315..157416,157822..157913,157998..159904)
location: region:131039-159904:1
so has part: feature:131039-131068:1:exon
so has part: feature:131601-131753:1:exon
so has part: feature:134923-134982:1:exon
so has part: feature:135774-135977:1:exon
so has part: feature:136745-136858:1:exon
so has part: feature:137812-137946:1:exon
so has part: feature:138073-138190:1:exon
so has part: feature:138452-138720:1:exon
so has part: feature:139882-140080:1:exon
so has part: feature:140215-140324:1:exon
so has part: feature:141947-142081:1:exon
so has part: feature:145415-145607:1:exon
so has part: feature:147256-147431:1:exon
so has part: feature:148141-148277:1:exon
so has part: feature:151157-151307:1:exon
so has part: feature:154669-154837:1:exon
so has part: feature:154932-155086:1:exon
so has part: feature:156233-156356:1:exon
so has part: feature:156487-156632:1:exon
so has part: feature:157053-157186:1:exon
so has part: feature:157315-157416:1:exon
so has part: feature:157822-157913:1:exon
so has part: feature:157998-159904:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:131039-131068:1:exon

position:131068:1
position: 131068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131601-131753:1:exon

position:131601:1
position: 131601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:131753:1
position: 131753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:134923-134982:1:exon

position:134923:1
position: 134923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:134982:1
position: 134982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:135774-135977:1:exon

position:135774:1
position: 135774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:135977:1
position: 135977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:136745-136858:1:exon

position:136745:1
position: 136745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:136858:1
position: 136858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:137812-137946:1:exon

position:137812:1
position: 137812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:137946:1
position: 137946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:138073-138190:1:exon

position:138073:1
position: 138073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138190:1
position: 138190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:138452-138720:1:exon

position:138452:1
position: 138452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:138720:1
position: 138720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:139882-140080:1:exon

position:139882:1
position: 139882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140080:1
position: 140080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:140215-140324:1:exon

position:140215:1
position: 140215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:140324:1
position: 140324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:141947-142081:1:exon

position:141947:1
position: 141947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:142081:1
position: 142081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:145415-145607:1:exon

position:145415:1
position: 145415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:145607:1
position: 145607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:147256-147431:1:exon

position:147256:1
position: 147256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:147431:1
position: 147431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:148141-148277:1:exon

position:148141:1
position: 148141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:148277:1
position: 148277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:151157-151307:1:exon

position:151157:1
position: 151157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:151307:1
position: 151307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:154669-154837:1:exon

position:154669:1
position: 154669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:154837:1
position: 154837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:154932-155086:1:exon

position:154932:1
position: 154932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:155086:1
position: 155086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:156233-156356:1:exon

position:156233:1
position: 156233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156356:1
position: 156356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:156487-156632:1:exon

position:156487:1
position: 156487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:156632:1
position: 156632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:157053-157186:1:exon

position:157053:1
position: 157053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157186:1
position: 157186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:157315-157416:1:exon

position:157315:1
position: 157315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157416:1
position: 157416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:157822-157913:1:exon

position:157822:1
position: 157822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:157913:1
position: 157913
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:157998-159904:1:exon

position:157998:1
position: 157998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ATP12A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ATP12A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: potassium-transporting ATPase alpha chain 2
translation: MRPKTEIYSVELSGTGDIGKTDKGDGEKYGGLKKNCLERKKHQPKEELKKELDLDDHKLSNEELETKYGTNIITGLSSTRAAELLARDGPNTLTPPKETPEIIKFLKQMVGGFSILLWIGAILCWIAYGIQYSNDKSSSLDSVYLGSVLALVVILTGVFAYYQEAKSTNIMASFHQMIPQQALVIRDSEKKTVPADQLVVGDIVEIKGGDRIPADIRLLSAQGCKVDNSSLTGESEPQPRSCEFTHDNPLETKNISFFSTTCLEGTATGMVITTGDRTIMGQIASLASGVQNVKTPIGIEIEHFVHIVAGVAVSIGVLFFIIAVSMKYYVLDSIIFLIGIIVANVPEGLLATVTVALSLTAKRMAKKNCLVKGLEAVETLGSTSIICSDKTGTLTQNRMTVAHLWFDNQVFVADTSEDHSNQAFDQSSATWASLSKIITLCNRAEFRPGQESVPIMKKAVVGDASETALLKFSEVILGNVMEIRKRNRKVAEIPFNSTNKFQLSIHETDDPSDKRFLVVMKGAPERVLEKCSTIMVNGQEQPLDRSTAKAFHTAYMELGGLGERVLGFCHLYLPADEFPATYSFDVDTMNFPTSNFCFVGLLSMIDPPRSTVPDAVTKCRSAGIKIIMVTGDHPITAKAIAKSVGIISANSETVEDIAKRLNVAVEQVNRRDAKAAVVTGMELKDMSPAQLDELLANHSEIVFARTSPQQKLIIVEGCQRQDAIVAVTGDGVNDSPALKKADIGIAMGITGSDAAKSAADMVLLDDNFASIVTGVEEGRLIFDNLKKTIAYTLTKNIAELCPFLIYIIAGLPLPIGTITILFIDLGTDIIPSIALAYEKAESDIMNRKPRHKKKDRLVNKPLAVYSYLHIGLMQALGAFVVYFTVYAQEGFRPSTLLNLRVEWEKGYVNDLEDSYGQEWTSYQRRYLEWTGYTAFFVGIMIQQIADLIIRKTRRNSIFQQGLFRNKVIWVGIASQVIIALILSYGLGSIVALNFTMLRPQYWFVAVPHAVLIWVYDEVRKLAIRLYPGSWWDKNMYY
SIO_010081: ATP12A
subclass of: SO_0000673
so part of: ATP12A
location: join(131060..131068,131601..131753,134923..134982,135774..135977,136745..136858,137812..137946,138073..138190,138452..138720,139882..140080,140215..140324,141947..142081,145415..145607,147256..147431,148141..148277,151157..151307,154669..154837,154932..155086,156233..156356,156487..156632,157053..157186,157315..157416,157822..157913,157998..158026)
location: region:131060-158026:1
so has part: feature:131060-131068:1:exon
so has part: feature:131601-131753:1:exon
so has part: feature:134923-134982:1:exon
so has part: feature:135774-135977:1:exon
so has part: feature:136745-136858:1:exon
so has part: feature:137812-137946:1:exon
so has part: feature:138073-138190:1:exon
so has part: feature:138452-138720:1:exon
so has part: feature:139882-140080:1:exon
so has part: feature:140215-140324:1:exon
so has part: feature:141947-142081:1:exon
so has part: feature:145415-145607:1:exon
so has part: feature:147256-147431:1:exon
so has part: feature:148141-148277:1:exon
so has part: feature:151157-151307:1:exon
so has part: feature:154669-154837:1:exon
so has part: feature:154932-155086:1:exon
so has part: feature:156233-156356:1:exon
so has part: feature:156487-156632:1:exon
so has part: feature:157053-157186:1:exon
so has part: feature:157315-157416:1:exon
so has part: feature:157822-157913:1:exon
so has part: feature:157998-158026:1:exon

XP_036686982.1
type: Protein
SIO_000068: ncbiprotein

position:131060:1
position: 131060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:158026:1
position: 158026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131060-131068:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131601-131753:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:134923-134982:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:135774-135977:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:136745-136858:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:137812-137946:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:138073-138190:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:138452-138720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:139882-140080:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:140215-140324:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:141947-142081:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:145415-145607:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:147256-147431:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:148141-148277:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:151157-151307:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:154669-154837:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:154932-155086:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:156233-156356:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:156487-156632:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:157053-157186:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:157315-157416:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:157822-157913:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:157998-158026:1:exon

RNF17
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: RNF17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 174074..295307
location: region:174074-295307:1
so has part: feature:174074-295307:1:exon
subclass of: SO_0000010

118884383
type: Gene
SIO_000068: ncbigene

position:174074:1
position: 174074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295307:1
position: 295307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174074-295307:1:exon

RNF17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: RNF17
product: ring finger protein 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036832032.1
SIO_010081: RNF17
subclass of: SO_0000673
so part of: RNF17
location: join(174074..174206,177149..177243,181892..181983,183838..183949,185095..185175,186545..186645,197596..197767,198984..199060,199334..199408,203380..203690,206141..206299,210337..210526,211785..211953,213283..213473,214419..214560,228190..228343,231702..231817,233082..233202,235827..235947,244013..244240,244903..245053,245194..245312,258358..258448,259683..259798,261441..261730,263361..263524,281263..281382,282363..282443,284745..284870,286019..286075,287881..287997,289151..289319,290977..291112,292966..293155,294591..294690,295178..295307)
location: region:174074-295307:1
so has part: feature:174074-174206:1:exon
so has part: feature:177149-177243:1:exon
so has part: feature:181892-181983:1:exon
so has part: feature:183838-183949:1:exon
so has part: feature:185095-185175:1:exon
so has part: feature:186545-186645:1:exon
so has part: feature:197596-197767:1:exon
so has part: feature:198984-199060:1:exon
so has part: feature:199334-199408:1:exon
so has part: feature:203380-203690:1:exon
so has part: feature:206141-206299:1:exon
so has part: feature:210337-210526:1:exon
so has part: feature:211785-211953:1:exon
so has part: feature:213283-213473:1:exon
so has part: feature:214419-214560:1:exon
so has part: feature:228190-228343:1:exon
so has part: feature:231702-231817:1:exon
so has part: feature:233082-233202:1:exon
so has part: feature:235827-235947:1:exon
so has part: feature:244013-244240:1:exon
so has part: feature:244903-245053:1:exon
so has part: feature:245194-245312:1:exon
so has part: feature:258358-258448:1:exon
so has part: feature:259683-259798:1:exon
so has part: feature:261441-261730:1:exon
so has part: feature:263361-263524:1:exon
so has part: feature:281263-281382:1:exon
so has part: feature:282363-282443:1:exon
so has part: feature:284745-284870:1:exon
so has part: feature:286019-286075:1:exon
so has part: feature:287881-287997:1:exon
so has part: feature:289151-289319:1:exon
so has part: feature:290977-291112:1:exon
so has part: feature:292966-293155:1:exon
so has part: feature:294591-294690:1:exon
so has part: feature:295178-295307:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:174074-174206:1:exon

position:174206:1
position: 174206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:177149-177243:1:exon

position:177149:1
position: 177149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:177243:1
position: 177243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:181892-181983:1:exon

position:181892:1
position: 181892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:181983:1
position: 181983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:183838-183949:1:exon

position:183838:1
position: 183838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:183949:1
position: 183949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:185095-185175:1:exon

position:185095:1
position: 185095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185175:1
position: 185175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:186545-186645:1:exon

position:186545:1
position: 186545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:186645:1
position: 186645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:197596-197767:1:exon

position:197596:1
position: 197596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:197767:1
position: 197767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:198984-199060:1:exon

position:198984:1
position: 198984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199060:1
position: 199060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:199334-199408:1:exon

position:199334:1
position: 199334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199408:1
position: 199408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:203380-203690:1:exon

position:203380:1
position: 203380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:203690:1
position: 203690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:206141-206299:1:exon

position:206141:1
position: 206141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:206299:1
position: 206299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:210337-210526:1:exon

position:210337:1
position: 210337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:210526:1
position: 210526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:211785-211953:1:exon

position:211785:1
position: 211785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211953:1
position: 211953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:213283-213473:1:exon

position:213283:1
position: 213283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:213473:1
position: 213473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:214419-214560:1:exon

position:214419:1
position: 214419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:214560:1
position: 214560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:228190-228343:1:exon

position:228190:1
position: 228190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:228343:1
position: 228343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:231702-231817:1:exon

position:231702:1
position: 231702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:231817:1
position: 231817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:233082-233202:1:exon

position:233082:1
position: 233082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:233202:1
position: 233202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:235827-235947:1:exon

position:235827:1
position: 235827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:235947:1
position: 235947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:244013-244240:1:exon

position:244013:1
position: 244013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:244240:1
position: 244240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:244903-245053:1:exon

position:244903:1
position: 244903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245053:1
position: 245053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:245194-245312:1:exon

position:245194:1
position: 245194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245312:1
position: 245312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:258358-258448:1:exon

position:258358:1
position: 258358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:258448:1
position: 258448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:259683-259798:1:exon

position:259683:1
position: 259683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:259798:1
position: 259798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:261441-261730:1:exon

position:261441:1
position: 261441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:261730:1
position: 261730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:263361-263524:1:exon

position:263361:1
position: 263361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:263524:1
position: 263524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:281263-281382:1:exon

position:281263:1
position: 281263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281382:1
position: 281382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:282363-282443:1:exon

position:282363:1
position: 282363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:282443:1
position: 282443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:284745-284870:1:exon

position:284745:1
position: 284745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284870:1
position: 284870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:286019-286075:1:exon

position:286019:1
position: 286019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:286075:1
position: 286075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:287881-287997:1:exon

position:287881:1
position: 287881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:287997:1
position: 287997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:289151-289319:1:exon

position:289151:1
position: 289151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:289319:1
position: 289319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:290977-291112:1:exon

position:290977:1
position: 290977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291112:1
position: 291112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:292966-293155:1:exon

position:292966:1
position: 292966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293155:1
position: 293155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:294591-294690:1:exon

position:294591:1
position: 294591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:294690:1
position: 294690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:295178-295307:1:exon

position:295178:1
position: 295178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNF17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: RNF17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RING finger protein 17
translation: MMEATASRASCVASSGGQVESKGQAWGAAEALCSRCGRRSSGAPGHHHELQCGHAFCELCLLLTEEYSTITCPDCEVASTINTKQEYCPIGGCIKEDSFMEKLQPKKMKTCSQDFKKTADLLTVGLKHSTSTHRTVLNPSTVIEETETGEEIDEALKVAAQNFEQLSIAVKMLEHIYNQTKEETVSLIEVLEKQFDQLFTSLDSRKKNLCEEVVRNTDDYLSNIITAKRYIEVKKNDLDAAMKIARELKSTPSLRIYCDLNQIIWTLKLTFESELSQVSSLKLRNSPKLNMNCSEIICMFNSMGKIEFEDSTKFDPQESEMGQNVQKKYNHKKEFSCSGTYPSLEKKKVDISILTSEAPPPTPLQRENSDTHLEAKHFPPQNEVVAITPCETVAALPQAGPSPDVIIEEVIEEDLESSPELVFVSHVIHPCHFYIRKYSQIKDATVLEKKVNQFCSKSVYLDPSDILELGARIFVNSIENGMWCRGTITELIPIGSESIRKPYIPTKFSVHKVALIQIFMVDFGNSEVLIVAGVGDTHMRSEHIAKQHVTLNDLCLALRKSEPYIEGLLKDIQPLAQPCSLKDIVPQNSTEGWGEEAKIEFLKMVNKKAVLMKVFKEEDGVLIVDLQKPPTNKISSDMPVSLRDALVFMELARFRSQSPRSHSEKNTTLHYHPPVLPKGMTDVSVMVCHINSPTDFYLQLIESLDFLFLLKTIEEFYKNEDGENLEILCPVQGQACVAKFEDGVWYRAKVIGLPGHREVEVKYVDFGNTAKITLKEMRKIKDEFLNPAEKAIKCKLAYVEPCKGTLQWSKKAKEKFQEKTQDKFMTCSVIKILEDNVLLVELFDFLGAPGMTPTSINDQLVKEGLASYEVGYTLKDNSKKHTEVWDPSPEEIISNEVNNLNPVFAKSLSNEDLQSLYYKELPVYICSVVSPEKIYVQWLLTENLLHSLGEKMVAAYENSKWEPVKWKNDMHCAVKIPNENQWQRGQIIRMVTDTLVEVLLYDVGVELVVNINCLRELEENLKTMRRLSLECSLVDIRPAGGSDKWTATACDCLSLYLTGAVATIIIQENNTTWPLPVKIFCRDDKGECVDVSKYLIKKGLALRETRPNKLGNSHSLSQKSLEIPLVQGESVVTKCIKMNADPDKKAADILSEHKVSEFKEKILEPRTTGCYKPPAIPNEKVFEAVVSCIGDDGTIFVVPKLSEFELIKMMNEIQSNLKCLGLLEPYFWRKGEACAVRGSDTLWYRGKVMEVIGGTIRVQYLDHGFTEKIPQCHLYPILLYPDTPQLCIPCHLYNTIPVGNVWQPDAVEVLQELLSEREVEVHIMELPENPWEKLSIHLYFDGMSLSYFMAHHKYCTFEHSEEILKEKPTDYNKKYEEERWEIRFEELLLPETETPILPPYLSSPLPPPGELYAVQVKHVVSPSEVYICLDSVENCNLVKQHDDTVDGGVSWEPEAESLEEALGRFNKDVETFLPLTDFRTEMPCLAEYDDGVWYRAKIVSIKEFNPLAVLVQFVDYGSTEKLTINRLCQIPVHLMQYPARAIKVLLAGFKPPLRDVGKARIPYCPKWSMEALWAMIDCLQGKQLYASSMAQVPEQIVTLYEDEGYPVHMSLVEMGLADQDE
SIO_010081: RNF17
subclass of: SO_0000673
so part of: RNF17
location: join(174074..174206,177149..177243,181892..181983,183838..183949,185095..185175,186545..186645,197596..197767,198984..199060,199334..199408,203380..203690,206141..206299,210337..210526,211785..211953,213283..213473,214419..214560,228190..228343,231702..231817,233082..233202,235827..235947,244013..244240,244903..245053,245194..245312,258358..258448,259683..259798,261441..261730,263361..263524,281263..281382,282363..282443,284745..284870,286019..286075,287881..287997,289151..289319,290977..291112,292966..293155,294591..294689)
location: region:174074-294689:1
so has part: feature:174074-174206:1:exon
so has part: feature:177149-177243:1:exon
so has part: feature:181892-181983:1:exon
so has part: feature:183838-183949:1:exon
so has part: feature:185095-185175:1:exon
so has part: feature:186545-186645:1:exon
so has part: feature:197596-197767:1:exon
so has part: feature:198984-199060:1:exon
so has part: feature:199334-199408:1:exon
so has part: feature:203380-203690:1:exon
so has part: feature:206141-206299:1:exon
so has part: feature:210337-210526:1:exon
so has part: feature:211785-211953:1:exon
so has part: feature:213283-213473:1:exon
so has part: feature:214419-214560:1:exon
so has part: feature:228190-228343:1:exon
so has part: feature:231702-231817:1:exon
so has part: feature:233082-233202:1:exon
so has part: feature:235827-235947:1:exon
so has part: feature:244013-244240:1:exon
so has part: feature:244903-245053:1:exon
so has part: feature:245194-245312:1:exon
so has part: feature:258358-258448:1:exon
so has part: feature:259683-259798:1:exon
so has part: feature:261441-261730:1:exon
so has part: feature:263361-263524:1:exon
so has part: feature:281263-281382:1:exon
so has part: feature:282363-282443:1:exon
so has part: feature:284745-284870:1:exon
so has part: feature:286019-286075:1:exon
so has part: feature:287881-287997:1:exon
so has part: feature:289151-289319:1:exon
so has part: feature:290977-291112:1:exon
so has part: feature:292966-293155:1:exon
so has part: feature:294591-294689:1:exon

XP_036687927.1
type: Protein
SIO_000068: ncbiprotein

position:294689:1
position: 294689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174074-174206:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:177149-177243:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:181892-181983:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:183838-183949:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:185095-185175:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:186545-186645:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:197596-197767:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:198984-199060:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:199334-199408:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:203380-203690:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:206141-206299:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:210337-210526:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:211785-211953:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:213283-213473:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:214419-214560:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:228190-228343:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:231702-231817:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233082-233202:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:235827-235947:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:244013-244240:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:244903-245053:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:245194-245312:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:258358-258448:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:259683-259798:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:261441-261730:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:263361-263524:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:281263-281382:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:282363-282443:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:284745-284870:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:286019-286075:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:287881-287997:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:289151-289319:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:290977-291112:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:292966-293155:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:294591-294689:1:exon

CENPJ
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(296413..359367)
location: region:296413-359367:-1
so has part: feature:296413-359367:-1:exon
subclass of: SO_0000010

118884300
type: Gene
SIO_000068: ncbigene

position:296413:-1
position: 296413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:359367:-1
position: 359367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296413-359367:-1:exon

CENPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: CENPJ
product: centromere protein J, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831852.1
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(296413..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350787,351257..351471,359085..359367))
location: region:296413-359367:-1
so has part: feature:359085-359367:-1:exon
so has part: feature:351257-351471:-1:exon
so has part: feature:350278-350787:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:296413-297508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:359085-359367:-1:exon

position:359085:-1
position: 359085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351257-351471:-1:exon

position:351257:-1
position: 351257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:351471:-1
position: 351471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:350278-350787:-1:exon

position:350278:-1
position: 350278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350787:-1
position: 350787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:349458-349581:-1:exon

position:349458:-1
position: 349458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349581:-1
position: 349581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:343225-343524:-1:exon

position:343225:-1
position: 343225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343524:-1
position: 343524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:333340-333451:-1:exon

position:333340:-1
position: 333340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:333451:-1
position: 333451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:332453-332555:-1:exon

position:332453:-1
position: 332453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332555:-1
position: 332555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:330693-332322:-1:exon

position:330693:-1
position: 330693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:332322:-1
position: 332322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:328817-328949:-1:exon

position:328817:-1
position: 328817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:328949:-1
position: 328949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:325513-325678:-1:exon

position:325513:-1
position: 325513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:325678:-1
position: 325678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:311040-311282:-1:exon

position:311040:-1
position: 311040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311282:-1
position: 311282
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307876:-1:exon

position:307792:-1
position: 307792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307876:-1
position: 307876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:301541-301602:-1:exon

position:301541:-1
position: 301541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301602:-1
position: 301602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:301159-301278:-1:exon

position:301159:-1
position: 301159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301278:-1
position: 301278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:299381-299521:-1:exon

position:299381:-1
position: 299381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299521:-1
position: 299521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:299217-299301:-1:exon

position:299217:-1
position: 299217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299301:-1
position: 299301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:299012-299132:-1:exon

position:299012:-1
position: 299012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299132:-1
position: 299132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:296413-297508:-1:exon

position:297508:-1
position: 297508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CENPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: CENPJ
product: centromere protein J, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036831853.1
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(296413..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350787,358925..359066))
location: region:296413-359066:-1
so has part: feature:358925-359066:-1:exon
so has part: feature:350278-350787:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:296413-297508:-1:exon

position:359066:-1
position: 359066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358925-359066:-1:exon

position:358925:-1
position: 358925
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350787:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349458-349581:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:343225-343524:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:333340-333451:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:332453-332555:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:330693-332322:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:328817-328949:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:325513-325678:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:311040-311282:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:307792-307876:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301541-301602:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301159-301278:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299381-299521:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299217-299301:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:299012-299132:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:296413-297508:-1:exon

CENPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: CENPJ
product: centromere protein J, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831850.1
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(296413..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350787,351257..351471,358925..359066))
location: region:296413-359066:-1
so has part: feature:358925-359066:-1:exon
so has part: feature:351257-351471:-1:exon
so has part: feature:350278-350787:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:296413-297508:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:358925-359066:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:351257-351471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350278-350787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349458-349581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343225-343524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333340-333451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332453-332555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330693-332322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328817-328949:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:325513-325678:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311040-311282:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307876:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301541-301602:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301159-301278:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299381-299521:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:299217-299301:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299012-299132:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:296413-297508:-1:exon

CENPJ
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: CENPJ
product: centromere protein J, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831851.1
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(296413..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350787,351257..351471,358515..358899))
location: region:296413-358899:-1
so has part: feature:358515-358899:-1:exon
so has part: feature:351257-351471:-1:exon
so has part: feature:350278-350787:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:296413-297508:-1:exon

position:358899:-1
position: 358899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:358515-358899:-1:exon

position:358515:-1
position: 358515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:351257-351471:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:350278-350787:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:349458-349581:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:343225-343524:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:333340-333451:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:332453-332555:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330693-332322:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:328817-328949:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:325513-325678:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:311040-311282:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:307792-307876:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:301541-301602:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:301159-301278:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299381-299521:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:299217-299301:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:299012-299132:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:296413-297508:-1:exon

CENPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J
translation: MFLMSTSSELNSGQNFLTQWMTSPSRAGVILNRGFPILEAEEEKRANVNISTSSRIKPTDFSNSFSFISEEDSLHEEQKLEPNSPYKLQTDKSETQRVFPSTKEGTQIVACEHAPGHWEDNKNDFISDPGSEFKEVAYKDPLFKKLEQLKEVQQKKQEQLKRQQLEQLQRLMEEQEKLLAMVSGQHTLPGLTLVPDDQSQKYRSPGNSATVEKPTPFLPSYIYQNQTQEKKHTSNILSDEQNNFRRTTHQDVVLTSKSGASPNLFYEAQYQEALVKKNDLKEENHNHPKGEGILPCSEKMTEEIQEGNDTNLKKIGDSSEVVNIEERPIKAAIRERKQTFEDYLEEQIRLEEQELKQKQLREAEGSLLIKAKPKQPFLKRGEGLARFTNAKSKFQKGRESKLVTTQSISEDKPVFKLDKQQFQRKTALISKELCTENLPVKKNSKTRTKSGCVTLSQKPKVLKGNNRKSLSPAGLKILAGKKCDGQFRGQINLEKKVESNNKENVPECTKPCDVGCKIWNKTQGKDRLPLSTGLASCVASKSPVSETLKESESSLDISLQKKLENWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQQICRGHRLSSTPVKAVQQEKTTPPGPISECKQNEGPDRTKCESQAECELAPQRPDSVSSPDVPQEQSCKVSRKVFQMSTCESPTRWSASDDGGGTDSDDSTDSEEQLDVTIKPSTEDKERGFSSREDSPQVCDGRGPLRDTRTQEEDKRRDVDLDLSDKDYSSDESILITSLKNKASDSSRGHPSMSKIDFDDERTWTDLEDDSFKHDVILGNEAIYGTPQTTYPNKSEICVLDKTIKRKVAPVKKGEGLNKSSRSTSPPPTSDLMMKFFPSLKPKSKSDSRLGNEPKLNINQDQPPSDNTRSQVLREKVTELETEIEKFKAENTSLAKLRIERESALEKLRKEIADFEQQKAKELARVEEFKKEEMRKLQKERKVFEKYSTVARTFPDKKEREEIQALKQQIADLQEDLKRKEAKWSSTHGRLRSQIEMLVKENTDLREEIKVMERFRLDAWKKAEATESSTRMGQCVTASRRDGSTKSSVRFQKSQVSSGTQVEKYKKNYLPTQGSPSRRSKSGSRDLGNSDKGQIASPREPPEPVNSPDPECKEEDEKEEKEEIQGEISHPDGKIEKVYKNGCHVILFPNGTRKEASADGKTVTVTFFNGDVKQVTPDGRVIYYYAATHTTHTTYPEGLEVLHFSSGQIEKHFPDGRKEITFPDQTIKNLFADGQEESIFPDGTIVRGQRDGNKIIEFNNGQRELHTAQFKRREYPDGTVKTVYTNGLQETKYSSGRVRVKDKDGNVLMDTKLS
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(297313..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350721))
location: region:297313-350721:-1
so has part: feature:350278-350721:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:297313-297508:-1:exon

XP_036687745.1
type: Protein
SIO_000068: ncbiprotein

position:297313:-1
position: 297313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350721:-1
position: 350721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350278-350721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349458-349581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343225-343524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333340-333451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332453-332555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330693-332322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328817-328949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325513-325678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311040-311282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307792-307876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:301541-301602:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301159-301278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299381-299521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299217-299301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299012-299132:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:297313-297508:-1:exon

CENPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J
translation: MFLMSTSSELNSGQNFLTQWMTSPSRAGVILNRGFPILEAEEEKRANVNISTSSRIKPTDFSNSFSFISEEDSLHEEQKLEPNSPYKLQTDKSETQRVFPSTKEGTQIVACEHAPGHWEDNKNDFISDPGSEFKEVAYKDPLFKKLEQLKEVQQKKQEQLKRQQLEQLQRLMEEQEKLLAMVSGQHTLPGLTLVPDDQSQKYRSPGNSATVEKPTPFLPSYIYQNQTQEKKHTSNILSDEQNNFRRTTHQDVVLTSKSGASPNLFYEAQYQEALVKKNDLKEENHNHPKGEGILPCSEKMTEEIQEGNDTNLKKIGDSSEVVNIEERPIKAAIRERKQTFEDYLEEQIRLEEQELKQKQLREAEGSLLIKAKPKQPFLKRGEGLARFTNAKSKFQKGRESKLVTTQSISEDKPVFKLDKQQFQRKTALISKELCTENLPVKKNSKTRTKSGCVTLSQKPKVLKGNNRKSLSPAGLKILAGKKCDGQFRGQINLEKKVESNNKENVPECTKPCDVGCKIWNKTQGKDRLPLSTGLASCVASKSPVSETLKESESSLDISLQKKLENWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQQICRGHRLSSTPVKAVQQEKTTPPGPISECKQNEGPDRTKCESQAECELAPQRPDSVSSPDVPQEQSCKVSRKVFQMSTCESPTRWSASDDGGGTDSDDSTDSEEQLDVTIKPSTEDKERGFSSREDSPQVCDGRGPLRDTRTQEEDKRRDVDLDLSDKDYSSDESILITSLKNKASDSSRGHPSMSKIDFDDERTWTDLEDDSFKHDVILGNEAIYGTPQTTYPNKSEICVLDKTIKRKVAPVKKGEGLNKSSRSTSPPPTSDLMMKFFPSLKPKSKSDSRLGNEPKLNINQDQPPSDNTRSQVLREKVTELETEIEKFKAENTSLAKLRIERESALEKLRKEIADFEQQKAKELARVEEFKKEEMRKLQKERKVFEKYSTVARTFPDKKEREEIQALKQQIADLQEDLKRKEAKWSSTHGRLRSQIEMLVKENTDLREEIKVMERFRLDAWKKAEATESSTRMGQCVTASRRDGSTKSSVRFQKSQVSSGTQVEKYKKNYLPTQGSPSRRSKSGSRDLGNSDKGQIASPREPPEPVNSPDPECKEEDEKEEKEEIQGEISHPDGKIEKVYKNGCHVILFPNGTRKEASADGKTVTVTFFNGDVKQVTPDGRVIYYYAATHTTHTTYPEGLEVLHFSSGQIEKHFPDGRKEITFPDQTIKNLFADGQEESIFPDGTIVRGQRDGNKIIEFNNGQRELHTAQFKRREYPDGTVKTVYTNGLQETKYSSGRVRVKDKDGNVLMDTKLS
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(297313..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350721))
location: region:297313-350721:-1
so has part: feature:350278-350721:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:297313-297508:-1:exon

XP_036687746.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350278-350721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349458-349581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343225-343524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333340-333451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332453-332555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330693-332322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328817-328949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325513-325678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311040-311282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307792-307876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:301541-301602:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301159-301278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299381-299521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299217-299301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299012-299132:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:297313-297508:-1:exon

CENPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J
translation: MFLMSTSSELNSGQNFLTQWMTSPSRAGVILNRGFPILEAEEEKRANVNISTSSRIKPTDFSNSFSFISEEDSLHEEQKLEPNSPYKLQTDKSETQRVFPSTKEGTQIVACEHAPGHWEDNKNDFISDPGSEFKEVAYKDPLFKKLEQLKEVQQKKQEQLKRQQLEQLQRLMEEQEKLLAMVSGQHTLPGLTLVPDDQSQKYRSPGNSATVEKPTPFLPSYIYQNQTQEKKHTSNILSDEQNNFRRTTHQDVVLTSKSGASPNLFYEAQYQEALVKKNDLKEENHNHPKGEGILPCSEKMTEEIQEGNDTNLKKIGDSSEVVNIEERPIKAAIRERKQTFEDYLEEQIRLEEQELKQKQLREAEGSLLIKAKPKQPFLKRGEGLARFTNAKSKFQKGRESKLVTTQSISEDKPVFKLDKQQFQRKTALISKELCTENLPVKKNSKTRTKSGCVTLSQKPKVLKGNNRKSLSPAGLKILAGKKCDGQFRGQINLEKKVESNNKENVPECTKPCDVGCKIWNKTQGKDRLPLSTGLASCVASKSPVSETLKESESSLDISLQKKLENWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQQICRGHRLSSTPVKAVQQEKTTPPGPISECKQNEGPDRTKCESQAECELAPQRPDSVSSPDVPQEQSCKVSRKVFQMSTCESPTRWSASDDGGGTDSDDSTDSEEQLDVTIKPSTEDKERGFSSREDSPQVCDGRGPLRDTRTQEEDKRRDVDLDLSDKDYSSDESILITSLKNKASDSSRGHPSMSKIDFDDERTWTDLEDDSFKHDVILGNEAIYGTPQTTYPNKSEICVLDKTIKRKVAPVKKGEGLNKSSRSTSPPPTSDLMMKFFPSLKPKSKSDSRLGNEPKLNINQDQPPSDNTRSQVLREKVTELETEIEKFKAENTSLAKLRIERESALEKLRKEIADFEQQKAKELARVEEFKKEEMRKLQKERKVFEKYSTVARTFPDKKEREEIQALKQQIADLQEDLKRKEAKWSSTHGRLRSQIEMLVKENTDLREEIKVMERFRLDAWKKAEATESSTRMGQCVTASRRDGSTKSSVRFQKSQVSSGTQVEKYKKNYLPTQGSPSRRSKSGSRDLGNSDKGQIASPREPPEPVNSPDPECKEEDEKEEKEEIQGEISHPDGKIEKVYKNGCHVILFPNGTRKEASADGKTVTVTFFNGDVKQVTPDGRVIYYYAATHTTHTTYPEGLEVLHFSSGQIEKHFPDGRKEITFPDQTIKNLFADGQEESIFPDGTIVRGQRDGNKIIEFNNGQRELHTAQFKRREYPDGTVKTVYTNGLQETKYSSGRVRVKDKDGNVLMDTKLS
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(297313..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350721))
location: region:297313-350721:-1
so has part: feature:350278-350721:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:297313-297508:-1:exon

XP_036687747.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350278-350721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349458-349581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343225-343524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333340-333451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332453-332555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330693-332322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328817-328949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325513-325678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311040-311282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307792-307876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:301541-301602:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301159-301278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299381-299521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299217-299301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299012-299132:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:297313-297508:-1:exon

