Tursiops truncatus isolate mTurTru1 chromosome 21, mTurTru1.mat.Y, whole genome shotgun sequence.
type: Entry
definition: Tursiops truncatus isolate mTurTru1 chromosome 21, mTurTru1.mat.Y, whole genome shotgun sequence.
sequence version: NC_047054.1
sequence date: 2020-04-27
sequence: sequence
division: CON
label: NC_047054.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA625792
dblink: SAMN12326775
keyword: WGS
keyword: RefSeq
source: Tursiops truncatus (common bottlenose dolphin)
organism: Tursiops truncatus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022294.1.\nAssembly name: mTurTru1.mat.Y\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2020/03/27. The original whole-genome shotgun project has the\naccession JAAOMD000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 15-JAN-2020\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve v.\n 3.2.1_04122018; Salsa2 HiC v. 2.2; Arrow\n polishing and gap filling v.\n smrtlink_6.0.0.47841; Freebayes v. 1.3.1;\n gEVAL manual curation v. 2020-01-15; VGP\n trio assembly pipeline v. 1.6\nAssembly Name :: mTurTru1.mat.Y\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 63.7x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Tursiops truncatus Annotation\n Release 102\nAnnotation Version :: 102\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 35682248
topology: linear
so has quality: SO_0000987
location: 1..35682248
location: region:1-35682248:1
RO_0002162: 9739

NC_047054
type: RefSeq
SIO_000068: refseq

PRJNA625792
type: BioProject
SIO_000068: bioproject

SAMN12326775
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35682248:1
position: 35682248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-35682248:1:source
so part of: sequence
organism: Tursiops truncatus
mol type: genomic DNA
isolate: mTurTru1
chromosome: 21
sex: male
tissue type: spleen
country: USA: Baltimore, Maryland
lat lon: 39.2851 N 76.6083 W
collection date: 11-Nov-2018
collected by: Leigh Clayton, Jill Arnold, Winston Timp, Norah Hilger

9739
type: Taxonomy
SIO_000068: taxonomy

DCTD
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: DCTD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 101762..129421
location: region:101762-129421:1
so has part: feature:101762-129421:1:exon
subclass of: SO_0000010

101335102
type: Gene
SIO_000068: ncbigene

position:101762:1
position: 101762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129421:1
position: 129421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101762-129421:1:exon

DCTD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: DCTD
product: dCMP deaminase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_019921459.2
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(101762..101892,103686..103800,104385..104520,123620..123736,125306..125402,127335..129421)
location: region:101762-129421:1
so has part: feature:101762-101892:1:exon
so has part: feature:103686-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-129421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101762-101892:1:exon

position:101892:1
position: 101892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103686-103800:1:exon

position:103686:1
position: 103686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:103800:1
position: 103800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:104385-104520:1:exon

position:104385:1
position: 104385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:104520:1
position: 104520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:123620-123736:1:exon

position:123620:1
position: 123620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:123736:1
position: 123736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:125306-125402:1:exon

position:125306:1
position: 125306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:125402:1
position: 125402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:127335-129421:1:exon

position:127335:1
position: 127335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DCTD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: DCTD
product: dCMP deaminase, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_019921464.2
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(101949..102176,103686..103800,104385..104520,123620..123736,125306..125402,127335..129421)
location: region:101949-129421:1
so has part: feature:101949-102176:1:exon
so has part: feature:103686-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-129421:1:exon

position:101949:1
position: 101949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101949-102176:1:exon

position:102176:1
position: 102176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103686-103800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127335-129421:1:exon

DCTD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: DCTD
product: dCMP deaminase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_019921463.2
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(102197..102488,103686..103800,104385..104520,123620..123736,125306..125402,127335..129421)
location: region:102197-129421:1
so has part: feature:102197-102488:1:exon
so has part: feature:103686-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-129421:1:exon

position:102197:1
position: 102197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102197-102488:1:exon

position:102488:1
position: 102488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103686-103800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127335-129421:1:exon

DCTD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: DCTD
product: dCMP deaminase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_019921458.2
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(102378..102491,103686..103800,104385..104520,123620..123736,125306..125402,127335..129421)
location: region:102378-129421:1
so has part: feature:102378-102491:1:exon
so has part: feature:103686-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-129421:1:exon

position:102378:1
position: 102378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102378-102491:1:exon

position:102491:1
position: 102491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:103686-103800:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:127335-129421:1:exon

DCTD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: DCTD
product: dCMP deaminase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 177 samples with support for all annotated introns
transcript id: XM_004318072.3
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(102501..103800,104385..104520,123620..123736,125306..125402,127335..129421)
location: region:102501-129421:1
so has part: feature:102501-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-129421:1:exon

position:102501:1
position: 102501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:102501-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127335-129421:1:exon

DCTD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: DCTD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxycytidylate deaminase isoform X2
translation: MCLPTAILLCFSSRPSMSECPCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETRAARLMLEMAGVSFRKFTPKCSQIVIDFDSINSRPSQKLQ
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(103645..103800,104385..104520,123620..123736,125306..125402,127335..127413)
location: region:103645-127413:1
so has part: feature:103645-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-127413:1:exon

XP_004318120.3
type: Protein
SIO_000068: ncbiprotein

position:103645:1
position: 103645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127413:1
position: 127413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103645-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127335-127413:1:exon

DCTD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: DCTD
product: dCMP deaminase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_019921457.2
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(103686..103800,104385..104520,123620..123736,127335..129421)
location: region:103686-129421:1
so has part: feature:103686-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:127335-129421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:103686-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127335-129421:1:exon

DCTD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: DCTD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxycytidylate deaminase isoform X1
translation: MSECPCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGNSHQSAARLSLTLIQLTADRVRSSSDLHLIKSPEDRIILF
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(103693..103800,104385..104520,123620..123736,127335..127459)
location: region:103693-127459:1
so has part: feature:103693-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:127335-127459:1:exon

XP_019777016.2
type: Protein
SIO_000068: ncbiprotein

position:103693:1
position: 103693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127459:1
position: 127459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:103693-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:127335-127459:1:exon

DCTD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: DCTD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxycytidylate deaminase isoform X3
translation: MSECPCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETRAARLMLEMAGVSFRKFTPKCSQIVIDFDSINSRPSQKLQ
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(103693..103800,104385..104520,123620..123736,125306..125402,127335..127413)
location: region:103693-127413:1
so has part: feature:103693-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-127413:1:exon

XP_019777017.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103693-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127335-127413:1:exon

DCTD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: DCTD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxycytidylate deaminase isoform X3
translation: MSECPCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETRAARLMLEMAGVSFRKFTPKCSQIVIDFDSINSRPSQKLQ
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(103693..103800,104385..104520,123620..123736,125306..125402,127335..127413)
location: region:103693-127413:1
so has part: feature:103693-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-127413:1:exon

XP_019777018.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103693-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127335-127413:1:exon

DCTD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: DCTD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxycytidylate deaminase isoform X3
translation: MSECPCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETRAARLMLEMAGVSFRKFTPKCSQIVIDFDSINSRPSQKLQ
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(103693..103800,104385..104520,123620..123736,125306..125402,127335..127413)
location: region:103693-127413:1
so has part: feature:103693-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-127413:1:exon

XP_019777022.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103693-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127335-127413:1:exon

DCTD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: DCTD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: deoxycytidylate deaminase isoform X3
translation: MSECPCKKRDDYLEWPEYFMAVAFLSAQRSKDPNSQVGACIVNAENKIVGIGYNGMPNGCSDDLLPWRRTAESILDTKYPYVCHAELNAIMNKNSADVKGCTMYVALFPCNECAKLIIQAGIKEVIFMSDKYHDSNETRAARLMLEMAGVSFRKFTPKCSQIVIDFDSINSRPSQKLQ
SIO_010081: DCTD
subclass of: SO_0000673
so part of: DCTD
location: join(103693..103800,104385..104520,123620..123736,125306..125402,127335..127413)
location: region:103693-127413:1
so has part: feature:103693-103800:1:exon
so has part: feature:104385-104520:1:exon
so has part: feature:123620-123736:1:exon
so has part: feature:125306-125402:1:exon
so has part: feature:127335-127413:1:exon

XP_019777023.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:103693-103800:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:104385-104520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:123620-123736:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:125306-125402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:127335-127413:1:exon

TENM3
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: TENM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(180888..616490)
location: region:180888-616490:-1
so has part: feature:180888-616490:-1:exon
subclass of: SO_0000010

101335389
type: Gene
SIO_000068: ncbigene

position:180888:-1
position: 180888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616490:-1
position: 616490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:180888-616490:-1:exon

TENM3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: TENM3
product: teneurin transmembrane protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 5 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019921636.2
SIO_010081: TENM3
subclass of: SO_0000673
so part of: TENM3
location: complement(join(180888..182473,184524..184654,188733..190344,194500..194796,202474..202709,204483..204658,220596..221470,222263..222417,223690..223922,233961..234210,238163..238306,239863..240130,243584..243845,244643..244762,245771..245987,259073..259219,283196..283381,289889..290089,291176..291370,291571..291672,292099..292309,297619..297833,313378..313500,337097..337335,362256..362493,589682..589960,616190..616490))
location: region:180888-616490:-1
so has part: feature:616190-616490:-1:exon
so has part: feature:589682-589960:-1:exon
so has part: feature:362256-362493:-1:exon
so has part: feature:337097-337335:-1:exon
so has part: feature:313378-313500:-1:exon
so has part: feature:297619-297833:-1:exon
so has part: feature:292099-292309:-1:exon
so has part: feature:291571-291672:-1:exon
so has part: feature:291176-291370:-1:exon
so has part: feature:289889-290089:-1:exon
so has part: feature:283196-283381:-1:exon
so has part: feature:259073-259219:-1:exon
so has part: feature:245771-245987:-1:exon
so has part: feature:244643-244762:-1:exon
so has part: feature:243584-243845:-1:exon
so has part: feature:239863-240130:-1:exon
so has part: feature:238163-238306:-1:exon
so has part: feature:233961-234210:-1:exon
so has part: feature:223690-223922:-1:exon
so has part: feature:222263-222417:-1:exon
so has part: feature:220596-221470:-1:exon
so has part: feature:204483-204658:-1:exon
so has part: feature:202474-202709:-1:exon
so has part: feature:194500-194796:-1:exon
so has part: feature:188733-190344:-1:exon
so has part: feature:184524-184654:-1:exon
so has part: feature:180888-182473:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:616190-616490:-1:exon

position:616190:-1
position: 616190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:589682-589960:-1:exon

position:589682:-1
position: 589682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589960:-1
position: 589960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362256-362493:-1:exon

position:362256:-1
position: 362256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362493:-1
position: 362493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:337097-337335:-1:exon

position:337097:-1
position: 337097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337335:-1
position: 337335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:313378-313500:-1:exon

position:313378:-1
position: 313378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313500:-1
position: 313500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:297619-297833:-1:exon

position:297619:-1
position: 297619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297833:-1
position: 297833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:292099-292309:-1:exon

position:292099:-1
position: 292099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:292309:-1
position: 292309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:291571-291672:-1:exon

position:291571:-1
position: 291571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291672:-1
position: 291672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:291176-291370:-1:exon

position:291176:-1
position: 291176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:291370:-1
position: 291370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:289889-290089:-1:exon

position:289889:-1
position: 289889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:290089:-1
position: 290089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:283196-283381:-1:exon

position:283196:-1
position: 283196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:283381:-1
position: 283381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:259073-259219:-1:exon

position:259073:-1
position: 259073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:259219:-1
position: 259219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:245771-245987:-1:exon

position:245771:-1
position: 245771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245987:-1
position: 245987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:244643-244762:-1:exon

position:244643:-1
position: 244643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:244762:-1
position: 244762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:243584-243845:-1:exon

position:243584:-1
position: 243584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:243845:-1
position: 243845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:239863-240130:-1:exon

position:239863:-1
position: 239863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:240130:-1
position: 240130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:238163-238306:-1:exon

position:238163:-1
position: 238163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:238306:-1
position: 238306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:233961-234210:-1:exon

position:233961:-1
position: 233961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234210:-1
position: 234210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:223690-223922:-1:exon

position:223690:-1
position: 223690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:223922:-1
position: 223922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:222263-222417:-1:exon

position:222263:-1
position: 222263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:222417:-1
position: 222417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:220596-221470:-1:exon

position:220596:-1
position: 220596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:221470:-1
position: 221470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:204483-204658:-1:exon

position:204483:-1
position: 204483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:204658:-1
position: 204658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:202474-202709:-1:exon

position:202474:-1
position: 202474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202709:-1
position: 202709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:194500-194796:-1:exon

position:194500:-1
position: 194500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:194796:-1
position: 194796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:188733-190344:-1:exon

position:188733:-1
position: 188733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:190344:-1
position: 190344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:184524-184654:-1:exon

position:184524:-1
position: 184524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:184654:-1
position: 184654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:180888-182473:-1:exon