CENPJ
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: CENPJ
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centromere protein J
translation: MFLMSTSSELNSGQNFLTQWMTSPSRAGVILNRGFPILEAEEEKRANVNISTSSRIKPTDFSNSFSFISEEDSLHEEQKLEPNSPYKLQTDKSETQRVFPSTKEGTQIVACEHAPGHWEDNKNDFISDPGSEFKEVAYKDPLFKKLEQLKEVQQKKQEQLKRQQLEQLQRLMEEQEKLLAMVSGQHTLPGLTLVPDDQSQKYRSPGNSATVEKPTPFLPSYIYQNQTQEKKHTSNILSDEQNNFRRTTHQDVVLTSKSGASPNLFYEAQYQEALVKKNDLKEENHNHPKGEGILPCSEKMTEEIQEGNDTNLKKIGDSSEVVNIEERPIKAAIRERKQTFEDYLEEQIRLEEQELKQKQLREAEGSLLIKAKPKQPFLKRGEGLARFTNAKSKFQKGRESKLVTTQSISEDKPVFKLDKQQFQRKTALISKELCTENLPVKKNSKTRTKSGCVTLSQKPKVLKGNNRKSLSPAGLKILAGKKCDGQFRGQINLEKKVESNNKENVPECTKPCDVGCKIWNKTQGKDRLPLSTGLASCVASKSPVSETLKESESSLDISLQKKLENWEREKEKENLELDEFLFLEQAADEISFSSNSSFVLKILERDQQICRGHRLSSTPVKAVQQEKTTPPGPISECKQNEGPDRTKCESQAECELAPQRPDSVSSPDVPQEQSCKVSRKVFQMSTCESPTRWSASDDGGGTDSDDSTDSEEQLDVTIKPSTEDKERGFSSREDSPQVCDGRGPLRDTRTQEEDKRRDVDLDLSDKDYSSDESILITSLKNKASDSSRGHPSMSKIDFDDERTWTDLEDDSFKHDVILGNEAIYGTPQTTYPNKSEICVLDKTIKRKVAPVKKGEGLNKSSRSTSPPPTSDLMMKFFPSLKPKSKSDSRLGNEPKLNINQDQPPSDNTRSQVLREKVTELETEIEKFKAENTSLAKLRIERESALEKLRKEIADFEQQKAKELARVEEFKKEEMRKLQKERKVFEKYSTVARTFPDKKEREEIQALKQQIADLQEDLKRKEAKWSSTHGRLRSQIEMLVKENTDLREEIKVMERFRLDAWKKAEATESSTRMGQCVTASRRDGSTKSSVRFQKSQVSSGTQVEKYKKNYLPTQGSPSRRSKSGSRDLGNSDKGQIASPREPPEPVNSPDPECKEEDEKEEKEEIQGEISHPDGKIEKVYKNGCHVILFPNGTRKEASADGKTVTVTFFNGDVKQVTPDGRVIYYYAATHTTHTTYPEGLEVLHFSSGQIEKHFPDGRKEITFPDQTIKNLFADGQEESIFPDGTIVRGQRDGNKIIEFNNGQRELHTAQFKRREYPDGTVKTVYTNGLQETKYSSGRVRVKDKDGNVLMDTKLS
SIO_010081: CENPJ
subclass of: SO_0000673
so part of: CENPJ
location: complement(join(297313..297508,299012..299132,299217..299301,299381..299521,301159..301278,301541..301602,307792..307876,311040..311282,325513..325678,328817..328949,330693..332322,332453..332555,333340..333451,343225..343524,349458..349581,350278..350721))
location: region:297313-350721:-1
so has part: feature:350278-350721:-1:exon
so has part: feature:349458-349581:-1:exon
so has part: feature:343225-343524:-1:exon
so has part: feature:333340-333451:-1:exon
so has part: feature:332453-332555:-1:exon
so has part: feature:330693-332322:-1:exon
so has part: feature:328817-328949:-1:exon
so has part: feature:325513-325678:-1:exon
so has part: feature:311040-311282:-1:exon
so has part: feature:307792-307876:-1:exon
so has part: feature:301541-301602:-1:exon
so has part: feature:301159-301278:-1:exon
so has part: feature:299381-299521:-1:exon
so has part: feature:299217-299301:-1:exon
so has part: feature:299012-299132:-1:exon
so has part: feature:297313-297508:-1:exon

XP_036687748.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350278-350721:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:349458-349581:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:343225-343524:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:333340-333451:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:332453-332555:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:330693-332322:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328817-328949:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:325513-325678:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:311040-311282:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307792-307876:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:301541-301602:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:301159-301278:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:299381-299521:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:299217-299301:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:299012-299132:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:297313-297508:-1:exon

PARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: PARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 364905..391055
location: region:364905-391055:1
so has part: feature:364905-391055:1:exon
subclass of: SO_0000010

118884384
type: Gene
SIO_000068: ncbigene

position:364905:1
position: 364905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391055:1
position: 391055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364905-391055:1:exon

PARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: PARP4
product: poly(ADP-ribose) polymerase family member 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036832034.1
SIO_010081: PARP4
subclass of: SO_0000673
so part of: PARP4
location: join(364905..364916,365441..365633,365929..365937,372298..372364,373708..373783,374561..374683,377452..377601,378096..378233,379067..379156,382564..382725,390988..391055)
location: region:364905-391055:1
so has part: feature:364905-364916:1:exon
so has part: feature:365441-365633:1:exon
so has part: feature:365929-365937:1:exon
so has part: feature:372298-372364:1:exon
so has part: feature:373708-373783:1:exon
so has part: feature:374561-374683:1:exon
so has part: feature:377452-377601:1:exon
so has part: feature:378096-378233:1:exon
so has part: feature:379067-379156:1:exon
so has part: feature:382564-382725:1:exon
so has part: feature:390988-391055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:364905-364916:1:exon

position:364916:1
position: 364916
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:365441-365633:1:exon

position:365441:1
position: 365441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365633:1
position: 365633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:365929-365937:1:exon

position:365929:1
position: 365929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:365937:1
position: 365937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:372298-372364:1:exon

position:372298:1
position: 372298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:372364:1
position: 372364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:373708-373783:1:exon

position:373708:1
position: 373708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:373783:1
position: 373783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:374561-374683:1:exon

position:374561:1
position: 374561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:374683:1
position: 374683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:377452-377601:1:exon

position:377452:1
position: 377452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:377601:1
position: 377601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:378096-378233:1:exon

position:378096:1
position: 378096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:378233:1
position: 378233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:379067-379156:1:exon

position:379067:1
position: 379067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:379156:1
position: 379156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:382564-382725:1:exon

position:382564:1
position: 382564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:382725:1
position: 382725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:390988-391055:1:exon

position:390988:1
position: 390988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: PARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein mono-ADP-ribosyltransferase PARP4
translation: MVSQCTHVILDNADVLSQYQLKSIQKNHIYIANPDFIWESIKERRLVDIKNYDPCKSLDVTPTPDQKAGSSEVKTDDPSLDNSTEKENTVELTKFYTENVGIPHFPQDFEVAKYNTLEKVGTEGGKETAMVELRCPQSPEDPGDHSFLISAHFLLADGIETRRQFSVKKTSTDANEYYENYIEELKKQGFPLREHLAPEATQLACEKLQALLSEEAVNSSVLSPEVSGLVEMLWVEALGRPGHTVLRPVHRTSLNDVSKAEGILLLVKEALRNGETGTSADDDG
SIO_010081: PARP4
subclass of: SO_0000673
so part of: PARP4
location: join(364905..364916,365441..365633,365929..365937,372298..372364,373708..373783,374561..374683,377452..377601,378096..378233,379067..379153)
location: region:364905-379153:1
so has part: feature:364905-364916:1:exon
so has part: feature:365441-365633:1:exon
so has part: feature:365929-365937:1:exon
so has part: feature:372298-372364:1:exon
so has part: feature:373708-373783:1:exon
so has part: feature:374561-374683:1:exon
so has part: feature:377452-377601:1:exon
so has part: feature:378096-378233:1:exon
so has part: feature:379067-379153:1:exon

XP_036687929.1
type: Protein
SIO_000068: ncbiprotein

position:379153:1
position: 379153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:364905-364916:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:365441-365633:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:365929-365937:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:372298-372364:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:373708-373783:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:374561-374683:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:377452-377601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:378096-378233:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:379067-379153:1:exon

MPHOSPH8
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 397996..451919
location: region:397996-451919:1
so has part: feature:397996-451919:1:exon
subclass of: SO_0000010

118884036
type: Gene
SIO_000068: ncbigene

position:397996:1
position: 397996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451919:1
position: 451919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397996-451919:1:exon

MPHOSPH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MPHOSPH8
product: M-phase phosphoprotein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036831372.1
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(397996..398401,410757..410912,423508..424362,426377..426476,429523..429780,435170..435295,435376..435464,440938..441078,441725..441811,444515..444669,446467..446621,448809..448936,450042..450125,450554..451919)
location: region:397996-451919:1
so has part: feature:397996-398401:1:exon
so has part: feature:410757-410912:1:exon
so has part: feature:423508-424362:1:exon
so has part: feature:426377-426476:1:exon
so has part: feature:429523-429780:1:exon
so has part: feature:435170-435295:1:exon
so has part: feature:435376-435464:1:exon
so has part: feature:440938-441078:1:exon
so has part: feature:441725-441811:1:exon
so has part: feature:444515-444669:1:exon
so has part: feature:446467-446621:1:exon
so has part: feature:448809-448936:1:exon
so has part: feature:450042-450125:1:exon
so has part: feature:450554-451919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397996-398401:1:exon

position:398401:1
position: 398401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:410757-410912:1:exon

position:410757:1
position: 410757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:410912:1
position: 410912
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:423508-424362:1:exon

position:423508:1
position: 423508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424362:1
position: 424362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426377-426476:1:exon

position:426377:1
position: 426377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:426476:1
position: 426476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:429523-429780:1:exon

position:429523:1
position: 429523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:429780:1
position: 429780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:435170-435295:1:exon

position:435170:1
position: 435170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435295:1
position: 435295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:435376-435464:1:exon

position:435376:1
position: 435376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435464:1
position: 435464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:440938-441078:1:exon

position:440938:1
position: 440938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441078:1
position: 441078
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:441725-441811:1:exon

position:441725:1
position: 441725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441811:1
position: 441811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:444515-444669:1:exon

position:444515:1
position: 444515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:444669:1
position: 444669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:446467-446621:1:exon

position:446467:1
position: 446467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446621:1
position: 446621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:448809-448936:1:exon

position:448809:1
position: 448809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448936:1
position: 448936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:450042-450125:1:exon

position:450042:1
position: 450042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450125:1
position: 450125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:450554-451919:1:exon

position:450554:1
position: 450554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MPHOSPH8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MPHOSPH8
product: M-phase phosphoprotein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036831373.1
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(397996..398401,410757..410912,423508..424350,426377..426476,429523..429780,435170..435295,435376..435464,440938..441078,441725..441811,444515..444669,446467..446621,448809..448936,450042..450125,450554..451919)
location: region:397996-451919:1
so has part: feature:397996-398401:1:exon
so has part: feature:410757-410912:1:exon
so has part: feature:423508-424350:1:exon
so has part: feature:426377-426476:1:exon
so has part: feature:429523-429780:1:exon
so has part: feature:435170-435295:1:exon
so has part: feature:435376-435464:1:exon
so has part: feature:440938-441078:1:exon
so has part: feature:441725-441811:1:exon
so has part: feature:444515-444669:1:exon
so has part: feature:446467-446621:1:exon
so has part: feature:448809-448936:1:exon
so has part: feature:450042-450125:1:exon
so has part: feature:450554-451919:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:397996-398401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410757-410912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423508-424350:1:exon

position:424350:1
position: 424350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:426377-426476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:429523-429780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435170-435295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:435376-435464:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440938-441078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441725-441811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444515-444669:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446467-446621:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448809-448936:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450042-450125:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450554-451919:1:exon

MPHOSPH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase phosphoprotein 8 isoform X1
translation: MAAAEAEAEGSSAAAVPGSGADGSGQSPGVEGEGGAALGREKDEAAQGAEAVGDSEDDGEDVFEVEKILDMKVEGGKIVYKVRWKGYTPDDDTWEPEVHLEDCKEVLLEFRKKVAENKAKPVKKDVQRLPLNNDIFEANSDSDQQSETNEDTSSKKKKKKLRQKEEKSPDDLKKKKAKTGKLKDKPKPDLESSSESLVFDLRTKKRILEAKEELKESKKPKKDDIKETKEVKKVKKGEIRDLKTKRREDSKENRKTKKEKCVESQVDFELSVLNDSPFQEEDSEDLHSDNRSEKQPIKAAKDKAEPEAIQDTISDKQQDGTVSADEDDVKAKRKKKKLRRTEELKESKKLENKSLSEKKNTQKKQRNPDKGRSSAELDKPMAASAPAQKSSRPCVEERGSRPADSPGEVSTEEKETKKNEPKEKYPKKHDLDKEEKGRKEPKALKTFKEIRNAFDLFKLTPEEKNDFPENNRKREEVPQDCKVTEDHKTKENKQLLKERRNTRDETDTWAYIAAEGGQEVVDSTSQADENSDGRQQILSFGMDLQLEWMKLEDFQKHLDGEDENFKTANAIPSNVLRDAVKNGDYITVKVALNSSEEYNLDQEDSSGMTLVMLAAAGGQDDLLRLLLRKGAKVNGRQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSALHFAKQCNNVLVYDLLKNHLETLSRVAEETIKDYFEARLALLEPVFPIACHRLCEGPDFSMDFNYRTPQNIPEGSGVLLFIFHANFLGKEVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPAAGLNKLFIRLTEAPSAKVKLLIGAYRVQLQ
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(398177..398401,410757..410912,423508..424362,426377..426476,429523..429780,435170..435295,435376..435464,440938..441078,441725..441811,444515..444669,446467..446621,448809..448936,450042..450125,450554..450595)
location: region:398177-450595:1
so has part: feature:398177-398401:1:exon
so has part: feature:410757-410912:1:exon
so has part: feature:423508-424362:1:exon
so has part: feature:426377-426476:1:exon
so has part: feature:429523-429780:1:exon
so has part: feature:435170-435295:1:exon
so has part: feature:435376-435464:1:exon
so has part: feature:440938-441078:1:exon
so has part: feature:441725-441811:1:exon
so has part: feature:444515-444669:1:exon
so has part: feature:446467-446621:1:exon
so has part: feature:448809-448936:1:exon
so has part: feature:450042-450125:1:exon
so has part: feature:450554-450595:1:exon

XP_036687267.1
type: Protein
SIO_000068: ncbiprotein

position:398177:1
position: 398177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450595:1
position: 450595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:398177-398401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410757-410912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423508-424362:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426377-426476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:429523-429780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435170-435295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:435376-435464:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440938-441078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441725-441811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444515-444669:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446467-446621:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448809-448936:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450042-450125:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450554-450595:1:exon

MPHOSPH8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MPHOSPH8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: M-phase phosphoprotein 8 isoform X2
translation: MAAAEAEAEGSSAAAVPGSGADGSGQSPGVEGEGGAALGREKDEAAQGAEAVGDSEDDGEDVFEVEKILDMKVEGGKIVYKVRWKGYTPDDDTWEPEVHLEDCKEVLLEFRKKVAENKAKPVKKDVQRLPLNNDIFEANSDSDQQSETNEDTSSKKKKKKLRQKEEKSPDDLKKKKAKTGKLKDKPKPDLESSSESLVFDLRTKKRILEAKEELKESKKPKKDDIKETKEVKKVKKGEIRDLKTKRREDSKENRKTKKEKCVESQVDFELSVLNDSPFQEEDSEDLHSDNRSEKQPIKAAKDKAEPEAIQDTISDKQQDGTVSADEDDVKAKRKKKKLRRTEELKESKKLENKSLSEKKNTQKKQRNPDKGRSSAELDKPMAASAPAQKSSRPCVEERGSRPADSPGEEKETKKNEPKEKYPKKHDLDKEEKGRKEPKALKTFKEIRNAFDLFKLTPEEKNDFPENNRKREEVPQDCKVTEDHKTKENKQLLKERRNTRDETDTWAYIAAEGGQEVVDSTSQADENSDGRQQILSFGMDLQLEWMKLEDFQKHLDGEDENFKTANAIPSNVLRDAVKNGDYITVKVALNSSEEYNLDQEDSSGMTLVMLAAAGGQDDLLRLLLRKGAKVNGRQKNGTTALIHAAEKNFLTTVAILLEAGAFVNVQQSNGETALMKACKRGNSDIVRLVIECGADCNILSKHQNSALHFAKQCNNVLVYDLLKNHLETLSRVAEETIKDYFEARLALLEPVFPIACHRLCEGPDFSMDFNYRTPQNIPEGSGVLLFIFHANFLGKEVIARLCGPCSVQAVVLNDKFQLPVFLDSHFVYSFSPAAGLNKLFIRLTEAPSAKVKLLIGAYRVQLQ
SIO_010081: MPHOSPH8
subclass of: SO_0000673
so part of: MPHOSPH8
location: join(398177..398401,410757..410912,423508..424350,426377..426476,429523..429780,435170..435295,435376..435464,440938..441078,441725..441811,444515..444669,446467..446621,448809..448936,450042..450125,450554..450595)
location: region:398177-450595:1
so has part: feature:398177-398401:1:exon
so has part: feature:410757-410912:1:exon
so has part: feature:423508-424350:1:exon
so has part: feature:426377-426476:1:exon
so has part: feature:429523-429780:1:exon
so has part: feature:435170-435295:1:exon
so has part: feature:435376-435464:1:exon
so has part: feature:440938-441078:1:exon
so has part: feature:441725-441811:1:exon
so has part: feature:444515-444669:1:exon
so has part: feature:446467-446621:1:exon
so has part: feature:448809-448936:1:exon
so has part: feature:450042-450125:1:exon
so has part: feature:450554-450595:1:exon

XP_036687268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:398177-398401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:410757-410912:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:423508-424350:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:426377-426476:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:429523-429780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:435170-435295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:435376-435464:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:440938-441078:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:441725-441811:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:444515-444669:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:446467-446621:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:448809-448936:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:450042-450125:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:450554-450595:1:exon

LOC118884128
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <427584..427883
location: region:427584-427883:1
so has part: feature:427584-427883:1:exon
subclass of: SO_0000010

118884128
type: Gene
SIO_000068: ncbigene

position:427584:1
position: 427584
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:427883:1
position: 427883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427584-427883:1:exon

LOC118884128
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LOC118884128
product: protein kish-A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036831500.1
SIO_010081: LOC118884128
subclass of: SO_0000673
so part of: LOC118884128
location: <427584..427883
location: region:427584-427883:1
so has part: feature:427584-427883:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:427584-427883:1:exon

LOC118884128
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LOC118884128
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein kish-A-like
translation: CGLTGLTVSAIFNFHSLLTVILLLMCTCAYIGCLAPSLLDRNKAGLLGILWKCARIDERESPYIAVCCGAMAFSILFIQ
SIO_010081: LOC118884128
subclass of: SO_0000673
so part of: LOC118884128
location: <427584..427823
location: region:427584-427823:1
so has part: feature:427584-427823:1:exon

XP_036687395.1
type: Protein
SIO_000068: ncbiprotein

position:427823:1
position: 427823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427584-427823:1:exon

LOC118884038
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(446871..454256)
location: region:446871-454256:-1
so has part: feature:446871-454256:-1:exon
subclass of: SO_0000011

118884038
type: Gene
SIO_000068: ncbigene

position:446871:-1
position: 446871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:454256:-1
position: 454256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446871-454256:-1:exon

LOC118884038
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884038
product: uncharacterized LOC118884038
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005017173.1
SIO_010081: LOC118884038
subclass of: SO_0000673
so part of: LOC118884038
location: complement(join(446871..448092,453629..454256))
location: region:446871-454256:-1
so has part: feature:453629-454256:-1:exon
so has part: feature:446871-448092:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:453629-454256:-1:exon

position:453629:-1
position: 453629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:446871-448092:-1:exon

position:448092:-1
position: 448092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(482630..545864)
location: region:482630-545864:-1
so has part: feature:482630-545864:-1:exon
subclass of: SO_0000010

118884037
type: Gene
SIO_000068: ncbigene

position:482630:-1
position: 482630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545864:-1
position: 545864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:482630-545864:-1:exon

PSPC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: PSPC1
product: paraspeckle component 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036831374.1
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(482630..483097,485259..485428,488829..488886,511943..512048,519265..519349,528080..528276,531291..531386,538533..538834,545350..545864))
location: region:482630-545864:-1
so has part: feature:545350-545864:-1:exon
so has part: feature:538533-538834:-1:exon
so has part: feature:531291-531386:-1:exon
so has part: feature:528080-528276:-1:exon
so has part: feature:519265-519349:-1:exon
so has part: feature:511943-512048:-1:exon
so has part: feature:488829-488886:-1:exon
so has part: feature:485259-485428:-1:exon
so has part: feature:482630-483097:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:545350-545864:-1:exon

position:545350:-1
position: 545350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:538533-538834:-1:exon

position:538533:-1
position: 538533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:538834:-1
position: 538834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:531291-531386:-1:exon

position:531291:-1
position: 531291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:531386:-1
position: 531386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528080-528276:-1:exon

position:528080:-1
position: 528080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:528276:-1
position: 528276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:519265-519349:-1:exon

position:519265:-1
position: 519265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:519349:-1
position: 519349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:511943-512048:-1:exon

position:511943:-1
position: 511943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:512048:-1
position: 512048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:488829-488886:-1:exon

position:488829:-1
position: 488829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488886:-1
position: 488886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:485259-485428:-1:exon

position:485259:-1
position: 485259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:485428:-1
position: 485428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:482630-483097:-1:exon

position:483097:-1
position: 483097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSPC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: PSPC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: paraspeckle component 1
translation: MMLRGNLKQVRIEKNPARLRALESAAGEGEPAAMALALPGEPPAPAVPAEDRPAEEGGFTIDIKSFLKPGEKTYTQRCRLFVGNLPTDITEDDFKRLFERYGEPSEVFINREPRLRLHRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVEKAVVVVDDRGRATGKGFVEFAAKPPARKALERCGDGAFLLTTTPRPVIVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMIRHREQEELRRQQEGFKPNYMENREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTIPGPPMGPGPAMGPEGAANMGTPMMPDNGAVHNDRFPQGPPSQMGSPMGSRTGSETPQAPMSGVGPGSGGPGGFGRGSQGGNFEGPNKRRRY
SIO_010081: PSPC1
subclass of: SO_0000673
so part of: PSPC1
location: complement(join(482912..483097,485259..485428,488829..488886,511943..512048,519265..519349,528080..528276,531291..531386,538533..538834,545350..545709))
location: region:482912-545709:-1
so has part: feature:545350-545709:-1:exon
so has part: feature:538533-538834:-1:exon
so has part: feature:531291-531386:-1:exon
so has part: feature:528080-528276:-1:exon
so has part: feature:519265-519349:-1:exon
so has part: feature:511943-512048:-1:exon
so has part: feature:488829-488886:-1:exon
so has part: feature:485259-485428:-1:exon
so has part: feature:482912-483097:-1:exon

XP_036687269.1
type: Protein
SIO_000068: ncbiprotein

position:482912:-1
position: 482912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545709:-1
position: 545709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545350-545709:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:538533-538834:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:531291-531386:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528080-528276:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:519265-519349:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:511943-512048:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:488829-488886:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:485259-485428:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:482912-483097:-1:exon

ZMYM5
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: ZMYM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(557689..591364)
location: region:557689-591364:-1
so has part: feature:557689-591364:-1:exon
subclass of: SO_0000010

118884385
type: Gene
SIO_000068: ncbigene

position:557689:-1
position: 557689
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591364:-1
position: 591364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:557689-591364:-1:exon

ZMYM5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZMYM5
product: zinc finger MYM-type containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036832035.1
SIO_010081: ZMYM5
subclass of: SO_0000673
so part of: ZMYM5
location: complement(join(557689..559070,570024..570236,571542..571704,572401..572686,583536..583629,583868..584357,590488..590556,590865..591364))
location: region:557689-591364:-1
so has part: feature:590865-591364:-1:exon
so has part: feature:590488-590556:-1:exon
so has part: feature:583868-584357:-1:exon
so has part: feature:583536-583629:-1:exon
so has part: feature:572401-572686:-1:exon
so has part: feature:571542-571704:-1:exon
so has part: feature:570024-570236:-1:exon
so has part: feature:557689-559070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:590865-591364:-1:exon

position:590865:-1
position: 590865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:590488-590556:-1:exon

position:590488:-1
position: 590488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590556:-1
position: 590556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:583868-584357:-1:exon

position:583868:-1
position: 583868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584357:-1
position: 584357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:583536-583629:-1:exon

position:583536:-1
position: 583536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583629:-1
position: 583629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:572401-572686:-1:exon

position:572401:-1
position: 572401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572686:-1
position: 572686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:571542-571704:-1:exon

position:571542:-1
position: 571542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:571704:-1
position: 571704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:570024-570236:-1:exon

position:570024:-1
position: 570024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:570236:-1
position: 570236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:557689-559070:-1:exon

position:559070:-1
position: 559070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZMYM5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZMYM5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 5
translation: MGEGGPRSLPPTRDKRPAARPPSPLPHRGLGLPAAPLMSQAPWRAARGLRECGRGREGRVRRPAAAAAGVARGRPRRGQGGGAPPWALGAALAPSQRRRRREVPKFGGEGAGRPRRSPPLPPGPRRAASSRHSLSGRVSNGGRGAGRSRASGQCGGFRPAATRAARETRNRLQASLVDVCPKLRRTASPLFFGIDKCSAGGLDLTEQTPVLLGNKAMAASFMDVAFGDPASPLVNRSRNSSAEDDDDDVVFIESIQPPSSSAPVIADQRNFIFAASRNEKLQGNYSIILPSSRDLASQKGSVSETIVIDDEEDMETDGREKTISSSFIEWALPGSKNRTKDLDFSTSSLSRSKTKTAVGPFNPGRMNVAGDVFQNGGFTAHHSPDSWISQSASFPRNQKQPGVDSLSPVGSLPKQIFQPSAQQQPTKPAKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKRTPKKRNVTCKKGAPAKKATLVPQGESSESFQKFCSTSSSPSEDNQNLRKRVLNKSRCTVCSKLTEIRHEVSVNNVTHKLCSNQCFNKYRLANGLVMNCCEQCGEYLPSKGAGNNLLVIEGQQMRFCCQSCANEYKQMMETNSKKVLASENRKRNAVREENERELYGSLNILLEKIERIPVKKEKTSELQVSAECSQDTSLVQQDVNLPPSVSTIADKFQEQLEEKQSEDSIIPAVLSADPGTWPRVLSIKERDTLVENDPPQVRNFNFPKDSTGRKFSETYYTRILPNGEKTTRSWLLYSISKDSVFCLYCRLFGEGKNQLKNENGCKDWQHLSHILSKHEESEMHINNSVKYSKLKSDLNKSKTVEHRLQEKVGKEGVKLLYTLDPI
SIO_010081: ZMYM5
subclass of: SO_0000673
so part of: ZMYM5
location: complement(join(558312..559070,570024..570236,571542..571704,572401..572686,583536..583629,583868..584357,590488..590556,590865..591364))
location: region:558312-591364:-1
so has part: feature:590865-591364:-1:exon
so has part: feature:590488-590556:-1:exon
so has part: feature:583868-584357:-1:exon
so has part: feature:583536-583629:-1:exon
so has part: feature:572401-572686:-1:exon
so has part: feature:571542-571704:-1:exon
so has part: feature:570024-570236:-1:exon
so has part: feature:558312-559070:-1:exon

XP_036687930.1
type: Protein
SIO_000068: ncbiprotein

position:558312:-1
position: 558312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:590865-591364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:590488-590556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:583868-584357:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:583536-583629:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:572401-572686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:571542-571704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:570024-570236:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:558312-559070:-1:exon

LOC118884471
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884471
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 634179..634285
location: region:634179-634285:1
so has part: feature:634179-634285:1:exon
subclass of: SO_0000623

118884471
type: Gene
SIO_000068: ncbigene

position:634179:1
position: 634179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634285:1
position: 634285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634179-634285:1:exon

LOC118884471
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: snRNA
gene: LOC118884471
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005017304.1
SIO_010081: LOC118884471
subclass of: SO_0000673
so part of: LOC118884471
location: 634179..634285
location: region:634179-634285:1
so has part: feature:634179-634285:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634179-634285:1:exon

ZMYM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 650829..741004
location: region:650829-741004:1
so has part: feature:650829-741004:1:exon
subclass of: SO_0000010

118883980
type: Gene
SIO_000068: ncbigene

position:650829:1
position: 650829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:741004:1
position: 741004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:650829-741004:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036831177.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(650829..650893,651941..652009,676939..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..741004)
location: region:650829-741004:1
so has part: feature:650829-650893:1:exon
so has part: feature:651941-652009:1:exon
so has part: feature:676939-677795:1:exon
so has part: feature:682803-683088:1:exon
so has part: feature:684427-684592:1:exon
so has part: feature:685380-685592:1:exon
so has part: feature:698176-698247:1:exon
so has part: feature:702949-703099:1:exon
so has part: feature:703561-703676:1:exon
so has part: feature:706440-706556:1:exon
so has part: feature:708347-708497:1:exon
so has part: feature:710767-710939:1:exon
so has part: feature:717821-717986:1:exon
so has part: feature:718633-718667:1:exon
so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-741004:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:650829-650893:1:exon

position:650893:1
position: 650893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:651941-652009:1:exon

position:651941:1
position: 651941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:652009:1
position: 652009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:676939-677795:1:exon

position:676939:1
position: 676939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:677795:1
position: 677795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:682803-683088:1:exon

position:682803:1
position: 682803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:683088:1
position: 683088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:684427-684592:1:exon

position:684427:1
position: 684427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:684592:1
position: 684592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:685380-685592:1:exon

position:685380:1
position: 685380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:685592:1
position: 685592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:698176-698247:1:exon

position:698176:1
position: 698176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:698247:1
position: 698247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:702949-703099:1:exon

position:702949:1
position: 702949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703099:1
position: 703099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:703561-703676:1:exon

position:703561:1
position: 703561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:703676:1
position: 703676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:706440-706556:1:exon

position:706440:1
position: 706440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:706556:1
position: 706556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:708347-708497:1:exon

position:708347:1
position: 708347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:708497:1
position: 708497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:710767-710939:1:exon

position:710767:1
position: 710767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:710939:1
position: 710939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:717821-717986:1:exon

position:717821:1
position: 717821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:717986:1
position: 717986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:718633-718667:1:exon

position:718633:1
position: 718633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718667:1
position: 718667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:723819-723948:1:exon

position:723819:1
position: 723819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723948:1
position: 723948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:724900-725015:1:exon

position:724900:1
position: 724900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725015:1
position: 725015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:725624-725792:1:exon

position:725624:1
position: 725624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725792:1
position: 725792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:727022-727147:1:exon

position:727022:1
position: 727022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:727147:1
position: 727147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:727957-728051:1:exon

position:727957:1
position: 727957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728051:1
position: 728051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:729309-729477:1:exon

position:729309:1
position: 729309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729477:1
position: 729477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:730359-730510:1:exon

position:730359:1
position: 730359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730510:1
position: 730510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:735530-735644:1:exon

position:735530:1
position: 735530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:735644:1
position: 735644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:736273-736524:1:exon

position:736273:1
position: 736273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:736524:1
position: 736524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
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ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036831180.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
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location: region:650900-741004:1
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SIO_000628: feature:738216-741004:1:exon

ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036831181.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
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location: region:650900-741004:1
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ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036831178.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
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location: region:651033-741004:1
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ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036831176.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
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location: region:651033-741004:1
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urn:…
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ZMYM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZMYM2
product: zinc finger MYM-type containing 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_036831179.1
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(651034..651182,651941..652009,676939..677440,677702..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..741004)
location: region:651034-741004:1
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so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-741004:1:exon

position:651034:1
position: 651034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:651034-651182:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:651941-652009:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:676939-677440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:677702-677795:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:682803-683088:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:684427-684592:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:685380-685592:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:698176-698247:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:702949-703099:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:703561-703676:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:706440-706556:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:708347-708497:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:710767-710939:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:717821-717986:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:718633-718667:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:723819-723948:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:724900-725015:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:725624-725792:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:727022-727147:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:727957-728051:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:729309-729477:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:730359-730510:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:735530-735644:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:736273-736524:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:736816-736936:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:738216-741004:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X1
translation: MDAGSSGGVEVADQTPVLLGRTAMAASLTDAGHSFSGPPNPLVSRASKLQNSAVEDDDDVVFIEPVQPPPPSAPVVADQRAVTFTSSKNEELQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPESKNRTNDVDFSTSSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVSDGQLENTDGRDMNLMITHVTSLQNTSLGDVSNGLQSSNFGVNLQTYTPSLTSQTKTAVGPFNPGRMNVAGDVFQNGESAAHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPGFLKEVRDHMQDSFFMQPEKYGKLTTCTGCRAQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTRYAKPQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCRRFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQSKSCQTDGEWRTEYVPVPIPVPVYVPVPMHMYSQSIPVPMTVPVPVPVPVFLPAPSASSEKVPAAAQELKSTVSSDALGAELPTVADVAEDEGKAEGADIHSVIIETDIIGSDLLKNSDPETQSNMPDVPYEPHLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQCHDDSSDNSECSFPFKYTYGVNAWKHWVRARQLDEDLLVLDELKSPKSVKLKEDLLCHTTAELDYGLAHFVKEIRRPNGENYAPDSIYYLCLGIQEYLYGSNRKDNIFIDPGFQTFEQEMNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPERSSSADSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTE
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(676949..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..738408)
location: region:676949-738408:1
so has part: feature:676949-677795:1:exon
so has part: feature:682803-683088:1:exon
so has part: feature:684427-684592:1:exon
so has part: feature:685380-685592:1:exon
so has part: feature:698176-698247:1:exon
so has part: feature:702949-703099:1:exon
so has part: feature:703561-703676:1:exon
so has part: feature:706440-706556:1:exon
so has part: feature:708347-708497:1:exon
so has part: feature:710767-710939:1:exon
so has part: feature:717821-717986:1:exon
so has part: feature:718633-718667:1:exon
so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-738408:1:exon

XP_036687071.1
type: Protein
SIO_000068: ncbiprotein

position:676949:1
position: 676949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:738408:1
position: 738408
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:676949-677795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682803-683088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684427-684592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685380-685592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698176-698247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702949-703099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703561-703676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706440-706556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708347-708497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710767-710939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717821-717986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718633-718667:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723819-723948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724900-725015:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:725624-725792:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:727022-727147:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727957-728051:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:729309-729477:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:730359-730510:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:735530-735644:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:736273-736524:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:736816-736936:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:738216-738408:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X1
translation: MDAGSSGGVEVADQTPVLLGRTAMAASLTDAGHSFSGPPNPLVSRASKLQNSAVEDDDDVVFIEPVQPPPPSAPVVADQRAVTFTSSKNEELQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPESKNRTNDVDFSTSSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVSDGQLENTDGRDMNLMITHVTSLQNTSLGDVSNGLQSSNFGVNLQTYTPSLTSQTKTAVGPFNPGRMNVAGDVFQNGESAAHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPGFLKEVRDHMQDSFFMQPEKYGKLTTCTGCRAQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTRYAKPQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCRRFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQSKSCQTDGEWRTEYVPVPIPVPVYVPVPMHMYSQSIPVPMTVPVPVPVPVFLPAPSASSEKVPAAAQELKSTVSSDALGAELPTVADVAEDEGKAEGADIHSVIIETDIIGSDLLKNSDPETQSNMPDVPYEPHLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQCHDDSSDNSECSFPFKYTYGVNAWKHWVRARQLDEDLLVLDELKSPKSVKLKEDLLCHTTAELDYGLAHFVKEIRRPNGENYAPDSIYYLCLGIQEYLYGSNRKDNIFIDPGFQTFEQEMNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPERSSSADSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTE
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(676949..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..738408)
location: region:676949-738408:1
so has part: feature:676949-677795:1:exon
so has part: feature:682803-683088:1:exon
so has part: feature:684427-684592:1:exon
so has part: feature:685380-685592:1:exon
so has part: feature:698176-698247:1:exon
so has part: feature:702949-703099:1:exon
so has part: feature:703561-703676:1:exon
so has part: feature:706440-706556:1:exon
so has part: feature:708347-708497:1:exon
so has part: feature:710767-710939:1:exon
so has part: feature:717821-717986:1:exon
so has part: feature:718633-718667:1:exon
so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-738408:1:exon

XP_036687072.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676949-677795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682803-683088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684427-684592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685380-685592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698176-698247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702949-703099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703561-703676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706440-706556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708347-708497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710767-710939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717821-717986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718633-718667:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723819-723948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724900-725015:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:725624-725792:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:727022-727147:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727957-728051:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:729309-729477:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:730359-730510:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:735530-735644:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:736273-736524:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:736816-736936:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:738216-738408:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X1
translation: MDAGSSGGVEVADQTPVLLGRTAMAASLTDAGHSFSGPPNPLVSRASKLQNSAVEDDDDVVFIEPVQPPPPSAPVVADQRAVTFTSSKNEELQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPESKNRTNDVDFSTSSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVSDGQLENTDGRDMNLMITHVTSLQNTSLGDVSNGLQSSNFGVNLQTYTPSLTSQTKTAVGPFNPGRMNVAGDVFQNGESAAHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPGFLKEVRDHMQDSFFMQPEKYGKLTTCTGCRAQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTRYAKPQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCRRFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQSKSCQTDGEWRTEYVPVPIPVPVYVPVPMHMYSQSIPVPMTVPVPVPVPVFLPAPSASSEKVPAAAQELKSTVSSDALGAELPTVADVAEDEGKAEGADIHSVIIETDIIGSDLLKNSDPETQSNMPDVPYEPHLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQCHDDSSDNSECSFPFKYTYGVNAWKHWVRARQLDEDLLVLDELKSPKSVKLKEDLLCHTTAELDYGLAHFVKEIRRPNGENYAPDSIYYLCLGIQEYLYGSNRKDNIFIDPGFQTFEQEMNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPERSSSADSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTE
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(676949..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..738408)
location: region:676949-738408:1
so has part: feature:676949-677795:1:exon
so has part: feature:682803-683088:1:exon
so has part: feature:684427-684592:1:exon
so has part: feature:685380-685592:1:exon
so has part: feature:698176-698247:1:exon
so has part: feature:702949-703099:1:exon
so has part: feature:703561-703676:1:exon
so has part: feature:706440-706556:1:exon
so has part: feature:708347-708497:1:exon
so has part: feature:710767-710939:1:exon
so has part: feature:717821-717986:1:exon
so has part: feature:718633-718667:1:exon
so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-738408:1:exon