position:182473:-1
position: 182473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TENM3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: TENM3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: teneurin-3
translation: MDVKERRPYCSLTKNRREKERRYTNSSADSAECRVPTQKSYSSSETLKAFDHDSSRLLYGNRVKDLVHREADEFTRQGQNFTLRQLGVCEPEARRGLTFCAEMGLPHRGYSISAGSDADTENEAVMSPEHAMRLWGRGVKSGRSSCLSSRSNSALTLTDTEHENKSDSENEQPANNQGQSTLQPLPPSHKQHSAQHHPSITSLNRNSLTNRRNQSPAPPAALPAELQTTPESVQLQDSWVLGSNVPLESRHFLFKTGTGTTPLFSTATPGYTMASGSVYSPPTRPLPRNTLSRSAFKFKKSSKYCSWKCTALCAVGVSVLLAILLSYFIAMHLFGLNWQLQQTENDTFENGKVNSDTMPTNTVSLPSGDNGKLGGFTQENNTIDSGELDIGRRAIQEVPPGIFWRSQLFIDQPQFLKFNISLQKDALIGVYGRKGLPPSHTQYDFVELLDGSRLIAREQRNLLESERAGRQARSVSLHEAGFIQYLDSGIWHLAFYNDGKSAEQVSFNTIVIESVVECPRNCHGNGECVSGTCHCFPGFLGPDCSRAACPVLCSGNGQYSKGRCLCFSGWKGTECDVPNTQCIDPQCGGRGICIVGSCVCNSGYKGENCEEADCLDPGCSNHGVCIHGECHCNPGWGGNNCEILKTMCPDQCSGHGTYLQERGSCTCDPNWTGPDCSNEICSADCGSHGVCMGGACRCEEGWTGPACSQRACHPRCAEHGTCRDGKCECSQGWNGEHCTIEGCPGLCNSNGRCTLDQNGWHCVCQPGWRGAGCDVAMETLCTDSKDNEGDGLIDCMDPDCCLQSSCQNQPYCRGLPDPQDIISQSLQSPSQQAAKPFYDRISFLIGSDSTHVIPGDSPFNKSLASVIRGQVLTADGTPLIGVNVSFFHYPEYGYTITRQDGMFDLVANGGASLTLVFERSPFLTQYHTVWIPWNVFYVMDTLVMKKEENDIPSCDLSGFVRPNPIIVSSPLSTFFRSSPEDSPIIPETQVLHEETTIPGTDLKLSYLSSRAAGYKSVLKITMTQSVIPFNLMKVHLMVAVVGRLFQKWFPASPNLAYTFIWDKTDAYNQKVYGLSEAVVSVGYEYESCLDLTLWEKRTAILQGYELDASNMGGWTLNKHHVLDVQNGILYKGNGENQFISQQPPVVSSIMGNGRRRSISCPSCNGPADGNKLLAPVALACGIDGSLYVGDFNYVRRMLPSGNVTSVLELSSSPAHRYYLATDPVSGDLYVSDTNTRRIYRPKSLTGAKDLTKNAEVVAGTGEQCLPFDEARCGDGGKAVEATLMSPKGMAIDKNGLIYFVDGTMIRKVDQNGIISTLLGSNDLTSARPLTCDTSMHISQVRLEWPTDLAINPMDNSIYVLDNNVVLQITENRQVRIAAGRPMHCQVPGVEYSVGKHAVQTTLESATAIAVSYSGVLYITETDEKKINRIRQVTTDGEISLVAGIPSECDCKNDANCDCYQSGDGYAKDAKLSAPSSLAASPDGTLYIADLGNIRIRAVSKNKPLLNSMNFYEVASPTDQELYIFDVNGTHQYTVSLVTGDYLYNFSYSNDNDITAVTDSNGNTLRIRRDPNRMPVRVVSPDNQVIWLTIGTNGCLKSMTAQGLELVLFTYHGNSGLLATKSDETGWTTFFDYDSEGRLTNVTFPTGVVTNLHGDMDKAITVDLESSSREEGVSITSNLSSIDSFYTVVQDQLRNSYQVGYDGSLRILYASGLDSHYQTEPHVLAGTANPTVAKRNMTLPGENGQNLVEWRFRKEQAQGKVNVFGRKLRVNGRNLLSVDFDRTTKTEKIYDDHRKFLLRIAYDTSGHPTLWLPSSKLMAVNVTYSPTGQVASVQRGTTSEKVDYDGQGRIVSRVFADGKTWSYTYLEKSMVLLLHSQRQYIFEYDMWDQLSAITMPSVARHTMQTIRSIGYYRNIYNPPESNASVITDYNEGGLLLQTAFLGTSRRVLFKYRRQTRLSEILYDSTRVSFTYDESAGVLKTVNLQSDGFICTIRYRQIGPLV…
SIO_010081: TENM3
subclass of: SO_0000673
so part of: TENM3
location: complement(join(181718..182473,184524..184654,188733..190344,194500..194796,202474..202709,204483..204658,220596..221470,222263..222417,223690..223922,233961..234210,238163..238306,239863..240130,243584..243845,244643..244762,245771..245987,259073..259219,283196..283381,289889..290089,291176..291370,291571..291672,292099..292309,297619..297833,313378..313500,337097..337335,362256..362493,589682..589960,616190..616421))
location: region:181718-616421:-1
so has part: feature:616190-616421:-1:exon
so has part: feature:589682-589960:-1:exon
so has part: feature:362256-362493:-1:exon
so has part: feature:337097-337335:-1:exon
so has part: feature:313378-313500:-1:exon
so has part: feature:297619-297833:-1:exon
so has part: feature:292099-292309:-1:exon
so has part: feature:291571-291672:-1:exon
so has part: feature:291176-291370:-1:exon
so has part: feature:289889-290089:-1:exon
so has part: feature:283196-283381:-1:exon
so has part: feature:259073-259219:-1:exon
so has part: feature:245771-245987:-1:exon
so has part: feature:244643-244762:-1:exon
so has part: feature:243584-243845:-1:exon
so has part: feature:239863-240130:-1:exon
so has part: feature:238163-238306:-1:exon
so has part: feature:233961-234210:-1:exon
so has part: feature:223690-223922:-1:exon
so has part: feature:222263-222417:-1:exon
so has part: feature:220596-221470:-1:exon
so has part: feature:204483-204658:-1:exon
so has part: feature:202474-202709:-1:exon
so has part: feature:194500-194796:-1:exon
so has part: feature:188733-190344:-1:exon
so has part: feature:184524-184654:-1:exon
so has part: feature:181718-182473:-1:exon

XP_019777195.1
type: Protein
SIO_000068: ncbiprotein

position:181718:-1
position: 181718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616421:-1
position: 616421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:616190-616421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:589682-589960:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:362256-362493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:337097-337335:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:313378-313500:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:297619-297833:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:292099-292309:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:291571-291672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:291176-291370:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:289889-290089:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:283196-283381:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:259073-259219:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:245771-245987:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:244643-244762:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:243584-243845:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:239863-240130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:238163-238306:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:233961-234210:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:223690-223922:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:222263-222417:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:220596-221470:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:204483-204658:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:202474-202709:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:194500-194796:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:188733-190344:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:184524-184654:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:181718-182473:-1:exon

LOC117310076
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310076
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(3276111..3276231)
location: region:3276111-3276231:-1
so has part: feature:3276111-3276231:-1:exon
subclass of: SO_0000578

117310076
type: Gene
SIO_000068: ncbigene

position:3276111:-1
position: 3276111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3276231:-1
position: 3276231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3276111-3276231:-1:exon

LOC117310076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: snoRNA
gene: LOC117310076
product: small nucleolar RNA SNORD22
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00099
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004524333.1
SIO_010081: LOC117310076
subclass of: SO_0000673
so part of: LOC117310076
location: complement(3276111..3276231)
location: region:3276111-3276231:-1
so has part: feature:3276111-3276231:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3276111-3276231:-1:exon

LOC109547640
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC109547640
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4149105..4192746
location: region:4149105-4192746:1
so has part: feature:4149105-4192746:1:exon
subclass of: SO_0000011

109547640
type: Gene
SIO_000068: ncbigene

position:4149105:1
position: 4149105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4192746:1
position: 4192746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4149105-4192746:1:exon

LOC109547640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547640
product: uncharacterized LOC109547640, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_002173477.2
SIO_010081: LOC109547640
subclass of: SO_0000673
so part of: LOC109547640
location: join(4149105..4149253,4150091..4150166,4192669..4192746)
location: region:4149105-4192746:1
so has part: feature:4149105-4149253:1:exon
so has part: feature:4150091-4150166:1:exon
so has part: feature:4192669-4192746:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4149105-4149253:1:exon

position:4149253:1
position: 4149253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4150091-4150166:1:exon

position:4150091:1
position: 4150091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4150166:1
position: 4150166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4192669-4192746:1:exon

position:4192669:1
position: 4192669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109547640
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547640
product: uncharacterized LOC109547640, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002173476.2
SIO_010081: LOC109547640
subclass of: SO_0000673
so part of: LOC109547640
location: join(4149105..4149253,4150091..4150166,4190395..4190559)
location: region:4149105-4190559:1
so has part: feature:4149105-4149253:1:exon
so has part: feature:4150091-4150166:1:exon
so has part: feature:4190395-4190559:1:exon

position:4190559:1
position: 4190559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4149105-4149253:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4150091-4150166:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4190395-4190559:1:exon

position:4190395:1
position: 4190395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117309964
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117309964
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4678853..4679442)
location: region:4678853-4679442:-1
so has part: feature:4678853-4679442:-1:exon
subclass of: SO_0000011

117309964
type: Gene
SIO_000068: ncbigene

position:4678853:-1
position: 4678853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4679442:-1
position: 4679442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4678853-4679442:-1:exon

LOC117309964
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117309964
product: uncharacterized LOC117309964
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_004524234.1
SIO_010081: LOC117309964
subclass of: SO_0000673
so part of: LOC117309964
location: complement(join(4678853..4679052,4679296..4679442))
location: region:4678853-4679442:-1
so has part: feature:4679296-4679442:-1:exon
so has part: feature:4678853-4679052:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4679296-4679442:-1:exon

position:4679296:-1
position: 4679296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4678853-4679052:-1:exon

position:4679052:-1
position: 4679052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AGA
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: AGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4679535..4690499
location: region:4679535-4690499:1
so has part: feature:4679535-4690499:1:exon
subclass of: SO_0000010

101317966
type: Gene
SIO_000068: ncbigene

position:4679535:1
position: 4679535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4690499:1
position: 4690499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4679535-4690499:1:exon

AGA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGA
product: aspartylglucosaminidase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XM_019921481.2
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: join(4679535..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687081..4687188,4687893..4688026,4689149..4690499)
location: region:4679535-4690499:1
so has part: feature:4679535-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687081-4687188:1:exon
so has part: feature:4687893-4688026:1:exon
so has part: feature:4689149-4690499:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4679535-4679714:1:exon

position:4679714:1
position: 4679714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

position:4681583:1
position: 4681583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4681736:1
position: 4681736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

position:4683040:1
position: 4683040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4683152:1
position: 4683152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

position:4684068:1
position: 4684068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4684180:1
position: 4684180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

position:4685414:1
position: 4685414
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4685528:1
position: 4685528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

position:4686163:1
position: 4686163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4686238:1
position: 4686238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4687081-4687188:1:exon

position:4687081:1
position: 4687081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4687188:1
position: 4687188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4687893-4688026:1:exon

position:4687893:1
position: 4687893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4688026:1
position: 4688026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4689149-4690499:1:exon

position:4689149:1
position: 4689149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: AGA
product: aspartylglucosaminidase, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 130 samples with support for all annotated introns
transcript id: XR_002173569.2
SIO_010081: AGA
so part of: AGA
location: join(4679535..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687081..4687188,4687893..4688026,4689149..4689332,4689436..4689515)
location: region:4679535-4689515:1
so has part: feature:4679535-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687081-4687188:1:exon
so has part: feature:4687893-4688026:1:exon
so has part: feature:4689149-4689332:1:exon
so has part: feature:4689436-4689515:1:exon

position:4689515:1
position: 4689515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4679535-4679714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4687081-4687188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4687893-4688026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689149-4689332:1:exon

position:4689332:1
position: 4689332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4689436-4689515:1:exon

position:4689436:1
position: 4689436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AGA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: AGA
product: aspartylglucosaminidase, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XR_002173570.2
SIO_010081: AGA
so part of: AGA
location: join(4679536..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687081..4687188,4687893..4688638,4689149..4690499)
location: region:4679536-4690499:1
so has part: feature:4679536-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687081-4687188:1:exon
so has part: feature:4687893-4688638:1:exon
so has part: feature:4689149-4690499:1:exon

position:4679536:1
position: 4679536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4679536-4679714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4687081-4687188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4687893-4688638:1:exon

position:4688638:1
position: 4688638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4689149-4690499:1:exon

AGA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGA
product: aspartylglucosaminidase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 151 samples with support for all annotated introns
transcript id: XM_004324445.3
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: join(4679537..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687081..4687188,4687893..4688026,4689436..4690499)
location: region:4679537-4690499:1
so has part: feature:4679537-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687081-4687188:1:exon
so has part: feature:4687893-4688026:1:exon
so has part: feature:4689436-4690499:1:exon

position:4679537:1
position: 4679537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4679537-4679714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4687081-4687188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4687893-4688026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689436-4690499:1:exon

AGA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGA
product: aspartylglucosaminidase, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 155 samples with support for all annotated introns
transcript id: XM_019921482.2
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: join(4679538..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687893..4688026,4689436..4690499)
location: region:4679538-4690499:1
so has part: feature:4679538-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687893-4688026:1:exon
so has part: feature:4689436-4690499:1:exon

position:4679538:1
position: 4679538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4679538-4679714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4687893-4688026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4689436-4690499:1:exon

AGA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X1
translation: MARKPNHRLLLLSLLLLCQAPVCSSGPLPLILNTWPFRNAAVAAWRTLASGGSALDAVESGCAACEQEQCDGTVGFGGSPDESGETTLDAMIMDGTTMNVGAVGDLRRIKNAIGVARKVLEHTTHTLLAGESATKFAESMGFINEDLSTNASCALHSDWLAWNCQPNYWRNVIPDASKYCGPYKPPSILKRDGSTYKETGDSYGHDTIGMVVIHKMGNIAAGTSTNGIKFKIPGRIGDSPIPGSGAYADDTAGAAAATGDGDILMRFLPSYQAVEYMRRGEDPTTACRKVISRIQKYFPNFFGAVVCANVTGSYGAACNKLSTFTQFHFMVYNPLKSEPTEEKVDCI
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: join(4679585..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687081..4687188,4687893..4688026,4689436..4689536)
location: region:4679585-4689536:1
so has part: feature:4679585-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687081-4687188:1:exon
so has part: feature:4687893-4688026:1:exon
so has part: feature:4689436-4689536:1:exon