XP_036687073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676949-677795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682803-683088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684427-684592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685380-685592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698176-698247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702949-703099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703561-703676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706440-706556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708347-708497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710767-710939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717821-717986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718633-718667:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723819-723948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724900-725015:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:725624-725792:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:727022-727147:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727957-728051:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:729309-729477:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:730359-730510:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:735530-735644:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:736273-736524:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:736816-736936:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:738216-738408:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X1
translation: MDAGSSGGVEVADQTPVLLGRTAMAASLTDAGHSFSGPPNPLVSRASKLQNSAVEDDDDVVFIEPVQPPPPSAPVVADQRAVTFTSSKNEELQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPESKNRTNDVDFSTSSFSRSKVNAGMGNSGITTEPDSEIQIANVTTLETGVSSVSDGQLENTDGRDMNLMITHVTSLQNTSLGDVSNGLQSSNFGVNLQTYTPSLTSQTKTAVGPFNPGRMNVAGDVFQNGESAAHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPGFLKEVRDHMQDSFFMQPEKYGKLTTCTGCRAQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTRYAKPQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCRRFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQSKSCQTDGEWRTEYVPVPIPVPVYVPVPMHMYSQSIPVPMTVPVPVPVPVFLPAPSASSEKVPAAAQELKSTVSSDALGAELPTVADVAEDEGKAEGADIHSVIIETDIIGSDLLKNSDPETQSNMPDVPYEPHLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQCHDDSSDNSECSFPFKYTYGVNAWKHWVRARQLDEDLLVLDELKSPKSVKLKEDLLCHTTAELDYGLAHFVKEIRRPNGENYAPDSIYYLCLGIQEYLYGSNRKDNIFIDPGFQTFEQEMNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPERSSSADSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTE
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(676949..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..738408)
location: region:676949-738408:1
so has part: feature:676949-677795:1:exon
so has part: feature:682803-683088:1:exon
so has part: feature:684427-684592:1:exon
so has part: feature:685380-685592:1:exon
so has part: feature:698176-698247:1:exon
so has part: feature:702949-703099:1:exon
so has part: feature:703561-703676:1:exon
so has part: feature:706440-706556:1:exon
so has part: feature:708347-708497:1:exon
so has part: feature:710767-710939:1:exon
so has part: feature:717821-717986:1:exon
so has part: feature:718633-718667:1:exon
so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-738408:1:exon

XP_036687075.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676949-677795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682803-683088:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:684427-684592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:685380-685592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:698176-698247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:702949-703099:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:703561-703676:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:706440-706556:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:708347-708497:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:710767-710939:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:717821-717986:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:718633-718667:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:723819-723948:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:724900-725015:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:725624-725792:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:727022-727147:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727957-728051:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:729309-729477:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:730359-730510:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:735530-735644:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:736273-736524:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:736816-736936:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:738216-738408:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X2
translation: MDAGSSGGVEVADQTPVLLGRTAMAASLTDAGHSFSGPPNPLVSRASKLQNSAVEDDDDVVFIEPVQPPPPSAPVVADQRAVTFTSSKNEELQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPESKNRTNDVDFSTSSFSRSKTKTAVGPFNPGRMNVAGDVFQNGESAAHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPGFLKEVRDHMQDSFFMQPEKYGKLTTCTGCRAQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTRYAKPQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCRRFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQSKSCQTDGEWRTEYVPVPIPVPVYVPVPMHMYSQSIPVPMTVPVPVPVPVFLPAPSASSEKVPAAAQELKSTVSSDALGAELPTVADVAEDEGKAEGADIHSVIIETDIIGSDLLKNSDPETQSNMPDVPYEPHLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQCHDDSSDNSECSFPFKYTYGVNAWKHWVRARQLDEDLLVLDELKSPKSVKLKEDLLCHTTAELDYGLAHFVKEIRRPNGENYAPDSIYYLCLGIQEYLYGSNRKDNIFIDPGFQTFEQEMNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPERSSSADSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTE
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(676949..677440,677702..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..738408)
location: region:676949-738408:1
so has part: feature:676949-677440:1:exon
so has part: feature:677702-677795:1:exon
so has part: feature:682803-683088:1:exon
so has part: feature:684427-684592:1:exon
so has part: feature:685380-685592:1:exon
so has part: feature:698176-698247:1:exon
so has part: feature:702949-703099:1:exon
so has part: feature:703561-703676:1:exon
so has part: feature:706440-706556:1:exon
so has part: feature:708347-708497:1:exon
so has part: feature:710767-710939:1:exon
so has part: feature:717821-717986:1:exon
so has part: feature:718633-718667:1:exon
so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-738408:1:exon

XP_036687074.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676949-677440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677702-677795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682803-683088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684427-684592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685380-685592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698176-698247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702949-703099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703561-703676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706440-706556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708347-708497:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:710767-710939:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:717821-717986:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:718633-718667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723819-723948:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:724900-725015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:725624-725792:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727022-727147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727957-728051:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:729309-729477:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:730359-730510:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:735530-735644:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:736273-736524:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:736816-736936:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:738216-738408:1:exon

ZMYM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZMYM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger MYM-type protein 2 isoform X2
translation: MDAGSSGGVEVADQTPVLLGRTAMAASLTDAGHSFSGPPNPLVSRASKLQNSAVEDDDDVVFIEPVQPPPPSAPVVADQRAVTFTSSKNEELQGNDSKILPSSKELASQKGSVSETIVIDDEEDMETNQGQEKNSSNFIERRPPESKNRTNDVDFSTSSFSRSKTKTAVGPFNPGRMNVAGDVFQNGESAAHHNPDSWISQSASFPRNQKQPGVDSLSPVASLPKQIFQPSAQQQPTKPVKVTCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSFSHKPAPKKLCVMCKKDITTMKGTIVAQVDSSESFQEFCSTSCLSLYEDKQNPTKGALNKSRCTICGKLTEIRHEVSFKNMTHKLCSDHCFNRYRMANGLIMNCCEQCGEYLPSKGAGNNVLVIDGQQKRFCCQSCVSEYKQVGSHPGFLKEVRDHMQDSFFMQPEKYGKLTTCTGCRAQCRFFDMTQCIGPNGYMEPYCSTACMNSHKTRYAKPQSLGIICHFCKRNSLPQYQATMPDGKLYNFCNSNCVAKFQALSMQSSPNGQFVAPSDIQLKCNYCKNSFCSKPEILEWENKVHQFCSKTCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVKRPFCSEGCKLLYKQDFARRLGLRCVTCNYCSQLCKKGATKELDGVVRDFCSEDCCRRFQDWYYKAARCDCCKSQGTLRERVQWRGEMKHFCDQHCLLRFYCQQNEPNMTTQKGPENLHYDQGCQTSRTKMTGSAPPPSPTPNKEMKNKAVLCKPLTMTKATYCKPHMQSKSCQTDGEWRTEYVPVPIPVPVYVPVPMHMYSQSIPVPMTVPVPVPVPVFLPAPSASSEKVPAAAQELKSTVSSDALGAELPTVADVAEDEGKAEGADIHSVIIETDIIGSDLLKNSDPETQSNMPDVPYEPHLDIEIDFPRAAEELDMENEFLLPPVFGEEYEEQPRPRSKKKGAKRKAVSGYQCHDDSSDNSECSFPFKYTYGVNAWKHWVRARQLDEDLLVLDELKSPKSVKLKEDLLCHTTAELDYGLAHFVKEIRRPNGENYAPDSIYYLCLGIQEYLYGSNRKDNIFIDPGFQTFEQEMNKILRSWQPSILPDGSIFSRVEEDYLWRIKQLGSHSPVALLNTLFYFNTKYFGLKTVEQHLRLSFGTVFRHWKKNPLTMENKACLRYQVSSLCGTDNEDKITTGKRKHEDDEPVFEQIENTANPSRCPVKMFECYLSKSPQNLNQRMDVFYLQPERSSSADSPVWYTSASLDRNTLENMLVRVLLVKDIYDKDNYELDEDTE
SIO_010081: ZMYM2
subclass of: SO_0000673
so part of: ZMYM2
location: join(676949..677440,677702..677795,682803..683088,684427..684592,685380..685592,698176..698247,702949..703099,703561..703676,706440..706556,708347..708497,710767..710939,717821..717986,718633..718667,723819..723948,724900..725015,725624..725792,727022..727147,727957..728051,729309..729477,730359..730510,735530..735644,736273..736524,736816..736936,738216..738408)
location: region:676949-738408:1
so has part: feature:676949-677440:1:exon
so has part: feature:677702-677795:1:exon
so has part: feature:682803-683088:1:exon
so has part: feature:684427-684592:1:exon
so has part: feature:685380-685592:1:exon
so has part: feature:698176-698247:1:exon
so has part: feature:702949-703099:1:exon
so has part: feature:703561-703676:1:exon
so has part: feature:706440-706556:1:exon
so has part: feature:708347-708497:1:exon
so has part: feature:710767-710939:1:exon
so has part: feature:717821-717986:1:exon
so has part: feature:718633-718667:1:exon
so has part: feature:723819-723948:1:exon
so has part: feature:724900-725015:1:exon
so has part: feature:725624-725792:1:exon
so has part: feature:727022-727147:1:exon
so has part: feature:727957-728051:1:exon
so has part: feature:729309-729477:1:exon
so has part: feature:730359-730510:1:exon
so has part: feature:735530-735644:1:exon
so has part: feature:736273-736524:1:exon
so has part: feature:736816-736936:1:exon
so has part: feature:738216-738408:1:exon

XP_036687076.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:676949-677440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:677702-677795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:682803-683088:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:684427-684592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:685380-685592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:698176-698247:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:702949-703099:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:703561-703676:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:706440-706556:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:708347-708497:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:710767-710939:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:717821-717986:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:718633-718667:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:723819-723948:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:724900-725015:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:725624-725792:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:727022-727147:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:727957-728051:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:729309-729477:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:730359-730510:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:735530-735644:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:736273-736524:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:736816-736936:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:738216-738408:1:exon

GJA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(771190..786037)
location: region:771190-786037:-1
so has part: feature:771190-786037:-1:exon
subclass of: SO_0000010

118884215
type: Gene
SIO_000068: ncbigene

position:771190:-1
position: 771190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786037:-1
position: 786037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771190-786037:-1:exon

GJA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: GJA3
product: gap junction protein alpha 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831684.1
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(join(771190..772491,785907..786037))
location: region:771190-786037:-1
so has part: feature:785907-786037:-1:exon
so has part: feature:771190-772491:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785907-786037:-1:exon

position:785907:-1
position: 785907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:771190-772491:-1:exon

position:772491:-1
position: 772491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: GJA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction alpha-3 protein
translation: MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEEVWGDEQSDFTCNTQQPGCENVCYDRAFPISHVRFWVLQIIFVSTPTLIYLGHVLHLVRMEEKRKEREEERLKTDGAAPGQDRPPVRDDRGKVRLAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFQLKPLYRCDRWPCPNTVDCFISRPTEKTIFILFMLAVACVSLLLNMLEIYHLGWKKLKQGMTDPLPPDTPGSSVRAAKPGCGSPLLLPSHSNPPALTVGFPPYYAPSASSLGQASAPGYPEPPPPAALPGTPGEGHPAGSPGGHQHLLATAPNWADREAEQQTSAGKASPPASAPAAPKPPAGPQQPPPEGGAGSSGDSDGEGAVTAVELHAPPELPADPGRSSKASKSSGGRARPSDLAI
SIO_010081: GJA3
subclass of: SO_0000673
so part of: GJA3
location: complement(771242..772474)
location: region:771242-772474:-1
so has part: feature:771242-772474:-1:exon

XP_036687579.1
type: Protein
SIO_000068: ncbiprotein

position:771242:-1
position: 771242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772474:-1
position: 772474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:771242-772474:-1:exon

GJB2
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(802011..806562)
location: region:802011-806562:-1
so has part: feature:802011-806562:-1:exon
subclass of: SO_0000010

118884281
type: Gene
SIO_000068: ncbigene

position:802011:-1
position: 802011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806562:-1
position: 806562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802011-806562:-1:exon

GJB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: GJB2
product: gap junction protein beta 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036831818.1
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(join(802011..803401,806367..806562))
location: region:802011-806562:-1
so has part: feature:806367-806562:-1:exon
so has part: feature:802011-803401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806367-806562:-1:exon

position:806367:-1
position: 806367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802011-803401:-1:exon

position:803401:-1
position: 803401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: GJB2
product: gap junction protein beta 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036831817.1
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(join(802011..803401,806363..806562))
location: region:802011-806562:-1
so has part: feature:806363-806562:-1:exon
so has part: feature:802011-803401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:806363-806562:-1:exon

position:806363:-1
position: 806363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802011-803401:-1:exon

GJB2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: GJB2
product: gap junction protein beta 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 57 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831816.1
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(join(802011..803401,804349..805632))
location: region:802011-805632:-1
so has part: feature:804349-805632:-1:exon
so has part: feature:802011-803401:-1:exon

position:805632:-1
position: 805632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804349-805632:-1:exon

position:804349:-1
position: 804349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802011-803401:-1:exon

GJB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein isoform X1
translation: MKRPLAGGSANCPDEKMDWGTLHTFIGGVNKHSTSIGKVWLTVIFIFRVMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPVSHIRLWALQLIFVSTPALLVAMHVAHYRHEKKRKFMKGEIKSEFKDIEEIKSQKVRIEGSLWWTYTCSIFFRIIFEASFTYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSRKSKKPV
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(join(802699..803401,804349..804374))
location: region:802699-804374:-1
so has part: feature:804349-804374:-1:exon
so has part: feature:802699-803401:-1:exon

XP_036687711.1
type: Protein
SIO_000068: ncbiprotein

position:802699:-1
position: 802699
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:804374:-1
position: 804374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:804349-804374:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:802699-803401:-1:exon

GJB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein isoform X2
translation: MDWGTLHTFIGGVNKHSTSIGKVWLTVIFIFRVMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPVSHIRLWALQLIFVSTPALLVAMHVAHYRHEKKRKFMKGEIKSEFKDIEEIKSQKVRIEGSLWWTYTCSIFFRIIFEASFTYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSRKSKKPV
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(802699..803379)
location: region:802699-803379:-1
so has part: feature:802699-803379:-1:exon

XP_036687712.1
type: Protein
SIO_000068: ncbiprotein

position:803379:-1
position: 803379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:802699-803379:-1:exon

GJB2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: GJB2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-2 protein isoform X2
translation: MDWGTLHTFIGGVNKHSTSIGKVWLTVIFIFRVMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPVSHIRLWALQLIFVSTPALLVAMHVAHYRHEKKRKFMKGEIKSEFKDIEEIKSQKVRIEGSLWWTYTCSIFFRIIFEASFTYVFYVMYDGFSMQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSRKSKKPV
SIO_010081: GJB2
subclass of: SO_0000673
so part of: GJB2
location: complement(802699..803379)
location: region:802699-803379:-1
so has part: feature:802699-803379:-1:exon

XP_036687713.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:802699-803379:-1:exon

GJB6
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821893..829300)
location: region:821893-829300:-1
so has part: feature:821893-829300:-1:exon
subclass of: SO_0000010

118884261
type: Gene
SIO_000068: ncbigene

position:821893:-1
position: 821893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:829300:-1
position: 829300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821893-829300:-1:exon

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: GJB6
product: gap junction protein beta 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831791.1
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(821893..823399,823992..824193,829162..829300))
location: region:821893-829300:-1
so has part: feature:829162-829300:-1:exon
so has part: feature:823992-824193:-1:exon
so has part: feature:821893-823399:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:829162-829300:-1:exon

position:829162:-1
position: 829162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823992-824193:-1:exon

position:823992:-1
position: 823992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824193:-1
position: 824193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:821893-823399:-1:exon

position:823399:-1
position: 823399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: GJB6
product: gap junction protein beta 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831793.1
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(821893..823399,823992..824193,829224..829288))
location: region:821893-829288:-1
so has part: feature:829224-829288:-1:exon
so has part: feature:823992-824193:-1:exon
so has part: feature:821893-823399:-1:exon

position:829288:-1
position: 829288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:829224-829288:-1:exon

position:829224:-1
position: 829224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823992-824193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:821893-823399:-1:exon

GJB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: GJB6
product: gap junction protein beta 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 61 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831792.1
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(join(821893..823399,823992..824193,828577..828994))
location: region:821893-828994:-1
so has part: feature:828577-828994:-1:exon
so has part: feature:823992-824193:-1:exon
so has part: feature:821893-823399:-1:exon

position:828994:-1
position: 828994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:828577-828994:-1:exon

position:828577:-1
position: 828577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:823992-824193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:821893-823399:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWGTLHTFIGGVNKHSTSIGKVWLTVIFIFRVMILVVAAQEVWGDEQDDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHEAARQFRRGEKRGEFKDLEDIKRQKIRIEGSLWWTYTCSIFFRIIFEATFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRAKRAKTQRNPPNRALKESKQNEMNELISESGHNAVTGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(822599..823384)
location: region:822599-823384:-1
so has part: feature:822599-823384:-1:exon

XP_036687686.1
type: Protein
SIO_000068: ncbiprotein

position:822599:-1
position: 822599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:823384:-1
position: 823384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822599-823384:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWGTLHTFIGGVNKHSTSIGKVWLTVIFIFRVMILVVAAQEVWGDEQDDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHEAARQFRRGEKRGEFKDLEDIKRQKIRIEGSLWWTYTCSIFFRIIFEATFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRAKRAKTQRNPPNRALKESKQNEMNELISESGHNAVTGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(822599..823384)
location: region:822599-823384:-1
so has part: feature:822599-823384:-1:exon

XP_036687687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:822599-823384:-1:exon

GJB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: GJB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gap junction beta-6 protein
translation: MDWGTLHTFIGGVNKHSTSIGKVWLTVIFIFRVMILVVAAQEVWGDEQDDFVCNTLQPGCKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAYYRHEAARQFRRGEKRGEFKDLEDIKRQKIRIEGSLWWTYTCSIFFRIIFEATFMYVFYFLYNGYHLPWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYLLLKVCFRRAKRAKTQRNPPNRALKESKQNEMNELISESGHNAVTGFPS
SIO_010081: GJB6
subclass of: SO_0000673
so part of: GJB6
location: complement(822599..823384)
location: region:822599-823384:-1
so has part: feature:822599-823384:-1:exon

XP_036687688.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:822599-823384:-1:exon

CRYL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(911357..993314)
location: region:911357-993314:-1
so has part: feature:911357-993314:-1:exon
subclass of: SO_0000010

118884113
type: Gene
SIO_000068: ncbigene

position:911357:-1
position: 911357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993314:-1
position: 993314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:911357-993314:-1:exon

CRYL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: CRYL1
product: crystallin lambda 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 1 long SRA read, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036831477.1
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(911357..911914,912268..912374,917353..917458,930969..931163,934992..935153,967469..967595,985711..985818,993175..993314))
location: region:911357-993314:-1
so has part: feature:993175-993314:-1:exon
so has part: feature:985711-985818:-1:exon
so has part: feature:967469-967595:-1:exon
so has part: feature:934992-935153:-1:exon
so has part: feature:930969-931163:-1:exon
so has part: feature:917353-917458:-1:exon
so has part: feature:912268-912374:-1:exon
so has part: feature:911357-911914:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:993175-993314:-1:exon

position:993175:-1
position: 993175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:985711-985818:-1:exon

position:985711:-1
position: 985711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:985818:-1
position: 985818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:967469-967595:-1:exon

position:967469:-1
position: 967469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:967595:-1
position: 967595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:934992-935153:-1:exon

position:934992:-1
position: 934992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:935153:-1
position: 935153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:930969-931163:-1:exon

position:930969:-1
position: 930969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:931163:-1
position: 931163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:917353-917458:-1:exon

position:917353:-1
position: 917353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:917458:-1
position: 917458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:912268-912374:-1:exon

position:912268:-1
position: 912268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:912374:-1
position: 912374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:911357-911914:-1:exon

position:911914:-1
position: 911914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRYL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: CRYL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lambda-crystallin homolog
translation: MASPAFSAPGGVAVVGSGLIGRSWAMLFASAGFKVKLYDVEPRQVTHALDSIRKEMKSLEQSDSLKGSLGAEGQLSLISGCSDIREAVEGALHVQECVPENLELKKQLFAQLDGIVGDQVVLSSSSSCLLPSRLFSGLVHVKQCLVAHPVNPPYYVPLVELVPHPETAPATVDRTYALMRKIGQSPVRLTKEVDGFALNRLQYAVISEAWRLVEEGVVSPGDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGMKHVLKTFGPIPEFSGAAAEKVHQAMCVKVPDDPEHLAARREWRDRCLMRLARLKSQLQPQ
SIO_010081: CRYL1
subclass of: SO_0000673
so part of: CRYL1
location: complement(join(911801..911914,912268..912374,917353..917458,930969..931163,934992..935153,967469..967595,985711..985818,993175..993224))
location: region:911801-993224:-1
so has part: feature:993175-993224:-1:exon
so has part: feature:985711-985818:-1:exon
so has part: feature:967469-967595:-1:exon
so has part: feature:934992-935153:-1:exon
so has part: feature:930969-931163:-1:exon
so has part: feature:917353-917458:-1:exon
so has part: feature:912268-912374:-1:exon
so has part: feature:911801-911914:-1:exon

XP_036687372.1
type: Protein
SIO_000068: ncbiprotein

position:911801:-1
position: 911801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:993224:-1
position: 993224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:993175-993224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:985711-985818:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:967469-967595:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:934992-935153:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:930969-931163:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:917353-917458:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:912268-912374:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:911801-911914:-1:exon

LOC118884480
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884480
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 983580..983705
location: region:983580-983705:1
so has part: feature:983580-983705:1:exon
subclass of: SO_0000578

118884480
type: Gene
SIO_000068: ncbigene

position:983580:1
position: 983580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:983705:1
position: 983705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:983580-983705:1:exon

LOC118884480
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: snoRNA
gene: LOC118884480
product: small nucleolar RNA SNORD22
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00099
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005017311.1
SIO_010081: LOC118884480
subclass of: SO_0000673
so part of: LOC118884480
location: 983580..983705
location: region:983580-983705:1
so has part: feature:983580-983705:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:983580-983705:1:exon

IFT88
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: IFT88
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1006187..1077802
location: region:1006187-1077802:1
so has part: feature:1006187-1077802:1:exon
subclass of: SO_0000010

118884354
type: Gene
SIO_000068: ncbigene

position:1006187:1
position: 1006187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077802:1
position: 1077802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1006187-1077802:1:exon

IFT88
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: IFT88
product: intraflagellar transport 88
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036831982.1
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(1006187..1006298,1009941..1010036,1013438..1013500,1019219..1019275,1020402..1020455,1021062..1021125,1021795..1021864,1024953..1025043,1026216..1026320,1028304..1028406,1029483..1029597,1031457..1031688,1032988..1033058,1040615..1040701,1045919..1046018,1050266..1050353,1052261..1052447,1053753..1053861,1055630..1055780,1056275..1056390,1058119..1058171,1059874..1059939,1063309..1063415,1072518..1072584,1076956..1077066,1077262..1077802)
location: region:1006187-1077802:1
so has part: feature:1006187-1006298:1:exon
so has part: feature:1009941-1010036:1:exon
so has part: feature:1013438-1013500:1:exon
so has part: feature:1019219-1019275:1:exon
so has part: feature:1020402-1020455:1:exon
so has part: feature:1021062-1021125:1:exon
so has part: feature:1021795-1021864:1:exon
so has part: feature:1024953-1025043:1:exon
so has part: feature:1026216-1026320:1:exon
so has part: feature:1028304-1028406:1:exon
so has part: feature:1029483-1029597:1:exon
so has part: feature:1031457-1031688:1:exon
so has part: feature:1032988-1033058:1:exon
so has part: feature:1040615-1040701:1:exon
so has part: feature:1045919-1046018:1:exon
so has part: feature:1050266-1050353:1:exon
so has part: feature:1052261-1052447:1:exon
so has part: feature:1053753-1053861:1:exon
so has part: feature:1055630-1055780:1:exon
so has part: feature:1056275-1056390:1:exon
so has part: feature:1058119-1058171:1:exon
so has part: feature:1059874-1059939:1:exon
so has part: feature:1063309-1063415:1:exon
so has part: feature:1072518-1072584:1:exon
so has part: feature:1076956-1077066:1:exon
so has part: feature:1077262-1077802:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1006187-1006298:1:exon

position:1006298:1
position: 1006298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1009941-1010036:1:exon

position:1009941:1
position: 1009941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010036:1
position: 1010036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1013438-1013500:1:exon

position:1013438:1
position: 1013438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013500:1
position: 1013500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1019219-1019275:1:exon

position:1019219:1
position: 1019219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019275:1
position: 1019275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1020402-1020455:1:exon

position:1020402:1
position: 1020402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1020455:1
position: 1020455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1021062-1021125:1:exon

position:1021062:1
position: 1021062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021125:1
position: 1021125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1021795-1021864:1:exon

position:1021795:1
position: 1021795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1021864:1
position: 1021864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1024953-1025043:1:exon

position:1024953:1
position: 1024953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1025043:1
position: 1025043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1026216-1026320:1:exon

position:1026216:1
position: 1026216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026320:1
position: 1026320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1028304-1028406:1:exon

position:1028304:1
position: 1028304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1028406:1
position: 1028406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1029483-1029597:1:exon

position:1029483:1
position: 1029483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029597:1
position: 1029597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1031457-1031688:1:exon

position:1031457:1
position: 1031457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031688:1
position: 1031688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1032988-1033058:1:exon

position:1032988:1
position: 1032988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033058:1
position: 1033058
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1040615-1040701:1:exon

position:1040615:1
position: 1040615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1040701:1
position: 1040701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1045919-1046018:1:exon

position:1045919:1
position: 1045919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1046018:1
position: 1046018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1050266-1050353:1:exon

position:1050266:1
position: 1050266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1050353:1
position: 1050353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1052261-1052447:1:exon

position:1052261:1
position: 1052261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1052447:1
position: 1052447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1053753-1053861:1:exon

position:1053753:1
position: 1053753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053861:1
position: 1053861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1055630-1055780:1:exon

position:1055630:1
position: 1055630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1055780:1
position: 1055780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1056275-1056390:1:exon

position:1056275:1
position: 1056275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1056390:1
position: 1056390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1058119-1058171:1:exon

position:1058119:1
position: 1058119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058171:1
position: 1058171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1059874-1059939:1:exon

position:1059874:1
position: 1059874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1059939:1
position: 1059939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1063309-1063415:1:exon

position:1063309:1
position: 1063309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063415:1
position: 1063415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1072518-1072584:1:exon

position:1072518:1
position: 1072518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1072584:1
position: 1072584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1076956-1077066:1:exon

position:1076956:1
position: 1076956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077066:1
position: 1077066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1077262-1077802:1:exon

position:1077262:1
position: 1077262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IFT88
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: IFT88
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: intraflagellar transport protein 88 homolog
translation: MMQNVHLAPETDEDDLYSGYNDYNPTYDTEELENDTAFQQAVKTSHGRRPPITAKIPSTAVARPVATGCGSKTSLASSMGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSRGPAPPLEARNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVRQREQVTSPENINLDLTYSVLFNLASQYSANEMYPEALNTYQVIVKNKMFSNAGRLKVNMGNIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGVTFIKTGQYSDAINSFEHIMSMAPNLKAGFNLILSYFAVGDREKMKKAFQKLIAVPLETDEDGKYISPNDDPHTNLVIEAIKNDHLRQMERERKAMAEKYIMTAAKLIAPVIETSFAVGYDWCVEVVKASQYVELANDLEINKAITYLRQKDFNQAVETLKMLKKKDSSVKSAAATNLSFLYYLENEFAQASSYADLAVNSDRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALDCFLKLHAILRNSAQVLYQIANIYELMEDPNQAMEWLMQLISVVPTDSRALSKLGGLYDSEGDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLMVASCFRRSGNYQKALDTYKDIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKMKEIREQRTKSGRDGSGGPRGRRDGSAGSDGGQNCSAGSRGERLSAQLRALSRTEEPYDSSSNKELDASYVDPLGPQIERPRTAAKKRVDEDDFADEELGDDLLPE
SIO_010081: IFT88
subclass of: SO_0000673
so part of: IFT88
location: join(1009947..1010036,1013438..1013500,1019219..1019275,1020402..1020455,1021062..1021125,1021795..1021864,1024953..1025043,1026216..1026320,1028304..1028406,1029483..1029597,1031457..1031688,1032988..1033058,1040615..1040701,1045919..1046018,1050266..1050353,1052261..1052447,1053753..1053861,1055630..1055780,1056275..1056390,1058119..1058171,1059874..1059939,1063309..1063415,1072518..1072584,1076956..1077066,1077262..1077383)
location: region:1009947-1077383:1
so has part: feature:1009947-1010036:1:exon
so has part: feature:1013438-1013500:1:exon
so has part: feature:1019219-1019275:1:exon
so has part: feature:1020402-1020455:1:exon
so has part: feature:1021062-1021125:1:exon
so has part: feature:1021795-1021864:1:exon
so has part: feature:1024953-1025043:1:exon
so has part: feature:1026216-1026320:1:exon
so has part: feature:1028304-1028406:1:exon
so has part: feature:1029483-1029597:1:exon
so has part: feature:1031457-1031688:1:exon
so has part: feature:1032988-1033058:1:exon
so has part: feature:1040615-1040701:1:exon
so has part: feature:1045919-1046018:1:exon
so has part: feature:1050266-1050353:1:exon
so has part: feature:1052261-1052447:1:exon
so has part: feature:1053753-1053861:1:exon
so has part: feature:1055630-1055780:1:exon
so has part: feature:1056275-1056390:1:exon
so has part: feature:1058119-1058171:1:exon
so has part: feature:1059874-1059939:1:exon
so has part: feature:1063309-1063415:1:exon
so has part: feature:1072518-1072584:1:exon
so has part: feature:1076956-1077066:1:exon
so has part: feature:1077262-1077383:1:exon

XP_036687877.1
type: Protein
SIO_000068: ncbiprotein

position:1009947:1
position: 1009947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1077383:1
position: 1077383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009947-1010036:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1013438-1013500:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1019219-1019275:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1020402-1020455:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1021062-1021125:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1021795-1021864:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1024953-1025043:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1026216-1026320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1028304-1028406:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1029483-1029597:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1031457-1031688:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1032988-1033058:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1040615-1040701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1045919-1046018:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1050266-1050353:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1052261-1052447:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1053753-1053861:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1055630-1055780:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1056275-1056390:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1058119-1058171:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1059874-1059939:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1063309-1063415:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1072518-1072584:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1076956-1077066:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1077262-1077383:1:exon

IL17D
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1077960..1105511
location: region:1077960-1105511:1
so has part: feature:1077960-1105511:1:exon
subclass of: SO_0000010

118884351
type: Gene
SIO_000068: ncbigene

position:1077960:1
position: 1077960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1105511:1
position: 1105511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1077960-1105511:1:exon

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: IL17D
product: interleukin 17D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831975.1
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1077960..1078048,1079508..1079652,1080793..1081260,1081731..1082026,1103878..1105511)
location: region:1077960-1105511:1
so has part: feature:1077960-1078048:1:exon
so has part: feature:1079508-1079652:1:exon
so has part: feature:1080793-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1103878-1105511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1077960-1078048:1:exon

position:1078048:1
position: 1078048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1079508-1079652:1:exon

position:1079508:1
position: 1079508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1079652:1
position: 1079652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1080793-1081260:1:exon

position:1080793:1
position: 1080793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1081260:1
position: 1081260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1081731-1082026:1:exon

position:1081731:1
position: 1081731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082026:1
position: 1082026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1103878-1105511:1:exon

position:1103878:1
position: 1103878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: IL17D
product: interleukin 17D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831976.1
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1079501..1079652,1080793..1081260,1081731..1082026,1103878..1105511)
location: region:1079501-1105511:1
so has part: feature:1079501-1079652:1:exon
so has part: feature:1080793-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1103878-1105511:1:exon

position:1079501:1
position: 1079501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1079501-1079652:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1080793-1081260:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1081731-1082026:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103878-1105511:1:exon

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D isoform X1
translation: MPSSSHKSASWVEWCLDFGGARGAERDRFLVSGGRRSAPAPRSERSPSPVPQRKSWRRSCFQAPRAPLRVPFPLPRRLRPGGSSRRPDPANFPSSRGASFRSAPRGSARDVSAPPRPPEPLRGDAGATGLGAGGRRPAGAVAGPGGGRPEGGPAAGAGAGLRGPARGAPGAAVRAAGGRRARRLPPHAAAGPARAGAQRQLPGRGQARRPPLPAAHQPAQRVALGLQRRPAAARLQGPSSPCRISYDPGRFPRYLPEAYCLCRGCLTGPRGEEDVRLRSAPVLVPAVVLRRTPACAGGRAVYTEEYLTIPVGCTCMPGPDKDADGANSSLDKPARP
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1080876..1081260,1081731..1082026,1103878..1104207)
location: region:1080876-1104207:1
so has part: feature:1080876-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1103878-1104207:1:exon

XP_036687870.1
type: Protein
SIO_000068: ncbiprotein

position:1080876:1
position: 1080876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1104207:1
position: 1104207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1080876-1081260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081731-1082026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103878-1104207:1:exon

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D isoform X1
translation: MPSSSHKSASWVEWCLDFGGARGAERDRFLVSGGRRSAPAPRSERSPSPVPQRKSWRRSCFQAPRAPLRVPFPLPRRLRPGGSSRRPDPANFPSSRGASFRSAPRGSARDVSAPPRPPEPLRGDAGATGLGAGGRRPAGAVAGPGGGRPEGGPAAGAGAGLRGPARGAPGAAVRAAGGRRARRLPPHAAAGPARAGAQRQLPGRGQARRPPLPAAHQPAQRVALGLQRRPAAARLQGPSSPCRISYDPGRFPRYLPEAYCLCRGCLTGPRGEEDVRLRSAPVLVPAVVLRRTPACAGGRAVYTEEYLTIPVGCTCMPGPDKDADGANSSLDKPARP
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1080876..1081260,1081731..1082026,1103878..1104207)
location: region:1080876-1104207:1
so has part: feature:1080876-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1103878-1104207:1:exon

XP_036687871.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1080876-1081260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081731-1082026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103878-1104207:1:exon

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: IL17D
product: interleukin 17D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831977.1
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1081134..1081260,1081731..1082026,1082156..1082188,1103925..1105511)
location: region:1081134-1105511:1
so has part: feature:1081134-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1082156-1082188:1:exon
so has part: feature:1103925-1105511:1:exon

position:1081134:1
position: 1081134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081134-1081260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081731-1082026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082156-1082188:1:exon

position:1082156:1
position: 1082156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082188:1
position: 1082188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1103925-1105511:1:exon

position:1103925:1
position: 1103925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL17D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: IL17D
product: interleukin 17D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036831978.1
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1081134..1081260,1081731..1082026,1103925..1105511)
location: region:1081134-1105511:1
so has part: feature:1081134-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1103925-1105511:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1081134-1081260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081731-1082026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103925-1105511:1:exon