XP_004324493.2
type: Protein
SIO_000068: ncbiprotein

position:4679585:1
position: 4679585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4689536:1
position: 4689536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4679585-4679714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4687081-4687188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4687893-4688026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689436-4689536:1:exon

AGA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X3
translation: MARKPNHRLLLLSLLLLCQAPVCSSGPLPLILNTWPFRNAAVAAWRTLASGGSALDAVESGCAACEQEQCDGTVGFGGSPDESGETTLDAMIMDGTTMNVGAVGDLRRIKNAIGVARKVLEHTTHTLLAGESATKFAESMGFINEDLSTNASCALHSDWLAWNCQPNYWRNVIPDASKYCGPYKPPSILKRDGSTYKETGDSYGHDTIGMVVIHKMGNIAAGTSTNGIKFKIPGYQAVEYMRRGEDPTTACRKVISRIQKYFPNFFGAVVCANVTGSYGAACNKLSTFTQFHFMVYNPLKSEPTEEKVDCI
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: join(4679585..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687893..4688026,4689436..4689536)
location: region:4679585-4689536:1
so has part: feature:4679585-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687893-4688026:1:exon
so has part: feature:4689436-4689536:1:exon

XP_019777041.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4679585-4679714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4687893-4688026:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4689436-4689536:1:exon

AGA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase isoform X2
translation: MARKPNHRLLLLSLLLLCQAPVCSSGPLPLILNTWPFRNAAVAAWRTLASGGSALDAVESGCAACEQEQCDGTVGFGGSPDESGETTLDAMIMDGTTMNVGAVGDLRRIKNAIGVARKVLEHTTHTLLAGESATKFAESMGFINEDLSTNASCALHSDWLAWNCQPNYWRNVIPDASKYCGPYKPPSILKRDGSTYKETGDSYGHDTIGMVVIHKMGNIAAGTSTNGIKFKIPGRIGDSPIPGSGAYADDTAGAAAATGDGDILMRFLPSYQAVEYMRRGEDPTTACRKVISRIQKYFPNFFGAVVCANVTGSYGYENIKITVAMTAYV
SIO_010081: AGA
subclass of: SO_0000673
so part of: AGA
location: join(4679585..4679714,4681583..4681736,4683040..4683152,4684068..4684180,4685414..4685528,4686163..4686238,4687081..4687188,4687893..4688026,4689149..4689195)
location: region:4679585-4689195:1
so has part: feature:4679585-4679714:1:exon
so has part: feature:4681583-4681736:1:exon
so has part: feature:4683040-4683152:1:exon
so has part: feature:4684068-4684180:1:exon
so has part: feature:4685414-4685528:1:exon
so has part: feature:4686163-4686238:1:exon
so has part: feature:4687081-4687188:1:exon
so has part: feature:4687893-4688026:1:exon
so has part: feature:4689149-4689195:1:exon

XP_019777040.1
type: Protein
SIO_000068: ncbiprotein

position:4689195:1
position: 4689195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4679585-4679714:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4681583-4681736:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683040-4683152:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4684068-4684180:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4685414-4685528:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4686163-4686238:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4687081-4687188:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4687893-4688026:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4689149-4689195:1:exon

LOC117310034
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310034
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4716952..4737060)
location: region:4716952-4737060:-1
so has part: feature:4716952-4737060:-1:exon
subclass of: SO_0000011

117310034
type: Gene
SIO_000068: ncbigene

position:4716952:-1
position: 4716952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4737060:-1
position: 4737060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4716952-4737060:-1:exon

LOC117310034
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117310034
product: uncharacterized LOC117310034, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004524301.1
SIO_010081: LOC117310034
subclass of: SO_0000673
so part of: LOC117310034
location: complement(join(4716952..4718255,4720227..4720546,4722520..4722663,4731910..4732108,4735160..4735285,4735370..4735549,4735709..4737060))
location: region:4716952-4737060:-1
so has part: feature:4735709-4737060:-1:exon
so has part: feature:4735370-4735549:-1:exon
so has part: feature:4735160-4735285:-1:exon
so has part: feature:4731910-4732108:-1:exon
so has part: feature:4722520-4722663:-1:exon
so has part: feature:4720227-4720546:-1:exon
so has part: feature:4716952-4718255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4735709-4737060:-1:exon

position:4735709:-1
position: 4735709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4735370-4735549:-1:exon

position:4735370:-1
position: 4735370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4735549:-1
position: 4735549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4735160-4735285:-1:exon

position:4735160:-1
position: 4735160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4735285:-1
position: 4735285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4731910-4732108:-1:exon

position:4731910:-1
position: 4731910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4732108:-1
position: 4732108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4722520-4722663:-1:exon

position:4722520:-1
position: 4722520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4722663:-1
position: 4722663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4720227-4720546:-1:exon

position:4720227:-1
position: 4720227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4720546:-1
position: 4720546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4716952-4718255:-1:exon

position:4718255:-1
position: 4718255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117310034
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117310034
product: uncharacterized LOC117310034, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_004524302.1
SIO_010081: LOC117310034
subclass of: SO_0000673
so part of: LOC117310034
location: complement(join(4716952..4718255,4720227..4720546,4722520..4722663,4731910..4732108,4735370..4737060))
location: region:4716952-4737060:-1
so has part: feature:4735370-4737060:-1:exon
so has part: feature:4731910-4732108:-1:exon
so has part: feature:4722520-4722663:-1:exon
so has part: feature:4720227-4720546:-1:exon
so has part: feature:4716952-4718255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4735370-4737060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4731910-4732108:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4722520-4722663:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4720227-4720546:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4716952-4718255:-1:exon

LOC117310034
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117310034
product: uncharacterized LOC117310034, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004524300.1
SIO_010081: LOC117310034
subclass of: SO_0000673
so part of: LOC117310034
location: complement(join(4716952..4718255,4720227..4720546,4722520..4722663,4731910..4732108,4735160..4735285,4735370..4737060))
location: region:4716952-4737060:-1
so has part: feature:4735370-4737060:-1:exon
so has part: feature:4735160-4735285:-1:exon
so has part: feature:4731910-4732108:-1:exon
so has part: feature:4722520-4722663:-1:exon
so has part: feature:4720227-4720546:-1:exon
so has part: feature:4716952-4718255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4735370-4737060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4735160-4735285:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4731910-4732108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4722520-4722663:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4720227-4720546:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4716952-4718255:-1:exon

NEIL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4737356..4788929)
location: region:4737356-4788929:-1
so has part: feature:4737356-4788929:-1:exon
subclass of: SO_0000010

101331040
type: Gene
SIO_000068: ncbigene

position:4737356:-1
position: 4737356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4788929:-1
position: 4788929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4737356-4788929:-1:exon

NEIL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: NEIL3
product: nei like DNA glycosylase 3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033848834.1
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4737356..4738761,4738892..4738939,4741831..4741954,4755512..4755929,4757367..4757536,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788929))
location: region:4737356-4788929:-1
so has part: feature:4788720-4788929:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757536:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4741831-4741954:-1:exon
so has part: feature:4738892-4738939:-1:exon
so has part: feature:4737356-4738761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788929:-1:exon

position:4788720:-1
position: 4788720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

position:4779682:-1
position: 4779682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4779809:-1
position: 4779809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

position:4772253:-1
position: 4772253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4772387:-1
position: 4772387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

position:4771732:-1
position: 4771732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4771945:-1
position: 4771945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

position:4768921:-1
position: 4768921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4768995:-1
position: 4768995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

position:4767189:-1
position: 4767189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4767355:-1
position: 4767355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757536:-1:exon

position:4757367:-1
position: 4757367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4757536:-1
position: 4757536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

position:4755512:-1
position: 4755512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4755929:-1
position: 4755929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4741831-4741954:-1:exon

position:4741831:-1
position: 4741831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4741954:-1
position: 4741954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4738892-4738939:-1:exon

position:4738892:-1
position: 4738892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4738939:-1
position: 4738939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4737356-4738761:-1:exon

position:4738761:-1
position: 4738761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEIL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X3
translation: MVEGPGCTLNGEKIRARVRPGQAVTDMRGRALQSPGGPGSPPSASGAAGSSQAAALNNNKDSSQNFLRLFNGHIYSGVETLGKELFMYFGPKALRIHFGMKGFLVINPVKSKNKNGLPPVFEVQLTKDLICFFDSSVEIRNSAESQQRIRMMEELDVCSPNFSFPRAESEVKKQRGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHHLVKMIRDFSLLFYRCHKAGSAVSNHYKVYKRPNCGQCCCKITVCRLGENKRMTYFCPQCQKENAQHVDICRLPARNTTVSWPSSRGGHLMDSVARKSEEQWTCEVCTLINKPSSEACDACLTSRPTDSVPKNEENPIAFNSLVKYPCNSFGKPRTEVKINRKTAFGTTTLVLTDFSNKSSALGREESQNQILDGEFPNPPTNVCFSDTVHSSKERTNYRTQLSNKVNISSMVCSPSKLFSPAYKRLKTTHCSSRDLKSGNPGFSNREPMAEKQASAHHRDLCWVNDATRGPSEQMKKGIILPMLCKMAY
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4738931..4738939,4741831..4741954,4755512..4755929,4757367..4757536,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788875))
location: region:4738931-4788875:-1
so has part: feature:4788720-4788875:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757536:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4741831-4741954:-1:exon
so has part: feature:4738931-4738939:-1:exon

XP_033704725.1
type: Protein
SIO_000068: ncbiprotein

position:4738931:-1
position: 4738931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4788875:-1
position: 4788875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4741831-4741954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4738931-4738939:-1:exon

NEIL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: NEIL3
product: nei like DNA glycosylase 3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033848833.1
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4747482..4747829,4749219..4749393,4755512..4755929,4757367..4757533,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788929))
location: region:4747482-4788929:-1
so has part: feature:4788720-4788929:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757533:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4749219-4749393:-1:exon
so has part: feature:4747482-4747829:-1:exon

position:4747482:-1
position: 4747482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757533:-1:exon

position:4757533:-1
position: 4757533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4749219-4749393:-1:exon

position:4749219:-1
position: 4749219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4749393:-1
position: 4749393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4747482-4747829:-1:exon

position:4747829:-1
position: 4747829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NEIL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: NEIL3
product: nei like DNA glycosylase 3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_019921619.2
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4747482..4747829,4749219..4749393,4755512..4755929,4757367..4757536,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788929))
location: region:4747482-4788929:-1
so has part: feature:4788720-4788929:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757536:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4749219-4749393:-1:exon
so has part: feature:4747482-4747829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4749219-4749393:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4747482-4747829:-1:exon

NEIL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X2
translation: MVEGPGCTLNGEKIRARVRPGQAVTDMRGRALQSPGGPGSPPSASGAAGSSQAAALNNNKDSSQNFLRLFNGHIYSGVETLGKELFMYFGPKALRIHFGMKGFLVINPVKSKNKNGLPPVFEVQLTKDLICFFDSSVEIRNSAESQQRIRMMEELDVCSPNFSFPRAESEVKKQRGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHHLVKMIRDFSLLFYRCHKAGSAVSNHYKVYKRPNCGQCCCKITVCRLGENKRMTYFCPQCQKENAQHVDIWLPARNTTVSWPSSRGGHLMDSVARKSEEQWTCEVCTLINKPSSEACDACLTSRPTDSVPKNEENPIAFNSLVKYPCNSFGKPRTEVKINRKTAFGTTTLVLTDFSNKSSALGREESQNQILDGEFPNPPTNVCFSDTVHSSKERTNYRTQLSNKVNISSMVCSPSKLFSPAYKRLKTTHCSSRDLKSGNPGFSNRERQSNTPGGPRSLNACSPRCSKHDRPCVLQVVRKDGENKGRHFYACPLPREAQCGFFEWADLSFPFCNHGKRSIMRTVLKIGPNNGKNFFVCPLGKEKQCSFFQWAENGPGINIIPGC
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4747647..4747829,4749219..4749393,4755512..4755929,4757367..4757533,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788875))
location: region:4747647-4788875:-1
so has part: feature:4788720-4788875:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757533:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4749219-4749393:-1:exon
so has part: feature:4747647-4747829:-1:exon

XP_033704724.1
type: Protein
SIO_000068: ncbiprotein

position:4747647:-1
position: 4747647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757533:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4749219-4749393:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4747647-4747829:-1:exon

NEIL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X1
translation: MVEGPGCTLNGEKIRARVRPGQAVTDMRGRALQSPGGPGSPPSASGAAGSSQAAALNNNKDSSQNFLRLFNGHIYSGVETLGKELFMYFGPKALRIHFGMKGFLVINPVKSKNKNGLPPVFEVQLTKDLICFFDSSVEIRNSAESQQRIRMMEELDVCSPNFSFPRAESEVKKQRGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHHLVKMIRDFSLLFYRCHKAGSAVSNHYKVYKRPNCGQCCCKITVCRLGENKRMTYFCPQCQKENAQHVDICRLPARNTTVSWPSSRGGHLMDSVARKSEEQWTCEVCTLINKPSSEACDACLTSRPTDSVPKNEENPIAFNSLVKYPCNSFGKPRTEVKINRKTAFGTTTLVLTDFSNKSSALGREESQNQILDGEFPNPPTNVCFSDTVHSSKERTNYRTQLSNKVNISSMVCSPSKLFSPAYKRLKTTHCSSRDLKSGNPGFSNRERQSNTPGGPRSLNACSPRCSKHDRPCVLQVVRKDGENKGRHFYACPLPREAQCGFFEWADLSFPFCNHGKRSIMRTVLKIGPNNGKNFFVCPLGKEKQCSFFQWAENGPGINIIPGC
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4747647..4747829,4749219..4749393,4755512..4755929,4757367..4757536,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788875))
location: region:4747647-4788875:-1
so has part: feature:4788720-4788875:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757536:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4749219-4749393:-1:exon
so has part: feature:4747647-4747829:-1:exon

XP_019777178.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4749219-4749393:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4747647-4747829:-1:exon