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D isoform X2
translation: MLGPPVWALVAGVLLALSPGRAGGAPRAGRRPARARGCADRPEELLEQLYGRLAAGVLGAFHHTLQLGPREQARNASCPAGGRPADRRFRPPTNLRSVSPWAYRRPFLEHLRLARISYDPGRFPRYLPEAYCLCRGCLTGPRGEEDVRLRSAPVLVPAVVLRRTPACAGGRAVYTEEYLTIPVGCTCMPGPDKDADGANSSLDKPARP
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1081246..1081260,1081731..1082026,1082156..1082188,1103925..1104207)
location: region:1081246-1104207:1
so has part: feature:1081246-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1082156-1082188:1:exon
so has part: feature:1103925-1104207:1:exon

XP_036687872.1
type: Protein
SIO_000068: ncbiprotein

position:1081246:1
position: 1081246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081246-1081260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081731-1082026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1082156-1082188:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1103925-1104207:1:exon

IL17D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: IL17D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-17D isoform X3
translation: MLGPPVWALVAGVLLALSPGRAGGAPRAGRRPARARGCADRPEELLEQLYGRLAAGVLGAFHHTLQLGPREQARNASCPAGGRPADRRFRPPTNLRSVSPWAYRISYDPGRFPRYLPEAYCLCRGCLTGPRGEEDVRLRSAPVLVPAVVLRRTPACAGGRAVYTEEYLTIPVGCTCMPGPDKDADGANSSLDKPARP
SIO_010081: IL17D
subclass of: SO_0000673
so part of: IL17D
location: join(1081246..1081260,1081731..1082026,1103925..1104207)
location: region:1081246-1104207:1
so has part: feature:1081246-1081260:1:exon
so has part: feature:1081731-1082026:1:exon
so has part: feature:1103925-1104207:1:exon

XP_036687873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1081246-1081260:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1081731-1082026:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1103925-1104207:1:exon

EEF1AKMT1
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1104856..1127899)
location: region:1104856-1127899:-1
so has part: feature:1104856-1127899:-1:exon
subclass of: SO_0000010

118884352
type: Gene
SIO_000068: ncbigene

position:1104856:-1
position: 1104856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1127899:-1
position: 1127899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1104856-1127899:-1:exon

EEF1AKMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: EEF1AKMT1
product: EEF1A lysine methyltransferase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036831980.1
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(1104856..1106457,1107401..1107681,1112345..1112424,1114274..1114424,1127822..1127899))
location: region:1104856-1127899:-1
so has part: feature:1127822-1127899:-1:exon
so has part: feature:1114274-1114424:-1:exon
so has part: feature:1112345-1112424:-1:exon
so has part: feature:1107401-1107681:-1:exon
so has part: feature:1104856-1106457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1127822-1127899:-1:exon

position:1127822:-1
position: 1127822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1114274-1114424:-1:exon

position:1114274:-1
position: 1114274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114424:-1
position: 1114424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1112345-1112424:-1:exon

position:1112345:-1
position: 1112345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1112424:-1
position: 1112424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1107401-1107681:-1:exon

position:1107401:-1
position: 1107401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1107681:-1
position: 1107681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1104856-1106457:-1:exon

position:1106457:-1
position: 1106457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EEF1AKMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: EEF1AKMT1
product: EEF1A lysine methyltransferase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036831981.1
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(1104856..1107681,1112345..1112424,1114274..1114424,1127822..1127899))
location: region:1104856-1127899:-1
so has part: feature:1127822-1127899:-1:exon
so has part: feature:1114274-1114424:-1:exon
so has part: feature:1112345-1112424:-1:exon
so has part: feature:1104856-1107681:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1127822-1127899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1114274-1114424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112345-1112424:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1104856-1107681:-1:exon

EEF1AKMT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: EEF1AKMT1
product: EEF1A lysine methyltransferase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036831979.1
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(1104856..1106457,1107401..1107681,1112345..1112427,1114274..1114424,1127822..1127899))
location: region:1104856-1127899:-1
so has part: feature:1127822-1127899:-1:exon
so has part: feature:1114274-1114424:-1:exon
so has part: feature:1112345-1112427:-1:exon
so has part: feature:1107401-1107681:-1:exon
so has part: feature:1104856-1106457:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1127822-1127899:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1114274-1114424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1112345-1112427:-1:exon

position:1112427:-1
position: 1112427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1107401-1107681:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1104856-1106457:-1:exon

EEF1AKMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1 isoform X2
translation: MSNSEDEDLPQLSSHALAALQEFYAEQKQYTDLGGDDKYNIGIIEENWLSQFWYTPETALRLAEEAVAAAGEGGRIACVSAPSVYQKLRELHREDFSVCIFEYDHRFAIYGEEFIFYDYNNPVDLPEKIAAHSFDIVIADPPYLSEECLRKTSETIKYLTRGKILLCTGAVMEEEAAKLLGVKMCKFIPKHTRTLGNEFRCYVNYDSGLDCEL
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(1106321..1106457,1107401..1107681,1112345..1112424,1114274..1114417))
location: region:1106321-1114417:-1
so has part: feature:1114274-1114417:-1:exon
so has part: feature:1112345-1112424:-1:exon
so has part: feature:1107401-1107681:-1:exon
so has part: feature:1106321-1106457:-1:exon

XP_036687875.1
type: Protein
SIO_000068: ncbiprotein

position:1106321:-1
position: 1106321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1114417:-1
position: 1114417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114274-1114417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112345-1112424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107401-1107681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106321-1106457:-1:exon

EEF1AKMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1 isoform X1
translation: MSNSEDEDLPQLSSHALAALQEFYAEQKQYTDLGGDDKYNIGIIEENWQLSQFWYTPETALRLAEEAVAAAGEGGRIACVSAPSVYQKLRELHREDFSVCIFEYDHRFAIYGEEFIFYDYNNPVDLPEKIAAHSFDIVIADPPYLSEECLRKTSETIKYLTRGKILLCTGAVMEEEAAKLLGVKMCKFIPKHTRTLGNEFRCYVNYDSGLDCEL
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(1106321..1106457,1107401..1107681,1112345..1112427,1114274..1114417))
location: region:1106321-1114417:-1
so has part: feature:1114274-1114417:-1:exon
so has part: feature:1112345-1112427:-1:exon
so has part: feature:1107401-1107681:-1:exon
so has part: feature:1106321-1106457:-1:exon

XP_036687874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1114274-1114417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112345-1112427:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107401-1107681:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1106321-1106457:-1:exon

EEF1AKMT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: EEF1AKMT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EEF1A lysine methyltransferase 1 isoform X3
translation: MSNSEDEDLPQLSSHALAALQEFYAEQKQYTDLGGDDKYNIGIIEENWLSQFWYTPETALRLAEEAVAAAGEGGRIACVSAPSVYQKLRELHREDFSVCIFEYDHRFAIYGEEFIFYDYNNPVDLPEKIAAHSFDIVIADPPYLSEECLRKTSETIKYLTRGKILLCTGRCRIGNTPPVTLNKALPRSAPQSPICTVGLRCCLPLRAGEK
SIO_010081: EEF1AKMT1
subclass of: SO_0000673
so part of: EEF1AKMT1
location: complement(join(1107273..1107681,1112345..1112424,1114274..1114417))
location: region:1107273-1114417:-1
so has part: feature:1114274-1114417:-1:exon
so has part: feature:1112345-1112424:-1:exon
so has part: feature:1107273-1107681:-1:exon

XP_036687876.1
type: Protein
SIO_000068: ncbiprotein

position:1107273:-1
position: 1107273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1114274-1114417:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1112345-1112424:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1107273-1107681:-1:exon

XPO4
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1131532..1243878)
location: region:1131532-1243878:-1
so has part: feature:1131532-1243878:-1:exon
subclass of: SO_0000010

118883937
type: Gene
SIO_000068: ncbigene

position:1131532:-1
position: 1131532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1243878:-1
position: 1243878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1131532-1243878:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: XPO4
product: exportin 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831073.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1131532..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1187356..1187468,1202529..1202682,1203390..1203506,1213298..1213436,1217401..1217542,1222756..1222861,1241839..1242417,1242534..1243878))
location: region:1131532-1243878:-1
so has part: feature:1242534-1243878:-1:exon
so has part: feature:1241839-1242417:-1:exon
so has part: feature:1222756-1222861:-1:exon
so has part: feature:1217401-1217542:-1:exon
so has part: feature:1213298-1213436:-1:exon
so has part: feature:1203390-1203506:-1:exon
so has part: feature:1202529-1202682:-1:exon
so has part: feature:1187356-1187468:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1131532-1136888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1242534-1243878:-1:exon

position:1242534:-1
position: 1242534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1241839-1242417:-1:exon

position:1241839:-1
position: 1241839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1242417:-1
position: 1242417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1222756-1222861:-1:exon

position:1222756:-1
position: 1222756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222861:-1
position: 1222861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1217401-1217542:-1:exon

position:1217401:-1
position: 1217401
reference: sequence
type: ReverseStrandPosition
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position:1217542:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:1213298-1213436:-1:exon

position:1213298:-1
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reference: sequence
type: ReverseStrandPosition
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position:1213436:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:1203390-1203506:-1:exon

position:1203390:-1
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reference: sequence
type: ReverseStrandPosition
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position:1203506:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:1202529-1202682:-1:exon

position:1202529:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202682:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:1187356-1187468:-1:exon

position:1187356:-1
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reference: sequence
type: ReverseStrandPosition
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position:1187468:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:1182903-1183060:-1:exon

position:1182903:-1
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reference: sequence
type: ReverseStrandPosition
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position:1183060:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:1182498-1182672:-1:exon

position:1182498:-1
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reference: sequence
type: ReverseStrandPosition
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position:1182672:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 11
SIO_000628: feature:1156543-1156719:-1:exon

position:1156543:-1
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reference: sequence
type: ReverseStrandPosition
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position:1156719:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:1155947-1156089:-1:exon

position:1155947:-1
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reference: sequence
type: ReverseStrandPosition
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position:1156089:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:1155298-1155443:-1:exon

position:1155298:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1155443:-1
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reference: sequence
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urn:…
SIO_000300: 14
SIO_000628: feature:1154261-1154438:-1:exon

position:1154261:-1
position: 1154261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1154438:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:1150901-1151060:-1:exon

position:1150901:-1
position: 1150901
reference: sequence
type: ReverseStrandPosition
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position:1151060:-1
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:1150201-1150370:-1:exon

position:1150201:-1
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reference: sequence
type: ReverseStrandPosition
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position:1150370:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:1149227-1149401:-1:exon

position:1149227:-1
position: 1149227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1149401:-1
position: 1149401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1146247-1146540:-1:exon

position:1146247:-1
position: 1146247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1146540:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1145146-1145329:-1:exon

position:1145146:-1
position: 1145146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1145329:-1
position: 1145329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1141871-1141989:-1:exon

position:1141871:-1
position: 1141871
reference: sequence
type: ReverseStrandPosition
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position:1141989:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:1140351-1140481:-1:exon

position:1140351:-1
position: 1140351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1140481:-1
position: 1140481
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 22
SIO_000628: feature:1139723-1139840:-1:exon

position:1139723:-1
position: 1139723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139840:-1
position: 1139840
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:1139229-1139321:-1:exon

position:1139229:-1
position: 1139229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1139321:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1131532-1136888:-1:exon

position:1136888:-1
position: 1136888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: XPO4
product: exportin 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831075.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1131532..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1213298..1213436,1217401..1217542,1222756..1222861,1241839..1243878))
location: region:1131532-1243878:-1
so has part: feature:1241839-1243878:-1:exon
so has part: feature:1222756-1222861:-1:exon
so has part: feature:1217401-1217542:-1:exon
so has part: feature:1213298-1213436:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1131532-1136888:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1241839-1243878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222756-1222861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217401-1217542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213298-1213436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182903-1183060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182498-1182672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156543-1156719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1155947-1156089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1155298-1155443:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1154261-1154438:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1150901-1151060:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1150201-1150370:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1149227-1149401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1146247-1146540:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1145146-1145329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1141871-1141989:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1140351-1140481:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1139723-1139840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1139229-1139321:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1131532-1136888:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: XPO4
product: exportin 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036831074.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1131532..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1187356..1187468,1202529..1202682,1203390..1203506,1213298..1213436,1217401..1217542,1217650..1217804,1222756..1222862))
location: region:1131532-1222862:-1
so has part: feature:1222756-1222862:-1:exon
so has part: feature:1217650-1217804:-1:exon
so has part: feature:1217401-1217542:-1:exon
so has part: feature:1213298-1213436:-1:exon
so has part: feature:1203390-1203506:-1:exon
so has part: feature:1202529-1202682:-1:exon
so has part: feature:1187356-1187468:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1131532-1136888:-1:exon

position:1222862:-1
position: 1222862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222756-1222862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1217650-1217804:-1:exon

position:1217650:-1
position: 1217650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217804:-1
position: 1217804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1217401-1217542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213298-1213436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1203390-1203506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202529-1202682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187356-1187468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182903-1183060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182498-1182672:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1156543-1156719:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1155947-1156089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1155298-1155443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1154261-1154438:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1150901-1151060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1150201-1150370:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149227-1149401:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1146247-1146540:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1145146-1145329:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1141871-1141989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1140351-1140481:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1139723-1139840:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1139229-1139321:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1131532-1136888:-1:exon

XPO4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: XPO4
product: exportin 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036831076.1
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1131532..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1187356..1187468,1202529..1202682,1203390..1203506,1217401..1217517))
location: region:1131532-1217517:-1
so has part: feature:1217401-1217517:-1:exon
so has part: feature:1203390-1203506:-1:exon
so has part: feature:1202529-1202682:-1:exon
so has part: feature:1187356-1187468:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1131532-1136888:-1:exon

position:1217517:-1
position: 1217517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217401-1217517:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1203390-1203506:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1202529-1202682:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1187356-1187468:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182903-1183060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182498-1182672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156543-1156719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1155947-1156089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1155298-1155443:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1154261-1154438:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1150901-1151060:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1150201-1150370:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1149227-1149401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1146247-1146540:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1145146-1145329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1141871-1141989:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1140351-1140481:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1139723-1139840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1139229-1139321:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1131532-1136888:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X3
translation: MMAAALGPPEVIAQLENAAKVLMAPPSMVNTEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAVMEAVVREWILLERGSVESLRTFLLTYVLQRPHLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVVHRKIREDSDMAQDSLQCLAQLASLHGPVFPDEGSQVDYLAHFIEGLLNTINGIEIEDSEAVGISSIVSNLITVFPRNVLTAIPRELFSSFVSCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDRLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRRQQHLLASPASGSVDGKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAVLRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISVPFSTAFGADTEGSQWIVGYLLQKVLSNLSVCSSEQDLANDTVQLLVTLVERRERANLVIQCESWWNLAKQFASRRPPLNFLSSPVQRTLMKALVLGGFAHMDAETKQQYWTEVLQPLQQRFLRVINQENFPQMCQQEEVKQEITATLEALCGIAEATQVDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMNLYEACLTLLRVYSKNNVGRQRVDVTVEEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGQEPGPAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSPEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNAEMTAAAGEALYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPVLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1136691..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1213298..1213436,1217401..1217542,1222756..1222861,1241839..1241907))
location: region:1136691-1241907:-1
so has part: feature:1241839-1241907:-1:exon
so has part: feature:1222756-1222861:-1:exon
so has part: feature:1217401-1217542:-1:exon
so has part: feature:1213298-1213436:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1136691-1136888:-1:exon

XP_036686970.1
type: Protein
SIO_000068: ncbiprotein

position:1136691:-1
position: 1136691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1241907:-1
position: 1241907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1241839-1241907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222756-1222861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217401-1217542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213298-1213436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182903-1183060:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182498-1182672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1156543-1156719:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1155947-1156089:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1155298-1155443:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1154261-1154438:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1150901-1151060:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1150201-1150370:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1149227-1149401:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1146247-1146540:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1145146-1145329:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1141871-1141989:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1140351-1140481:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1139723-1139840:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1139229-1139321:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1136691-1136888:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X1
translation: MMAAALGPPEVIAQLENAAKVLMAPPSMVNTEQRQHAEHIFLSFRKSKSPFAVCKHILETSKVDYVLFQAATAVMEAVVREWILLERGSVESLRTFLLTYVLQRPHLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIFLLTVEVLQEFSRREHLSAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNVLLKPTESWREALLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPVFPDEGSQVDYLAHFIEGLLNTINGIEIEDSEAVGISSIVSNLITVFPRNVLTAIPRELFSSFVSCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDRLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRRQQHLLASPASGSVDGKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAVLRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISVPFSTAFGADTEGSQWIVGYLLQKVLSNLSVCSSEQDLANDTVQLLVTLVERRERANLVIQCESWWNLAKQFASRRPPLNFLSSPVQRTLMKALVLGGFAHMDAETKQQYWTEVLQPLQQRFLRVINQENFPQMCQQEEVKQEITATLEALCGIAEATQVDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMNLYEACLTLLRVYSKNNVGRQRVDVTVEEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGQEPGPAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSPEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNAEMTAAAGEALYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPVLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1136691..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1187356..1187468,1202529..1202682,1203390..1203506,1213298..1213436,1217401..1217542,1222756..1222861,1241839..1241907))
location: region:1136691-1241907:-1
so has part: feature:1241839-1241907:-1:exon
so has part: feature:1222756-1222861:-1:exon
so has part: feature:1217401-1217542:-1:exon
so has part: feature:1213298-1213436:-1:exon
so has part: feature:1203390-1203506:-1:exon
so has part: feature:1202529-1202682:-1:exon
so has part: feature:1187356-1187468:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1136691-1136888:-1:exon

XP_036686968.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1241839-1241907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222756-1222861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1217401-1217542:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1213298-1213436:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1203390-1203506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1202529-1202682:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1187356-1187468:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1182903-1183060:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1182498-1182672:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1156543-1156719:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1155947-1156089:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1155298-1155443:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1154261-1154438:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1150901-1151060:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1150201-1150370:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1149227-1149401:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1146247-1146540:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1145146-1145329:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1141871-1141989:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1140351-1140481:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1139723-1139840:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1139229-1139321:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1136691-1136888:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X2
translation: MEAVVREWILLERGSVESLRTFLLTYVLQRPHLQKYVREQILLAVAVIVKRGSLDKSIDCKSIFHEVSQLISSGNPTVQTLACSILTALLSEFSSSSKTSNIGLSMEFHGNCKRVFQEEDLRQIFLLTVEVLQEFSRREHLSAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNVLLKPTESWREALLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPVFPDEGSQVDYLAHFIEGLLNTINGIEIEDSEAVGISSIVSNLITVFPRNVLTAIPRELFSSFVSCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDRLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRRQQHLLASPASGSVDGKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAVLRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISVPFSTAFGADTEGSQWIVGYLLQKVLSNLSVCSSEQDLANDTVQLLVTLVERRERANLVIQCESWWNLAKQFASRRPPLNFLSSPVQRTLMKALVLGGFAHMDAETKQQYWTEVLQPLQQRFLRVINQENFPQMCQQEEVKQEITATLEALCGIAEATQVDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMNLYEACLTLLRVYSKNNVGRQRVDVTVEEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGQEPGPAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSPEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNAEMTAAAGEALYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPVLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1136691..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1187356..1187468,1202529..1202682,1203390..1203506,1213298..1213436,1217401..1217495))
location: region:1136691-1217495:-1
so has part: feature:1217401-1217495:-1:exon
so has part: feature:1213298-1213436:-1:exon
so has part: feature:1203390-1203506:-1:exon
so has part: feature:1202529-1202682:-1:exon
so has part: feature:1187356-1187468:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1136691-1136888:-1:exon

XP_036686969.1
type: Protein
SIO_000068: ncbiprotein

position:1217495:-1
position: 1217495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1217401-1217495:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1213298-1213436:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1203390-1203506:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202529-1202682:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1187356-1187468:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1182903-1183060:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1182498-1182672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1156543-1156719:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1155947-1156089:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1155298-1155443:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1154261-1154438:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1150901-1151060:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1150201-1150370:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1149227-1149401:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1146247-1146540:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1145146-1145329:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1141871-1141989:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1140351-1140481:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1139723-1139840:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1139229-1139321:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1136691-1136888:-1:exon

XPO4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: XPO4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: exportin-4 isoform X4
translation: MEFHGNCKRVFQEEDLRQIFLLTVEVLQEFSRREHLSAQMSSVFQRYLALANQVLSWNFLPPNLGRHYIAMFESSQNVLLKPTESWREALLDSRVMELFFTVHRKIREDSDMAQDSLQCLAQLASLHGPVFPDEGSQVDYLAHFIEGLLNTINGIEIEDSEAVGISSIVSNLITVFPRNVLTAIPRELFSSFVSCLTHLTCSFGRSAALEEVLDKDDMVYMEAYDRLLESWLTLVQDDKHFHKGFFTQHAVQVFNSYIQCHLAAPDGTRNLTANGVASREEEEISELQEDDRDQFSDQLASVGMLGRIAAEHCIPLLTSLLEERVTRLHGQLQRRQQHLLASPASGSVDGKVLDDLYEDIHWLILVTGYLLADDTQGETPLIPPEIMEYSIKHSSEVDINTTLQILGSPGEKASSIPGCNRTDSVIRLLSAVLRVSEVESRAIRADLTHLLSPQMGKDIVWFLKRWAKTYLLVDEKLYDQISVPFSTAFGADTEGSQWIVGYLLQKVLSNLSVCSSEQDLANDTVQLLVTLVERRERANLVIQCESWWNLAKQFASRRPPLNFLSSPVQRTLMKALVLGGFAHMDAETKQQYWTEVLQPLQQRFLRVINQENFPQMCQQEEVKQEITATLEALCGIAEATQVDNVAILFNFLMDFLTNCIGLMEVYKNTPETVNLIIEVFVEVAHKQICYLGESKAMNLYEACLTLLRVYSKNNVGRQRVDVTVEEEEQYQDLLLIMELLTNLLSKEFIDFSDTDEVFRGQEPGPAANRSVSAADVVLYGVNLILPLMSQDLLKFPTLCNQYYKLITFICEIFPEKIPQLPEDLFKSLMYSLELGMTSMSPEVCQLCLEALTPLAEQCAKAQETDSPLFLATRHFLKLVFDMLVLQKHNAEMTAAAGEALYTLVCLHQAEYSELVETLLSSQQDPVIYQRLADAFNKLTASSTPPVLDRKQKMAFLKSLEEFMANVGGLLCVK
SIO_010081: XPO4
subclass of: SO_0000673
so part of: XPO4
location: complement(join(1136691..1136888,1139229..1139321,1139723..1139840,1140351..1140481,1141871..1141989,1145146..1145329,1146247..1146540,1149227..1149401,1150201..1150370,1150901..1151060,1154261..1154438,1155298..1155443,1155947..1156089,1156543..1156719,1182498..1182672,1182903..1183060,1187356..1187468,1202529..1202682,1203390..1203425))
location: region:1136691-1203425:-1
so has part: feature:1203390-1203425:-1:exon
so has part: feature:1202529-1202682:-1:exon
so has part: feature:1187356-1187468:-1:exon
so has part: feature:1182903-1183060:-1:exon
so has part: feature:1182498-1182672:-1:exon
so has part: feature:1156543-1156719:-1:exon
so has part: feature:1155947-1156089:-1:exon
so has part: feature:1155298-1155443:-1:exon
so has part: feature:1154261-1154438:-1:exon
so has part: feature:1150901-1151060:-1:exon
so has part: feature:1150201-1150370:-1:exon
so has part: feature:1149227-1149401:-1:exon
so has part: feature:1146247-1146540:-1:exon
so has part: feature:1145146-1145329:-1:exon
so has part: feature:1141871-1141989:-1:exon
so has part: feature:1140351-1140481:-1:exon
so has part: feature:1139723-1139840:-1:exon
so has part: feature:1139229-1139321:-1:exon
so has part: feature:1136691-1136888:-1:exon

XP_036686971.1
type: Protein
SIO_000068: ncbiprotein

position:1203425:-1
position: 1203425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203390-1203425:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202529-1202682:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1187356-1187468:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1182903-1183060:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1182498-1182672:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1156543-1156719:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1155947-1156089:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1155298-1155443:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1154261-1154438:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1150901-1151060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1150201-1150370:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1149227-1149401:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1146247-1146540:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1145146-1145329:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1141871-1141989:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1140351-1140481:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1139723-1139840:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1139229-1139321:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1136691-1136888:-1:exon

LATS2
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1267653..1320021)
location: region:1267653-1320021:-1
so has part: feature:1267653-1320021:-1:exon
subclass of: SO_0000010

118884177
type: Gene
SIO_000068: ncbigene

position:1267653:-1
position: 1267653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320021:-1
position: 1320021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1267653-1320021:-1:exon

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LATS2
product: large tumor suppressor kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831628.1
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(1267653..1269828,1273054..1273160,1274806..1274988,1275945..1276527,1277425..1278704,1279707..1279839,1305302..1305848,1320003..1320021))
location: region:1267653-1320021:-1
so has part: feature:1320003-1320021:-1:exon
so has part: feature:1305302-1305848:-1:exon
so has part: feature:1279707-1279839:-1:exon
so has part: feature:1277425-1278704:-1:exon
so has part: feature:1275945-1276527:-1:exon
so has part: feature:1274806-1274988:-1:exon
so has part: feature:1273054-1273160:-1:exon
so has part: feature:1267653-1269828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1320003-1320021:-1:exon

position:1320003:-1
position: 1320003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305302-1305848:-1:exon

position:1305302:-1
position: 1305302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305848:-1
position: 1305848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1279707-1279839:-1:exon

position:1279707:-1
position: 1279707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1279839:-1
position: 1279839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1277425-1278704:-1:exon

position:1277425:-1
position: 1277425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1278704:-1
position: 1278704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1275945-1276527:-1:exon

position:1275945:-1
position: 1275945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1276527:-1
position: 1276527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1274806-1274988:-1:exon

position:1274806:-1
position: 1274806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1274988:-1
position: 1274988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1273054-1273160:-1:exon

position:1273054:-1
position: 1273054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1273160:-1
position: 1273160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1267653-1269828:-1:exon

position:1269828:-1
position: 1269828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LATS2
product: large tumor suppressor kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036831626.1
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(1267653..1269828,1273054..1273160,1274806..1274988,1275945..1276527,1277425..1278704,1279707..1279839,1305302..1305848,1315261..1315507))
location: region:1267653-1315507:-1
so has part: feature:1315261-1315507:-1:exon
so has part: feature:1305302-1305848:-1:exon
so has part: feature:1279707-1279839:-1:exon
so has part: feature:1277425-1278704:-1:exon
so has part: feature:1275945-1276527:-1:exon
so has part: feature:1274806-1274988:-1:exon
so has part: feature:1273054-1273160:-1:exon
so has part: feature:1267653-1269828:-1:exon

position:1315507:-1
position: 1315507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1315261-1315507:-1:exon

position:1315261:-1
position: 1315261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305302-1305848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279707-1279839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277425-1278704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275945-1276527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1274806-1274988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273054-1273160:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267653-1269828:-1:exon

LATS2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LATS2
product: large tumor suppressor kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_036831627.1
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(1267653..1269828,1273054..1273160,1274806..1274988,1275945..1276527,1277425..1278704,1279707..1279839,1305302..1305848,1314824..1315243))
location: region:1267653-1315243:-1
so has part: feature:1314824-1315243:-1:exon
so has part: feature:1305302-1305848:-1:exon
so has part: feature:1279707-1279839:-1:exon
so has part: feature:1277425-1278704:-1:exon
so has part: feature:1275945-1276527:-1:exon
so has part: feature:1274806-1274988:-1:exon
so has part: feature:1273054-1273160:-1:exon
so has part: feature:1267653-1269828:-1:exon

position:1315243:-1
position: 1315243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1314824-1315243:-1:exon

position:1314824:-1
position: 1314824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1305302-1305848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1279707-1279839:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1277425-1278704:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1275945-1276527:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1274806-1274988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1273054-1273160:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267653-1269828:-1:exon

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNSRQRLQEIREGLKQPPKTPAPGPPAGPGSDAALGAKALGGKDAARQQQTRTAPKFGPYQKALREIRYSLLPFANESGPSAAAEVNRQMLQELVDAGCDQEMAGRALKQTGSRSIEAALEFISKMGYLEPGKEQIVRVVKQTSPGKGLAPASVPRRPSFEGAGDPFPPYAQVSGPAFEGPAALEEAPRQYPDFLFAAVGPHCRPHPPKGYAAAGEAAGMSLPGPGGPAPPLQGPHYRAPLLVPGEPLGYGVQRSPSFQSKTPPEVGGYAGLAAKGPAVQVQVQPGLAFPPPGGAAAYAPHPHPKQPHPVHAGGPRGAVFAGDSPPPGLATPSRTGLGAERFEPSAPPAPQWPSAGLARRDSLQKPGPSRTGSFNGHQAAAAPSPNAITAVTAAHILHAVKSVRVMRPEPQTAVGPSHPAWVPPPGPALEGLEPQDEHPPGPGGAEARGRPPPYPRHLLRPQGRAEQYDVDGLCAGLQQGLRGSRAAEPPDGSPRSPRGAKGEKAGKDRKQIQTSPVPVRRGCRDEEKRESRIKSYSPSAFKFFMEQHVENVLKTYQQKVARRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKVKTLGVGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDMMSLLVRMDVFPEQLARFYVAELTLAIESVHRMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHSRQDSMEPSDLWDDVSNCRCGDRLKTLEQRTRRQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWESTLHIPAQVELSPEARDLIAKLCCSAEHRLGRNGADDLKAHPFLGAIDFSGDIRRQPAPYVPTISHPMDTSNFDPVDEEGPWQDGSEDSSKAWDALGPPGSRHPEHAFYEFTFRRFFDDNGYPFRCPKPAVAETGTEAEQPAAGGPAPGAQAGGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(1269331..1269828,1273054..1273160,1274806..1274988,1275945..1276527,1277425..1278704,1279707..1279839,1305302..1305640))
location: region:1269331-1305640:-1
so has part: feature:1305302-1305640:-1:exon
so has part: feature:1279707-1279839:-1:exon
so has part: feature:1277425-1278704:-1:exon
so has part: feature:1275945-1276527:-1:exon
so has part: feature:1274806-1274988:-1:exon
so has part: feature:1273054-1273160:-1:exon
so has part: feature:1269331-1269828:-1:exon

XP_036687521.1
type: Protein
SIO_000068: ncbiprotein

position:1269331:-1
position: 1269331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1305640:-1
position: 1305640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305302-1305640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279707-1279839:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277425-1278704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275945-1276527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1274806-1274988:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273054-1273160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269331-1269828:-1:exon

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNSRQRLQEIREGLKQPPKTPAPGPPAGPGSDAALGAKALGGKDAARQQQTRTAPKFGPYQKALREIRYSLLPFANESGPSAAAEVNRQMLQELVDAGCDQEMAGRALKQTGSRSIEAALEFISKMGYLEPGKEQIVRVVKQTSPGKGLAPASVPRRPSFEGAGDPFPPYAQVSGPAFEGPAALEEAPRQYPDFLFAAVGPHCRPHPPKGYAAAGEAAGMSLPGPGGPAPPLQGPHYRAPLLVPGEPLGYGVQRSPSFQSKTPPEVGGYAGLAAKGPAVQVQVQPGLAFPPPGGAAAYAPHPHPKQPHPVHAGGPRGAVFAGDSPPPGLATPSRTGLGAERFEPSAPPAPQWPSAGLARRDSLQKPGPSRTGSFNGHQAAAAPSPNAITAVTAAHILHAVKSVRVMRPEPQTAVGPSHPAWVPPPGPALEGLEPQDEHPPGPGGAEARGRPPPYPRHLLRPQGRAEQYDVDGLCAGLQQGLRGSRAAEPPDGSPRSPRGAKGEKAGKDRKQIQTSPVPVRRGCRDEEKRESRIKSYSPSAFKFFMEQHVENVLKTYQQKVARRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKVKTLGVGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDMMSLLVRMDVFPEQLARFYVAELTLAIESVHRMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHSRQDSMEPSDLWDDVSNCRCGDRLKTLEQRTRRQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWESTLHIPAQVELSPEARDLIAKLCCSAEHRLGRNGADDLKAHPFLGAIDFSGDIRRQPAPYVPTISHPMDTSNFDPVDEEGPWQDGSEDSSKAWDALGPPGSRHPEHAFYEFTFRRFFDDNGYPFRCPKPAVAETGTEAEQPAAGGPAPGAQAGGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(1269331..1269828,1273054..1273160,1274806..1274988,1275945..1276527,1277425..1278704,1279707..1279839,1305302..1305640))
location: region:1269331-1305640:-1
so has part: feature:1305302-1305640:-1:exon
so has part: feature:1279707-1279839:-1:exon
so has part: feature:1277425-1278704:-1:exon
so has part: feature:1275945-1276527:-1:exon
so has part: feature:1274806-1274988:-1:exon
so has part: feature:1273054-1273160:-1:exon
so has part: feature:1269331-1269828:-1:exon

XP_036687522.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305302-1305640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279707-1279839:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277425-1278704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275945-1276527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1274806-1274988:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273054-1273160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269331-1269828:-1:exon

LATS2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LATS2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase LATS2
translation: MRPKTFPATTYSGNSRQRLQEIREGLKQPPKTPAPGPPAGPGSDAALGAKALGGKDAARQQQTRTAPKFGPYQKALREIRYSLLPFANESGPSAAAEVNRQMLQELVDAGCDQEMAGRALKQTGSRSIEAALEFISKMGYLEPGKEQIVRVVKQTSPGKGLAPASVPRRPSFEGAGDPFPPYAQVSGPAFEGPAALEEAPRQYPDFLFAAVGPHCRPHPPKGYAAAGEAAGMSLPGPGGPAPPLQGPHYRAPLLVPGEPLGYGVQRSPSFQSKTPPEVGGYAGLAAKGPAVQVQVQPGLAFPPPGGAAAYAPHPHPKQPHPVHAGGPRGAVFAGDSPPPGLATPSRTGLGAERFEPSAPPAPQWPSAGLARRDSLQKPGPSRTGSFNGHQAAAAPSPNAITAVTAAHILHAVKSVRVMRPEPQTAVGPSHPAWVPPPGPALEGLEPQDEHPPGPGGAEARGRPPPYPRHLLRPQGRAEQYDVDGLCAGLQQGLRGSRAAEPPDGSPRSPRGAKGEKAGKDRKQIQTSPVPVRRGCRDEEKRESRIKSYSPSAFKFFMEQHVENVLKTYQQKVARRLQLEQEMAKAGLCEAEQEQMRKILYQKESNYNRLKRAKMDKSMFVKVKTLGVGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDSLYFVMDYIPGGDMMSLLVRMDVFPEQLARFYVAELTLAIESVHRMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHSRQDSMEPSDLWDDVSNCRCGDRLKTLEQRTRRQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWESTLHIPAQVELSPEARDLIAKLCCSAEHRLGRNGADDLKAHPFLGAIDFSGDIRRQPAPYVPTISHPMDTSNFDPVDEEGPWQDGSEDSSKAWDALGPPGSRHPEHAFYEFTFRRFFDDNGYPFRCPKPAVAETGTEAEQPAAGGPAPGAQAGGCQPVYV
SIO_010081: LATS2
subclass of: SO_0000673
so part of: LATS2
location: complement(join(1269331..1269828,1273054..1273160,1274806..1274988,1275945..1276527,1277425..1278704,1279707..1279839,1305302..1305640))
location: region:1269331-1305640:-1
so has part: feature:1305302-1305640:-1:exon
so has part: feature:1279707-1279839:-1:exon
so has part: feature:1277425-1278704:-1:exon
so has part: feature:1275945-1276527:-1:exon
so has part: feature:1274806-1274988:-1:exon
so has part: feature:1273054-1273160:-1:exon
so has part: feature:1269331-1269828:-1:exon

XP_036687523.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1305302-1305640:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1279707-1279839:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1277425-1278704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275945-1276527:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1274806-1274988:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1273054-1273160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1269331-1269828:-1:exon

LOC118884178
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1282328..1283440
location: region:1282328-1283440:1
so has part: feature:1282328-1283440:1:exon
subclass of: SO_0000011

118884178
type: Gene
SIO_000068: ncbigene

position:1282328:1
position: 1282328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1283440:1
position: 1283440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282328-1283440:1:exon