NEIL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: NEIL3
product: nei like DNA glycosylase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_019921620.2
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4747664..4747829,4755512..4755929,4757367..4757536,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788929))
location: region:4747664-4788929:-1
so has part: feature:4788720-4788929:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757536:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4747664-4747829:-1:exon

position:4747664:-1
position: 4747664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788929:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4747664-4747829:-1:exon

NEIL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: NEIL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: endonuclease 8-like 3 isoform X4
translation: MVEGPGCTLNGEKIRARVRPGQAVTDMRGRALQSPGGPGSPPSASGAAGSSQAAALNNNKDSSQNFLRLFNGHIYSGVETLGKELFMYFGPKALRIHFGMKGFLVINPVKSKNKNGLPPVFEVQLTKDLICFFDSSVEIRNSAESQQRIRMMEELDVCSPNFSFPRAESEVKKQRGRMLCDVLMDQKVLPGVGNIIKNEALFDSGLHPAVKVCQLTDEQTHHLVKMIRDFSLLFYRCHKAGSAVSNHYKVYKRPNCGQCCCKITVCRLGENKRMTYFCPQCQKENAQHVDICRLPARNTTVSWPSSRGGHLMDSVARKSEEQWTCEVCTLINKPSSEACDACLTSRPTDSVPKNEENPIAFNSLVKYPCNSFGKPRTEVKINRKTAFGTTTLVLTDFSNKSSALGREESQNQILDGEFPNPPTNVCFSDTVHSSKERTNYRTQLSNKVNISSMVCSPSKLFSPAYKRLKTTHCSSRDLKSGNPGFSNSGQICPSHSATMANAPS
SIO_010081: NEIL3
subclass of: SO_0000673
so part of: NEIL3
location: complement(join(4747778..4747829,4755512..4755929,4757367..4757536,4767189..4767355,4768921..4768995,4771732..4771945,4772253..4772387,4779682..4779809,4788720..4788875))
location: region:4747778-4788875:-1
so has part: feature:4788720-4788875:-1:exon
so has part: feature:4779682-4779809:-1:exon
so has part: feature:4772253-4772387:-1:exon
so has part: feature:4771732-4771945:-1:exon
so has part: feature:4768921-4768995:-1:exon
so has part: feature:4767189-4767355:-1:exon
so has part: feature:4757367-4757536:-1:exon
so has part: feature:4755512-4755929:-1:exon
so has part: feature:4747778-4747829:-1:exon

XP_019777179.1
type: Protein
SIO_000068: ncbiprotein

position:4747778:-1
position: 4747778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4788720-4788875:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779682-4779809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4772253-4772387:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4771732-4771945:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4768921-4768995:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4767189-4767355:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4757367-4757536:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4755512-4755929:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4747778-4747829:-1:exon

VEGFC
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: VEGFC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5195780..5276050
location: region:5195780-5276050:1
so has part: feature:5195780-5276050:1:exon
subclass of: SO_0000010

101329736
type: Gene
SIO_000068: ncbigene

position:5195780:1
position: 5195780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5276050:1
position: 5276050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5195780-5276050:1:exon

VEGFC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: VEGFC
product: vascular endothelial growth factor C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_019921627.2
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: join(5195780..5196259,5244597..5244810,5246244..5246434,5256173..5256324,5271618..5271724,5272028..5272361,5275582..5276050)
location: region:5195780-5276050:1
so has part: feature:5195780-5196259:1:exon
so has part: feature:5244597-5244810:1:exon
so has part: feature:5246244-5246434:1:exon
so has part: feature:5256173-5256324:1:exon
so has part: feature:5271618-5271724:1:exon
so has part: feature:5272028-5272361:1:exon
so has part: feature:5275582-5276050:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5195780-5196259:1:exon

position:5196259:1
position: 5196259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5244597-5244810:1:exon

position:5244597:1
position: 5244597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5244810:1
position: 5244810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5246244-5246434:1:exon

position:5246244:1
position: 5246244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5246434:1
position: 5246434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5256173-5256324:1:exon

position:5256173:1
position: 5256173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5256324:1
position: 5256324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5271618-5271724:1:exon

position:5271618:1
position: 5271618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5271724:1
position: 5271724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5272028-5272361:1:exon

position:5272028:1
position: 5272028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5272361:1
position: 5272361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5275582-5276050:1:exon

position:5275582:1
position: 5275582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VEGFC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: VEGFC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor C isoform X1
translation: MHLLGFFSLACSLFAAALLQGPRRAPAAAAAAAFESGLGFSDAEPDAGEAKAYAGRELEEQLRSASSVDELMTLLYPESWKMYKCQLRKGGWQHSKEQANANARTEGTLKFAAAHYNAEILKSIDTEWRKTQCVPREVCVDVGKEFGAATNTFFKPPCVSVYRCGGCCNSEGQRCTNTSASYLSKALFEITVPLSQGPKPVTISFANHTSCRCMSKLDVYRQVHSIIRRSLPATLPQCQAANKTCPTDYIWNNHICRCLAQQDFIFSSNAGDDSADGFHDICGPNKELDEETCQCVCRGGLWPSSCGPHKELDRNSCQCVCKNKLFPNSCAANREFDENTCQCVCKRTCPRNQPLNPGKCACECTETPQKCFLKGKKFQHQTCSCYRRPCTNRVKHCEQGLSFSEEVCRCVPSYWKRPHMN
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: join(5196107..5196259,5244597..5244810,5246244..5246434,5256173..5256324,5271618..5271724,5272028..5272361,5275582..5275696)
location: region:5196107-5275696:1
so has part: feature:5196107-5196259:1:exon
so has part: feature:5244597-5244810:1:exon
so has part: feature:5246244-5246434:1:exon
so has part: feature:5256173-5256324:1:exon
so has part: feature:5271618-5271724:1:exon
so has part: feature:5272028-5272361:1:exon
so has part: feature:5275582-5275696:1:exon

XP_019777186.2
type: Protein
SIO_000068: ncbiprotein

position:5196107:1
position: 5196107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5275696:1
position: 5275696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5196107-5196259:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5244597-5244810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5246244-5246434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5256173-5256324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5271618-5271724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5272028-5272361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5275582-5275696:1:exon

VEGFC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: VEGFC
product: vascular endothelial growth factor C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019921628.2
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: join(5196743..5196845,5244597..5244810,5246244..5246434,5256173..5256324,5271618..5271724,5272028..5272361,5275582..5276047)
location: region:5196743-5276047:1
so has part: feature:5196743-5196845:1:exon
so has part: feature:5244597-5244810:1:exon
so has part: feature:5246244-5246434:1:exon
so has part: feature:5256173-5256324:1:exon
so has part: feature:5271618-5271724:1:exon
so has part: feature:5272028-5272361:1:exon
so has part: feature:5275582-5276047:1:exon

position:5196743:1
position: 5196743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5276047:1
position: 5276047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5196743-5196845:1:exon

position:5196845:1
position: 5196845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5244597-5244810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5246244-5246434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5256173-5256324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5271618-5271724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5272028-5272361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5275582-5276047:1:exon

VEGFC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: VEGFC
product: vascular endothelial growth factor C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033848816.1
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: join(5211941..5212000,5244597..5244810,5246244..5246434,5256173..5256324,5271618..5271724,5272028..5272361,5275582..5276047)
location: region:5211941-5276047:1
so has part: feature:5211941-5212000:1:exon
so has part: feature:5244597-5244810:1:exon
so has part: feature:5246244-5246434:1:exon
so has part: feature:5256173-5256324:1:exon
so has part: feature:5271618-5271724:1:exon
so has part: feature:5272028-5272361:1:exon
so has part: feature:5275582-5276047:1:exon

position:5211941:1
position: 5211941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5211941-5212000:1:exon

position:5212000:1
position: 5212000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5244597-5244810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5246244-5246434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5256173-5256324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5271618-5271724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5272028-5272361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5275582-5276047:1:exon

VEGFC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: VEGFC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor C isoform X2
translation: MHFIRKNLFYQTVRHAYAGRELEEQLRSASSVDELMTLLYPESWKMYKCQLRKGGWQHSKEQANANARTEGTLKFAAAHYNAEILKSIDTEWRKTQCVPREVCVDVGKEFGAATNTFFKPPCVSVYRCGGCCNSEGQRCTNTSASYLSKALFEITVPLSQGPKPVTISFANHTSCRCMSKLDVYRQVHSIIRRSLPATLPQCQAANKTCPTDYIWNNHICRCLAQQDFIFSSNAGDDSADGFHDICGPNKELDEETCQCVCRGGLWPSSCGPHKELDRNSCQCVCKNKLFPNSCAANREFDENTCQCVCKRTCPRNQPLNPGKCACECTETPQKCFLKGKKFQHQTCSCYRRPCTNRVKHCEQGLSFSEEVCRCVPSYWKRPHMN
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: join(5211956..5212000,5244597..5244810,5246244..5246434,5256173..5256324,5271618..5271724,5272028..5272361,5275582..5275696)
location: region:5211956-5275696:1
so has part: feature:5211956-5212000:1:exon
so has part: feature:5244597-5244810:1:exon
so has part: feature:5246244-5246434:1:exon
so has part: feature:5256173-5256324:1:exon
so has part: feature:5271618-5271724:1:exon
so has part: feature:5272028-5272361:1:exon
so has part: feature:5275582-5275696:1:exon

XP_033704707.1
type: Protein
SIO_000068: ncbiprotein

position:5211956:1
position: 5211956
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5211956-5212000:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5244597-5244810:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5246244-5246434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5256173-5256324:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5271618-5271724:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5272028-5272361:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5275582-5275696:1:exon

VEGFC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: VEGFC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vascular endothelial growth factor C isoform X3
translation: MTLLYPESWKMYKCQLRKGGWQHSKEQANANARTEGTLKFAAAHYNAEILKSIDTEWRKTQCVPREVCVDVGKEFGAATNTFFKPPCVSVYRCGGCCNSEGQRCTNTSASYLSKALFEITVPLSQGPKPVTISFANHTSCRCMSKLDVYRQVHSIIRRSLPATLPQCQAANKTCPTDYIWNNHICRCLAQQDFIFSSNAGDDSADGFHDICGPNKELDEETCQCVCRGGLWPSSCGPHKELDRNSCQCVCKNKLFPNSCAANREFDENTCQCVCKRTCPRNQPLNPGKCACECTETPQKCFLKGKKFQHQTCSCYRRPCTNRVKHCEQGLSFSEEVCRCVPSYWKRPHMN
SIO_010081: VEGFC
subclass of: SO_0000673
so part of: VEGFC
location: join(5244657..5244810,5246244..5246434,5256173..5256324,5271618..5271724,5272028..5272361,5275582..5275696)
location: region:5244657-5275696:1
so has part: feature:5244657-5244810:1:exon
so has part: feature:5246244-5246434:1:exon
so has part: feature:5256173-5256324:1:exon
so has part: feature:5271618-5271724:1:exon
so has part: feature:5272028-5272361:1:exon
so has part: feature:5275582-5275696:1:exon

XP_019777187.1
type: Protein
SIO_000068: ncbiprotein

position:5244657:1
position: 5244657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5244657-5244810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5246244-5246434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5256173-5256324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5271618-5271724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5272028-5272361:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5275582-5275696:1:exon

SPCS3
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: SPCS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5527679..5536469)
location: region:5527679-5536469:-1
so has part: feature:5527679-5536469:-1:exon
subclass of: SO_0000010

101322426
type: Gene
SIO_000068: ncbigene

position:5527679:-1
position: 5527679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5536469:-1
position: 5536469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5527679-5536469:-1:exon

SPCS3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: SPCS3
product: signal peptidase complex subunit 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 197 samples with support for all annotated introns
transcript id: XM_019921490.2
SIO_010081: SPCS3
subclass of: SO_0000673
so part of: SPCS3
location: complement(join(5527679..5528499,5529449..5529564,5532682..5532758,5534720..5534793,5536214..5536469))
location: region:5527679-5536469:-1
so has part: feature:5536214-5536469:-1:exon
so has part: feature:5534720-5534793:-1:exon
so has part: feature:5532682-5532758:-1:exon
so has part: feature:5529449-5529564:-1:exon
so has part: feature:5527679-5528499:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5536214-5536469:-1:exon

position:5536214:-1
position: 5536214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5534720-5534793:-1:exon

position:5534720:-1
position: 5534720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5534793:-1
position: 5534793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5532682-5532758:-1:exon

position:5532682:-1
position: 5532682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5532758:-1
position: 5532758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5529449-5529564:-1:exon

position:5529449:-1
position: 5529449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5529564:-1
position: 5529564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5527679-5528499:-1:exon

position:5528499:-1
position: 5528499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SPCS3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: SPCS3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: signal peptidase complex subunit 3
translation: MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRERSDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLLKDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAGILPLVTGSGHVSVPFPDTYEITKSY
SIO_010081: SPCS3
subclass of: SO_0000673
so part of: SPCS3
location: complement(join(5528367..5528499,5529449..5529564,5532682..5532758,5534720..5534793,5536214..5536356))
location: region:5528367-5536356:-1
so has part: feature:5536214-5536356:-1:exon
so has part: feature:5534720-5534793:-1:exon
so has part: feature:5532682-5532758:-1:exon
so has part: feature:5529449-5529564:-1:exon
so has part: feature:5528367-5528499:-1:exon

XP_019777049.1
type: Protein
SIO_000068: ncbiprotein

position:5528367:-1
position: 5528367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5536356:-1
position: 5536356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5536214-5536356:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5534720-5534793:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5532682-5532758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5529449-5529564:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5528367-5528499:-1:exon

ASB5
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: ASB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5569010..5620635
location: region:5569010-5620635:1
so has part: feature:5569010-5620635:1:exon
subclass of: SO_0000010

101322131
type: Gene
SIO_000068: ncbigene

position:5569010:1
position: 5569010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5620635:1
position: 5620635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569010-5620635:1:exon

ASB5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ASB5
product: ankyrin repeat and SOCS box containing 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_004312492.3
SIO_010081: ASB5
subclass of: SO_0000673
so part of: ASB5
location: join(5569010..5569421,5611139..5611218,5613863..5613970,5614901..5615051,5615220..5615354,5617347..5617538,5618552..5620635)
location: region:5569010-5620635:1
so has part: feature:5569010-5569421:1:exon
so has part: feature:5611139-5611218:1:exon
so has part: feature:5613863-5613970:1:exon
so has part: feature:5614901-5615051:1:exon
so has part: feature:5615220-5615354:1:exon
so has part: feature:5617347-5617538:1:exon
so has part: feature:5618552-5620635:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5569010-5569421:1:exon

position:5569421:1
position: 5569421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5611139-5611218:1:exon

position:5611139:1
position: 5611139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5611218:1
position: 5611218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5613863-5613970:1:exon

position:5613863:1
position: 5613863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5613970:1
position: 5613970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5614901-5615051:1:exon

position:5614901:1
position: 5614901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5615051:1
position: 5615051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5615220-5615354:1:exon

position:5615220:1
position: 5615220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5615354:1
position: 5615354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5617347-5617538:1:exon

position:5617347:1
position: 5617347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5617538:1
position: 5617538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5618552-5620635:1:exon

position:5618552:1
position: 5618552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASB5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ASB5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat and SOCS box protein 5
translation: MDGINILSWRHRYQLLFSFLRTSCPGASRTGARHIRDLDLTKGGSSRAGAAMSVVEESRPFAQQLSNVYFTILSLFCFKLFVKISLAILSHFYIVKGNRKEAARIAAEFYGVTQGQGSWADRSPLHEAASQGRLLALRTLLSQGYNVNAVTIDHVTPLHEACLGDHVACARTLLQAGANVNAITIDGVTPLFNACSQGSPSCTELLLEYGAKPQQESCLPSPTHEAASKGHHECLEILISWGIDVDQDIPHLGTPLYVASMSQQFHCIRKLLYAGADVQKGKYWDTPLHAAAQQSCIEIINLLLEFGADVNARNTELLRPVDVATSSSLVERLLLQHEATPSSLCQLCRLCIRNYIGRPRLHLIPQLQLPTLLQNFLQYR
SIO_010081: ASB5
subclass of: SO_0000673
so part of: ASB5
location: join(5569073..5569421,5611139..5611218,5613863..5613970,5614901..5615051,5615220..5615354,5617347..5617538,5618552..5618679)
location: region:5569073-5618679:1
so has part: feature:5569073-5569421:1:exon
so has part: feature:5611139-5611218:1:exon
so has part: feature:5613863-5613970:1:exon
so has part: feature:5614901-5615051:1:exon
so has part: feature:5615220-5615354:1:exon
so has part: feature:5617347-5617538:1:exon
so has part: feature:5618552-5618679:1:exon

XP_004312540.2
type: Protein
SIO_000068: ncbiprotein

position:5569073:1
position: 5569073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5618679:1
position: 5618679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5569073-5569421:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5611139-5611218:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5613863-5613970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5614901-5615051:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5615220-5615354:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5617347-5617538:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5618552-5618679:1:exon

SPATA4
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: SPATA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5627426..5632930
location: region:5627426-5632930:1
so has part: feature:5627426-5632930:1:exon
subclass of: SO_0000010

101323004
type: Gene
SIO_000068: ncbigene

position:5627426:1
position: 5627426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5632930:1
position: 5632930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5627426-5632930:1:exon

SPATA4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: SPATA4
product: spermatogenesis associated 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019921233.2
SIO_010081: SPATA4
subclass of: SO_0000673
so part of: SPATA4
location: join(5627426..5627731,5628483..5628612,5628994..5629112,5629213..5629433,5631393..5631506,5632706..5632930)
location: region:5627426-5632930:1
so has part: feature:5627426-5627731:1:exon
so has part: feature:5628483-5628612:1:exon
so has part: feature:5628994-5629112:1:exon
so has part: feature:5629213-5629433:1:exon
so has part: feature:5631393-5631506:1:exon
so has part: feature:5632706-5632930:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5627426-5627731:1:exon

position:5627731:1
position: 5627731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5628483-5628612:1:exon

position:5628483:1
position: 5628483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5628612:1
position: 5628612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5628994-5629112:1:exon

position:5628994:1
position: 5628994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5629112:1
position: 5629112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5629213-5629433:1:exon

position:5629213:1
position: 5629213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5629433:1
position: 5629433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5631393-5631506:1:exon

position:5631393:1
position: 5631393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5631506:1
position: 5631506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5632706-5632930:1:exon

position:5632706:1
position: 5632706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPATA4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: SPATA4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: spermatogenesis-associated protein 4
translation: MAAAGLGGELLTLPTVPKSPSLAPRPAAPMRGRPKKCLVYPHPPKRSRVSPSVLRWLQGLDLSFFPRNINRDFSNGFLIAEIFTVHYPWDLKLSSFKNGTSLKVKLDNWAQLEKFLARKKLRLPKELIHGTIHCKAGVPEILIQEVYTLLTHREIKSIQDDLVNFTDYSYQMQLPLVSRSTASKSIKDNIRLSELIGNPNKLNNERKVEFLLLLQMLQRKLSRKLNPKWFEVKPTLGESTFSHGPAQACGCKCNSVVSKERVAPVCNGGNPLKEIHMKRAGKHSSDSMKPIRSEAWKGDPEERLSDGL
SIO_010081: SPATA4
subclass of: SO_0000673
so part of: SPATA4
location: join(5627520..5627731,5628483..5628612,5628994..5629112,5629213..5629433,5631393..5631506,5632706..5632836)
location: region:5627520-5632836:1
so has part: feature:5627520-5627731:1:exon
so has part: feature:5628483-5628612:1:exon
so has part: feature:5628994-5629112:1:exon
so has part: feature:5629213-5629433:1:exon
so has part: feature:5631393-5631506:1:exon
so has part: feature:5632706-5632836:1:exon

XP_019776792.1
type: Protein
SIO_000068: ncbiprotein

position:5627520:1
position: 5627520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5632836:1
position: 5632836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5627520-5627731:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5628483-5628612:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5628994-5629112:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5629213-5629433:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5631393-5631506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5632706-5632836:1:exon

WDR17
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5636504..5715679)
location: region:5636504-5715679:-1
so has part: feature:5636504-5715679:-1:exon
subclass of: SO_0000010

101323299
type: Gene
SIO_000068: ncbigene

position:5636504:-1
position: 5636504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5715679:-1
position: 5715679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5636504-5715679:-1:exon

WDR17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: WDR17
product: WD repeat domain 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019921576.2
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: complement(join(5636504..5636791,5638938..5639121,5639444..5639542,5642183..5642284,5643564..5643666,5643943..5644084,5646638..5646749,5650617..5650756,5651591..5651690,5652992..5653083,5653543..5653675,5656326..5656390,5659106..5659261,5660285..5660410,5661376..5661506,5661594..5661743,5662814..5663016,5664506..5664670,5668307..5668393,5670073..5670155,5672590..5672681,5675709..5675877,5676478..5676662,5679286..5679408,5681287..5681538,5684737..5684967,5685596..5685643,5689003..5689186,5691988..5692116,5703147..5703268,5705343..5705424,5715550..5715679))
location: region:5636504-5715679:-1
so has part: feature:5715550-5715679:-1:exon
so has part: feature:5705343-5705424:-1:exon
so has part: feature:5703147-5703268:-1:exon
so has part: feature:5691988-5692116:-1:exon
so has part: feature:5689003-5689186:-1:exon
so has part: feature:5685596-5685643:-1:exon
so has part: feature:5684737-5684967:-1:exon
so has part: feature:5681287-5681538:-1:exon
so has part: feature:5679286-5679408:-1:exon
so has part: feature:5676478-5676662:-1:exon
so has part: feature:5675709-5675877:-1:exon
so has part: feature:5672590-5672681:-1:exon
so has part: feature:5670073-5670155:-1:exon
so has part: feature:5668307-5668393:-1:exon
so has part: feature:5664506-5664670:-1:exon
so has part: feature:5662814-5663016:-1:exon
so has part: feature:5661594-5661743:-1:exon
so has part: feature:5661376-5661506:-1:exon
so has part: feature:5660285-5660410:-1:exon
so has part: feature:5659106-5659261:-1:exon
so has part: feature:5656326-5656390:-1:exon
so has part: feature:5653543-5653675:-1:exon
so has part: feature:5652992-5653083:-1:exon
so has part: feature:5651591-5651690:-1:exon
so has part: feature:5650617-5650756:-1:exon
so has part: feature:5646638-5646749:-1:exon
so has part: feature:5643943-5644084:-1:exon
so has part: feature:5643564-5643666:-1:exon
so has part: feature:5642183-5642284:-1:exon
so has part: feature:5639444-5639542:-1:exon
so has part: feature:5638938-5639121:-1:exon
so has part: feature:5636504-5636791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5715550-5715679:-1:exon

position:5715550:-1
position: 5715550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5705343-5705424:-1:exon

position:5705343:-1
position: 5705343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5705424:-1
position: 5705424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5703147-5703268:-1:exon

position:5703147:-1
position: 5703147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5703268:-1
position: 5703268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5691988-5692116:-1:exon

position:5691988:-1
position: 5691988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5692116:-1
position: 5692116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5689003-5689186:-1:exon

position:5689003:-1
position: 5689003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5689186:-1
position: 5689186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5685596-5685643:-1:exon

position:5685596:-1
position: 5685596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5685643:-1
position: 5685643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5684737-5684967:-1:exon

position:5684737:-1
position: 5684737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5684967:-1
position: 5684967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5681287-5681538:-1:exon

position:5681287:-1
position: 5681287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5681538:-1
position: 5681538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5679286-5679408:-1:exon

position:5679286:-1
position: 5679286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5679408:-1
position: 5679408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5676478-5676662:-1:exon

position:5676478:-1
position: 5676478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5676662:-1
position: 5676662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5675709-5675877:-1:exon

position:5675709:-1
position: 5675709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5675877:-1
position: 5675877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5672590-5672681:-1:exon

position:5672590:-1
position: 5672590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5672681:-1
position: 5672681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5670073-5670155:-1:exon

position:5670073:-1
position: 5670073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5670155:-1
position: 5670155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5668307-5668393:-1:exon

position:5668307:-1
position: 5668307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5668393:-1
position: 5668393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5664506-5664670:-1:exon

position:5664506:-1
position: 5664506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5664670:-1
position: 5664670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5662814-5663016:-1:exon

position:5662814:-1
position: 5662814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5663016:-1
position: 5663016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5661594-5661743:-1:exon

position:5661594:-1
position: 5661594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5661743:-1
position: 5661743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:5661376-5661506:-1:exon

position:5661376:-1
position: 5661376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5661506:-1
position: 5661506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:5660285-5660410:-1:exon

position:5660285:-1
position: 5660285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5660410:-1
position: 5660410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:5659106-5659261:-1:exon

position:5659106:-1
position: 5659106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5659261:-1
position: 5659261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:5656326-5656390:-1:exon

position:5656326:-1
position: 5656326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5656390:-1
position: 5656390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:5653543-5653675:-1:exon

position:5653543:-1
position: 5653543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5653675:-1
position: 5653675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:5652992-5653083:-1:exon

position:5652992:-1
position: 5652992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5653083:-1
position: 5653083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:5651591-5651690:-1:exon

position:5651591:-1
position: 5651591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5651690:-1
position: 5651690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:5650617-5650756:-1:exon

position:5650617:-1
position: 5650617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5650756:-1
position: 5650756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:5646638-5646749:-1:exon

position:5646638:-1
position: 5646638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5646749:-1
position: 5646749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5643943-5644084:-1:exon

position:5643943:-1
position: 5643943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5644084:-1
position: 5644084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:5643564-5643666:-1:exon

position:5643564:-1
position: 5643564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5643666:-1
position: 5643666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:5642183-5642284:-1:exon

position:5642183:-1
position: 5642183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5642284:-1
position: 5642284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:5639444-5639542:-1:exon

position:5639444:-1
position: 5639444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5639542:-1
position: 5639542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:5638938-5639121:-1:exon

position:5638938:-1
position: 5638938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5639121:-1
position: 5639121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:5636504-5636791:-1:exon