LOC118884178
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884178
product: uncharacterized LOC118884178
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005017223.1
SIO_010081: LOC118884178
subclass of: SO_0000673
so part of: LOC118884178
location: join(1282328..1282850,1283382..1283440)
location: region:1282328-1283440:1
so has part: feature:1282328-1282850:1:exon
so has part: feature:1283382-1283440:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282328-1282850:1:exon

position:1282850:1
position: 1282850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1283382-1283440:1:exon

position:1283382:1
position: 1283382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118884366
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1320686..1324286
location: region:1320686-1324286:1
so has part: feature:1320686-1324286:1:exon
subclass of: SO_0000011

118884366
type: Gene
SIO_000068: ncbigene

position:1320686:1
position: 1320686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1324286:1
position: 1324286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1320686-1324286:1:exon

LOC118884366
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884366
product: uncharacterized LOC118884366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005017268.1
SIO_010081: LOC118884366
subclass of: SO_0000673
so part of: LOC118884366
location: join(1320686..1320937,1322159..1322243,1324121..1324286)
location: region:1320686-1324286:1
so has part: feature:1320686-1320937:1:exon
so has part: feature:1322159-1322243:1:exon
so has part: feature:1324121-1324286:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1320686-1320937:1:exon

position:1320937:1
position: 1320937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1322159-1322243:1:exon

position:1322159:1
position: 1322159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322243:1
position: 1322243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1324121-1324286:1:exon

position:1324121:1
position: 1324121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118884328
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884328
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1337981..1354128)
location: region:1337981-1354128:-1
so has part: feature:1337981-1354128:-1:exon
subclass of: SO_0000011

118884328
type: Gene
SIO_000068: ncbigene

position:1337981:-1
position: 1337981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354128:-1
position: 1354128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1337981-1354128:-1:exon

LOC118884328
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884328
product: uncharacterized LOC118884328
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005017265.1
SIO_010081: LOC118884328
subclass of: SO_0000673
so part of: LOC118884328
location: complement(join(1337981..1339062,1339308..1339558,1353250..1353473,1354050..1354128))
location: region:1337981-1354128:-1
so has part: feature:1354050-1354128:-1:exon
so has part: feature:1353250-1353473:-1:exon
so has part: feature:1339308-1339558:-1:exon
so has part: feature:1337981-1339062:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1354050-1354128:-1:exon

position:1354050:-1
position: 1354050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1353250-1353473:-1:exon

position:1353250:-1
position: 1353250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1353473:-1
position: 1353473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1339308-1339558:-1:exon

position:1339308:-1
position: 1339308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1339558:-1
position: 1339558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1337981-1339062:-1:exon

position:1339062:-1
position: 1339062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SAP18
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1354258..1360644
location: region:1354258-1360644:1
so has part: feature:1354258-1360644:1:exon
subclass of: SO_0000010

118884166
type: Gene
SIO_000068: ncbigene

position:1354258:1
position: 1354258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1360644:1
position: 1360644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354258-1360644:1:exon

SAP18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SAP18
product: Sin3A associated protein 18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 5 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036831603.1
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(1354258..1354406,1354537..1354646,1358491..1358613,1358875..1360644)
location: region:1354258-1360644:1
so has part: feature:1354258-1354406:1:exon
so has part: feature:1354537-1354646:1:exon
so has part: feature:1358491-1358613:1:exon
so has part: feature:1358875-1360644:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1354258-1354406:1:exon

position:1354406:1
position: 1354406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1354537-1354646:1:exon

position:1354537:1
position: 1354537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1354646:1
position: 1354646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1358491-1358613:1:exon

position:1358491:1
position: 1358491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358613:1
position: 1358613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1358875-1360644:1:exon

position:1358875:1
position: 1358875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SAP18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SAP18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase complex subunit SAP18
translation: MLAVGVGGQGEGLAGRRRKMAVESRVTQEEIKKEPEKPIDREKTCPLLLRVFTTNNGRHHRMDEFSRGNVPSSELQIYTWMDATLKELTSLVKEVYPEARKKGTHFNFAIVFTDLKRPGYRVKEIGSTMSGRKGTDDSMTLQSQKFQIGDYLDIAITPPNRAPPPSGRMRPY
SIO_010081: SAP18
subclass of: SO_0000673
so part of: SAP18
location: join(1354278..1354406,1354537..1354646,1358491..1358613,1358875..1359031)
location: region:1354278-1359031:1
so has part: feature:1354278-1354406:1:exon
so has part: feature:1354537-1354646:1:exon
so has part: feature:1358491-1358613:1:exon
so has part: feature:1358875-1359031:1:exon

XP_036687498.1
type: Protein
SIO_000068: ncbiprotein

position:1354278:1
position: 1354278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1359031:1
position: 1359031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354278-1354406:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1354537-1354646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1358491-1358613:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358875-1359031:1:exon

SKA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1360824..1386480)
location: region:1360824-1386480:-1
so has part: feature:1360824-1386480:-1:exon
subclass of: SO_0000010

118884164
type: Gene
SIO_000068: ncbigene

position:1360824:-1
position: 1360824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386480:-1
position: 1386480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1360824-1386480:-1:exon

SKA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9771
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005017218.1
SIO_010081: SKA3
so part of: SKA3
location: complement(join(1360824..1363318,1363804..1366174,1366474..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1386300..1386480))
location: region:1360824-1386480:-1
so has part: feature:1386300-1386480:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366474-1366604:-1:exon
so has part: feature:1363804-1366174:-1:exon
so has part: feature:1360824-1363318:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1386300-1386480:-1:exon

position:1386300:-1
position: 1386300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

position:1383079:-1
position: 1383079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383140:-1
position: 1383140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

position:1382806:-1
position: 1382806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1382971:-1
position: 1382971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

position:1379254:-1
position: 1379254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1379653:-1
position: 1379653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

position:1375616:-1
position: 1375616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375701:-1
position: 1375701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

position:1369460:-1
position: 1369460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1369545:-1
position: 1369545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

position:1368022:-1
position: 1368022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368225:-1
position: 1368225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1366474-1366604:-1:exon

position:1366474:-1
position: 1366474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366604:-1
position: 1366604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1363804-1366174:-1:exon

position:1363804:-1
position: 1363804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1366174:-1
position: 1366174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1360824-1363318:-1:exon

position:1363318:-1
position: 1363318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SKA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9771
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005017217.1
SIO_010081: SKA3
so part of: SKA3
location: complement(join(1360824..1363323,1363804..1366174,1366474..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1386300..1386480))
location: region:1360824-1386480:-1
so has part: feature:1386300-1386480:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366474-1366604:-1:exon
so has part: feature:1363804-1366174:-1:exon
so has part: feature:1360824-1363323:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1386300-1386480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366474-1366604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1363804-1366174:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1360824-1363323:-1:exon

position:1363323:-1
position: 1363323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SKA3
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9771
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005017219.1
SIO_010081: SKA3
so part of: SKA3
location: complement(join(1360824..1361737,1361814..1366174,1366474..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1386300..1386480))
location: region:1360824-1386480:-1
so has part: feature:1386300-1386480:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366474-1366604:-1:exon
so has part: feature:1361814-1366174:-1:exon
so has part: feature:1360824-1361737:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1386300-1386480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366474-1366604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1361814-1366174:-1:exon

position:1361814:-1
position: 1361814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1360824-1361737:-1:exon

position:1361737:-1
position: 1361737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 long SRA read, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831595.1
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(1360824..1366174,1366474..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1386300..1386480))
location: region:1360824-1386480:-1
so has part: feature:1386300-1386480:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366474-1366604:-1:exon
so has part: feature:1360824-1366174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1386300-1386480:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366474-1366604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360824-1366174:-1:exon

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831597.1
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(1360824..1366174,1366474..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1383389..1383524))
location: region:1360824-1383524:-1
so has part: feature:1383389-1383524:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366474-1366604:-1:exon
so has part: feature:1360824-1366174:-1:exon

position:1383524:-1
position: 1383524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383389-1383524:-1:exon

position:1383389:-1
position: 1383389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366474-1366604:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1360824-1366174:-1:exon

SKA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SKA3
product: spindle and kinetochore associated complex subunit 3, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831596.1
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(1366200..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1386300..1386439))
location: region:1366200-1386439:-1
so has part: feature:1386300-1386439:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366200-1366604:-1:exon

position:1366200:-1
position: 1366200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386439:-1
position: 1386439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386300-1386439:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366200-1366604:-1:exon

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3 isoform X1
translation: MDLIRGFCGKLRSLAVTLDGETARLQRALDGEDSDFEDYPMRVLHDLHSEVQTLKDDVNILLDEASLESQESIGFIKATKVLMKKNSMDIMKIREFFQKYGYNPRAKENSVDEQEVIDSKPESNKRDNPEKPDVKGDLSDSAPPSSSVSEKPPRSPQLSDFGLERYMISQVLPNPPQAVNNEKEEPKILTPFSKRPLVKTPKCALKMDDFECVTPKLEHFGISEYTMCLNEDYTVGLKNVKNNSEEAIETEPVTNNNFFATPGPITQPLEKNDAKHTHSPVAPTFCTPGLKIPSTKNSTALVSTNYPLSKTNSSSNDLEMKDSTSLVLNSDECFENFADPSSPTISSYENLLRTPTPPEVTTIPEDIRQILSKYNSNLATLVAVREVPPSKVFLPRCEGQDVRNAGNRENW
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(1366476..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1386300..1386402))
location: region:1366476-1386402:-1
so has part: feature:1386300-1386402:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366476-1366604:-1:exon

XP_036687490.1
type: Protein
SIO_000068: ncbiprotein

position:1366476:-1
position: 1366476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386402:-1
position: 1386402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386300-1386402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366476-1366604:-1:exon

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3 isoform X1
translation: MDLIRGFCGKLRSLAVTLDGETARLQRALDGEDSDFEDYPMRVLHDLHSEVQTLKDDVNILLDEASLESQESIGFIKATKVLMKKNSMDIMKIREFFQKYGYNPRAKENSVDEQEVIDSKPESNKRDNPEKPDVKGDLSDSAPPSSSVSEKPPRSPQLSDFGLERYMISQVLPNPPQAVNNEKEEPKILTPFSKRPLVKTPKCALKMDDFECVTPKLEHFGISEYTMCLNEDYTVGLKNVKNNSEEAIETEPVTNNNFFATPGPITQPLEKNDAKHTHSPVAPTFCTPGLKIPSTKNSTALVSTNYPLSKTNSSSNDLEMKDSTSLVLNSDECFENFADPSSPTISSYENLLRTPTPPEVTTIPEDIRQILSKYNSNLATLVAVREVPPSKVFLPRCEGQDVRNAGNRENW
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(1366476..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383140,1386300..1386402))
location: region:1366476-1386402:-1
so has part: feature:1386300-1386402:-1:exon
so has part: feature:1383079-1383140:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366476-1366604:-1:exon

XP_036687491.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1386300-1386402:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1383079-1383140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1366476-1366604:-1:exon

SKA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SKA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spindle and kinetochore-associated protein 3 isoform X2
translation: MRVLHDLHSEVQTLKDDVNILLDEASLESQESIGFIKATKVLMKKNSMDIMKIREFFQKYGYNPRAKENSVDEQEVIDSKPESNKRDNPEKPDVKGDLSDSAPPSSSVSEKPPRSPQLSDFGLERYMISQVLPNPPQAVNNEKEEPKILTPFSKRPLVKTPKCALKMDDFECVTPKLEHFGISEYTMCLNEDYTVGLKNVKNNSEEAIETEPVTNNNFFATPGPITQPLEKNDAKHTHSPVAPTFCTPGLKIPSTKNSTALVSTNYPLSKTNSSSNDLEMKDSTSLVLNSDECFENFADPSSPTISSYENLLRTPTPPEVTTIPEDIRQILSKYNSNLATLVAVREVPPSKVFLPRCEGQDVRNAGNRENW
SIO_010081: SKA3
subclass of: SO_0000673
so part of: SKA3
location: complement(join(1366476..1366604,1368022..1368225,1369460..1369545,1375616..1375701,1379254..1379653,1382806..1382971,1383079..1383123))
location: region:1366476-1383123:-1
so has part: feature:1383079-1383123:-1:exon
so has part: feature:1382806-1382971:-1:exon
so has part: feature:1379254-1379653:-1:exon
so has part: feature:1375616-1375701:-1:exon
so has part: feature:1369460-1369545:-1:exon
so has part: feature:1368022-1368225:-1:exon
so has part: feature:1366476-1366604:-1:exon

XP_036687492.1
type: Protein
SIO_000068: ncbiprotein

position:1383123:-1
position: 1383123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1383079-1383123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1382806-1382971:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1379254-1379653:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1375616-1375701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1369460-1369545:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1368022-1368225:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1366476-1366604:-1:exon

MRPL57
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1386499..1387758
location: region:1386499-1387758:1
so has part: feature:1386499-1387758:1:exon
subclass of: SO_0000010

118884167
type: Gene
SIO_000068: ncbigene

position:1386499:1
position: 1386499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387758:1
position: 1387758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386499-1387758:1:exon

MRPL57
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MRPL57
product: mitochondrial ribosomal protein L57
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036831604.1
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: join(1386499..1386619,1386731..1387758)
location: region:1386499-1387758:1
so has part: feature:1386499-1386619:1:exon
so has part: feature:1386731-1387758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1386499-1386619:1:exon

position:1386619:1
position: 1386619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1386731-1387758:1:exon

position:1386731:1
position: 1386731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL57
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MRPL57
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal protein 63, mitochondrial
translation: MFLTALLRRGRIPGRQWIGKHRRPRPVSAQAKQNMVRRLEVEAENHYWLSRPFLTVEQERGHAAARRAAAFQALKAAQVARFPAHRRLEDQLGHLKVTGKWS
SIO_010081: MRPL57
subclass of: SO_0000673
so part of: MRPL57
location: 1386736..1387044
location: region:1386736-1387044:1
so has part: feature:1386736-1387044:1:exon

XP_036687499.1
type: Protein
SIO_000068: ncbiprotein

position:1386736:1
position: 1386736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1387044:1
position: 1387044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386736-1387044:1:exon

ZDHHC20
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1390580..1459868)
location: region:1390580-1459868:-1
so has part: feature:1390580-1459868:-1:exon
subclass of: SO_0000010

118884165
type: Gene
SIO_000068: ncbigene

position:1390580:-1
position: 1390580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459868:-1
position: 1459868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1390580-1459868:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036831599.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(1390580..1391425,1394303..1394418,1395802..1395891,1399978..1400104,1403066..1403198,1412134..1412254,1412844..1412876,1414188..1414257,1422532..1422652,1428240..1428343,1432313..1432339,1459613..1459867))
location: region:1390580-1459867:-1
so has part: feature:1459613-1459867:-1:exon
so has part: feature:1432313-1432339:-1:exon
so has part: feature:1428240-1428343:-1:exon
so has part: feature:1422532-1422652:-1:exon
so has part: feature:1414188-1414257:-1:exon
so has part: feature:1412844-1412876:-1:exon
so has part: feature:1412134-1412254:-1:exon
so has part: feature:1403066-1403198:-1:exon
so has part: feature:1399978-1400104:-1:exon
so has part: feature:1395802-1395891:-1:exon
so has part: feature:1394303-1394418:-1:exon
so has part: feature:1390580-1391425:-1:exon

position:1459867:-1
position: 1459867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459613-1459867:-1:exon

position:1459613:-1
position: 1459613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1432313-1432339:-1:exon

position:1432313:-1
position: 1432313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432339:-1
position: 1432339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1428240-1428343:-1:exon

position:1428240:-1
position: 1428240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428343:-1
position: 1428343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1422532-1422652:-1:exon

position:1422532:-1
position: 1422532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422652:-1
position: 1422652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1414188-1414257:-1:exon

position:1414188:-1
position: 1414188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414257:-1
position: 1414257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1412844-1412876:-1:exon

position:1412844:-1
position: 1412844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412876:-1
position: 1412876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1412134-1412254:-1:exon

position:1412134:-1
position: 1412134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412254:-1
position: 1412254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1403066-1403198:-1:exon

position:1403066:-1
position: 1403066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1403198:-1
position: 1403198
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1399978-1400104:-1:exon

position:1399978:-1
position: 1399978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1400104:-1
position: 1400104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1395802-1395891:-1:exon

position:1395802:-1
position: 1395802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395891:-1
position: 1395891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1394303-1394418:-1:exon

position:1394303:-1
position: 1394303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394418:-1
position: 1394418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1390580-1391425:-1:exon

position:1391425:-1
position: 1391425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_036831598.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(1390580..1391425,1392843..1392920,1394303..1394418,1395802..1395891,1399978..1400104,1403066..1403198,1412134..1412254,1412844..1412876,1414188..1414257,1422532..1422652,1428240..1428343,1432313..1432339,1459613..1459867))
location: region:1390580-1459867:-1
so has part: feature:1459613-1459867:-1:exon
so has part: feature:1432313-1432339:-1:exon
so has part: feature:1428240-1428343:-1:exon
so has part: feature:1422532-1422652:-1:exon
so has part: feature:1414188-1414257:-1:exon
so has part: feature:1412844-1412876:-1:exon
so has part: feature:1412134-1412254:-1:exon
so has part: feature:1403066-1403198:-1:exon
so has part: feature:1399978-1400104:-1:exon
so has part: feature:1395802-1395891:-1:exon
so has part: feature:1394303-1394418:-1:exon
so has part: feature:1392843-1392920:-1:exon
so has part: feature:1390580-1391425:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1459613-1459867:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432313-1432339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428240-1428343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422532-1422652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414188-1414257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412844-1412876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412134-1412254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1403066-1403198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1399978-1400104:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395802-1395891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1394303-1394418:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1392843-1392920:-1:exon

position:1392843:-1
position: 1392843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392920:-1
position: 1392920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1390580-1391425:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X2
translation: MAPCTFWRCCQRTVGWVPVLFITFVVVWSYYAYVVELCVFTLSGNGENGKAVVYLVAFHLFIVMFVWSYWMTIFTSPASPSKEFCLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASKTVRYCERCQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVATTVLQYFIKFWTNELSDTRAKFHILFLFFVSTMFFISVLSLLSYHCWLVGKNRTTIESFRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFSSQGDGCSFPTRLVGTDPEQASVSNHSENTRSIGSNPPFPIKPLSESKNRLLDSEPQWLENGSEEGVVRSGL
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(1391418..1391425,1394303..1394418,1395802..1395891,1399978..1400104,1403066..1403198,1412134..1412254,1412844..1412876,1414188..1414257,1422532..1422652,1428240..1428343,1432313..1432339,1459613..1459730))
location: region:1391418-1459730:-1
so has part: feature:1459613-1459730:-1:exon
so has part: feature:1432313-1432339:-1:exon
so has part: feature:1428240-1428343:-1:exon
so has part: feature:1422532-1422652:-1:exon
so has part: feature:1414188-1414257:-1:exon
so has part: feature:1412844-1412876:-1:exon
so has part: feature:1412134-1412254:-1:exon
so has part: feature:1403066-1403198:-1:exon
so has part: feature:1399978-1400104:-1:exon
so has part: feature:1395802-1395891:-1:exon
so has part: feature:1394303-1394418:-1:exon
so has part: feature:1391418-1391425:-1:exon

XP_036687494.1
type: Protein
SIO_000068: ncbiprotein

position:1391418:-1
position: 1391418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1459730:-1
position: 1459730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459613-1459730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432313-1432339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428240-1428343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422532-1422652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414188-1414257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412844-1412876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412134-1412254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1403066-1403198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1399978-1400104:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395802-1395891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1394303-1394418:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1391418-1391425:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X1
translation: MAPCTFWRCCQRTVGWVPVLFITFVVVWSYYAYVVELCVFTLSGNGENGKAVVYLVAFHLFIVMFVWSYWMTIFTSPASPSKEFCLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASKTVRYCERCQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVATTVLQYFIKFWTNELSDTRAKFHILFLFFVSTMFFISVLSLLSYHCWLVGKNRTTIESFRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFSSQGDGCSFPTRLVGTDPEQASVSNHSENTRSIGSNPPFPIKPLSESKNRLLDSEPQWLENGSEEGVVRSGTNNHVAVAIEN
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(1392883..1392920,1394303..1394418,1395802..1395891,1399978..1400104,1403066..1403198,1412134..1412254,1412844..1412876,1414188..1414257,1422532..1422652,1428240..1428343,1432313..1432339,1459613..1459730))
location: region:1392883-1459730:-1
so has part: feature:1459613-1459730:-1:exon
so has part: feature:1432313-1432339:-1:exon
so has part: feature:1428240-1428343:-1:exon
so has part: feature:1422532-1422652:-1:exon
so has part: feature:1414188-1414257:-1:exon
so has part: feature:1412844-1412876:-1:exon
so has part: feature:1412134-1412254:-1:exon
so has part: feature:1403066-1403198:-1:exon
so has part: feature:1399978-1400104:-1:exon
so has part: feature:1395802-1395891:-1:exon
so has part: feature:1394303-1394418:-1:exon
so has part: feature:1392883-1392920:-1:exon

XP_036687493.1
type: Protein
SIO_000068: ncbiprotein

position:1392883:-1
position: 1392883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459613-1459730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432313-1432339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428240-1428343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422532-1422652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414188-1414257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412844-1412876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412134-1412254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1403066-1403198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1399978-1400104:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395802-1395891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1394303-1394418:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1392883-1392920:-1:exon

ZDHHC20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: ZDHHC20
product: zinc finger DHHC-type palmitoyltransferase 20, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036831600.1
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(1394303..1394418,1394767..1394811,1395802..1395891,1399978..1400104,1403066..1403198,1412134..1412254,1412844..1412876,1414188..1414257,1422532..1422652,1428240..1428343,1432313..1432339,1459613..1459868))
location: region:1394303-1459868:-1
so has part: feature:1459613-1459868:-1:exon
so has part: feature:1432313-1432339:-1:exon
so has part: feature:1428240-1428343:-1:exon
so has part: feature:1422532-1422652:-1:exon
so has part: feature:1414188-1414257:-1:exon
so has part: feature:1412844-1412876:-1:exon
so has part: feature:1412134-1412254:-1:exon
so has part: feature:1403066-1403198:-1:exon
so has part: feature:1399978-1400104:-1:exon
so has part: feature:1395802-1395891:-1:exon
so has part: feature:1394767-1394811:-1:exon
so has part: feature:1394303-1394418:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1459613-1459868:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432313-1432339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428240-1428343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422532-1422652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414188-1414257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412844-1412876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412134-1412254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1403066-1403198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1399978-1400104:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395802-1395891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1394767-1394811:-1:exon

position:1394767:-1
position: 1394767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394811:-1
position: 1394811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1394303-1394418:-1:exon

ZDHHC20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: ZDHHC20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: palmitoyltransferase ZDHHC20 isoform X3
translation: MAPCTFWRCCQRTVGWVPVLFITFVVVWSYYAYVVELCVFTLSGNGENGKAVVYLVAFHLFIVMFVWSYWMTIFTSPASPSKEFCLSNSEKERYEKEFSQERQQEILRRAARDLPIYTTSASKTVRYCERCQLIKPDRAHHCSACDMCILKMDHHCPWVNNCVGFSNYKFFLLFLLYSLLYCLFVATTVLQYFIKFWTNELSDTRAKFHILFLFFVSTMFFISVLSLLSYHCWLVGKNRTTIESFRAPTFSYGPDGNGFSLGCSKNWRQVFGDEKKYWLLPIFSSQGDGCSFPTRLVGTDPEQASVSNHSENTRRSILQR
SIO_010081: ZDHHC20
subclass of: SO_0000673
so part of: ZDHHC20
location: complement(join(1394793..1394811,1395802..1395891,1399978..1400104,1403066..1403198,1412134..1412254,1412844..1412876,1414188..1414257,1422532..1422652,1428240..1428343,1432313..1432339,1459613..1459730))
location: region:1394793-1459730:-1
so has part: feature:1459613-1459730:-1:exon
so has part: feature:1432313-1432339:-1:exon
so has part: feature:1428240-1428343:-1:exon
so has part: feature:1422532-1422652:-1:exon
so has part: feature:1414188-1414257:-1:exon
so has part: feature:1412844-1412876:-1:exon
so has part: feature:1412134-1412254:-1:exon
so has part: feature:1403066-1403198:-1:exon
so has part: feature:1399978-1400104:-1:exon
so has part: feature:1395802-1395891:-1:exon
so has part: feature:1394793-1394811:-1:exon

XP_036687495.1
type: Protein
SIO_000068: ncbiprotein

position:1394793:-1
position: 1394793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1459613-1459730:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1432313-1432339:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1428240-1428343:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422532-1422652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1414188-1414257:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412844-1412876:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1412134-1412254:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1403066-1403198:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1399978-1400104:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1395802-1395891:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1394793-1394811:-1:exon

MICU2
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1468846..1557795)
location: region:1468846-1557795:-1
so has part: feature:1468846-1557795:-1:exon
subclass of: SO_0000010

118884118
type: Gene
SIO_000068: ncbigene

position:1468846:-1
position: 1468846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557795:-1
position: 1557795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1468846-1557795:-1:exon

MICU2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MICU2
product: mitochondrial calcium uptake 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036831482.1
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(1468846..1469527,1471135..1471292,1471730..1471838,1475765..1475936,1480019..1480116,1485186..1485251,1499037..1499119,1500081..1500128,1507527..1507602,1507705..1507736,1528290..1528434,1557577..1557795))
location: region:1468846-1557795:-1
so has part: feature:1557577-1557795:-1:exon
so has part: feature:1528290-1528434:-1:exon
so has part: feature:1507705-1507736:-1:exon
so has part: feature:1507527-1507602:-1:exon
so has part: feature:1500081-1500128:-1:exon
so has part: feature:1499037-1499119:-1:exon
so has part: feature:1485186-1485251:-1:exon
so has part: feature:1480019-1480116:-1:exon
so has part: feature:1475765-1475936:-1:exon
so has part: feature:1471730-1471838:-1:exon
so has part: feature:1471135-1471292:-1:exon
so has part: feature:1468846-1469527:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1557577-1557795:-1:exon

position:1557577:-1
position: 1557577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1528290-1528434:-1:exon

position:1528290:-1
position: 1528290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1528434:-1
position: 1528434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1507705-1507736:-1:exon

position:1507705:-1
position: 1507705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507736:-1
position: 1507736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1507527-1507602:-1:exon

position:1507527:-1
position: 1507527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1507602:-1
position: 1507602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1500081-1500128:-1:exon

position:1500081:-1
position: 1500081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1500128:-1
position: 1500128
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1499037-1499119:-1:exon

position:1499037:-1
position: 1499037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1499119:-1
position: 1499119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1485186-1485251:-1:exon

position:1485186:-1
position: 1485186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1485251:-1
position: 1485251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1480019-1480116:-1:exon

position:1480019:-1
position: 1480019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1480116:-1
position: 1480116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1475765-1475936:-1:exon

position:1475765:-1
position: 1475765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1475936:-1
position: 1475936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1471730-1471838:-1:exon

position:1471730:-1
position: 1471730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471838:-1
position: 1471838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1471135-1471292:-1:exon

position:1471135:-1
position: 1471135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471292:-1
position: 1471292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1468846-1469527:-1:exon

position:1469527:-1
position: 1469527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MICU2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MICU2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium uptake protein 2, mitochondrial
translation: MAAAAGGARLAAWGGRLRRGLAAGRQAWPSSGPVAAAVVGVALAGAGATWYHGRVNVAAPQGGLTVVAQRSVDSGEMKGKPSPRKQRFMQFSSLEHGGEYYMTPRDFLFSVMFDQIERKTSVKRLTNKDIEDILAGIKRAGCGSTFFRDLGDKGLVSYTEYLFLLTILTKPHTGFHVAFKMLDADGDEMVEKKEFFKLQKIISKQDDLKTTITNETECQEPTVKEPEINTTLQIHFFGKRGERKLHYKEFRRFMENLQTEVQEMEFLQFSKGLSFMRKEDFAEWLLFFTNTENKDVYWKNVSEKLSAGESISLDEFKSFCHFATHLEDFAIAMQMFSLAHRPVRLAEFKRAVKVATGQELSNNILDAVFKIFDVDGDECLSHEEFLGVLKNRMHRGLWVPQQLSIQEYWKCVKKESIKGVKEVWKQAGRGLL
SIO_010081: MICU2
subclass of: SO_0000673
so part of: MICU2
location: complement(join(1469423..1469527,1471135..1471292,1471730..1471838,1475765..1475936,1480019..1480116,1485186..1485251,1499037..1499119,1500081..1500128,1507527..1507602,1507705..1507736,1528290..1528434,1557577..1557783))
location: region:1469423-1557783:-1
so has part: feature:1557577-1557783:-1:exon
so has part: feature:1528290-1528434:-1:exon
so has part: feature:1507705-1507736:-1:exon
so has part: feature:1507527-1507602:-1:exon
so has part: feature:1500081-1500128:-1:exon
so has part: feature:1499037-1499119:-1:exon
so has part: feature:1485186-1485251:-1:exon
so has part: feature:1480019-1480116:-1:exon
so has part: feature:1475765-1475936:-1:exon
so has part: feature:1471730-1471838:-1:exon
so has part: feature:1471135-1471292:-1:exon
so has part: feature:1469423-1469527:-1:exon

XP_036687377.1
type: Protein
SIO_000068: ncbiprotein

position:1469423:-1
position: 1469423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1557783:-1
position: 1557783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557577-1557783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1528290-1528434:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1507705-1507736:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1507527-1507602:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1500081-1500128:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1499037-1499119:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1485186-1485251:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1480019-1480116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1475765-1475936:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1471730-1471838:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1471135-1471292:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1469423-1469527:-1:exon

LOC118884318
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884318
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1603973..1610365)
location: region:1603973-1610365:-1
so has part: feature:1603973-1610365:-1:exon
subclass of: SO_0000011

118884318
type: Gene
SIO_000068: ncbigene

position:1603973:-1
position: 1603973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1610365:-1
position: 1610365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1603973-1610365:-1:exon

LOC118884318
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884318
product: uncharacterized LOC118884318
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005017263.1
SIO_010081: LOC118884318
subclass of: SO_0000673
so part of: LOC118884318
location: complement(join(1603973..1604073,1607491..1607881,1610053..1610365))
location: region:1603973-1610365:-1
so has part: feature:1610053-1610365:-1:exon
so has part: feature:1607491-1607881:-1:exon
so has part: feature:1603973-1604073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1610053-1610365:-1:exon

position:1610053:-1
position: 1610053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1607491-1607881:-1:exon

position:1607491:-1
position: 1607491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1607881:-1
position: 1607881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1603973-1604073:-1:exon

position:1604073:-1
position: 1604073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FGF9
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1610635..1638153
location: region:1610635-1638153:1
so has part: feature:1610635-1638153:1:exon
subclass of: SO_0000010

118884435
type: Gene
SIO_000068: ncbigene

position:1610635:1
position: 1610635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1638153:1
position: 1638153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1610635-1638153:1:exon

FGF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: FGF9
product: fibroblast growth factor 9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036832081.1
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(1610635..1611572,1620049..1620152,1636721..1638153)
location: region:1610635-1638153:1
so has part: feature:1610635-1611572:1:exon
so has part: feature:1620049-1620152:1:exon
so has part: feature:1636721-1638153:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1610635-1611572:1:exon

position:1611572:1
position: 1611572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1620049-1620152:1:exon

position:1620049:1
position: 1620049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1620152:1
position: 1620152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1636721-1638153:1:exon

position:1636721:1
position: 1636721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FGF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: FGF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibroblast growth factor 9
translation: MAPLGEVGNYFGVQDAAPFGNVPVLPADSPVLLSDHLGQSEAGGLPRGPAVTDLDHLKGILRRRQLYCRTGFHLEIFPNGTIQGTRKDHSRFGILEFISIAVGLVSIRGVDSGLYLGMNEKGELYGSEKLTQECVFREQFEENWYNTYSSNLYKHVDTGRRFYVALNKDGTPREGTRTKRHQKFTHFLPRPVDPDKVPELYKGILSQS
SIO_010081: FGF9
subclass of: SO_0000673
so part of: FGF9
location: join(1611296..1611572,1620049..1620152,1636721..1636966)
location: region:1611296-1636966:1
so has part: feature:1611296-1611572:1:exon
so has part: feature:1620049-1620152:1:exon
so has part: feature:1636721-1636966:1:exon

XP_036687976.1
type: Protein
SIO_000068: ncbiprotein

position:1611296:1
position: 1611296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1636966:1
position: 1636966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611296-1611572:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1620049-1620152:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1636721-1636966:1:exon

LOC118884386
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1852204..1857875
location: region:1852204-1857875:1
so has part: feature:1852204-1857875:1:exon
subclass of: SO_0000010

118884386
type: Gene
SIO_000068: ncbigene

position:1852204:1
position: 1852204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1857875:1
position: 1857875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1852204-1857875:1:exon

LOC118884386
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LOC118884386
product: uncharacterized LOC118884386
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036832036.1
SIO_010081: LOC118884386
subclass of: SO_0000673
so part of: LOC118884386
location: join(1852204..1852768,1857386..1857875)
location: region:1852204-1857875:1
so has part: feature:1852204-1852768:1:exon
so has part: feature:1857386-1857875:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1852204-1852768:1:exon

position:1852768:1
position: 1852768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1857386-1857875:1:exon

position:1857386:1
position: 1857386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118884386
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LOC118884386
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC118884386
translation: MGCRGRPLGLQVHGRFLCPHSGGQCRGLNVSTCRHLNAGRYPVKTQLLVKDCKMQPQDRPAPLRSGLEGPAAPGLVHTRRFVSLQKQALGILPEAPTPLTILTLSAGVLARSWKNPDVKIGSRLVIDVSLMGCVFAAVQRTYSCDSGKLWSLWLWPNGRKNCFFTAFSGYSPGRLCTVCLSRRRCPGTCVLNKTDVCSPRPSVLQRPPALLGRGLLAPVTAWPGCQGLLWVGPFSASGATSV
SIO_010081: LOC118884386
subclass of: SO_0000673
so part of: LOC118884386
location: join(1852530..1852768,1857386..1857875)
location: region:1852530-1857875:1
so has part: feature:1852530-1852768:1:exon
so has part: feature:1857386-1857875:1:exon

XP_036687931.1
type: Protein
SIO_000068: ncbiprotein

position:1852530:1
position: 1852530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1852530-1852768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1857386-1857875:1:exon

LOC118884446
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1925666..2136269
location: region:1925666-2136269:1
so has part: feature:1925666-2136269:1:exon
subclass of: SO_0000011

118884446
type: Gene
SIO_000068: ncbigene

position:1925666:1
position: 1925666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2136269:1
position: 2136269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1925666-2136269:1:exon

LOC118884446
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884446
product: uncharacterized LOC118884446, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005017287.1
SIO_010081: LOC118884446
subclass of: SO_0000673
so part of: LOC118884446
location: join(1925666..1925762,1936775..1936896,1937456..1937565,1950781..1950874,1951106..1951260,1955407..1955514,1971810..1971963,2092697..2092781,2136215..2136269)
location: region:1925666-2136269:1
so has part: feature:1925666-1925762:1:exon
so has part: feature:1936775-1936896:1:exon
so has part: feature:1937456-1937565:1:exon
so has part: feature:1950781-1950874:1:exon
so has part: feature:1951106-1951260:1:exon
so has part: feature:1955407-1955514:1:exon
so has part: feature:1971810-1971963:1:exon
so has part: feature:2092697-2092781:1:exon
so has part: feature:2136215-2136269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1925666-1925762:1:exon

position:1925762:1
position: 1925762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1936775-1936896:1:exon

position:1936775:1
position: 1936775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1936896:1
position: 1936896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1937456-1937565:1:exon

position:1937456:1
position: 1937456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1937565:1
position: 1937565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1950781-1950874:1:exon

position:1950781:1
position: 1950781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1950874:1
position: 1950874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1951106-1951260:1:exon

position:1951106:1
position: 1951106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1951260:1
position: 1951260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1955407-1955514:1:exon

position:1955407:1
position: 1955407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1955514:1
position: 1955514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1971810-1971963:1:exon

position:1971810:1
position: 1971810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1971963:1
position: 1971963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2092697-2092781:1:exon

position:2092697:1
position: 2092697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092781:1
position: 2092781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2136215-2136269:1:exon

position:2136215:1
position: 2136215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118884446
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884446
product: uncharacterized LOC118884446, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005017288.1
SIO_010081: LOC118884446
subclass of: SO_0000673
so part of: LOC118884446
location: join(1925666..1925762,1936775..1936896,1937456..1937565,1950781..1950874,1951106..1951260,1955407..1955514,1971810..1971963,2136215..2136269)
location: region:1925666-2136269:1
so has part: feature:1925666-1925762:1:exon
so has part: feature:1936775-1936896:1:exon
so has part: feature:1937456-1937565:1:exon
so has part: feature:1950781-1950874:1:exon
so has part: feature:1951106-1951260:1:exon
so has part: feature:1955407-1955514:1:exon
so has part: feature:1971810-1971963:1:exon
so has part: feature:2136215-2136269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1925666-1925762:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1936775-1936896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1937456-1937565:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1950781-1950874:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1951106-1951260:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1955407-1955514:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1971810-1971963:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2136215-2136269:1:exon