position:5636791:-1
position: 5636791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WDR17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: WDR17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 17
translation: MAWMTYISHWFEQDDCYEGLQRANMSQVRQVGLLAAGCQPWNKDVCVANGDRFAYCATLAIYVYQLDHRYNEFKLHAIMSEHKKTITAISWCPHNPDLFASGSTDNLVIIWNVAEQKVIAKLDNTKEAGAVVESSPADAGDTGTPASLSWCWNADDAVAFASQRGPLFIWTISGPDSGVTVHREAHSFLSDICIFRWHTQKKGKVVFGHIDGSLSIFQPGSKSQKHVLRPESLEGTDEEDPVTALEWDPLSTDYLLVANLHRGIRLVDSESLCCITTFNFPSAVASVQCLAWVPGAPGMFITGDSQVGVLRVWNVSRATPVDNFKLKKTGFHCLHVLNSPPRKKFSVQSPTKNHYTSSTSEAVPPPTLTQNQAFSVPPGHAVCCFLDGGVGLYDMGAKKWDFLRDLGHVETIFDCKFKPDDPNLLATASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNGAFIWDIKKGKIVQRFNEHGKNGIFCIAWSHKDSKRIATCSGDGYCIIRTVDGKVLHKYKHPAAVFGCDWSQNNRDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTEKVFHVRWSPLREGILCSGSDDGSVRIWDYTKDACVNVLRGHTAPVRGLMWNTEIPYLLISGSWDYTIKVWDTREGACLDTVYDHGADVYGLTCHPRRPFTMASCSRDSTVRLWSLTPLITPLQINILADRSWEEIIGNTDCAVEQGMPPLLCGKVSRDIKQEIEKLSGNPRVKKLRWFSECLSPPGGSDNLWDLVAVIKGQDDSLLPQNYCKGIMHLKHLITFRTSEAQELTTVKMSKFGGGIGVPTKEERLKEAAEIHLRLGQIRRYCELMVELGEWDKALSVAPGVSVKYWKKLMQRRADQLIQEDKDDVIPYCIATGDVKKLVHFFMSRGQLKEALLVAQAACEGNMQTFHVSTPKGSSYSDDIYKEDFNELLQEACRELAEWYFQDGRAVLAACCHLAVDNIELAMAYLIRGNELELAVSVGTVLGELAGPATHYALELLARKCMMIPMWNLAVDLLLMTPDSELQLVKLCAFYPGCIEEINDLHEKCKLPTVEECMQLAETAHADGNIFESIKYYLLSQEPEKALPIGIDFIKGSISSSNWTLDTIYPVLDLLSYVRTEKLLLHTCTEARNELLILCGYVGALLAIRRQYQSIVPALYEYTSQLLKRRKVSVPIKIEHLSEELDAWRACSRSINRSSEEAPHTPPSDSQRMVYATLLKRLKEEPLRGIIGPDYVTGSNLPSHSDIHISCFTGLKIQGPVFFLEDGKSTISLNDALMWAKVNPFSPLGTGIRLNPF
SIO_010081: WDR17
subclass of: SO_0000673
so part of: WDR17
location: complement(join(5636672..5636791,5638938..5639121,5639444..5639542,5642183..5642284,5643564..5643666,5643943..5644084,5646638..5646749,5650617..5650756,5651591..5651690,5652992..5653083,5653543..5653675,5656326..5656390,5659106..5659261,5660285..5660410,5661376..5661506,5661594..5661743,5662814..5663016,5664506..5664670,5668307..5668393,5670073..5670155,5672590..5672681,5675709..5675877,5676478..5676662,5679286..5679408,5681287..5681538,5684737..5684967,5685596..5685643,5689003..5689186,5691988..5692116,5703147..5703212))
location: region:5636672-5703212:-1
so has part: feature:5703147-5703212:-1:exon
so has part: feature:5691988-5692116:-1:exon
so has part: feature:5689003-5689186:-1:exon
so has part: feature:5685596-5685643:-1:exon
so has part: feature:5684737-5684967:-1:exon
so has part: feature:5681287-5681538:-1:exon
so has part: feature:5679286-5679408:-1:exon
so has part: feature:5676478-5676662:-1:exon
so has part: feature:5675709-5675877:-1:exon
so has part: feature:5672590-5672681:-1:exon
so has part: feature:5670073-5670155:-1:exon
so has part: feature:5668307-5668393:-1:exon
so has part: feature:5664506-5664670:-1:exon
so has part: feature:5662814-5663016:-1:exon
so has part: feature:5661594-5661743:-1:exon
so has part: feature:5661376-5661506:-1:exon
so has part: feature:5660285-5660410:-1:exon
so has part: feature:5659106-5659261:-1:exon
so has part: feature:5656326-5656390:-1:exon
so has part: feature:5653543-5653675:-1:exon
so has part: feature:5652992-5653083:-1:exon
so has part: feature:5651591-5651690:-1:exon
so has part: feature:5650617-5650756:-1:exon
so has part: feature:5646638-5646749:-1:exon
so has part: feature:5643943-5644084:-1:exon
so has part: feature:5643564-5643666:-1:exon
so has part: feature:5642183-5642284:-1:exon
so has part: feature:5639444-5639542:-1:exon
so has part: feature:5638938-5639121:-1:exon
so has part: feature:5636672-5636791:-1:exon

XP_019777135.2
type: Protein
SIO_000068: ncbiprotein

position:5636672:-1
position: 5636672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5703212:-1
position: 5703212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5703147-5703212:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5691988-5692116:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5689003-5689186:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5685596-5685643:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5684737-5684967:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5681287-5681538:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5679286-5679408:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5676478-5676662:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5675709-5675877:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5672590-5672681:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5670073-5670155:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5668307-5668393:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5664506-5664670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5662814-5663016:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5661594-5661743:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5661376-5661506:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5660285-5660410:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5659106-5659261:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5656326-5656390:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5653543-5653675:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5652992-5653083:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5651591-5651690:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5650617-5650756:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5646638-5646749:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5643943-5644084:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5643564-5643666:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5642183-5642284:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5639444-5639542:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5638938-5639121:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5636672-5636791:-1:exon

LOC117310083
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310083
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5743495..5743618)
location: region:5743495-5743618:-1
so has part: feature:5743495-5743618:-1:exon

117310083
type: Gene
SIO_000068: ncbigene

position:5743495:-1
position: 5743495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5743618:-1
position: 5743618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5743495-5743618:-1:exon

LOC117310083
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC117310083
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00425
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117310083
subclass of: SO_0000673
so part of: LOC117310083
location: complement(5743495..5743618)
location: region:5743495-5743618:-1
so has part: feature:5743495-5743618:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5743495-5743618:-1:exon

GPM6A
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: GPM6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5751955..6000006
location: region:5751955-6000006:1
so has part: feature:5751955-6000006:1:exon
subclass of: SO_0000010

101329400
type: Gene
SIO_000068: ncbigene

position:5751955:1
position: 5751955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6000006:1
position: 6000006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5751955-6000006:1:exon

GPM6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: GPM6A
product: glycoprotein M6A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_033848840.1
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: join(5751955..5752107,5964080..5964272,5973612..5973756,5990115..5990268,5994267..5994343,5994878..5994943,5997882..6000006)
location: region:5751955-6000006:1
so has part: feature:5751955-5752107:1:exon
so has part: feature:5964080-5964272:1:exon
so has part: feature:5973612-5973756:1:exon
so has part: feature:5990115-5990268:1:exon
so has part: feature:5994267-5994343:1:exon
so has part: feature:5994878-5994943:1:exon
so has part: feature:5997882-6000006:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5751955-5752107:1:exon

position:5752107:1
position: 5752107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5964080-5964272:1:exon

position:5964080:1
position: 5964080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5964272:1
position: 5964272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5973612-5973756:1:exon

position:5973612:1
position: 5973612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5973756:1
position: 5973756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5990115-5990268:1:exon

position:5990115:1
position: 5990115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5990268:1
position: 5990268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5994267-5994343:1:exon

position:5994267:1
position: 5994267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5994343:1
position: 5994343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5994878-5994943:1:exon

position:5994878:1
position: 5994878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5994943:1
position: 5994943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5997882-6000006:1:exon

position:5997882:1
position: 5997882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GPM6A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: GPM6A
product: glycoprotein M6A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 18 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_019921618.2
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: join(5751961..5752107,5964080..5964272,5973612..5973768,5990115..5990268,5994267..5994343,5994878..5994943,5997882..6000006)
location: region:5751961-6000006:1
so has part: feature:5751961-5752107:1:exon
so has part: feature:5964080-5964272:1:exon
so has part: feature:5973612-5973768:1:exon
so has part: feature:5990115-5990268:1:exon
so has part: feature:5994267-5994343:1:exon
so has part: feature:5994878-5994943:1:exon
so has part: feature:5997882-6000006:1:exon

position:5751961:1
position: 5751961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5751961-5752107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5964080-5964272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5973612-5973768:1:exon

position:5973768:1
position: 5973768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5990115-5990268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5994267-5994343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5994878-5994943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5997882-6000006:1:exon

GPM6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: GPM6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal membrane glycoprotein M6-a isoform X1
translation: MGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: join(5752104..5752107,5964080..5964272,5973612..5973768,5990115..5990268,5994267..5994343,5994878..5994943,5997882..5998034)
location: region:5752104-5998034:1
so has part: feature:5752104-5752107:1:exon
so has part: feature:5964080-5964272:1:exon
so has part: feature:5973612-5973768:1:exon
so has part: feature:5990115-5990268:1:exon
so has part: feature:5994267-5994343:1:exon
so has part: feature:5994878-5994943:1:exon
so has part: feature:5997882-5998034:1:exon

XP_019777177.1
type: Protein
SIO_000068: ncbiprotein

position:5752104:1
position: 5752104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5998034:1
position: 5998034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5752104-5752107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5964080-5964272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5973612-5973768:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5990115-5990268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5994267-5994343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5994878-5994943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5997882-5998034:1:exon

GPM6A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: GPM6A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuronal membrane glycoprotein M6-a isoform X2
translation: MGCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTLDVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCFIMLTYLFMLAWLGVTAFTSLPVYMYFNLWTICRNTTLVEGANLCLDLRQFGIVTIGEEKKICTVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYVKDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT
SIO_010081: GPM6A
subclass of: SO_0000673
so part of: GPM6A
location: join(5752104..5752107,5964080..5964272,5973612..5973756,5990115..5990268,5994267..5994343,5994878..5994943,5997882..5998034)
location: region:5752104-5998034:1
so has part: feature:5752104-5752107:1:exon
so has part: feature:5964080-5964272:1:exon
so has part: feature:5973612-5973756:1:exon
so has part: feature:5990115-5990268:1:exon
so has part: feature:5994267-5994343:1:exon
so has part: feature:5994878-5994943:1:exon
so has part: feature:5997882-5998034:1:exon

XP_033704731.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5752104-5752107:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5964080-5964272:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5973612-5973756:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5990115-5990268:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5994267-5994343:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5994878-5994943:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5997882-5998034:1:exon

LOC101330066
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101330066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6040993..6046666)
location: region:6040993-6046666:-1
so has part: feature:6040993-6046666:-1:exon
subclass of: SO_0000010

101330066
type: Gene
SIO_000068: ncbigene

position:6040993:-1
position: 6040993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6046666:-1
position: 6046666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6040993-6046666:-1:exon

LOC101330066
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101330066
product: beta-defensin 130B-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_004327604.1
SIO_010081: LOC101330066
subclass of: SO_0000673
so part of: LOC101330066
location: complement(join(6040993..6041174,6046609..6046666))
location: region:6040993-6046666:-1
so has part: feature:6046609-6046666:-1:exon
so has part: feature:6040993-6041174:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6046609-6046666:-1:exon

position:6046609:-1
position: 6046609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6040993-6041174:-1:exon

position:6041174:-1
position: 6041174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101330066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101330066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 130B-like
translation: MRLHLLLSVLLLSLTIIPKASTGLIPGQKQCILLRGVCKDGGCTSTDDTIGICNDQKKCCRRWWVLLPYPTPVPKSKSP
SIO_010081: LOC101330066
subclass of: SO_0000673
so part of: LOC101330066
location: complement(join(6040993..6041174,6046609..6046666))
location: region:6040993-6046666:-1
so has part: feature:6046609-6046666:-1:exon
so has part: feature:6040993-6041174:-1:exon

XP_004327652.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6046609-6046666:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6040993-6041174:-1:exon

LOC117310055
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6054431..6069874)
location: region:6054431-6069874:-1
so has part: feature:6054431-6069874:-1:exon
subclass of: SO_0000010

117310055
type: Gene
SIO_000068: ncbigene

position:6054431:-1
position: 6054431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6069874:-1
position: 6069874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6054431-6069874:-1:exon

LOC117310055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC117310055
product: beta-defensin 109-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033848926.1
SIO_010081: LOC117310055
subclass of: SO_0000673
so part of: LOC117310055
location: complement(join(6054431..6054634,6065537..6065673,6069813..6069874))
location: region:6054431-6069874:-1
so has part: feature:6069813-6069874:-1:exon
so has part: feature:6065537-6065673:-1:exon
so has part: feature:6054431-6054634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6069813-6069874:-1:exon

position:6069813:-1
position: 6069813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6065537-6065673:-1:exon

position:6065537:-1
position: 6065537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6065673:-1
position: 6065673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6054431-6054634:-1:exon

position:6054634:-1
position: 6054634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117310055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC117310055
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: beta-defensin 109-like
translation: MYFHLVVVWSPSLYMAWMSSSLNVRIEFTYKNLLYFSTQNTAFQSNHSFHPHTFPVPLRPGTTTGTVRSGLASAENHCFNLSGLCRRDTCKIXQDIIGAYRRRWKCCRQWWILLPIPTSIIYSDYQPPIKHKLK
SIO_010081: LOC117310055
subclass of: SO_0000673
so part of: LOC117310055
location: complement(join(6054431..6054634,6065537..6065673,6069813..6069874))
location: region:6054431-6069874:-1
so has part: feature:6069813-6069874:-1:exon
so has part: feature:6065537-6065673:-1:exon
so has part: feature:6054431-6054634:-1:exon

XP_033704817.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6069813-6069874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6065537-6065673:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6054431-6054634:-1:exon

LOC101329370
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101329370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6070047..6094864)
location: region:6070047-6094864:-1
so has part: feature:6070047-6094864:-1:exon
subclass of: SO_0000010

101329370
type: Gene
SIO_000068: ncbigene

position:6070047:-1
position: 6070047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6094864:-1
position: 6094864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6070047-6094864:-1:exon