LOC118884104
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884104
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2346236..2355196
location: region:2346236-2355196:1
so has part: feature:2346236-2355196:1:exon
subclass of: SO_0000011

118884104
type: Gene
SIO_000068: ncbigene

position:2346236:1
position: 2346236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2355196:1
position: 2355196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2346236-2355196:1:exon

LOC118884104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884104
product: uncharacterized LOC118884104, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005017186.1
SIO_010081: LOC118884104
subclass of: SO_0000673
so part of: LOC118884104
location: join(2346236..2346368,2352218..2352360,2355111..2355196)
location: region:2346236-2355196:1
so has part: feature:2346236-2346368:1:exon
so has part: feature:2352218-2352360:1:exon
so has part: feature:2355111-2355196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2346236-2346368:1:exon

position:2346368:1
position: 2346368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2352218-2352360:1:exon

position:2352218:1
position: 2352218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2352360:1
position: 2352360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2355111-2355196:1:exon

position:2355111:1
position: 2355111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118884104
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884104
product: uncharacterized LOC118884104, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005017187.1
SIO_010081: LOC118884104
subclass of: SO_0000673
so part of: LOC118884104
location: join(2346236..2346368,2352245..2352360,2355111..2355196)
location: region:2346236-2355196:1
so has part: feature:2346236-2346368:1:exon
so has part: feature:2352245-2352360:1:exon
so has part: feature:2355111-2355196:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2346236-2346368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2352245-2352360:1:exon

position:2352245:1
position: 2352245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2355111-2355196:1:exon

SGCG
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2491576..2541301
location: region:2491576-2541301:1
so has part: feature:2491576-2541301:1:exon
subclass of: SO_0000010

118884102
type: Gene
SIO_000068: ncbigene

position:2491576:1
position: 2491576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2541301:1
position: 2541301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2491576-2541301:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SGCG
product: sarcoglycan gamma, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036831465.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(2491576..2491596,2513232..2513426,2514057..2514158,2515686..2515773,2522599..2522718,2529007..2529079,2538036..2538159,2540500..2541301)
location: region:2491576-2541301:1
so has part: feature:2491576-2491596:1:exon
so has part: feature:2513232-2513426:1:exon
so has part: feature:2514057-2514158:1:exon
so has part: feature:2515686-2515773:1:exon
so has part: feature:2522599-2522718:1:exon
so has part: feature:2529007-2529079:1:exon
so has part: feature:2538036-2538159:1:exon
so has part: feature:2540500-2541301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2491576-2491596:1:exon

position:2491596:1
position: 2491596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2513232-2513426:1:exon

position:2513232:1
position: 2513232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2513426:1
position: 2513426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2514057-2514158:1:exon

position:2514057:1
position: 2514057
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2514158:1
position: 2514158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2515686-2515773:1:exon

position:2515686:1
position: 2515686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2515773:1
position: 2515773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2522599-2522718:1:exon

position:2522599:1
position: 2522599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2522718:1
position: 2522718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2529007-2529079:1:exon

position:2529007:1
position: 2529007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2529079:1
position: 2529079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2538036-2538159:1:exon

position:2538036:1
position: 2538036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2538159:1
position: 2538159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2540500-2541301:1:exon

position:2540500:1
position: 2540500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118884455
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884455
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 2493822..2493967
location: region:2493822-2493967:1
so has part: feature:2493822-2493967:1:exon

118884455
type: Gene
SIO_000068: ncbigene

position:2493822:1
position: 2493822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2493967:1
position: 2493967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2493822-2493967:1:exon

LOC118884455
type: Exon
subclass of: SO_0000147
RO_0002162: 9771
gene: LOC118884455
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118884455
subclass of: SO_0000673
so part of: LOC118884455
location: 2493822..2493967
location: region:2493822-2493967:1
so has part: feature:2493822-2493967:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2493822-2493967:1:exon

SGCG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SGCG
product: sarcoglycan gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036831464.1
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(2502679..2502851,2513232..2513426,2514057..2514158,2515686..2515773,2522599..2522718,2529007..2529079,2538036..2538159,2540500..2541301)
location: region:2502679-2541301:1
so has part: feature:2502679-2502851:1:exon
so has part: feature:2513232-2513426:1:exon
so has part: feature:2514057-2514158:1:exon
so has part: feature:2515686-2515773:1:exon
so has part: feature:2522599-2522718:1:exon
so has part: feature:2529007-2529079:1:exon
so has part: feature:2538036-2538159:1:exon
so has part: feature:2540500-2541301:1:exon

position:2502679:1
position: 2502679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2502679-2502851:1:exon

position:2502851:1
position: 2502851
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2513232-2513426:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2514057-2514158:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2515686-2515773:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2522599-2522718:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2529007-2529079:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2538036-2538159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2540500-2541301:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan
translation: MVREQYTTTPEGTHVERPENQSVYKIGIYGWRKRCLYLFVLLLLIVLLVNFALTIWILKVMWFSPTGMGHLYVTEDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNPEGEVTGRLKVGPNMVEVQSQQFQINSKDGKPLFTVDEKAVVVGTDKLRVTGPEGALFEHSVETPLIKPEPIQDLRLESPTRSLSMDAPKGIHIQAAAGKIEALSQMDIVLHSSDGTLVLDAETVCLPKLAQGTQGPASSLQGLYEICACPDGKLYLSVAGVGTTCHENSHICL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(2513232..2513426,2514057..2514158,2515686..2515773,2522599..2522718,2529007..2529079,2538036..2538159,2540500..2540673)
location: region:2513232-2540673:1
so has part: feature:2513232-2513426:1:exon
so has part: feature:2514057-2514158:1:exon
so has part: feature:2515686-2515773:1:exon
so has part: feature:2522599-2522718:1:exon
so has part: feature:2529007-2529079:1:exon
so has part: feature:2538036-2538159:1:exon
so has part: feature:2540500-2540673:1:exon

XP_036687359.1
type: Protein
SIO_000068: ncbiprotein

position:2540673:1
position: 2540673
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2513232-2513426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2514057-2514158:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2515686-2515773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2522599-2522718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2529007-2529079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538036-2538159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540500-2540673:1:exon

SGCG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SGCG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-sarcoglycan
translation: MVREQYTTTPEGTHVERPENQSVYKIGIYGWRKRCLYLFVLLLLIVLLVNFALTIWILKVMWFSPTGMGHLYVTEDGLRLEGESEFLFPLYAKEIHSRVDSSLLLQSTQNVTVNARNPEGEVTGRLKVGPNMVEVQSQQFQINSKDGKPLFTVDEKAVVVGTDKLRVTGPEGALFEHSVETPLIKPEPIQDLRLESPTRSLSMDAPKGIHIQAAAGKIEALSQMDIVLHSSDGTLVLDAETVCLPKLAQGTQGPASSLQGLYEICACPDGKLYLSVAGVGTTCHENSHICL
SIO_010081: SGCG
subclass of: SO_0000673
so part of: SGCG
location: join(2513232..2513426,2514057..2514158,2515686..2515773,2522599..2522718,2529007..2529079,2538036..2538159,2540500..2540673)
location: region:2513232-2540673:1
so has part: feature:2513232-2513426:1:exon
so has part: feature:2514057-2514158:1:exon
so has part: feature:2515686-2515773:1:exon
so has part: feature:2522599-2522718:1:exon
so has part: feature:2529007-2529079:1:exon
so has part: feature:2538036-2538159:1:exon
so has part: feature:2540500-2540673:1:exon

XP_036687360.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2513232-2513426:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2514057-2514158:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2515686-2515773:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2522599-2522718:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2529007-2529079:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2538036-2538159:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2540500-2540673:1:exon

SACS
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2542897..2622812)
location: region:2542897-2622812:-1
so has part: feature:2542897-2622812:-1:exon
subclass of: SO_0000010

118883981
type: Gene
SIO_000068: ncbigene

position:2542897:-1
position: 2542897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2622812:-1
position: 2622812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2542897-2622812:-1:exon

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SACS
product: sacsin molecular chaperone, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831183.1
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(2542897..2558352,2567354..2567445,2568063..2569554,2571615..2571761,2574915..2575026,2577495..2577580,2578477..2578564,2584497..2584647,2606385..2606909,2622738..2622812))
location: region:2542897-2622812:-1
so has part: feature:2622738-2622812:-1:exon
so has part: feature:2606385-2606909:-1:exon
so has part: feature:2584497-2584647:-1:exon
so has part: feature:2578477-2578564:-1:exon
so has part: feature:2577495-2577580:-1:exon
so has part: feature:2574915-2575026:-1:exon
so has part: feature:2571615-2571761:-1:exon
so has part: feature:2568063-2569554:-1:exon
so has part: feature:2567354-2567445:-1:exon
so has part: feature:2542897-2558352:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2622738-2622812:-1:exon

position:2622738:-1
position: 2622738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2606385-2606909:-1:exon

position:2606385:-1
position: 2606385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606909:-1
position: 2606909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2584497-2584647:-1:exon

position:2584497:-1
position: 2584497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2584647:-1
position: 2584647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2578477-2578564:-1:exon

position:2578477:-1
position: 2578477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2578564:-1
position: 2578564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2577495-2577580:-1:exon

position:2577495:-1
position: 2577495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2577580:-1
position: 2577580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2574915-2575026:-1:exon

position:2574915:-1
position: 2574915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2575026:-1
position: 2575026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2571615-2571761:-1:exon

position:2571615:-1
position: 2571615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2571761:-1
position: 2571761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2568063-2569554:-1:exon

position:2568063:-1
position: 2568063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2569554:-1
position: 2569554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2567354-2567445:-1:exon

position:2567354:-1
position: 2567354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567445:-1
position: 2567445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2542897-2558352:-1:exon

position:2558352:-1
position: 2558352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SACS
product: sacsin molecular chaperone, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036831182.1
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(2542897..2558352,2561991..2562017,2567354..2567445,2568063..2569554,2571615..2571761,2574915..2575026,2577495..2577580,2578477..2578564,2584497..2584647,2584714..2584824))
location: region:2542897-2584824:-1
so has part: feature:2584714-2584824:-1:exon
so has part: feature:2584497-2584647:-1:exon
so has part: feature:2578477-2578564:-1:exon
so has part: feature:2577495-2577580:-1:exon
so has part: feature:2574915-2575026:-1:exon
so has part: feature:2571615-2571761:-1:exon
so has part: feature:2568063-2569554:-1:exon
so has part: feature:2567354-2567445:-1:exon
so has part: feature:2561991-2562017:-1:exon
so has part: feature:2542897-2558352:-1:exon

position:2584824:-1
position: 2584824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2584714-2584824:-1:exon

position:2584714:-1
position: 2584714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2584497-2584647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578477-2578564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2577495-2577580:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2574915-2575026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2571615-2571761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2568063-2569554:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2567354-2567445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2561991-2562017:-1:exon

position:2561991:-1
position: 2561991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2562017:-1
position: 2562017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2542897-2558352:-1:exon

SACS
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SACS
product: sacsin molecular chaperone, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036831184.1
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(2542898..2558352,2567354..2567445,2567542..2567662))
location: region:2542898-2567662:-1
so has part: feature:2567542-2567662:-1:exon
so has part: feature:2567354-2567445:-1:exon
so has part: feature:2542898-2558352:-1:exon

position:2542898:-1
position: 2542898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2567662:-1
position: 2567662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2567542-2567662:-1:exon

position:2567542:-1
position: 2567542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2567354-2567445:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2542898-2558352:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X2
translation: METKDNRWLRVTVLPGCVGCRTMAVPASWTVRDVKRRLAAETGFPASEQRLWLGGRQLSDWIRIGDLTSQNCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAQYQGPALYVHNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELSDQFAPFIGIFGSTKETFINGSFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDISLLVREADGTEKLVFRVSASESAALTQERPDSIKILGAAIGNYCEKIPSNSITCVTYPINIVLEDESARGAQKTSWLVCNGVGGRGISSRLDALADELKFVPVIGIATLLSSRAEEEGGAASAFSGKAFCFLPLPPGEESKTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNEFLVLNVVPRAYATLILDCIERLQAGRNPDLPLSVDVIYKLWPDVKRVTAHWQPVLEPLFHELFQHAVLYSLSGHWVPLEQACFSELDESLDCTRSVLSYLQSSGKQVVRVPAHVAAAVQLAASGVRPVRKVTPAWTRQVLRKAAHLGGTSAAEKLQLLEFVLSDQAYGELLGLELLPLQNGSFVPFSSSVSDQDVVYISSESYPRFLFPGLEGRFILDNLKPHLLAALKEAAQTRGRPCTQLQLLNPERFARLIKEVVNTFWPGRELIVQWYPCDEDKKHPSISWLKMVWKNLYIHFSEDLTLFDEMPLIPRTAVEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGIILKQLDASIQHPLIKKYIHSPSPSAVLQMMEKMPLQKLCNQVASLLPTHKDALRKFLANLTDSSEKEKRVIQELPIFKRINHSSSQGISSYTRLKGCRVLHHTSRLPAGLRLSISVVDSSDEATIRLANLLKVEKVKTTSCLKLILKDIENAFYSHEEMTHLMLWVLENLSSLKNENPNVLDWLMPLKFMHISQERLVSASELFDPDVEVLKDLFYDEEETCFPPSAFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQASSCPNQDILLKKARTLLLVLNKNHALLQSSEGKMALKKIKWAPACKQRPPNYPGSLVWKGDLWDLCAPADMCDAAHAILVGSSLPLVESVHVNLEEALGIFTKPDINAVLKHFKIVVDWYTSNTFSDEDYYQFQHILLEIYGFMHDHLNEGKDAFRALKFPWVWTGKKFCPLAQAVIKPFYDLDLQPYLHSVPKTMAKFHQLFKACGSVEELMPDHISMVIQKVYLKSGQDLSDQESKQNLHLMLNIIRWLYSNQIPVSLNTPVPIHHSRDPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRAEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYSGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVTSMYLKYLKIEETNPSLAQDTIVIKKKLCSSKALIAPVISVLKEAAKLMKTCDSSNKKLPADAPKSACILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELPQKTMECTTWLICTCMDTGEALRFSLSESGRRLGVVPCGAVGVFLAEIQDQKWAVRPQAGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVVVKAYLEALSILRDLATSGELMDYTYHAVWPDPDLVHDDFSAICQGFYEDVAHGKGKELTRVFSDGSTWVSMKNVRFLDDCIL…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(2546795..2558352,2567354..2567445,2568063..2569554,2571615..2571761,2574915..2575026,2577495..2577580,2578477..2578564,2584497..2584647,2606385..2606404))
location: region:2546795-2606404:-1
so has part: feature:2606385-2606404:-1:exon
so has part: feature:2584497-2584647:-1:exon
so has part: feature:2578477-2578564:-1:exon
so has part: feature:2577495-2577580:-1:exon
so has part: feature:2574915-2575026:-1:exon
so has part: feature:2571615-2571761:-1:exon
so has part: feature:2568063-2569554:-1:exon
so has part: feature:2567354-2567445:-1:exon
so has part: feature:2546795-2558352:-1:exon

XP_036687078.1
type: Protein
SIO_000068: ncbiprotein

position:2546795:-1
position: 2546795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2606404:-1
position: 2606404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2606385-2606404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2584497-2584647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578477-2578564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2577495-2577580:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2574915-2575026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2571615-2571761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2568063-2569554:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2567354-2567445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2546795-2558352:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X1
translation: MGDRWLRVTVLPGCVGCRTMAVPASWTVRDVKRRLAAETGFPASEQRLWLGGRQLSDWIRIGDLTSQNCHLFVNLQSKGLKGGGRFGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAQYQGPALYVHNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFGPHESGQCWNLKDDSKEISELSDQFAPFIGIFGSTKETFINGSFPGTFFRFPLRLQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDISLLVREADGTEKLVFRVSASESAALTQERPDSIKILGAAIGNYCEKIPSNSITCVTYPINIVLEDESARGAQKTSWLVCNGVGGRGISSRLDALADELKFVPVIGIATLLSSRAEEEGGAASAFSGKAFCFLPLPPGEESKTGLPVHISGFFGLTDNRRSIKWRELDQWRDPAALWNEFLVLNVVPRAYATLILDCIERLQAGRNPDLPLSVDVIYKLWPDVKRVTAHWQPVLEPLFHELFQHAVLYSLSGHWVPLEQACFSELDESLDCTRSVLSYLQSSGKQVVRVPAHVAAAVQLAASGVRPVRKVTPAWTRQVLRKAAHLGGTSAAEKLQLLEFVLSDQAYGELLGLELLPLQNGSFVPFSSSVSDQDVVYISSESYPRFLFPGLEGRFILDNLKPHLLAALKEAAQTRAQQLLWGYSGRPCTQLQLLNPERFARLIKEVVNTFWPGRELIVQWYPCDEDKKHPSISWLKMVWKNLYIHFSEDLTLFDEMPLIPRTAVEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGIILKQLDASIQHPLIKKYIHSPSPSAVLQMMEKMPLQKLCNQVASLLPTHKDALRKFLANLTDSSEKEKRVIQELPIFKRINHSSSQGISSYTRLKGCRVLHHTSRLPAGLRLSISVVDSSDEATIRLANLLKVEKVKTTSCLKLILKDIENAFYSHEEMTHLMLWVLENLSSLKNENPNVLDWLMPLKFMHISQERLVSASELFDPDVEVLKDLFYDEEETCFPPSAFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQASSCPNQDILLKKARTLLLVLNKNHALLQSSEGKMALKKIKWAPACKQRPPNYPGSLVWKGDLWDLCAPADMCDAAHAILVGSSLPLVESVHVNLEEALGIFTKPDINAVLKHFKIVVDWYTSNTFSDEDYYQFQHILLEIYGFMHDHLNEGKDAFRALKFPWVWTGKKFCPLAQAVIKPFYDLDLQPYLHSVPKTMAKFHQLFKACGSVEELMPDHISMVIQKVYLKSGQDLSDQESKQNLHLMLNIIRWLYSNQIPVSLNTPVPIHHSRDPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRAEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYSGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVTSMYLKYLKIEETNPSLAQDTIVIKKKLCSSKALIAPVISVLKEAAKLMKTCDSSNKKLPADAPKSACILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELPQKTMECTTWLICTCMDTGEALRFSLSESGRRLGVVPCGAVGVFLAEIQDQKWAVRPQAGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVVVKAYLEALSILRDLATSGELMDYTYHAVWPDPDLVHDDFSAICQGFYEDVAHGKGKELTRVFSDGSTWVSMKNVRF…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(join(2546795..2558352,2561991..2562017,2567354..2567445,2568063..2569554,2571615..2571761,2574915..2575026,2577495..2577580,2578477..2578564,2584497..2584647,2584714..2584724))
location: region:2546795-2584724:-1
so has part: feature:2584714-2584724:-1:exon
so has part: feature:2584497-2584647:-1:exon
so has part: feature:2578477-2578564:-1:exon
so has part: feature:2577495-2577580:-1:exon
so has part: feature:2574915-2575026:-1:exon
so has part: feature:2571615-2571761:-1:exon
so has part: feature:2568063-2569554:-1:exon
so has part: feature:2567354-2567445:-1:exon
so has part: feature:2561991-2562017:-1:exon
so has part: feature:2546795-2558352:-1:exon

XP_036687077.1
type: Protein
SIO_000068: ncbiprotein

position:2584724:-1
position: 2584724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2584714-2584724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2584497-2584647:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2578477-2578564:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2577495-2577580:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2574915-2575026:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2571615-2571761:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2568063-2569554:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2567354-2567445:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2561991-2562017:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2546795-2558352:-1:exon

SACS
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SACS
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sacsin isoform X3
translation: MVWKNLYIHFSEDLTLFDEMPLIPRTAVEEGQTCVELIRLRIPSLVILDDESEAQLPEFLADIVQKLGGIILKQLDASIQHPLIKKYIHSPSPSAVLQMMEKMPLQKLCNQVASLLPTHKDALRKFLANLTDSSEKEKRVIQELPIFKRINHSSSQGISSYTRLKGCRVLHHTSRLPAGLRLSISVVDSSDEATIRLANLLKVEKVKTTSCLKLILKDIENAFYSHEEMTHLMLWVLENLSSLKNENPNVLDWLMPLKFMHISQERLVSASELFDPDVEVLKDLFYDEEETCFPPSAFTSPDILHSLRQIGLKNEASLKEKDVVQVAKKIEALQASSCPNQDILLKKARTLLLVLNKNHALLQSSEGKMALKKIKWAPACKQRPPNYPGSLVWKGDLWDLCAPADMCDAAHAILVGSSLPLVESVHVNLEEALGIFTKPDINAVLKHFKIVVDWYTSNTFSDEDYYQFQHILLEIYGFMHDHLNEGKDAFRALKFPWVWTGKKFCPLAQAVIKPFYDLDLQPYLHSVPKTMAKFHQLFKACGSVEELMPDHISMVIQKVYLKSGQDLSDQESKQNLHLMLNIIRWLYSNQIPVSLNTPVPIHHSRDPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFMIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRAEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDRSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYSGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVTSMYLKYLKIEETNPSLAQDTIVIKKKLCSSKALIAPVISVLKEAAKLMKTCDSSNKKLPADAPKSACILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELPQKTMECTTWLICTCMDTGEALRFSLSESGRRLGVVPCGAVGVFLAEIQDQKWAVRPQAGEVFCYLPLRIKTGLPVHINGCFAVTSNRKEIWKTDTKGRWNTTFMRHVVVKAYLEALSILRDLATSGELMDYTYHAVWPDPDLVHDDFSAICQGFYEDVAHGKGKELTRVFSDGSTWVSMKNVRFLDDCILKRRDVGPAAFKIFLKYLKKTGSKNLCAVELPSSVKLGFEEAGCKQILLENTFSEKQFFSEVFFPNIQEIEAELRDPLMNFVLNEKVDEFSGILRVTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDTKDGRFPYGSTQDYLNPIILIKLVQLGMAKDDILWDDMLERAESVAEINKSDHGAACLRSSILLSLIDEKLKIRDPRAKDFAAKYQTIPFLPFLTKPAGFSLDWKGNSFKPETMFAATDLYTAEYQDIVCLLQPVLNENSHSFRGCGSVPLAVKEFLGLLRKPTVDLVVNQLKEVAKSVDDGITLYQENITNACYKYLHEAMMQSDITKISIIEKLKTFSFILVESAYVDSEKIAFHLNFEAAPYLYQLPNKYKNNFRELFESVGVRQSFTVEDFALVLESIAQEKETKQITEGNFQLCRRIISEGIWSLIREKKQEFCEKNYGQILLPDTNLKLLPAKSLCYNDCPWIKVKDSTVKYCHADIPREVAVKLGAVPKRHKALERYASNICFTTLGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPREHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPCKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGATSVSPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPSSDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKATGALNVLYSVKGNITDGDRLKRKQF…
SIO_010081: SACS
subclass of: SO_0000673
so part of: SACS
location: complement(2546795..2558197)
location: region:2546795-2558197:-1
so has part: feature:2546795-2558197:-1:exon

XP_036687079.1
type: Protein
SIO_000068: ncbiprotein

position:2558197:-1
position: 2558197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2546795-2558197:-1:exon

LOC118883982
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118883982
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2585210..2601756
location: region:2585210-2601756:1
so has part: feature:2585210-2601756:1:exon
subclass of: SO_0000011

118883982
type: Gene
SIO_000068: ncbigene

position:2585210:1
position: 2585210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2601756:1
position: 2601756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2585210-2601756:1:exon

LOC118883982
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118883982
product: uncharacterized LOC118883982
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005017156.1
SIO_010081: LOC118883982
subclass of: SO_0000673
so part of: LOC118883982
location: join(2585210..2585883,2590010..2590180,2595208..2595270,2598874..2598958,2600572..2601756)
location: region:2585210-2601756:1
so has part: feature:2585210-2585883:1:exon
so has part: feature:2590010-2590180:1:exon
so has part: feature:2595208-2595270:1:exon
so has part: feature:2598874-2598958:1:exon
so has part: feature:2600572-2601756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2585210-2585883:1:exon

position:2585883:1
position: 2585883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2590010-2590180:1:exon

position:2590010:1
position: 2590010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2590180:1
position: 2590180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2595208-2595270:1:exon

position:2595208:1
position: 2595208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2595270:1
position: 2595270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2598874-2598958:1:exon

position:2598874:1
position: 2598874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2598958:1
position: 2598958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2600572-2601756:1:exon

position:2600572:1
position: 2600572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF19
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2713483..2804520
location: region:2713483-2804520:1
so has part: feature:2713483-2804520:1:exon
subclass of: SO_0000010

118884231
type: Gene
SIO_000068: ncbigene

position:2713483:1
position: 2713483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2804520:1
position: 2804520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713483-2804520:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831730.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2713483..2714131,2731927..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796379..2796500)
location: region:2713483-2796500:1
so has part: feature:2713483-2714131:1:exon
so has part: feature:2731927-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796379-2796500:1:exon

position:2796500:1
position: 2796500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713483-2714131:1:exon

position:2714131:1
position: 2714131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2731927-2732029:1:exon

position:2731927:1
position: 2731927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2732029:1
position: 2732029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2734433-2734543:1:exon

position:2734433:1
position: 2734433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2734543:1
position: 2734543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2747650-2747828:1:exon

position:2747650:1
position: 2747650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2747828:1
position: 2747828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2757974-2758059:1:exon

position:2757974:1
position: 2757974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2758059:1
position: 2758059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2791717-2791881:1:exon

position:2791717:1
position: 2791717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2791881:1
position: 2791881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2792366-2792491:1:exon

position:2792366:1
position: 2792366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2792491:1
position: 2792491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2795743-2795863:1:exon

position:2795743:1
position: 2795743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2795863:1
position: 2795863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2796379-2796500:1:exon

position:2796379:1
position: 2796379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831729.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2713489..2714131,2731927..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791848,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2804520)
location: region:2713489-2804520:1
so has part: feature:2713489-2714131:1:exon
so has part: feature:2731927-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791848:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2804520:1:exon

position:2713489:1
position: 2713489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713489-2714131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2731927-2732029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791717-2791848:1:exon

position:2791848:1
position: 2791848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2796466-2796871:1:exon

position:2796466:1
position: 2796466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2796871:1
position: 2796871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2801375-2804520:1:exon

position:2801375:1
position: 2801375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831724.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2713490..2714131,2731927..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2804520)
location: region:2713490-2804520:1
so has part: feature:2713490-2714131:1:exon
so has part: feature:2731927-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2804520:1:exon

position:2713490:1
position: 2713490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713490-2714131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2731927-2732029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801375-2804520:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_036831728.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2713492..2714131,2731927..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795761..2795863,2796466..2796871,2801375..2804520)
location: region:2713492-2804520:1
so has part: feature:2713492-2714131:1:exon
so has part: feature:2731927-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795761-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2804520:1:exon

position:2713492:1
position: 2713492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2713492-2714131:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2731927-2732029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2795761-2795863:1:exon

position:2795761:1
position: 2795761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801375-2804520:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831727.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2720195..2720371,2731927..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2804520)
location: region:2720195-2804520:1
so has part: feature:2720195-2720371:1:exon
so has part: feature:2731927-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2804520:1:exon

position:2720195:1
position: 2720195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2720195-2720371:1:exon

position:2720371:1
position: 2720371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2731927-2732029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801375-2804520:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831726.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2720558..2720810,2731927..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2804520)
location: region:2720558-2804520:1
so has part: feature:2720558-2720810:1:exon
so has part: feature:2731927-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2804520:1:exon

position:2720558:1
position: 2720558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2720558-2720810:1:exon

position:2720810:1
position: 2720810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2731927-2732029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801375-2804520:1:exon

TNFRSF19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: TNFRSF19
product: TNF receptor superfamily member 19, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036831725.1
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2721978..2722140,2731927..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2804520)
location: region:2721978-2804520:1
so has part: feature:2721978-2722140:1:exon
so has part: feature:2731927-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2804520:1:exon

position:2721978:1
position: 2721978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2721978-2722140:1:exon

position:2722140:1
position: 2722140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2731927-2732029:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2801375-2804520:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19 isoform X1
translation: MRAMAFKVLLEQQKAFFTAVVLLACLACRVICETGDCGQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVRCRPHRFKEDWGFQKCKPCLDCALLSRFQKANCSATRDATCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVRIPSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRAQDLQYNGSELSCFDRPRLSTAAPHACCQCHRDSAQTCALPAFLGPVHLVPSACCDGACSVGRETPACRVHSKAILQDRNTGPAGEAMPTFFGSLSRSICGEFSDAWPLMQNPSCGDDTSSCDSYPELPGEDVRSLSPESASSASLDSNTSRGVVGGAVPIQAHPENLTETTDLSRLDNSVPEPALTQDALTARNQLDQERGDVHHLTTQPSPQEAERTCFFLQ
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2731952..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2801407)
location: region:2731952-2801407:1
so has part: feature:2731952-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2801407:1:exon

XP_036687619.1
type: Protein
SIO_000068: ncbiprotein

position:2731952:1
position: 2731952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2801407:1
position: 2801407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2731952-2732029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2801375-2801407:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19 isoform X1
translation: MRAMAFKVLLEQQKAFFTAVVLLACLACRVICETGDCGQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVRCRPHRFKEDWGFQKCKPCLDCALLSRFQKANCSATRDATCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVRIPSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRAQDLQYNGSELSCFDRPRLSTAAPHACCQCHRDSAQTCALPAFLGPVHLVPSACCDGACSVGRETPACRVHSKAILQDRNTGPAGEAMPTFFGSLSRSICGEFSDAWPLMQNPSCGDDTSSCDSYPELPGEDVRSLSPESASSASLDSNTSRGVVGGAVPIQAHPENLTETTDLSRLDNSVPEPALTQDALTARNQLDQERGDVHHLTTQPSPQEAERTCFFLQ
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2731952..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2801407)
location: region:2731952-2801407:1
so has part: feature:2731952-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2801407:1:exon

XP_036687620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2731952-2732029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2801375-2801407:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19 isoform X1
translation: MRAMAFKVLLEQQKAFFTAVVLLACLACRVICETGDCGQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVRCRPHRFKEDWGFQKCKPCLDCALLSRFQKANCSATRDATCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVRIPSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRAQDLQYNGSELSCFDRPRLSTAAPHACCQCHRDSAQTCALPAFLGPVHLVPSACCDGACSVGRETPACRVHSKAILQDRNTGPAGEAMPTFFGSLSRSICGEFSDAWPLMQNPSCGDDTSSCDSYPELPGEDVRSLSPESASSASLDSNTSRGVVGGAVPIQAHPENLTETTDLSRLDNSVPEPALTQDALTARNQLDQERGDVHHLTTQPSPQEAERTCFFLQ
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2731952..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2801407)
location: region:2731952-2801407:1
so has part: feature:2731952-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2801407:1:exon

XP_036687621.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2731952-2732029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2801375-2801407:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19 isoform X1
translation: MRAMAFKVLLEQQKAFFTAVVLLACLACRVICETGDCGQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVRCRPHRFKEDWGFQKCKPCLDCALLSRFQKANCSATRDATCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVRIPSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRAQDLQYNGSELSCFDRPRLSTAAPHACCQCHRDSAQTCALPAFLGPVHLVPSACCDGACSVGRETPACRVHSKAILQDRNTGPAGEAMPTFFGSLSRSICGEFSDAWPLMQNPSCGDDTSSCDSYPELPGEDVRSLSPESASSASLDSNTSRGVVGGAVPIQAHPENLTETTDLSRLDNSVPEPALTQDALTARNQLDQERGDVHHLTTQPSPQEAERTCFFLQ
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2731952..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2801407)
location: region:2731952-2801407:1
so has part: feature:2731952-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2801407:1:exon

XP_036687622.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2731952-2732029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2801375-2801407:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19 isoform X2
translation: MRAMAFKVLLEQQKAFFTAVVLLACLACRVICETGDCGQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVRCRPHRFKEDWGFQKCKPCLDCALLSRFQKANCSATRDATCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVRIPSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRAQDLQYNGSELSCFDRPRLSTAAPHACCQCHRDSAQTCGPVHLVPSACCDGACSVGRETPACRVHSKAILQDRNTGPAGEAMPTFFGSLSRSICGEFSDAWPLMQNPSCGDDTSSCDSYPELPGEDVRSLSPESASSASLDSNTSRGVVGGAVPIQAHPENLTETTDLSRLDNSVPEPALTQDALTARNQLDQERGDVHHLTTQPSPQEAERTCFFLQ
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2731952..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795761..2795863,2796466..2796871,2801375..2801407)
location: region:2731952-2801407:1
so has part: feature:2731952-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795761-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2801407:1:exon

XP_036687623.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2731952-2732029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795761-2795863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2801375-2801407:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19 isoform X3
translation: MRAMAFKVLLEQQKAFFTAVVLLACLACRVICETGDCGQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVRCRPHRFKEDWGFQKCKPCLDCALLSRFQKANCSATRDATCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVRIPSTASSPRDTALAAVICSALATVLLALLILCVIYWSLRAQDLQYNGSELSCFDRPRLSTAAPHACCQCHRDSAQTCALPAFLGPVHLVPSACCDGACSVGRETPACRVHSKAILQDRNTGPAGEAMPTFFGSLSRSICGEFSDAWPLMQNPSCGDDTSSCDSYPELPGEDVRSLSPESASSASLDSNTSRGVVGGAVPIQAHPENLTETTDLSRLDNSVPEPALTQDALTARNQLDQERGDVHHLTTQPSPQEAERTCFFLQ
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2731952..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791848,2792366..2792491,2795743..2795863,2796466..2796871,2801375..2801407)
location: region:2731952-2801407:1
so has part: feature:2731952-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791848:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796466-2796871:1:exon
so has part: feature:2801375-2801407:1:exon

XP_036687624.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2731952-2732029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791717-2791848:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2796466-2796871:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2801375-2801407:1:exon

TNFRSF19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: TNFRSF19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tumor necrosis factor receptor superfamily member 19 isoform X4
translation: MRAMAFKVLLEQQKAFFTAVVLLACLACRVICETGDCGQQEFRDRSGNCVLCKQCGPGMELSKECGFGYGEDAQCVRCRPHRFKEDWGFQKCKPCLDCALLSRFQKANCSATRDATCGDCLPGFYRKTKLVGFQDMECVPCGDPPPPYEPHCTSKVNLVRIPSTASSPRDTALAAVICSALATVLLALLILCVIYCKRQFMEKKPSWSLRAQDLQYNGSELSCFDRPRLSTAAPHACCQCHRDSAQTCALPAFLGPVHLVPSACCDGACSVGRETPACRVHSKAILQDRKLKSIAGMLLCSRFFSQ
SIO_010081: TNFRSF19
subclass of: SO_0000673
so part of: TNFRSF19
location: join(2731952..2732029,2734433..2734543,2747650..2747828,2757974..2758059,2791717..2791881,2792366..2792491,2795743..2795863,2796379..2796433)
location: region:2731952-2796433:1
so has part: feature:2731952-2732029:1:exon
so has part: feature:2734433-2734543:1:exon
so has part: feature:2747650-2747828:1:exon
so has part: feature:2757974-2758059:1:exon
so has part: feature:2791717-2791881:1:exon
so has part: feature:2792366-2792491:1:exon
so has part: feature:2795743-2795863:1:exon
so has part: feature:2796379-2796433:1:exon

XP_036687625.1
type: Protein
SIO_000068: ncbiprotein

position:2796433:1
position: 2796433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2731952-2732029:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2734433-2734543:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2747650-2747828:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2757974-2758059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2791717-2791881:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2792366-2792491:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2795743-2795863:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2796379-2796433:1:exon

LOC118884252
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2852156..2993068)
location: region:2852156-2993068:-1
so has part: feature:2852156-2993068:-1:exon
subclass of: SO_0000010

118884252
type: Gene
SIO_000068: ncbigene

position:2852156:-1
position: 2852156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2993068:-1
position: 2993068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2852156-2993068:-1:exon

LOC118884252
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LOC118884252
product: mitochondrial intermediate peptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036831773.1
SIO_010081: LOC118884252
subclass of: SO_0000673
so part of: LOC118884252
location: complement(join(2852156..2852414,2877292..2877365,2879149..2879270,2910960..2911079,2913924..2913998,2941034..2941143,2942652..2942856,2944685..2944762,2946295..2946448,2962423..2962475,2966316..2966376,2967812..2967860,2971985..2972141,2972682..2972864,2976855..2976918,2983923..2984009,2986421..2986509,2989492..2989665,2992508..2993068))
location: region:2852156-2993068:-1
so has part: feature:2992508-2993068:-1:exon
so has part: feature:2989492-2989665:-1:exon
so has part: feature:2986421-2986509:-1:exon
so has part: feature:2983923-2984009:-1:exon
so has part: feature:2976855-2976918:-1:exon
so has part: feature:2972682-2972864:-1:exon
so has part: feature:2971985-2972141:-1:exon
so has part: feature:2967812-2967860:-1:exon
so has part: feature:2966316-2966376:-1:exon
so has part: feature:2962423-2962475:-1:exon
so has part: feature:2946295-2946448:-1:exon
so has part: feature:2944685-2944762:-1:exon
so has part: feature:2942652-2942856:-1:exon
so has part: feature:2941034-2941143:-1:exon
so has part: feature:2913924-2913998:-1:exon
so has part: feature:2910960-2911079:-1:exon
so has part: feature:2879149-2879270:-1:exon
so has part: feature:2877292-2877365:-1:exon
so has part: feature:2852156-2852414:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2992508-2993068:-1:exon

position:2992508:-1
position: 2992508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2989492-2989665:-1:exon

position:2989492:-1
position: 2989492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2989665:-1
position: 2989665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2986421-2986509:-1:exon

position:2986421:-1
position: 2986421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2986509:-1
position: 2986509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2983923-2984009:-1:exon

position:2983923:-1
position: 2983923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2984009:-1
position: 2984009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2976855-2976918:-1:exon

position:2976855:-1
position: 2976855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2976918:-1
position: 2976918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2972682-2972864:-1:exon

position:2972682:-1
position: 2972682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2972864:-1
position: 2972864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2971985-2972141:-1:exon

position:2971985:-1
position: 2971985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2972141:-1
position: 2972141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2967812-2967860:-1:exon

position:2967812:-1
position: 2967812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2967860:-1
position: 2967860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2966316-2966376:-1:exon

position:2966316:-1
position: 2966316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2966376:-1
position: 2966376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2962423-2962475:-1:exon

position:2962423:-1
position: 2962423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2962475:-1
position: 2962475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2946295-2946448:-1:exon

position:2946295:-1
position: 2946295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2946448:-1
position: 2946448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2944685-2944762:-1:exon

position:2944685:-1
position: 2944685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2944762:-1
position: 2944762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2942652-2942856:-1:exon

position:2942652:-1
position: 2942652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2942856:-1
position: 2942856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2941034-2941143:-1:exon

position:2941034:-1
position: 2941034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2941143:-1
position: 2941143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2913924-2913998:-1:exon

position:2913924:-1
position: 2913924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2913998:-1
position: 2913998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2910960-2911079:-1:exon

position:2910960:-1
position: 2910960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2911079:-1
position: 2911079
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2879149-2879270:-1:exon

position:2879149:-1
position: 2879149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2879270:-1
position: 2879270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2877292-2877365:-1:exon

position:2877292:-1
position: 2877292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2877365:-1
position: 2877365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2852156-2852414:-1:exon

position:2852414:-1
position: 2852414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118884252
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LOC118884252
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mitochondrial intermediate peptidase
translation: MLCARRLGGFGAGLRVRWVSTSWSPVGAAFNVQPQGRRLDLFGERRGLFGVPELSAPEGFRVAQEKALRKTEQLVGRVCSAPPGPQTVLIFDELSDSLCRVADLADFVKIAHPEAAFREAAEEACRSIGAMVETLNTNVELYQSLQKLLADKKLVDSLDPETRRVAELFMFDFEISGIHLDREKRKRAVDLNVKILDLSSAFLMGTHLPSRIEKHLLPEHIRHHFELAGDHVLVDGLRAEVPDDLVREAAYKIFLYPNAGQLKCLEELLSNRDLLAKLVGYSTYSHRALQGTMAKNPETVMQFLEKLSDKLSERTIKDFEMIRGMKMKLNPQNSELMPWDPPYYSGVLRAERYNSEPSLYCPFFSLGACMEGLNILFNRLFGISLYVEQPAKGEVWCEDVRKLAVVHESEGLLGYIYCDFFQRADKPHQDCHFTIRGGRLKEDGDYQLPIVVLMLNLPHPSKNLPTLLTPGMMENLFHEMGHAMHSMLGRTRYQHVTGTRCPTDFAEVPSILMEYFANDYRVVHQFARHYQTGQSLPRNMVSRLCESKKVCAAADVQLQVFYAALDQIYHGKHPLRSSTTDILRDTQEKFYGLPYVPNTAWQLRFSHLVGYGAKYYSYLVSRAVASMVWRECFLRDPFNRAAGERYRREMLAHGGGKEPLLMVQGVLQKCPSIDDFVNALVSDLDMDLETFLTDSK
SIO_010081: LOC118884252
subclass of: SO_0000673
so part of: LOC118884252
location: complement(join(2852317..2852414,2877292..2877365,2879149..2879270,2910960..2911079,2913924..2913998,2941034..2941143,2942652..2942856,2944685..2944762,2946295..2946448,2962423..2962475,2966316..2966376,2967812..2967860,2971985..2972141,2972682..2972864,2976855..2976918,2983923..2984009,2986421..2986509,2989492..2989665,2992508..2992645))
location: region:2852317-2992645:-1
so has part: feature:2992508-2992645:-1:exon
so has part: feature:2989492-2989665:-1:exon
so has part: feature:2986421-2986509:-1:exon
so has part: feature:2983923-2984009:-1:exon
so has part: feature:2976855-2976918:-1:exon
so has part: feature:2972682-2972864:-1:exon
so has part: feature:2971985-2972141:-1:exon
so has part: feature:2967812-2967860:-1:exon
so has part: feature:2966316-2966376:-1:exon
so has part: feature:2962423-2962475:-1:exon
so has part: feature:2946295-2946448:-1:exon
so has part: feature:2944685-2944762:-1:exon
so has part: feature:2942652-2942856:-1:exon
so has part: feature:2941034-2941143:-1:exon
so has part: feature:2913924-2913998:-1:exon
so has part: feature:2910960-2911079:-1:exon
so has part: feature:2879149-2879270:-1:exon
so has part: feature:2877292-2877365:-1:exon
so has part: feature:2852317-2852414:-1:exon

XP_036687668.1
type: Protein
SIO_000068: ncbiprotein

position:2852317:-1
position: 2852317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2992645:-1
position: 2992645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2992508-2992645:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2989492-2989665:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2986421-2986509:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2983923-2984009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2976855-2976918:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2972682-2972864:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2971985-2972141:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2967812-2967860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2966316-2966376:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2962423-2962475:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2946295-2946448:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2944685-2944762:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2942652-2942856:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2941034-2941143:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2913924-2913998:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2910960-2911079:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2879149-2879270:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2877292-2877365:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2852317-2852414:-1:exon

C1QTNF9
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: C1QTNF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2995622..3014836)
location: region:2995622-3014836:-1
so has part: feature:2995622-3014836:-1:exon
subclass of: SO_0000010

118884015
type: Gene
SIO_000068: ncbigene

position:2995622:-1
position: 2995622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3014836:-1
position: 3014836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2995622-3014836:-1:exon

C1QTNF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: C1QTNF9
product: C1q and TNF related 9, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036831303.1
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995622..2996596,2998048..2998110,3001960..3002141,3014762..3014836))
location: region:2995622-3014836:-1
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3001960-3002141:-1:exon
so has part: feature:2998048-2998110:-1:exon
so has part: feature:2995622-2996596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3014762-3014836:-1:exon

position:3014762:-1
position: 3014762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3001960-3002141:-1:exon

position:3001960:-1
position: 3001960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002141:-1
position: 3002141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2998048-2998110:-1:exon

position:2998048:-1
position: 2998048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2998110:-1
position: 2998110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2995622-2996596:-1:exon

position:2996596:-1
position: 2996596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C1QTNF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: C1QTNF9
product: C1q and TNF related 9, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831305.1
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995622..2996596,3001960..3002141,3006092..3006122))
location: region:2995622-3006122:-1
so has part: feature:3006092-3006122:-1:exon
so has part: feature:3001960-3002141:-1:exon
so has part: feature:2995622-2996596:-1:exon

position:3006122:-1
position: 3006122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3006092-3006122:-1:exon

position:3006092:-1
position: 3006092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3001960-3002141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2995622-2996596:-1:exon

C1QTNF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: C1QTNF9
product: C1q and TNF related 9, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831301.1
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995622..2996596,2998048..2998110,3001960..3002141,3006092..3006122))
location: region:2995622-3006122:-1
so has part: feature:3006092-3006122:-1:exon
so has part: feature:3001960-3002141:-1:exon
so has part: feature:2998048-2998110:-1:exon
so has part: feature:2995622-2996596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3006092-3006122:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3001960-3002141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2998048-2998110:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2995622-2996596:-1:exon

C1QTNF9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: C1QTNF9
product: C1q and TNF related 9, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831302.1
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995622..2996596,2998048..2998110,3001960..3002141,3002871..3002922))
location: region:2995622-3002922:-1
so has part: feature:3002871-3002922:-1:exon
so has part: feature:3001960-3002141:-1:exon
so has part: feature:2998048-2998110:-1:exon
so has part: feature:2995622-2996596:-1:exon

position:3002922:-1
position: 3002922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3002871-3002922:-1:exon

position:3002871:-1
position: 3002871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3001960-3002141:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2998048-2998110:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2995622-2996596:-1:exon

C1QTNF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: C1QTNF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9A isoform X2
translation: MRIWWLLFVSGVCAGMVNSQDTCGQGHPGVPGNPGHSGLPGRGGRDGAKGDKGDAGADGNVEAKGVKGDQGSRGPPGKHGPQGLVGPMGEKGLRGETGAQGQKGEKGDVGPVGPEGPKGSTGPSGPTGLPGPVGPTGKPGPRGDAGPLGPQGEPGARGMRGWKGDRGEKGKTGETPVLPKSAFTVGLTVLSKFPPSDAPVKFDRILYNEFGHYDVATGKFTCHVAGVYYFTYHVTVFSRNVQVSLVKNGVKVLHTKDGYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGLLLFCSA
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995824..2996596,3001960..3002125))
location: region:2995824-3002125:-1
so has part: feature:3001960-3002125:-1:exon
so has part: feature:2995824-2996596:-1:exon

XP_036687200.1
type: Protein
SIO_000068: ncbiprotein

position:2995824:-1
position: 2995824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3002125:-1
position: 3002125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3001960-3002125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2995824-2996596:-1:exon

C1QTNF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: C1QTNF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9A isoform X1
translation: MRIWWLLFVSGVCAGMVNSQDTCGQGHPGVPGNPGHSGLPGRGGRDGAKGDKGDAGEPGHPGGPGKDGMTGEKGEPGADGNVEAKGVKGDQGSRGPPGKHGPQGLVGPMGEKGLRGETGAQGQKGEKGDVGPVGPEGPKGSTGPSGPTGLPGPVGPTGKPGPRGDAGPLGPQGEPGARGMRGWKGDRGEKGKTGETPVLPKSAFTVGLTVLSKFPPSDAPVKFDRILYNEFGHYDVATGKFTCHVAGVYYFTYHVTVFSRNVQVSLVKNGVKVLHTKDGYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGLLLFCSA
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995824..2996596,2998048..2998110,3001960..3002125))
location: region:2995824-3002125:-1
so has part: feature:3001960-3002125:-1:exon
so has part: feature:2998048-2998110:-1:exon
so has part: feature:2995824-2996596:-1:exon

XP_036687196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3001960-3002125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998048-2998110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2995824-2996596:-1:exon

C1QTNF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: C1QTNF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9A isoform X1
translation: MRIWWLLFVSGVCAGMVNSQDTCGQGHPGVPGNPGHSGLPGRGGRDGAKGDKGDAGEPGHPGGPGKDGMTGEKGEPGADGNVEAKGVKGDQGSRGPPGKHGPQGLVGPMGEKGLRGETGAQGQKGEKGDVGPVGPEGPKGSTGPSGPTGLPGPVGPTGKPGPRGDAGPLGPQGEPGARGMRGWKGDRGEKGKTGETPVLPKSAFTVGLTVLSKFPPSDAPVKFDRILYNEFGHYDVATGKFTCHVAGVYYFTYHVTVFSRNVQVSLVKNGVKVLHTKDGYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGLLLFCSA
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995824..2996596,2998048..2998110,3001960..3002125))
location: region:2995824-3002125:-1
so has part: feature:3001960-3002125:-1:exon
so has part: feature:2998048-2998110:-1:exon
so has part: feature:2995824-2996596:-1:exon

XP_036687197.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3001960-3002125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998048-2998110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2995824-2996596:-1:exon

C1QTNF9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: C1QTNF9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: complement C1q and tumor necrosis factor-related protein 9A isoform X1
translation: MRIWWLLFVSGVCAGMVNSQDTCGQGHPGVPGNPGHSGLPGRGGRDGAKGDKGDAGEPGHPGGPGKDGMTGEKGEPGADGNVEAKGVKGDQGSRGPPGKHGPQGLVGPMGEKGLRGETGAQGQKGEKGDVGPVGPEGPKGSTGPSGPTGLPGPVGPTGKPGPRGDAGPLGPQGEPGARGMRGWKGDRGEKGKTGETPVLPKSAFTVGLTVLSKFPPSDAPVKFDRILYNEFGHYDVATGKFTCHVAGVYYFTYHVTVFSRNVQVSLVKNGVKVLHTKDGYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGLLLFCSA
SIO_010081: C1QTNF9
subclass of: SO_0000673
so part of: C1QTNF9
location: complement(join(2995824..2996596,2998048..2998110,3001960..3002125))
location: region:2995824-3002125:-1
so has part: feature:3001960-3002125:-1:exon
so has part: feature:2998048-2998110:-1:exon
so has part: feature:2995824-2996596:-1:exon

XP_036687198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3001960-3002125:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2998048-2998110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2995824-2996596:-1:exon

SPATA13
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3007090..3223956)
location: region:3007090-3223956:-1
so has part: feature:3007090-3223956:-1:exon
subclass of: SO_0000010

118884014
type: Gene
SIO_000068: ncbigene

position:3007090:-1
position: 3007090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3223956:-1
position: 3223956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3007090-3223956:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831292.1
SIO_010081: SPATA13
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SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831296.1
SIO_010081: SPATA13
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SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831295.1
SIO_010081: SPATA13
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SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831293.1
SIO_010081: SPATA13
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SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831290.1
SIO_010081: SPATA13
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SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036831297.1
SIO_010081: SPATA13
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SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036831291.1
SIO_010081: SPATA13
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so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3011521-3012989:-1:exon
so has part: feature:3009017-3010730:-1:exon

position:3109146:-1
position: 3109146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3108526-3109146:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3079585-3081177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3011521-3012989:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3009017-3010730:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831298.1
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3009017..3010730,3011521..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081177,3090679..3090777))
location: region:3009017-3090777:-1
so has part: feature:3090679-3090777:-1:exon
so has part: feature:3079585-3081177:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3011521-3012989:-1:exon
so has part: feature:3009017-3010730:-1:exon

position:3090777:-1
position: 3090777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3090679-3090777:-1:exon

position:3090679:-1
position: 3090679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3079585-3081177:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3011521-3012989:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3009017-3010730:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831300.1
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3009017..3010730,3011521..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3079585..3079602))
location: region:3009017-3079602:-1
so has part: feature:3079585-3079602:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3011521-3012989:-1:exon
so has part: feature:3009017-3010730:-1:exon

position:3079602:-1
position: 3079602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3079602:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3011521-3012989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3009017-3010730:-1:exon

SPATA13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SPATA13
product: spermatogenesis associated 13, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_036831299.1
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3009017..3010730,3011521..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3034032..3034178))
location: region:3009017-3034178:-1
so has part: feature:3034032-3034178:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3011521-3012989:-1:exon
so has part: feature:3009017-3010730:-1:exon

position:3034178:-1
position: 3034178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3034032-3034178:-1:exon

position:3034032:-1
position: 3034032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3011521-3012989:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3009017-3010730:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X3
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKASTVFDLPTSQGFW
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3009173..3009216,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3009173-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3009173-3009216:-1:exon

XP_036687191.1
type: Protein
SIO_000068: ncbiprotein

position:3009173:-1
position: 3009173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3081018:-1
position: 3081018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3009173-3009216:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X2
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKASQQRDRKHGHQGTW
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3010684..3010730,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3010684-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3010684-3010730:-1:exon

XP_036687188.1
type: Protein
SIO_000068: ncbiprotein

position:3010684:-1
position: 3010684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3010684-3010730:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X2
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKASQQRDRKHGHQGTW
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3010684..3010730,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3010684-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3010684-3010730:-1:exon

XP_036687190.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3010684-3010730:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X1
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYGGGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3012811..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3012811-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3012811-3012989:-1:exon

XP_036687185.1
type: Protein
SIO_000068: ncbiprotein

position:3012811:-1
position: 3012811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012811-3012989:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X1
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYGGGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3012811..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3012811-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3012811-3012989:-1:exon

XP_036687186.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012811-3012989:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X1
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYGGGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3012811..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3012811-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3012811-3012989:-1:exon

XP_036687187.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012811-3012989:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X1
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYGGGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3012811..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3012811-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3012811-3012989:-1:exon

XP_036687192.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012811-3012989:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X1
translation: MTTAQNGHGRRAAVPGPISDPKDPGMVTYPACRHGGCGGAGAREARLSPARLLRLFSAGANRTRADPERPRPAGLVGSSSTWNALASFRKMGSFKKLKTSVLQGIQNREGWDAAKEGAEERDLGKAVPNGAAAGAPAGRCSPGPGFASDGSDPEEPDDGFARGALRSRSIRRAYGLGRIRLLDPEPPAPEPAAREAPAREPERNGFCRRSKSTDSLTFLKKSSFRRKSASHLAELRRAPESRGPRRTLSGSSADSDSSGGAPAGPRRCRSPLRAPDLARVLRLVGGGAAGRLGDPGGAPPGPRPYSRLHDDYSRRAVAGPERGRRGAEPPDPGLAGAGGSARDAAAGGAAPRAPGSSSGPAAREVSDRGSKEPGPGDRSPLEPEPPLGPARPTTPKPPSPRSPDAAPAKCPNSVSALSLSSVDSEERAEGPVQREQGPGSFQDALQTACDLGSENSGAGSHPQQSLGGANCPEEKTEEVVTEGSWRRTSAPEEERPEAQRVPRRRCAPGRRPRPRPLSDYGQPVSLSLSIPEDSIAVDPQKEDTEDGDHQPNGAPIDPADQTPAGGCPRGAPRRRPISVIGGVGFYGSSQAEEGEAILPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRRLMRASNISSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYGGGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3012811..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3054220..3054364,3056027..3056392,3079585..3081018))
location: region:3012811-3081018:-1
so has part: feature:3079585-3081018:-1:exon
so has part: feature:3056027-3056392:-1:exon
so has part: feature:3054220-3054364:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3012811-3012989:-1:exon

XP_036687193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3079585-3081018:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3056027-3056392:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3054220-3054364:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3012811-3012989:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X4
translation: MVARGEIARFWSLESLHLVSSDGGAEPSALADDNGSEEDYSYEDLCRASPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYGGGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3012811..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024932,3025997..3026133,3034032..3034086))
location: region:3012811-3034086:-1
so has part: feature:3034032-3034086:-1:exon
so has part: feature:3025997-3026133:-1:exon
so has part: feature:3024753-3024932:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3012811-3012989:-1:exon

XP_036687194.1
type: Protein
SIO_000068: ncbiprotein

position:3034086:-1
position: 3034086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3034032-3034086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3025997-3026133:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3024753-3024932:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3012811-3012989:-1:exon

SPATA13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SPATA13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 13 isoform X5
translation: MDEQELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGASGSPGEEPAEDAGRGRHKHPESKRQMRTNVIQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELAGLMKQGRYRHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDILERSSELIHSGELTRVTRQGKSQQRTFFLFDHQLVACKKDLLRRDVLYYRGRTDMDAVELVDLEDGRDGARTLGVRNAFKLVSRTGDEAHLFCAKKPEDKVRWLQACRDERRRVQEDRAMGMEISENQKKLAMLNAQKAGHGKSKGYGGGCPSAPPLQSLRPVHQRHVTVPASLPQQQVFALAEPKRKPSLFWHTFNKLTPFRK
SIO_010081: SPATA13
subclass of: SO_0000673
so part of: SPATA13
location: complement(join(3012811..3012989,3014762..3014836,3015270..3015642,3017369..3017498,3020892..3021124,3022779..3022958,3024317..3024502,3024753..3024878))
location: region:3012811-3024878:-1
so has part: feature:3024753-3024878:-1:exon
so has part: feature:3024317-3024502:-1:exon
so has part: feature:3022779-3022958:-1:exon
so has part: feature:3020892-3021124:-1:exon
so has part: feature:3017369-3017498:-1:exon
so has part: feature:3015270-3015642:-1:exon
so has part: feature:3014762-3014836:-1:exon
so has part: feature:3012811-3012989:-1:exon

XP_036687195.1
type: Protein
SIO_000068: ncbiprotein

position:3024878:-1
position: 3024878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3024753-3024878:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3024317-3024502:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3022779-3022958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3020892-3021124:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3017369-3017498:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3015270-3015642:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3014762-3014836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3012811-3012989:-1:exon

AMER2
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3344773..3354149)
location: region:3344773-3354149:-1
so has part: feature:3344773-3354149:-1:exon
subclass of: SO_0000010

118884390
type: Gene
SIO_000068: ncbigene

position:3344773:-1
position: 3344773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3354149:-1
position: 3354149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3344773-3354149:-1:exon

AMER2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: AMER2
product: APC membrane recruitment protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036832040.1
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(3344773..3354149)
location: region:3344773-3354149:-1
so has part: feature:3344773-3354149:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3344773-3354149:-1:exon

AMER2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: AMER2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: APC membrane recruitment protein 2
translation: METGGRGAAVSGGRAAAGGRRRKARAAAGTLAADMDLHCDRAAEPPAAEPPSGKINRAAFKLFKKRKPGGAMPSIFGVKNKGDGKGAGPAGLVRSRTHDGLAEALAVEGGRREEPRAGGGDGARPGPAAPRAAPGGAGPAAGGSVAKSHSFFSLLRKNGRPESGGAEQADAGKAGGRQKRGLRGLLGGVRWRRKDRRPKDAAPAGRAGAPGSLARPGSLTASLECVKEEAPAAAREPEPAGEPAAGEPEPACAPGEGAAGPGRAERPRAPPEPEPEPRAGEGRPAEDAAGPGAAPAETAPRPDSEGGRAPAAPDPSSVDPPSDPSADRICLMFSDVTSLKSFDSLTGCGDIIADPEDEAGPSCARHAPAPGQPGPAQKPPGVVAYQGGGEEMASPAEADDSYLQEFWDMLSQTEDQGPGPQQGAAPAAAAAAAAAPEAQVASETPKDARRAEGAKDASSVKRRRLHRLPTELQPKEEPKHPDEEPQEGVPNSDEGYWDSPTPGPREDGSGGGVRKAGVPRDSDSGDALYDLYAEPDGSPAALPAAAEDTSCSSRLKPVSPVTVTCALRTPGSLPKDSKIPISIKHLANLPPSHPVVHQQPARSELPRTKIPVSKVLVRRVSSRGLAGTTLRAAACHDSAKKL
SIO_010081: AMER2
subclass of: SO_0000673
so part of: AMER2
location: complement(3352221..3354149)
location: region:3352221-3354149:-1
so has part: feature:3352221-3354149:-1:exon

XP_036687935.1
type: Protein
SIO_000068: ncbiprotein

position:3352221:-1
position: 3352221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3352221-3354149:-1:exon

MTMR6
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3415595..3443854)
location: region:3415595-3443854:-1
so has part: feature:3415595-3443854:-1:exon
subclass of: SO_0000010

118884148
type: Gene
SIO_000068: ncbigene

position:3415595:-1
position: 3415595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3443854:-1
position: 3443854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3415595-3443854:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MTMR6
product: myotubularin related protein 6, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831557.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3415595..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3424382..3424491,3425241..3425373,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443854))
location: region:3415595-3443854:-1
so has part: feature:3443711-3443854:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3415595-3417842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443854:-1:exon

position:3443711:-1
position: 3443711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

position:3432558:-1
position: 3432558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3432674:-1
position: 3432674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

position:3430644:-1
position: 3430644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3430806:-1
position: 3430806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

position:3429233:-1
position: 3429233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3429390:-1
position: 3429390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

position:3428921:-1
position: 3428921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3429049:-1
position: 3429049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

position:3427519:-1
position: 3427519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3427653:-1
position: 3427653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3425241-3425373:-1:exon

position:3425241:-1
position: 3425241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3425373:-1
position: 3425373
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3424382-3424491:-1:exon

position:3424382:-1
position: 3424382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3424491:-1
position: 3424491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3421074-3421123:-1:exon

position:3421074:-1
position: 3421074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3421123:-1
position: 3421123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3420438-3420638:-1:exon

position:3420438:-1
position: 3420438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420638:-1
position: 3420638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3419924-3420055:-1:exon

position:3419924:-1
position: 3419924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3420055:-1
position: 3420055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3419710-3419836:-1:exon

position:3419710:-1
position: 3419710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3419836:-1
position: 3419836
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3415595-3417842:-1:exon

position:3417842:-1
position: 3417842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MTMR6
product: myotubularin related protein 6, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036831555.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3415595..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3423846..3423971,3424382..3424491,3425241..3425373,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443854))
location: region:3415595-3443854:-1
so has part: feature:3443711-3443854:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3423846-3423971:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3415595-3417842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3425241-3425373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3424382-3424491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3423846-3423971:-1:exon

position:3423846:-1
position: 3423846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3423971:-1
position: 3423971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3421074-3421123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3420438-3420638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3419924-3420055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3419710-3419836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3415595-3417842:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MTMR6
product: myotubularin related protein 6, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036831556.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3415595..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3424382..3424491,3425241..3425373,3426812..3426862,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443854))
location: region:3415595-3443854:-1
so has part: feature:3443711-3443854:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3426812-3426862:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3415595-3417842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3426812-3426862:-1:exon

position:3426812:-1
position: 3426812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3426862:-1
position: 3426862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3425241-3425373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3424382-3424491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3421074-3421123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3420438-3420638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3419924-3420055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3419710-3419836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3415595-3417842:-1:exon

MTMR6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: MTMR6
product: myotubularin related protein 6, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_036831554.1
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3415595..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3423846..3423971,3424382..3424491,3425241..3425373,3426812..3426862,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443854))
location: region:3415595-3443854:-1
so has part: feature:3443711-3443854:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3426812-3426862:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3423846-3423971:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3415595-3417842:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443854:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3426812-3426862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3425241-3425373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3424382-3424491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3423846-3423971:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3421074-3421123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3420438-3420638:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3419924-3420055:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3419710-3419836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3415595-3417842:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X4
translation: MEHIRTTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKETWILHHHIALVEKLALTTSGCPLVIQCKNFRIVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLRGWQLVDLTEEYKRMGLPNSNWQLSDANRDYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQNKEAAICRCSQPLSGFSARCLEDEHLLQAISKANPANRYMYVMDTRPRLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGSRGLSVSDFYSGLEGAGWLRHIKAVTDAAIFLAKVLIEKDWISFGHKYSDRCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHIHSCQFGNFIGNCQKEREELKLKEKTYSLWPFLLHDQKKYFNPLYSSTSQKLAVLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVFNIIMNMNEQNKQLQKDVKDLESQIKQHKNKQTDGVLTKELLNSVRPESPALKTSLCLKEQTLLPVKDALRTVEGSSPADNRYSEYADEFSKAEPAVVSSEYGVARMTC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3417582..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3424382..3424491,3425241..3425373,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443734))
location: region:3417582-3443734:-1
so has part: feature:3443711-3443734:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3417582-3417842:-1:exon

XP_036687452.1
type: Protein
SIO_000068: ncbiprotein

position:3417582:-1
position: 3417582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3443734:-1
position: 3443734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3425241-3425373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3424382-3424491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3421074-3421123:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3420438-3420638:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3419924-3420055:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3419710-3419836:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3417582-3417842:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X2
translation: MEHIRTTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKETWILHHHIALVEKLALTTSGCPLVIQCKNFRIVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLRGWQLVDLTEEYKRMGLPNSNWQLSDANRDYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQNKEAAICRCSQPLSGFSARCLEDEHLLQAISKANPANRYMYVMDTRPRLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGSRGLSVSDFYSGLEGAGWLRHIKAVTDAAIFLAKAIMVENASVLVHCSDGWDRTSQVCSLGSLLLDPYYRTIRGFMVLIEKDWISFGHKYSDRCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHIHSCQFGNFIGNCQKEREELKLKEKTYSLWPFLLHDQKKYFNPLYSSTSQKLAVLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVFNIIMNMNEQNKQLQKDVKDLESQIKQHKNKQTDGVLTKELLNSVRPESPALKTSLCLKEQTLLPVKDALRTVEGSSPADNRYSEYADEFSKAEPAVVSSEYGVARMTC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3417582..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3423846..3423971,3424382..3424491,3425241..3425373,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443734))
location: region:3417582-3443734:-1
so has part: feature:3443711-3443734:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3423846-3423971:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3417582-3417842:-1:exon

XP_036687450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3425241-3425373:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3424382-3424491:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3423846-3423971:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3421074-3421123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3420438-3420638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3419924-3420055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3419710-3419836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3417582-3417842:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X3
translation: MEHIRTTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKETWILHHHIALVEKLALTTSGCPLVIQCKNFRIVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLRGWQLVDLTEEYKRMGLPNSNWQLSDANRDYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQNKEAAICRCSQPLSGFSARCLEDEHLLQAISKANPANRYMYVMDTRPRHRMQSWWATQKDIGRIILNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGSRGLSVSDFYSGLEGAGWLRHIKAVTDAAIFLAKVLIEKDWISFGHKYSDRCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHIHSCQFGNFIGNCQKEREELKLKEKTYSLWPFLLHDQKKYFNPLYSSTSQKLAVLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVFNIIMNMNEQNKQLQKDVKDLESQIKQHKNKQTDGVLTKELLNSVRPESPALKTSLCLKEQTLLPVKDALRTVEGSSPADNRYSEYADEFSKAEPAVVSSEYGVARMTC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3417582..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3424382..3424491,3425241..3425373,3426812..3426862,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443734))
location: region:3417582-3443734:-1
so has part: feature:3443711-3443734:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3426812-3426862:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3417582-3417842:-1:exon

XP_036687451.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3426812-3426862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3425241-3425373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3424382-3424491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3421074-3421123:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3420438-3420638:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3419924-3420055:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3419710-3419836:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3417582-3417842:-1:exon

MTMR6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: MTMR6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myotubularin-related protein 6 isoform X1
translation: MEHIRTTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSHQKETWILHHHIALVEKLALTTSGCPLVIQCKNFRIVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLRGWQLVDLTEEYKRMGLPNSNWQLSDANRDYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQNKEAAICRCSQPLSGFSARCLEDEHLLQAISKANPANRYMYVMDTRPRHRMQSWWATQKDIGRIILNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVSGSRGLSVSDFYSGLEGAGWLRHIKAVTDAAIFLAKAIMVENASVLVHCSDGWDRTSQVCSLGSLLLDPYYRTIRGFMVLIEKDWISFGHKYSDRCGHLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFNEAFLLQIHEHIHSCQFGNFIGNCQKEREELKLKEKTYSLWPFLLHDQKKYFNPLYSSTSQKLAVLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVFNIIMNMNEQNKQLQKDVKDLESQIKQHKNKQTDGVLTKELLNSVRPESPALKTSLCLKEQTLLPVKDALRTVEGSSPADNRYSEYADEFSKAEPAVVSSEYGVARMTC
SIO_010081: MTMR6
subclass of: SO_0000673
so part of: MTMR6
location: complement(join(3417582..3417842,3419710..3419836,3419924..3420055,3420438..3420638,3421074..3421123,3423846..3423971,3424382..3424491,3425241..3425373,3426812..3426862,3427519..3427653,3428921..3429049,3429233..3429390,3430644..3430806,3432558..3432674,3443711..3443734))
location: region:3417582-3443734:-1
so has part: feature:3443711-3443734:-1:exon
so has part: feature:3432558-3432674:-1:exon
so has part: feature:3430644-3430806:-1:exon
so has part: feature:3429233-3429390:-1:exon
so has part: feature:3428921-3429049:-1:exon
so has part: feature:3427519-3427653:-1:exon
so has part: feature:3426812-3426862:-1:exon
so has part: feature:3425241-3425373:-1:exon
so has part: feature:3424382-3424491:-1:exon
so has part: feature:3423846-3423971:-1:exon
so has part: feature:3421074-3421123:-1:exon
so has part: feature:3420438-3420638:-1:exon
so has part: feature:3419924-3420055:-1:exon
so has part: feature:3419710-3419836:-1:exon
so has part: feature:3417582-3417842:-1:exon

XP_036687449.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3443711-3443734:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3432558-3432674:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3430644-3430806:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3429233-3429390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3428921-3429049:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3427519-3427653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3426812-3426862:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3425241-3425373:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3424382-3424491:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3423846-3423971:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3421074-3421123:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3420438-3420638:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3419924-3420055:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3419710-3419836:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3417582-3417842:-1:exon

NUP58
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3459205..3493636
location: region:3459205-3493636:1
so has part: feature:3459205-3493636:1:exon
subclass of: SO_0000010