LOC101329370
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101329370
product: zinc finger protein 583-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 45% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033848927.1
SIO_010081: LOC101329370
subclass of: SO_0000673
so part of: LOC101329370
location: complement(join(6070047..6070208,6073104..6073349,6074020..6074577,6075633..6075678,6083293..6083486,6083565..6083906,6085086..6085140,6085861..6085987,6093571..6093785,6094615..6094864))
location: region:6070047-6094864:-1
so has part: feature:6094615-6094864:-1:exon
so has part: feature:6093571-6093785:-1:exon
so has part: feature:6085861-6085987:-1:exon
so has part: feature:6085086-6085140:-1:exon
so has part: feature:6083565-6083906:-1:exon
so has part: feature:6083293-6083486:-1:exon
so has part: feature:6075633-6075678:-1:exon
so has part: feature:6074020-6074577:-1:exon
so has part: feature:6073104-6073349:-1:exon
so has part: feature:6070047-6070208:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6094615-6094864:-1:exon

position:6094615:-1
position: 6094615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6093571-6093785:-1:exon

position:6093571:-1
position: 6093571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6093785:-1
position: 6093785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6085861-6085987:-1:exon

position:6085861:-1
position: 6085861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6085987:-1
position: 6085987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6085086-6085140:-1:exon

position:6085086:-1
position: 6085086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6085140:-1
position: 6085140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6083565-6083906:-1:exon

position:6083565:-1
position: 6083565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6083906:-1
position: 6083906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6083293-6083486:-1:exon

position:6083293:-1
position: 6083293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6083486:-1
position: 6083486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6075633-6075678:-1:exon

position:6075633:-1
position: 6075633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6075678:-1
position: 6075678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6074020-6074577:-1:exon

position:6074020:-1
position: 6074020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6074577:-1
position: 6074577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6073104-6073349:-1:exon

position:6073104:-1
position: 6073104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6073349:-1
position: 6073349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6070047-6070208:-1:exon

position:6070208:-1
position: 6070208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101329370
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101329370
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 583-like
translation: MAAMPLGPSSGSRTDQTLKLTLAHPLTVFSSHRLVNLLGHKSLSLLGPSRIQEFHLLFIENPAISLDLSPGLNPASLLPISGTGGLRPRIPTHQMRGHRPGEDWQIDFTHMPRCKRFRYLLTLIDTFSGWIEDRETSDTVATILFQHIIPRFGLPESVTFEDVAINFTQEEWALLDTSQKTLFRNVMLENITHLVSVGYQISKSDVISQLEQGKELRKRNVSKQCGNSLSQGSFLDGQGHIHTRGKSCECPFCGKAFSNSSSLRRHKMIHTGEKPYKCHLCGSGFFQSSNLRNHKRIHTGEKPYKCHVCGKVFSQSSYLKEHEKIHTGEKEKHYACHKCGKAFSQSSGLSQHKRIHTGEKPHICLLCGKAFSHSSELTRHKRTHTGEKPYKCQQSTAAPCLCRRPSNTSRIFWLQSSRSAQREKKVRQNVGGKENTKTRTRRTQVTLGTLAQTPEDKSHRDVLRDRDRGTSVLSLPTPPHPLISEVLPRQLQARNAGPQTHSRSASPSYTHRKPQPRLSPHTCMPSASSSSRTLGSRQLAAVYLRGGVQDGVSDSCFWTSRGRHRPTSGSRTPGAAGLLRLRVTTRRASQSSTISRSRSERALLRFKGNGPPADVWTSGEKQA
SIO_010081: LOC101329370
subclass of: SO_0000673
so part of: LOC101329370
location: complement(join(6073265..6073349,6074020..6074577,6075633..6075678,6083293..6083486,6083565..6083906,6085086..6085140,6085861..6085987,6093571..6093785,6094615..6094864))
location: region:6073265-6094864:-1
so has part: feature:6094615-6094864:-1:exon
so has part: feature:6093571-6093785:-1:exon
so has part: feature:6085861-6085987:-1:exon
so has part: feature:6085086-6085140:-1:exon
so has part: feature:6083565-6083906:-1:exon
so has part: feature:6083293-6083486:-1:exon
so has part: feature:6075633-6075678:-1:exon
so has part: feature:6074020-6074577:-1:exon
so has part: feature:6073265-6073349:-1:exon

XP_033704818.1
type: Protein
SIO_000068: ncbiprotein

position:6073265:-1
position: 6073265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6094615-6094864:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6093571-6093785:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6085861-6085987:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6085086-6085140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6083565-6083906:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6083293-6083486:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6075633-6075678:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6074020-6074577:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6073265-6073349:-1:exon

LOC117310060
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6106562..6124338
location: region:6106562-6124338:1
so has part: feature:6106562-6124338:1:exon
subclass of: SO_0000011

117310060
type: Gene
SIO_000068: ncbigene

position:6106562:1
position: 6106562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6124338:1
position: 6124338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6106562-6124338:1:exon

LOC117310060
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117310060
product: uncharacterized LOC117310060
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_004524321.1
SIO_010081: LOC117310060
subclass of: SO_0000673
so part of: LOC117310060
location: join(6106562..6109431,6120613..6124338)
location: region:6106562-6124338:1
so has part: feature:6106562-6109431:1:exon
so has part: feature:6120613-6124338:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6106562-6109431:1:exon

position:6109431:1
position: 6109431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6120613-6124338:1:exon

position:6120613:1
position: 6120613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109547656
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC109547656
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6172060..6181488)
location: region:6172060-6181488:-1
so has part: feature:6172060-6181488:-1:exon
subclass of: SO_0000011

109547656
type: Gene
SIO_000068: ncbigene

position:6172060:-1
position: 6172060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6181488:-1
position: 6181488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6172060-6181488:-1:exon

LOC109547656
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547656
product: uncharacterized LOC109547656, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 138 samples with support for all annotated introns
transcript id: XR_002173571.2
SIO_010081: LOC109547656
subclass of: SO_0000673
so part of: LOC109547656
location: complement(join(6172060..6175833,6179221..6181488))
location: region:6172060-6181488:-1
so has part: feature:6179221-6181488:-1:exon
so has part: feature:6172060-6175833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6179221-6181488:-1:exon

position:6179221:-1
position: 6179221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6172060-6175833:-1:exon

position:6175833:-1
position: 6175833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109547656
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547656
product: uncharacterized LOC109547656, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 63 samples with support for all annotated introns
transcript id: XR_002173572.2
SIO_010081: LOC109547656
subclass of: SO_0000673
so part of: LOC109547656
location: complement(join(6172060..6175833,6179000..6181488))
location: region:6172060-6181488:-1
so has part: feature:6179000-6181488:-1:exon
so has part: feature:6172060-6175833:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6179000-6181488:-1:exon

position:6179000:-1
position: 6179000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6172060-6175833:-1:exon

LOC101326055
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101326055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6189847..6191043)
location: region:6189847-6191043:-1
so has part: feature:6189847-6191043:-1:exon
subclass of: SO_0000010

101326055
type: Gene
SIO_000068: ncbigene

position:6189847:-1
position: 6189847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6191043:-1
position: 6191043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6189847-6191043:-1:exon

LOC101326055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101326055
product: beta-defensin 103A-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 144 samples with support for all annotated introns
transcript id: XM_004319017.3
SIO_010081: LOC101326055
subclass of: SO_0000673
so part of: LOC101326055
location: complement(join(6189847..6190206,6190869..6191043))
location: region:6189847-6191043:-1
so has part: feature:6190869-6191043:-1:exon
so has part: feature:6189847-6190206:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6190869-6191043:-1:exon

position:6190869:-1
position: 6190869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6189847-6190206:-1:exon

position:6190206:-1
position: 6190206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101326055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101326055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: beta-defensin 103A-like
translation: MRVYYLLFVLFFLFLLPVSGSGTIVNILQKYYCRVRGGRCALFGCLPREIPLGLCSHSGRKCCRRER
SIO_010081: LOC101326055
subclass of: SO_0000673
so part of: LOC101326055
location: complement(join(6190061..6190206,6190869..6190926))
location: region:6190061-6190926:-1
so has part: feature:6190869-6190926:-1:exon
so has part: feature:6190061-6190206:-1:exon

XP_004319065.1
type: Protein
SIO_000068: ncbiprotein

position:6190061:-1
position: 6190061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6190926:-1
position: 6190926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6190869-6190926:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6190061-6190206:-1:exon

LOC101326915
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101326915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6209342..6212164)
location: region:6209342-6212164:-1
so has part: feature:6209342-6212164:-1:exon
subclass of: SO_0000010

101326915
type: Gene
SIO_000068: ncbigene

position:6209342:-1
position: 6209342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6212164:-1
position: 6212164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6209342-6212164:-1:exon

LOC101326915
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101326915
product: sperm-associated antigen 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_033848855.1
SIO_010081: LOC101326915
subclass of: SO_0000673
so part of: LOC101326915
location: complement(join(6209342..6209643,6210435..6210561,6210661..6212164))
location: region:6209342-6212164:-1
so has part: feature:6210661-6212164:-1:exon
so has part: feature:6210435-6210561:-1:exon
so has part: feature:6209342-6209643:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6210661-6212164:-1:exon

position:6210661:-1
position: 6210661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6210435-6210561:-1:exon

position:6210435:-1
position: 6210435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6210561:-1
position: 6210561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6209342-6209643:-1:exon

position:6209643:-1
position: 6209643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101326915
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101326915
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sperm-associated antigen 11-like
translation: MASESTPHLELRYCARLFFKSGDIPPAIRNVICLMQHGTCRLFFCYAGEKKAEICSDPWNRCCIPHTEEEKINK
SIO_010081: LOC101326915
subclass of: SO_0000673
so part of: LOC101326915
location: complement(join(6209483..6209643,6210435..6210498))
location: region:6209483-6210498:-1
so has part: feature:6210435-6210498:-1:exon
so has part: feature:6209483-6209643:-1:exon

XP_033704746.1
type: Protein
SIO_000068: ncbiprotein

position:6209483:-1
position: 6209483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6210498:-1
position: 6210498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6210435-6210498:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6209483-6209643:-1:exon

LOC101328791
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101328791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6213149..6232278
location: region:6213149-6232278:1
so has part: feature:6213149-6232278:1:exon
subclass of: SO_0000010

101328791
type: Gene
SIO_000068: ncbigene

position:6213149:1
position: 6213149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6232278:1
position: 6232278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6213149-6232278:1:exon

LOC101328791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101328791
product: zinc finger protein 705A-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_019921565.2
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6213149..6213444,6216313..6216465,6220688..6220975,6221255..6221325,6226798..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6232278)
location: region:6213149-6232278:1
so has part: feature:6213149-6213444:1:exon
so has part: feature:6216313-6216465:1:exon
so has part: feature:6220688-6220975:1:exon
so has part: feature:6221255-6221325:1:exon
so has part: feature:6226798-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6232278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6213149-6213444:1:exon

position:6213444:1
position: 6213444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6216313-6216465:1:exon

position:6216313:1
position: 6216313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6216465:1
position: 6216465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6220688-6220975:1:exon

position:6220688:1
position: 6220688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6220975:1
position: 6220975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6221255-6221325:1:exon

position:6221255:1
position: 6221255
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6221325:1
position: 6221325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6226798-6226884:1:exon

position:6226798:1
position: 6226798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6226884:1
position: 6226884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6228692-6228818:1:exon

position:6228692:1
position: 6228692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6228818:1
position: 6228818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6229539-6229634:1:exon

position:6229539:1
position: 6229539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6229634:1
position: 6229634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6230125-6230201:1:exon

position:6230125:1
position: 6230125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6230201:1
position: 6230201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6230662-6232278:1:exon

position:6230662:1
position: 6230662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101328791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101328791
product: zinc finger protein 705A-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019921568.2
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6213149..6213444,6220688..6220975,6221255..6221325,6226798..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6232278)
location: region:6213149-6232278:1
so has part: feature:6213149-6213444:1:exon
so has part: feature:6220688-6220975:1:exon
so has part: feature:6221255-6221325:1:exon
so has part: feature:6226798-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6232278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6213149-6213444:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6220688-6220975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6221255-6221325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6226798-6226884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6228692-6228818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6229539-6229634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6230125-6230201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6230662-6232278:1:exon

LOC101328791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101328791
product: zinc finger protein 705A-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_019921566.2
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6213149..6213347,6216313..6216465,6220688..6220975,6221255..6221325,6226798..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6232278)
location: region:6213149-6232278:1
so has part: feature:6213149-6213347:1:exon
so has part: feature:6216313-6216465:1:exon
so has part: feature:6220688-6220975:1:exon
so has part: feature:6221255-6221325:1:exon
so has part: feature:6226798-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6232278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6213149-6213347:1:exon

position:6213347:1
position: 6213347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6216313-6216465:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6220688-6220975:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6221255-6221325:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6226798-6226884:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6228692-6228818:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6229539-6229634:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6230125-6230201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6230662-6232278:1:exon

LOC101328791
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101328791
product: zinc finger protein 705A-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_019921567.2
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6213149..6213347,6220688..6220975,6221255..6221325,6226798..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6232278)
location: region:6213149-6232278:1
so has part: feature:6213149-6213347:1:exon
so has part: feature:6220688-6220975:1:exon
so has part: feature:6221255-6221325:1:exon
so has part: feature:6226798-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6232278:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6213149-6213347:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6220688-6220975:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6221255-6221325:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6226798-6226884:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6228692-6228818:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6229539-6229634:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6230125-6230201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6230662-6232278:1:exon

LOC101328791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101328791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 705A-like
translation: MQPLESVTFEDVAISFTQEEWALLDTSQRKLFRDVMLENISHLVSVGYQHCKSDVIFQLDQGEELWIEGRGFFQSHSPGRESALKEMLATQHISRKDTSTTIPLQVSHTPEDPFECNDLGEDFTHSSTLSQHLLTHTEKTPCINKQCKKSLSDQSYLNQHKQIHTRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKAFSKCSALRRHERTHTGEKPYECHLCGKSFSQCSALRRHEGTHNGEKIMNAFSKYSDLR
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6226873..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6231312)
location: region:6226873-6231312:1
so has part: feature:6226873-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6231312:1:exon

XP_019777124.1
type: Protein
SIO_000068: ncbiprotein

position:6226873:1
position: 6226873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6231312:1
position: 6231312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6226873-6226884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6228692-6228818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6229539-6229634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6230125-6230201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6230662-6231312:1:exon

LOC101328791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101328791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 705A-like
translation: MQPLESVTFEDVAISFTQEEWALLDTSQRKLFRDVMLENISHLVSVGYQHCKSDVIFQLDQGEELWIEGRGFFQSHSPGRESALKEMLATQHISRKDTSTTIPLQVSHTPEDPFECNDLGEDFTHSSTLSQHLLTHTEKTPCINKQCKKSLSDQSYLNQHKQIHTRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKAFSKCSALRRHERTHTGEKPYECHLCGKSFSQCSALRRHEGTHNGEKIMNAFSKYSDLR
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6226873..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6231312)
location: region:6226873-6231312:1
so has part: feature:6226873-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6231312:1:exon