118883972
type: Gene
SIO_000068: ncbigene

position:3459205:1
position: 3459205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3493636:1
position: 3493636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3459205-3493636:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: NUP58
product: nucleoporin 58, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_036831162.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(3459205..3459518,3463626..3463768,3467578..3467727,3468350..3468487,3470168..3470278,3471983..3472007,3473250..3473315,3473633..3473807,3477164..3477243,3479234..3479352,3479780..3479862,3482838..3483039,3488447..3488545,3490124..3490219,3491479..3493636)
location: region:3459205-3493636:1
so has part: feature:3459205-3459518:1:exon
so has part: feature:3463626-3463768:1:exon
so has part: feature:3467578-3467727:1:exon
so has part: feature:3468350-3468487:1:exon
so has part: feature:3470168-3470278:1:exon
so has part: feature:3471983-3472007:1:exon
so has part: feature:3473250-3473315:1:exon
so has part: feature:3473633-3473807:1:exon
so has part: feature:3477164-3477243:1:exon
so has part: feature:3479234-3479352:1:exon
so has part: feature:3479780-3479862:1:exon
so has part: feature:3482838-3483039:1:exon
so has part: feature:3488447-3488545:1:exon
so has part: feature:3490124-3490219:1:exon
so has part: feature:3491479-3493636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3459205-3459518:1:exon

position:3459518:1
position: 3459518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3463626-3463768:1:exon

position:3463626:1
position: 3463626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3463768:1
position: 3463768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3467578-3467727:1:exon

position:3467578:1
position: 3467578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3467727:1
position: 3467727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3468350-3468487:1:exon

position:3468350:1
position: 3468350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3468487:1
position: 3468487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3470168-3470278:1:exon

position:3470168:1
position: 3470168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3470278:1
position: 3470278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3471983-3472007:1:exon

position:3471983:1
position: 3471983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3472007:1
position: 3472007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3473250-3473315:1:exon

position:3473250:1
position: 3473250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3473315:1
position: 3473315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3473633-3473807:1:exon

position:3473633:1
position: 3473633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3473807:1
position: 3473807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3477164-3477243:1:exon

position:3477164:1
position: 3477164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3477243:1
position: 3477243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3479234-3479352:1:exon

position:3479234:1
position: 3479234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3479352:1
position: 3479352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3479780-3479862:1:exon

position:3479780:1
position: 3479780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3479862:1
position: 3479862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3482838-3483039:1:exon

position:3482838:1
position: 3482838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3483039:1
position: 3483039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3488447-3488545:1:exon

position:3488447:1
position: 3488447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3488545:1
position: 3488545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3490124-3490219:1:exon

position:3490124:1
position: 3490124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3490219:1
position: 3490219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3491479-3493636:1:exon

position:3491479:1
position: 3491479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: NUP58
product: nucleoporin 58, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_036831164.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(3459205..3459518,3463626..3463768,3467578..3467727,3468350..3468487,3470168..3470278,3471983..3472007,3473250..3473315,3473633..3473807,3477164..3477243,3479234..3479352,3479780..3479862,3482838..3483039,3490124..3490219,3491479..3493636)
location: region:3459205-3493636:1
so has part: feature:3459205-3459518:1:exon
so has part: feature:3463626-3463768:1:exon
so has part: feature:3467578-3467727:1:exon
so has part: feature:3468350-3468487:1:exon
so has part: feature:3470168-3470278:1:exon
so has part: feature:3471983-3472007:1:exon
so has part: feature:3473250-3473315:1:exon
so has part: feature:3473633-3473807:1:exon
so has part: feature:3477164-3477243:1:exon
so has part: feature:3479234-3479352:1:exon
so has part: feature:3479780-3479862:1:exon
so has part: feature:3482838-3483039:1:exon
so has part: feature:3490124-3490219:1:exon
so has part: feature:3491479-3493636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3459205-3459518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3463626-3463768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3467578-3467727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3468350-3468487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3470168-3470278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3471983-3472007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3473250-3473315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3473633-3473807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3477164-3477243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3479234-3479352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3479780-3479862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3482838-3483039:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490124-3490219:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3491479-3493636:1:exon

NUP58
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: NUP58
product: nucleoporin 58, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_036831163.1
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(3459205..3459518,3463629..3463768,3467578..3467727,3468350..3468487,3470168..3470278,3471983..3472007,3473250..3473315,3473633..3473807,3477164..3477243,3479234..3479352,3479780..3479862,3482838..3483039,3488447..3488545,3490124..3490219,3491479..3493636)
location: region:3459205-3493636:1
so has part: feature:3459205-3459518:1:exon
so has part: feature:3463629-3463768:1:exon
so has part: feature:3467578-3467727:1:exon
so has part: feature:3468350-3468487:1:exon
so has part: feature:3470168-3470278:1:exon
so has part: feature:3471983-3472007:1:exon
so has part: feature:3473250-3473315:1:exon
so has part: feature:3473633-3473807:1:exon
so has part: feature:3477164-3477243:1:exon
so has part: feature:3479234-3479352:1:exon
so has part: feature:3479780-3479862:1:exon
so has part: feature:3482838-3483039:1:exon
so has part: feature:3488447-3488545:1:exon
so has part: feature:3490124-3490219:1:exon
so has part: feature:3491479-3493636:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3459205-3459518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3463629-3463768:1:exon

position:3463629:1
position: 3463629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3467578-3467727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3468350-3468487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3470168-3470278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3471983-3472007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3473250-3473315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3473633-3473807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3477164-3477243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3479234-3479352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3479780-3479862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3482838-3483039:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3488447-3488545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490124-3490219:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3491479-3493636:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X1
translation: MSAGFSFGSSTLGSSTVAASGSGTGGGFSFGTAASSSPSVGLSFGTLGSTATPVTTSAPSGGFGTGLFGSKPATGFTLGGTNTGPPATTSASTAGFSLGFSKPAASATPFALPITSASAGGLTLSSALTSTPAASTGFTLSSLSGTAAAATTAPAGLSLGGALTGLGGPLFQSASTATSGLGQNALGLSLGTAAATSSAGNEGLGGLDFSSSSDKKSDKTGTRPEDSKALKDETLPAVICQDVDSLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRSALSVDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFEARRAEAKKWQNAPRVTTGPTPFSNMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGAPFGSGIGTGLQSSGLGSSNLGGFGASSGFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(3459412..3459518,3463626..3463768,3467578..3467727,3468350..3468487,3470168..3470278,3471983..3472007,3473250..3473315,3473633..3473807,3477164..3477243,3479234..3479352,3479780..3479862,3482838..3483039,3488447..3488545,3490124..3490219,3491479..3491648)
location: region:3459412-3491648:1
so has part: feature:3459412-3459518:1:exon
so has part: feature:3463626-3463768:1:exon
so has part: feature:3467578-3467727:1:exon
so has part: feature:3468350-3468487:1:exon
so has part: feature:3470168-3470278:1:exon
so has part: feature:3471983-3472007:1:exon
so has part: feature:3473250-3473315:1:exon
so has part: feature:3473633-3473807:1:exon
so has part: feature:3477164-3477243:1:exon
so has part: feature:3479234-3479352:1:exon
so has part: feature:3479780-3479862:1:exon
so has part: feature:3482838-3483039:1:exon
so has part: feature:3488447-3488545:1:exon
so has part: feature:3490124-3490219:1:exon
so has part: feature:3491479-3491648:1:exon

XP_036687057.1
type: Protein
SIO_000068: ncbiprotein

position:3459412:1
position: 3459412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3491648:1
position: 3491648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3459412-3459518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3463626-3463768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3467578-3467727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3468350-3468487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3470168-3470278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3471983-3472007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3473250-3473315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3473633-3473807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3477164-3477243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3479234-3479352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3479780-3479862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3482838-3483039:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3488447-3488545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490124-3490219:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3491479-3491648:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X3
translation: MSAGFSFGSSTLGSSTVAASGSGTGGGFSFGTAASSSPSVGLSFGTLGSTATPVTTSAPSGGFGTGLFGSKPATGFTLGGTNTGPPATTSASTAGFSLGFSKPAASATPFALPITSASAGGLTLSSALTSTPAASTGFTLSSLSGTAAAATTAPAGLSLGGALTGLGGPLFQSASTATSGLGQNALGLSLGTAAATSSAGNEGLGGLDFSSSSDKKSDKTGTRPEDSKALKDETLPAVICQDVDSLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRSALSVDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFEARRAEAKKWQNAPRVTTGPTPFSNMPNAAAVAMAATLTQQQQPATGFGASSGFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(3459412..3459518,3463626..3463768,3467578..3467727,3468350..3468487,3470168..3470278,3471983..3472007,3473250..3473315,3473633..3473807,3477164..3477243,3479234..3479352,3479780..3479862,3482838..3483039,3490124..3490219,3491479..3491648)
location: region:3459412-3491648:1
so has part: feature:3459412-3459518:1:exon
so has part: feature:3463626-3463768:1:exon
so has part: feature:3467578-3467727:1:exon
so has part: feature:3468350-3468487:1:exon
so has part: feature:3470168-3470278:1:exon
so has part: feature:3471983-3472007:1:exon
so has part: feature:3473250-3473315:1:exon
so has part: feature:3473633-3473807:1:exon
so has part: feature:3477164-3477243:1:exon
so has part: feature:3479234-3479352:1:exon
so has part: feature:3479780-3479862:1:exon
so has part: feature:3482838-3483039:1:exon
so has part: feature:3490124-3490219:1:exon
so has part: feature:3491479-3491648:1:exon

XP_036687059.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3459412-3459518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3463626-3463768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3467578-3467727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3468350-3468487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3470168-3470278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3471983-3472007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3473250-3473315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3473633-3473807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3477164-3477243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3479234-3479352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3479780-3479862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3482838-3483039:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3490124-3490219:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3491479-3491648:1:exon

NUP58
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: NUP58
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin p58/p45 isoform X2
translation: MSAGFSFGSSTLGSSTVAASGSGTGGGFSFGTAASSPSVGLSFGTLGSTATPVTTSAPSGGFGTGLFGSKPATGFTLGGTNTGPPATTSASTAGFSLGFSKPAASATPFALPITSASAGGLTLSSALTSTPAASTGFTLSSLSGTAAAATTAPAGLSLGGALTGLGGPLFQSASTATSGLGQNALGLSLGTAAATSSAGNEGLGGLDFSSSSDKKSDKTGTRPEDSKALKDETLPAVICQDVDSLQKFVKEQKQVQEEISRMSSKAMLKVQEDIKALKQLLSLAASGLQRSALSVDKLKVETAQELKNAEIALRTQKTPPGLQHENTAPADYFRILVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVALAAQLQSIHENVKVLKEQYLGYRKMFLGDAVDVFEARRAEAKKWQNAPRVTTGPTPFSNMPNAAAVAMAATLTQQQQPATGPQPSLGVSFGAPFGSGIGTGLQSSGLGSSNLGGFGASSGFGCSTTGASTFGFGTTNKPSGSLSAGFGSSSTSGFNFSNPGITASAGLTFGVSNPASAGFGTGGQLLQLKKPPAGNKRGKR
SIO_010081: NUP58
subclass of: SO_0000673
so part of: NUP58
location: join(3459412..3459518,3463629..3463768,3467578..3467727,3468350..3468487,3470168..3470278,3471983..3472007,3473250..3473315,3473633..3473807,3477164..3477243,3479234..3479352,3479780..3479862,3482838..3483039,3488447..3488545,3490124..3490219,3491479..3491648)
location: region:3459412-3491648:1
so has part: feature:3459412-3459518:1:exon
so has part: feature:3463629-3463768:1:exon
so has part: feature:3467578-3467727:1:exon
so has part: feature:3468350-3468487:1:exon
so has part: feature:3470168-3470278:1:exon
so has part: feature:3471983-3472007:1:exon
so has part: feature:3473250-3473315:1:exon
so has part: feature:3473633-3473807:1:exon
so has part: feature:3477164-3477243:1:exon
so has part: feature:3479234-3479352:1:exon
so has part: feature:3479780-3479862:1:exon
so has part: feature:3482838-3483039:1:exon
so has part: feature:3488447-3488545:1:exon
so has part: feature:3490124-3490219:1:exon
so has part: feature:3491479-3491648:1:exon

XP_036687058.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3459412-3459518:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3463629-3463768:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3467578-3467727:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3468350-3468487:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3470168-3470278:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3471983-3472007:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3473250-3473315:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3473633-3473807:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3477164-3477243:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3479234-3479352:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3479780-3479862:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3482838-3483039:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3488447-3488545:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3490124-3490219:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3491479-3491648:1:exon

LOC118884388
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3514404..4059441
location: region:3514404-4059441:1
so has part: feature:3514404-4059441:1:exon
subclass of: SO_0000010

118884388
type: Gene
SIO_000068: ncbigene

position:3514404:1
position: 3514404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4059441:1
position: 4059441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3514404-4059441:1:exon

LOC118884388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LOC118884388
product: phospholipid-transporting ATPase IB, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036832038.1
SIO_010081: LOC118884388
subclass of: SO_0000673
so part of: LOC118884388
location: join(3514404..3514477,3606740..3606884,3638482..3638581,3639048..3639146,3640057..3640102,3641150..3641190,3645626..3645699,3647598..3647667,3648299..3648426,3649603..3649714,3655280..3655445,3656388..3656515,3657345..3657422,3659846..3659934,3664931..3664975,3667047..3667122,3669555..3669660,3670017..3670099,3672810..3672859,3673808..3673877,3675490..3675574,3676618..3676757,3677965..3678103,3688245..3688309,3772622..3772794,3842546..3842729,3846663..3846773,3903516..3903590,3910530..3910652,3912628..3912706,3928016..3928077,3928745..3928801,3930368..3930475,4002102..4002190,4008629..4008733,4043292..4043383,4054121..4059441)
location: region:3514404-4059441:1
so has part: feature:3514404-3514477:1:exon
so has part: feature:3606740-3606884:1:exon
so has part: feature:3638482-3638581:1:exon
so has part: feature:3639048-3639146:1:exon
so has part: feature:3640057-3640102:1:exon
so has part: feature:3641150-3641190:1:exon
so has part: feature:3645626-3645699:1:exon
so has part: feature:3647598-3647667:1:exon
so has part: feature:3648299-3648426:1:exon
so has part: feature:3649603-3649714:1:exon
so has part: feature:3655280-3655445:1:exon
so has part: feature:3656388-3656515:1:exon
so has part: feature:3657345-3657422:1:exon
so has part: feature:3659846-3659934:1:exon
so has part: feature:3664931-3664975:1:exon
so has part: feature:3667047-3667122:1:exon
so has part: feature:3669555-3669660:1:exon
so has part: feature:3670017-3670099:1:exon
so has part: feature:3672810-3672859:1:exon
so has part: feature:3673808-3673877:1:exon
so has part: feature:3675490-3675574:1:exon
so has part: feature:3676618-3676757:1:exon
so has part: feature:3677965-3678103:1:exon
so has part: feature:3688245-3688309:1:exon
so has part: feature:3772622-3772794:1:exon
so has part: feature:3842546-3842729:1:exon
so has part: feature:3846663-3846773:1:exon
so has part: feature:3903516-3903590:1:exon
so has part: feature:3910530-3910652:1:exon
so has part: feature:3912628-3912706:1:exon
so has part: feature:3928016-3928077:1:exon
so has part: feature:3928745-3928801:1:exon
so has part: feature:3930368-3930475:1:exon
so has part: feature:4002102-4002190:1:exon
so has part: feature:4008629-4008733:1:exon
so has part: feature:4043292-4043383:1:exon
so has part: feature:4054121-4059441:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3514404-3514477:1:exon

position:3514477:1
position: 3514477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3606740-3606884:1:exon

position:3606740:1
position: 3606740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3606884:1
position: 3606884
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:3638482-3638581:1:exon

position:3638482:1
position: 3638482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3638581:1
position: 3638581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3639048-3639146:1:exon

position:3639048:1
position: 3639048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3639146:1
position: 3639146
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:3640057-3640102:1:exon

position:3640057:1
position: 3640057
reference: sequence
type: ForwardStrandPosition
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position:3640102:1
position: 3640102
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:3641150-3641190:1:exon

position:3641150:1
position: 3641150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3641190:1
position: 3641190
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:3645626-3645699:1:exon

position:3645626:1
position: 3645626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3645699:1
position: 3645699
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:3647598-3647667:1:exon

position:3647598:1
position: 3647598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3647667:1
position: 3647667
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 9
SIO_000628: feature:3648299-3648426:1:exon

position:3648299:1
position: 3648299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3648426:1
position: 3648426
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 10
SIO_000628: feature:3649603-3649714:1:exon

position:3649603:1
position: 3649603
reference: sequence
type: ForwardStrandPosition
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position:3649714:1
position: 3649714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3655280-3655445:1:exon

position:3655280:1
position: 3655280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3655445:1
position: 3655445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3656388-3656515:1:exon

position:3656388:1
position: 3656388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3656515:1
position: 3656515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3657345-3657422:1:exon

position:3657345:1
position: 3657345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3657422:1
position: 3657422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3659846-3659934:1:exon

position:3659846:1
position: 3659846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3659934:1
position: 3659934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3664931-3664975:1:exon

position:3664931:1
position: 3664931
reference: sequence
type: ForwardStrandPosition
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position:3664975:1
position: 3664975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3667047-3667122:1:exon

position:3667047:1
position: 3667047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3667122:1
position: 3667122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3669555-3669660:1:exon

position:3669555:1
position: 3669555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3669660:1
position: 3669660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3670017-3670099:1:exon

position:3670017:1
position: 3670017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3670099:1
position: 3670099
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:3672810-3672859:1:exon

position:3672810:1
position: 3672810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672859:1
position: 3672859
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:3673808-3673877:1:exon

position:3673808:1
position: 3673808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3673877:1
position: 3673877
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 21
SIO_000628: feature:3675490-3675574:1:exon

position:3675490:1
position: 3675490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3675574:1
position: 3675574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3676618-3676757:1:exon

position:3676618:1
position: 3676618
reference: sequence
type: ForwardStrandPosition
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position:3676757:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:3677965-3678103:1:exon

position:3677965:1
position: 3677965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3678103:1
position: 3678103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:3688245-3688309:1:exon

position:3688245:1
position: 3688245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3688309:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 25
SIO_000628: feature:3772622-3772794:1:exon

position:3772622:1
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reference: sequence
type: ForwardStrandPosition
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position:3772794:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 26
SIO_000628: feature:3842546-3842729:1:exon

position:3842546:1
position: 3842546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3842729:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 27
SIO_000628: feature:3846663-3846773:1:exon

position:3846663:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3846773:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 28
SIO_000628: feature:3903516-3903590:1:exon

position:3903516:1
position: 3903516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3903590:1
position: 3903590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:3910530-3910652:1:exon

position:3910530:1
position: 3910530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3910652:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:3912628-3912706:1:exon

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reference: sequence
type: ForwardStrandPosition
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position:3912706:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:3928016-3928077:1:exon

position:3928016:1
position: 3928016
reference: sequence
type: ForwardStrandPosition
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position:3928077:1
position: 3928077
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:3928745-3928801:1:exon

position:3928745:1
position: 3928745
reference: sequence
type: ForwardStrandPosition
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position:3928801:1
position: 3928801
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 33
SIO_000628: feature:3930368-3930475:1:exon

position:3930368:1
position: 3930368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3930475:1
position: 3930475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:4002102-4002190:1:exon

position:4002102:1
position: 4002102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4002190:1
position: 4002190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:4008629-4008733:1:exon

position:4008629:1
position: 4008629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4008733:1
position: 4008733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:4043292-4043383:1:exon

position:4043292:1
position: 4043292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4043383:1
position: 4043383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:4054121-4059441:1:exon

position:4054121:1
position: 4054121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118884388
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LOC118884388
product: phospholipid-transporting ATPase IB, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_036832037.1
SIO_010081: LOC118884388
subclass of: SO_0000673
so part of: LOC118884388
location: join(3527785..3527827,3606740..3606884,3638482..3638581,3639048..3639146,3640057..3640102,3641150..3641190,3645626..3645699,3647598..3647667,3648299..3648426,3649603..3649714,3655280..3655445,3656388..3656515,3657345..3657422,3659846..3659934,3664931..3664975,3667047..3667122,3669555..3669660,3670017..3670099,3672810..3672859,3673808..3673877,3675490..3675574,3676618..3676757,3677965..3678103,3688245..3688309,3772622..3772794,3842546..3842729,3846663..3846773,3903516..3903590,3910530..3910652,3912628..3912706,3928016..3928077,3928745..3928801,3930368..3930475,4002102..4002190,4008629..4008733,4043292..4043383,4054121..4059441)
location: region:3527785-4059441:1
so has part: feature:3527785-3527827:1:exon
so has part: feature:3606740-3606884:1:exon
so has part: feature:3638482-3638581:1:exon
so has part: feature:3639048-3639146:1:exon
so has part: feature:3640057-3640102:1:exon
so has part: feature:3641150-3641190:1:exon
so has part: feature:3645626-3645699:1:exon
so has part: feature:3647598-3647667:1:exon
so has part: feature:3648299-3648426:1:exon
so has part: feature:3649603-3649714:1:exon
so has part: feature:3655280-3655445:1:exon
so has part: feature:3656388-3656515:1:exon
so has part: feature:3657345-3657422:1:exon
so has part: feature:3659846-3659934:1:exon
so has part: feature:3664931-3664975:1:exon
so has part: feature:3667047-3667122:1:exon
so has part: feature:3669555-3669660:1:exon
so has part: feature:3670017-3670099:1:exon
so has part: feature:3672810-3672859:1:exon
so has part: feature:3673808-3673877:1:exon
so has part: feature:3675490-3675574:1:exon
so has part: feature:3676618-3676757:1:exon
so has part: feature:3677965-3678103:1:exon
so has part: feature:3688245-3688309:1:exon
so has part: feature:3772622-3772794:1:exon
so has part: feature:3842546-3842729:1:exon
so has part: feature:3846663-3846773:1:exon
so has part: feature:3903516-3903590:1:exon
so has part: feature:3910530-3910652:1:exon
so has part: feature:3912628-3912706:1:exon
so has part: feature:3928016-3928077:1:exon
so has part: feature:3928745-3928801:1:exon
so has part: feature:3930368-3930475:1:exon
so has part: feature:4002102-4002190:1:exon
so has part: feature:4008629-4008733:1:exon
so has part: feature:4043292-4043383:1:exon
so has part: feature:4054121-4059441:1:exon

position:3527785:1
position: 3527785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3527785-3527827:1:exon

position:3527827:1
position: 3527827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3606740-3606884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3638482-3638581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3639048-3639146:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3640057-3640102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3641150-3641190:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3645626-3645699:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3647598-3647667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3648299-3648426:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3649603-3649714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3655280-3655445:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3656388-3656515:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3657345-3657422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3659846-3659934:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3664931-3664975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3667047-3667122:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3669555-3669660:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3670017-3670099:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3672810-3672859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3673808-3673877:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3675490-3675574:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3676618-3676757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3677965-3678103:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3688245-3688309:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3772622-3772794:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3842546-3842729:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3846663-3846773:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3903516-3903590:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3910530-3910652:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3912628-3912706:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3928016-3928077:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3928745-3928801:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3930368-3930475:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4002102-4002190:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4008629-4008733:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4043292-4043383:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4054121-4059441:1:exon

LOC118884388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LOC118884388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB isoform X1
translation: MYLSRRSRTRASVGPVRSSSGYKKADDEMSRATSVGDLLDAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQCLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGVSHTADMQVREVLMKLSGSIECEGPNRHLYDFTGNLNLDGKSPVALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALYWNGSQGGKNWYIKKMDTSSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYLGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELTREPSSDDFCQIPPPPSDSCDFDDPRLLKNIEDHHPTAPCIQEFLTLLAVCHTVVPEKDRDNIIYQASSPDEAALVKGARKLGFVFTARTPYSVIIEAMGQEETFGILNVLEFSSDRKRMSVIVRTPSGQLRLYCKGADNVIFERLSKDSKYMQETLCHLEYFATEGLRTLCVAYADLSESDYAEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKEDSLDATRAAITQHCADLGSLLGKENDAALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVEVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCSQESMLRFPQLYRITQNAEGFNTKVFWGHCINALVHSLILFWFPMKALEHDTVLANGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLIWLVFFGIYSTIWPTIPIAPDMKGQATMVLSSAHFWLGLFLVPTACLMEDVVWRAAKHTCKKTLLEEVQELERKSRVMGRAVLRDSDGKRTNERDRLLKRLGRKTPPTHFRGGSLQQSVPHGYAFSQEEHGAVTQEEIVRAYDTTKQKSRKK
SIO_010081: LOC118884388
subclass of: SO_0000673
so part of: LOC118884388
location: join(3527788..3527827,3606740..3606884,3638482..3638581,3639048..3639146,3640057..3640102,3641150..3641190,3645626..3645699,3647598..3647667,3648299..3648426,3649603..3649714,3655280..3655445,3656388..3656515,3657345..3657422,3659846..3659934,3664931..3664975,3667047..3667122,3669555..3669660,3670017..3670099,3672810..3672859,3673808..3673877,3675490..3675574,3676618..3676757,3677965..3678103,3688245..3688309,3772622..3772794,3842546..3842729,3846663..3846773,3903516..3903590,3910530..3910652,3912628..3912706,3928016..3928077,3928745..3928801,3930368..3930475,4002102..4002190,4008629..4008733,4043292..4043383,4054121..4054218)
location: region:3527788-4054218:1
so has part: feature:3527788-3527827:1:exon
so has part: feature:3606740-3606884:1:exon
so has part: feature:3638482-3638581:1:exon
so has part: feature:3639048-3639146:1:exon
so has part: feature:3640057-3640102:1:exon
so has part: feature:3641150-3641190:1:exon
so has part: feature:3645626-3645699:1:exon
so has part: feature:3647598-3647667:1:exon
so has part: feature:3648299-3648426:1:exon
so has part: feature:3649603-3649714:1:exon
so has part: feature:3655280-3655445:1:exon
so has part: feature:3656388-3656515:1:exon
so has part: feature:3657345-3657422:1:exon
so has part: feature:3659846-3659934:1:exon
so has part: feature:3664931-3664975:1:exon
so has part: feature:3667047-3667122:1:exon
so has part: feature:3669555-3669660:1:exon
so has part: feature:3670017-3670099:1:exon
so has part: feature:3672810-3672859:1:exon
so has part: feature:3673808-3673877:1:exon
so has part: feature:3675490-3675574:1:exon
so has part: feature:3676618-3676757:1:exon
so has part: feature:3677965-3678103:1:exon
so has part: feature:3688245-3688309:1:exon
so has part: feature:3772622-3772794:1:exon
so has part: feature:3842546-3842729:1:exon
so has part: feature:3846663-3846773:1:exon
so has part: feature:3903516-3903590:1:exon
so has part: feature:3910530-3910652:1:exon
so has part: feature:3912628-3912706:1:exon
so has part: feature:3928016-3928077:1:exon
so has part: feature:3928745-3928801:1:exon
so has part: feature:3930368-3930475:1:exon
so has part: feature:4002102-4002190:1:exon
so has part: feature:4008629-4008733:1:exon
so has part: feature:4043292-4043383:1:exon
so has part: feature:4054121-4054218:1:exon

XP_036687932.1
type: Protein
SIO_000068: ncbiprotein

position:3527788:1
position: 3527788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4054218:1
position: 4054218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3527788-3527827:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3606740-3606884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3638482-3638581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3639048-3639146:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3640057-3640102:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3641150-3641190:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3645626-3645699:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3647598-3647667:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3648299-3648426:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3649603-3649714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3655280-3655445:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3656388-3656515:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3657345-3657422:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3659846-3659934:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3664931-3664975:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3667047-3667122:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3669555-3669660:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3670017-3670099:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3672810-3672859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3673808-3673877:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3675490-3675574:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3676618-3676757:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3677965-3678103:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3688245-3688309:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3772622-3772794:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3842546-3842729:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3846663-3846773:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3903516-3903590:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3910530-3910652:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3912628-3912706:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3928016-3928077:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3928745-3928801:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:3930368-3930475:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4002102-4002190:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4008629-4008733:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4043292-4043383:1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:4054121-4054218:1:exon

LOC118884388
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: LOC118884388
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phospholipid-transporting ATPase IB isoform X2
translation: MSRATSVGDLLDAPARTIYLNQPHLNKFRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVVNGQCLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGVSHTADMQVREVLMKLSGSIECEGPNRHLYDFTGNLNLDGKSPVALGPDQILLRGTQLRNTQWVFGIVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALYWNGSQGGKNWYIKKMDTSSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYLGNDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELTREPSSDDFCQIPPPPSDSCDFDDPRLLKNIEDHHPTAPCIQEFLTLLAVCHTVVPEKDRDNIIYQASSPDEAALVKGARKLGFVFTARTPYSVIIEAMGQEETFGILNVLEFSSDRKRMSVIVRTPSGQLRLYCKGADNVIFERLSKDSKYMQETLCHLEYFATEGLRTLCVAYADLSESDYAEWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKEDSLDATRAAITQHCADLGSLLGKENDAALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVEVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCSQESMLRFPQLYRITQNAEGFNTKVFWGHCINALVHSLILFWFPMKALEHDTVLANGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLIWLVFFGIYSTIWPTIPIAPDMKGQATMVLSSAHFWLGLFLVPTACLMEDVVWRAAKHTCKKTLLEEVQELERKSRVMGRAVLRDSDGKRTNERDRLLKRLGRKTPPTHFRGGSLQQSVPHGYAFSQEEHGAVTQEEIVRAYDTTKQKSRKK
SIO_010081: LOC118884388
subclass of: SO_0000673
so part of: LOC118884388
location: join(3606784..3606884,3638482..3638581,3639048..3639146,3640057..3640102,3641150..3641190,3645626..3645699,3647598..3647667,3648299..3648426,3649603..3649714,3655280..3655445,3656388..3656515,3657345..3657422,3659846..3659934,3664931..3664975,3667047..3667122,3669555..3669660,3670017..3670099,3672810..3672859,3673808..3673877,3675490..3675574,3676618..3676757,3677965..3678103,3688245..3688309,3772622..3772794,3842546..3842729,3846663..3846773,3903516..3903590,3910530..3910652,3912628..3912706,3928016..3928077,3928745..3928801,3930368..3930475,4002102..4002190,4008629..4008733,4043292..4043383,4054121..4054218)
location: region:3606784-4054218:1
so has part: feature:3606784-3606884:1:exon
so has part: feature:3638482-3638581:1:exon
so has part: feature:3639048-3639146:1:exon
so has part: feature:3640057-3640102:1:exon
so has part: feature:3641150-3641190:1:exon
so has part: feature:3645626-3645699:1:exon
so has part: feature:3647598-3647667:1:exon
so has part: feature:3648299-3648426:1:exon
so has part: feature:3649603-3649714:1:exon
so has part: feature:3655280-3655445:1:exon
so has part: feature:3656388-3656515:1:exon
so has part: feature:3657345-3657422:1:exon
so has part: feature:3659846-3659934:1:exon
so has part: feature:3664931-3664975:1:exon
so has part: feature:3667047-3667122:1:exon
so has part: feature:3669555-3669660:1:exon
so has part: feature:3670017-3670099:1:exon
so has part: feature:3672810-3672859:1:exon
so has part: feature:3673808-3673877:1:exon
so has part: feature:3675490-3675574:1:exon
so has part: feature:3676618-3676757:1:exon
so has part: feature:3677965-3678103:1:exon
so has part: feature:3688245-3688309:1:exon
so has part: feature:3772622-3772794:1:exon
so has part: feature:3842546-3842729:1:exon
so has part: feature:3846663-3846773:1:exon
so has part: feature:3903516-3903590:1:exon
so has part: feature:3910530-3910652:1:exon
so has part: feature:3912628-3912706:1:exon
so has part: feature:3928016-3928077:1:exon
so has part: feature:3928745-3928801:1:exon
so has part: feature:3930368-3930475:1:exon
so has part: feature:4002102-4002190:1:exon
so has part: feature:4008629-4008733:1:exon
so has part: feature:4043292-4043383:1:exon
so has part: feature:4054121-4054218:1:exon

XP_036687933.1
type: Protein
SIO_000068: ncbiprotein

position:3606784:1
position: 3606784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3606784-3606884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3638482-3638581:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3639048-3639146:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3640057-3640102:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3641150-3641190:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3645626-3645699:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3647598-3647667:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3648299-3648426:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3649603-3649714:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3655280-3655445:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3656388-3656515:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3657345-3657422:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3659846-3659934:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3664931-3664975:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3667047-3667122:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3669555-3669660:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3670017-3670099:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3672810-3672859:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3673808-3673877:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3675490-3675574:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3676618-3676757:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3677965-3678103:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3688245-3688309:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:3772622-3772794:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:3842546-3842729:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:3846663-3846773:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:3903516-3903590:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:3910530-3910652:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:3912628-3912706:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:3928016-3928077:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:3928745-3928801:1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:3930368-3930475:1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:4002102-4002190:1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:4008629-4008733:1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:4043292-4043383:1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:4054121-4054218:1:exon

LOC118884389
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884389
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4006547..4023211)
location: region:4006547-4023211:-1
so has part: feature:4006547-4023211:-1:exon
subclass of: SO_0000011

118884389
type: Gene
SIO_000068: ncbigene

position:4006547:-1
position: 4006547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023211:-1
position: 4023211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4006547-4023211:-1:exon

LOC118884389
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9771
nc RNA class: lncRNA
gene: LOC118884389
product: uncharacterized LOC118884389
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005017269.1
SIO_010081: LOC118884389
subclass of: SO_0000673
so part of: LOC118884389
location: complement(join(4006547..4006559,4021456..4021458,4023139..4023211))
location: region:4006547-4023211:-1
so has part: feature:4023139-4023211:-1:exon
so has part: feature:4021456-4021458:-1:exon
so has part: feature:4006547-4006559:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4023139-4023211:-1:exon

position:4023139:-1
position: 4023139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4021456-4021458:-1:exon

position:4021456:-1
position: 4021456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021458:-1
position: 4021458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4006547-4006559:-1:exon

position:4006559:-1
position: 4006559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHISA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4076846..4082548)
location: region:4076846-4082548:-1
so has part: feature:4076846-4082548:-1:exon
subclass of: SO_0000010

118884007
type: Gene
SIO_000068: ncbigene

position:4076846:-1
position: 4076846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4082548:-1
position: 4082548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4076846-4082548:-1:exon

SHISA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: SHISA2
product: shisa family member 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_036831269.1
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: complement(join(4076846..4079052,4082034..4082548))
location: region:4076846-4082548:-1
so has part: feature:4082034-4082548:-1:exon
so has part: feature:4076846-4079052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4082034-4082548:-1:exon

position:4082034:-1
position: 4082034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4076846-4079052:-1:exon

position:4079052:-1
position: 4079052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SHISA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9771
gene: SHISA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein shisa-2 homolog
translation: MWGGRRPAASSRDAASLLRLLLAALLAAGARASGEYCHGWLDAQGVWRIGFQCPERFDGGDATICCGSCALRYCCSSAEARLDQGGCDNDRQQGAGEPGRADKDGPDGSAVPIYVPFLIVGSVFVAFIILGSLVAACCCRCLRPKQEPQQSRAPGGPRMVETIPMIPSASTSRSSSSRQSSTAASSSSSANSGARGPPTRSQTNCCLPEGTMNNVYVNMPTNFSVLNCQQATQIVPHQGQYLHPPFVGYTVQHDSVPMTPVPPFLDGLQTGYRQIQAPFPHTNSEQKMYPAVTV
SIO_010081: SHISA2
subclass of: SO_0000673
so part of: SHISA2
location: complement(join(4078499..4079052,4082034..4082364))
location: region:4078499-4082364:-1
so has part: feature:4082034-4082364:-1:exon
so has part: feature:4078499-4079052:-1:exon

XP_036687164.1
type: Protein
SIO_000068: ncbiprotein

position:4078499:-1
position: 4078499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4082364:-1
position: 4082364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4082034-4082364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4078499-4079052:-1:exon

LOC118884006
type: Gene
subclass of: SO_0000704
RO_0002162: 9771
gene: LOC118884006
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4083726..4183034)
location: region:4083726-4183034:-1
so has part: feature:4083726-4183034:-1:exon
subclass of: SO_0000010

118884006
type: Gene
SIO_000068: ncbigene

position:4083726:-1
position: 4083726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183034:-1
position: 4183034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4083726-4183034:-1:exon

LOC118884006
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9771
gene: LOC118884006
product: phospholipid-transporting ATPase IB-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_036831265.1
SIO_010081: LOC118884006
subclass of: SO_0000673
so part of: LOC118884006
location: complement(join(4083726..4083782,4084539..4084617,4090453..4090715,4094819..4094927,4107557..4107683,4120130..4120208,4121405..4121527,4132858..4132963,4137232..4137392,4141068..4141262,4142808..4142980,4149040..4149105,4149722..4150174,4155165..4155303,4162344..4162428,4165036..4165105,4168155..4168204,4170021..4170103,4170677..4170782,4171795..4171870,4172323..4172364,4172641..4172729,4175310..4175387,4176416..4176543,4182553..4183034))
location: region:4083726-4183034:-1
so has part: feature:4182553-4183034:-1:exon
so has part: feature:4176416-4176543:-1:exon
so has part: feature:4175310-4175387:-1:exon
so has part: feature:4172641-4172729:-1:exon
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so has part: feature:4137232-4137392:-1:exon
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so has part: feature:4107557-4107683:-1:exon
so has part: feature:4094819-4094927:-1:exon
so has part: feature:4090453-4090715:-1:exon
so has part: feature:4084539-4084617:-1:exon
so has part: feature:4083726-4083782:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4182553-4183034:-1:exon

position:4182553:-1
position: 4182553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4176416-4176543:-1:exon

position:4176416:-1
position: 4176416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4176543:-1
position: 4176543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4175310-4175387:-1:exon