XP_019777125.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6226873-6226884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6228692-6228818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6229539-6229634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6230125-6230201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6230662-6231312:1:exon

LOC101328791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101328791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 705A-like
translation: MQPLESVTFEDVAISFTQEEWALLDTSQRKLFRDVMLENISHLVSVGYQHCKSDVIFQLDQGEELWIEGRGFFQSHSPGRESALKEMLATQHISRKDTSTTIPLQVSHTPEDPFECNDLGEDFTHSSTLSQHLLTHTEKTPCINKQCKKSLSDQSYLNQHKQIHTRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKAFSKCSALRRHERTHTGEKPYECHLCGKSFSQCSALRRHEGTHNGEKIMNAFSKYSDLR
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6226873..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6231312)
location: region:6226873-6231312:1
so has part: feature:6226873-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6231312:1:exon

XP_019777126.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6226873-6226884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6228692-6228818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6229539-6229634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6230125-6230201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6230662-6231312:1:exon

LOC101328791
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101328791
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 705A-like
translation: MQPLESVTFEDVAISFTQEEWALLDTSQRKLFRDVMLENISHLVSVGYQHCKSDVIFQLDQGEELWIEGRGFFQSHSPGRESALKEMLATQHISRKDTSTTIPLQVSHTPEDPFECNDLGEDFTHSSTLSQHLLTHTEKTPCINKQCKKSLSDQSYLNQHKQIHTRGKSCECHLCGKAFSNCSSLRRHEMTHTGEKPYECHICGNAFIQSSDLRKHNLTHTGEKPYECHLCGKAFSQSSNLRQHERTHTGEQPYECQLCGKAFSKCSALRRHERTHTGEKPYECHLCGKSFSQCSALRRHEGTHNGEKIMNAFSKYSDLR
SIO_010081: LOC101328791
subclass of: SO_0000673
so part of: LOC101328791
location: join(6226873..6226884,6228692..6228818,6229539..6229634,6230125..6230201,6230662..6231312)
location: region:6226873-6231312:1
so has part: feature:6226873-6226884:1:exon
so has part: feature:6228692-6228818:1:exon
so has part: feature:6229539-6229634:1:exon
so has part: feature:6230125-6230201:1:exon
so has part: feature:6230662-6231312:1:exon

XP_019777127.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6226873-6226884:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6228692-6228818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6229539-6229634:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6230125-6230201:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6230662-6231312:1:exon

LOC117310056
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6264404..6269250
location: region:6264404-6269250:1
so has part: feature:6264404-6269250:1:exon
subclass of: SO_0000010

117310056
type: Gene
SIO_000068: ncbigene

position:6264404:1
position: 6264404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6269250:1
position: 6269250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6264404-6269250:1:exon

LOC117310056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC117310056
product: zinc finger protein 596-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033848928.1
SIO_010081: LOC117310056
subclass of: SO_0000673
so part of: LOC117310056
location: join(6264404..6264415,6266081..6266227,6268091..6269250)
location: region:6264404-6269250:1
so has part: feature:6264404-6264415:1:exon
so has part: feature:6266081-6266227:1:exon
so has part: feature:6268091-6269250:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6264404-6264415:1:exon

position:6264415:1
position: 6264415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6266081-6266227:1:exon

position:6266081:1
position: 6266081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6266227:1
position: 6266227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6268091-6269250:1:exon

position:6268091:1
position: 6268091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117310056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC117310056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like
translation: MEPLESVTFEDVAINFTQEEWALLDTSQKTLFRNVMLENITHLVSVGESVNTDVSHTQGDPVGWTDLSDEFTPRSSPQHSPIPLRRKSNVSKQHGKSLSQGSFLDGQDHIHTRAKSFECPLCGKAFSTGFRLRQHKMIHTEEKQYKCHVCGKVFNQSSLVKRHEKTHTGEKPYECCLCKKTFSQISYLRKHEKIHPREKPYECHLCGKTFNQRSGLRTHNKIHTGEKPHVCLLCGKAFTQTSELTRHIRTHTGEKPYECQRCGNAFSQHANLRRHERTHTGERPYECQWCGKCFSRGSSLRRHEGTQHWRESQEGPQ
SIO_010081: LOC117310056
subclass of: SO_0000673
so part of: LOC117310056
location: join(6264404..6264415,6266081..6266227,6268091..6268885)
location: region:6264404-6268885:1
so has part: feature:6264404-6264415:1:exon
so has part: feature:6266081-6266227:1:exon
so has part: feature:6268091-6268885:1:exon

XP_033704819.1
type: Protein
SIO_000068: ncbiprotein

position:6268885:1
position: 6268885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6264404-6264415:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6266081-6266227:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6268091-6268885:1:exon

LOC101329080
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101329080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6277263..6279841
location: region:6277263-6279841:1
so has part: feature:6277263-6279841:1:exon
subclass of: SO_0000010

101329080
type: Gene
SIO_000068: ncbigene

position:6277263:1
position: 6277263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6279841:1
position: 6279841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6277263-6279841:1:exon

LOC101329080
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101329080
product: putative protein FAM90A12P
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_004325249.2
SIO_010081: LOC101329080
subclass of: SO_0000673
so part of: LOC101329080
location: join(6277263..6277382,6277809..6278008,6278447..6278588,6279152..6279841)
location: region:6277263-6279841:1
so has part: feature:6277263-6277382:1:exon
so has part: feature:6277809-6278008:1:exon
so has part: feature:6278447-6278588:1:exon
so has part: feature:6279152-6279841:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6277263-6277382:1:exon

position:6277382:1
position: 6277382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6277809-6278008:1:exon

position:6277809:1
position: 6277809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6278008:1
position: 6278008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6278447-6278588:1:exon

position:6278447:1
position: 6278447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6278588:1
position: 6278588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6279152-6279841:1:exon

position:6279152:1
position: 6279152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC101329080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101329080
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein FAM90A12P
translation: MAGRCRQLGPCKLSEAQQVRKQNLGAGRQVAPPPRDEDPRVKCRDCGAFGHKARSLRCPMKRWHGALAPQPLGSKLGKENLEPQKLQDLQTPGTPNMAEREKGERQRKEEQQRKLLQRFPRKPQGWRQQYWKEGTESCHYLRVSLLVHALSSSGHPNMPTLTQASKRKPLRDPDLPSRSPVRRDDRKCTHPAVSLISRSLVQDSKSSTKAPGKRSVQIPIQTCLNPPKKPRLSPIQPPQKSTLTADLGASQNLPPPPSTTGPTGTPQVSRKTPAQGQSLALKPPLDRSRPNSVQACTRHHPPPISHVPGQPLRMLFVRVDEGRWSCRYVTPPPLPRPEQSAPPPAGRKPERHWAPGPRSVLYDDLQVSSSSEDSDWEGHANGS
SIO_010081: LOC101329080
subclass of: SO_0000673
so part of: LOC101329080
location: join(6277263..6277382,6277809..6278008,6278447..6278588,6279152..6279841)
location: region:6277263-6279841:1
so has part: feature:6277263-6277382:1:exon
so has part: feature:6277809-6278008:1:exon
so has part: feature:6278447-6278588:1:exon
so has part: feature:6279152-6279841:1:exon

XP_004325297.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6277263-6277382:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6277809-6278008:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6278447-6278588:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6279152-6279841:1:exon

LOC117310057
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6286650..6290495
location: region:6286650-6290495:1
so has part: feature:6286650-6290495:1:exon
subclass of: SO_0000010

117310057
type: Gene
SIO_000068: ncbigene

position:6286650:1
position: 6286650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6290495:1
position: 6290495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6286650-6290495:1:exon

LOC117310057
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC117310057
product: zinc finger protein 596-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_033848929.1
SIO_010081: LOC117310057
subclass of: SO_0000673
so part of: LOC117310057
location: join(6286650..6286661,6287777..6287903,6288625..6288720,6289247..6289322,6289880..6290495)
location: region:6286650-6290495:1
so has part: feature:6286650-6286661:1:exon
so has part: feature:6287777-6287903:1:exon
so has part: feature:6288625-6288720:1:exon
so has part: feature:6289247-6289322:1:exon
so has part: feature:6289880-6290495:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6286650-6286661:1:exon

position:6286661:1
position: 6286661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6287777-6287903:1:exon

position:6287777:1
position: 6287777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6287903:1
position: 6287903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6288625-6288720:1:exon

position:6288625:1
position: 6288625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6288720:1
position: 6288720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6289247-6289322:1:exon

position:6289247:1
position: 6289247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6289322:1
position: 6289322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6289880-6290495:1:exon

position:6289880:1
position: 6289880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117310057
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC117310057
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596-like
translation: MEPLESVTFEDVAINFTQEEWALLDTSQKTLFRNVMLENITHLVSVGYQISKSDVISQLEQGKELWSEATGCLQGQSPGSESPLIQQEIIFMQQVYRKHISHTIRKSNVSKQHGKSLSQGSFLDKQDHIHTRAKSYECPLCGKVFSRCSTLIRHKMIHTGEKPFKCNLCGKVFNQSSSLKQHEKTHTGEKCYECHQCGKAFLQSSGLSSHKKIHTGEKPHVCLECGKAFSHSSGLSSHKRIHTGEKPHVCLLCGKAFSEHAKLREHERTHTGERPYECQWCGKCFSRGSSLRRHEGTQHWRESQEGPQ
SIO_010081: LOC117310057
subclass of: SO_0000673
so part of: LOC117310057
location: join(6286650..6286661,6287777..6287903,6288625..6288720,6289247..6289322,6289880..6290495)
location: region:6286650-6290495:1
so has part: feature:6286650-6286661:1:exon
so has part: feature:6287777-6287903:1:exon
so has part: feature:6288625-6288720:1:exon
so has part: feature:6289247-6289322:1:exon
so has part: feature:6289880-6290495:1:exon

XP_033704820.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6286650-6286661:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6287777-6287903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6288625-6288720:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6289247-6289322:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6289880-6290495:1:exon

XKR5
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: XKR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6295122..6317304
location: region:6295122-6317304:1
so has part: feature:6295122-6317304:1:exon
subclass of: SO_0000010

101331341
type: Gene
SIO_000068: ncbigene

position:6295122:1
position: 6295122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6317304:1
position: 6317304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6295122-6317304:1:exon

XKR5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: XKR5
product: XK related 5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033848852.1
SIO_010081: XKR5
subclass of: SO_0000673
so part of: XKR5
location: join(6295122..6295179,6297041..6297224,6304215..6304399,6305162..6305371,6307791..6307960,6312174..6312285,6315834..6317304)
location: region:6295122-6317304:1
so has part: feature:6295122-6295179:1:exon
so has part: feature:6297041-6297224:1:exon
so has part: feature:6304215-6304399:1:exon
so has part: feature:6305162-6305371:1:exon
so has part: feature:6307791-6307960:1:exon
so has part: feature:6312174-6312285:1:exon
so has part: feature:6315834-6317304:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6295122-6295179:1:exon

position:6295179:1
position: 6295179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6297041-6297224:1:exon

position:6297041:1
position: 6297041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6297224:1
position: 6297224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6304215-6304399:1:exon

position:6304215:1
position: 6304215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6304399:1
position: 6304399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6305162-6305371:1:exon

position:6305162:1
position: 6305162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6305371:1
position: 6305371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6307791-6307960:1:exon

position:6307791:1
position: 6307791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6307960:1
position: 6307960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6312174-6312285:1:exon

position:6312174:1
position: 6312174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6312285:1
position: 6312285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6315834-6317304:1:exon

position:6315834:1
position: 6315834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XKR5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: XKR5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 5
translation: MHAGVLGLSALLLAAEQSARLCTVVYYFTTGRLLWGWLGLSVLLPGFLVQGLSYLWFREDGHQSRCSLVVLHLLQLGVWKRHWDAVAPVLRNEGEAPASDQLRMQEADLSALRLLEALLQVGPHLLLQTYVFLASDFTGIVPGMSALCSWSVLSWALVCYARAMGAMKPGHLSMPWTALGCQLLWRMGMVGARVLSLVLFFQVYRVWVLVVAGAHWLVMTFWLVAQQSDIVDSTCRWRLFNLLTGAVYILCYLNFWDSPSRSRMATFYTVMLLENTILVLLATDFLQGASRTSLWTVAGVLSGFLIGSVSLVIYYSLLHPKSTDIWQGFVRKSCGVAGGDKAEGNSPPRASGPAGEGPESLGTCQEESDVLTSLGKPPSPQWGPPQAGMESQMAGEASFLSHHHWLLVKLALKTGNVSKINALFGEDNPGFFCSPPWGLSQHCNQERKPPSSQQEPPLSPHKPLTSEEGSELRVVLRAEADETSNYVSFASDDRDKTPAQKPSAVQQEGSPKEGDGAASGVQGRGAGGWLGGGEGQESSTLYFSATTEGAMSSHQDGGRATLTMSVSGRRLGEGSPARPASPLPATKPFPATMANISPILGTGPGRSFHPSGRALGGSGHGGQQESTRDQNHPATAGTQMPWPKVSPRPAVEPCLTSTPKSESTHRDSPWRERLKTETSFFI
SIO_010081: XKR5
subclass of: SO_0000673
so part of: XKR5
location: join(6295122..6295179,6297041..6297224,6304215..6304399,6305162..6305371,6307791..6307960,6312174..6312285,6315834..6316963)
location: region:6295122-6316963:1
so has part: feature:6295122-6295179:1:exon
so has part: feature:6297041-6297224:1:exon
so has part: feature:6304215-6304399:1:exon
so has part: feature:6305162-6305371:1:exon
so has part: feature:6307791-6307960:1:exon
so has part: feature:6312174-6312285:1:exon
so has part: feature:6315834-6316963:1:exon

XP_033704743.1
type: Protein
SIO_000068: ncbiprotein

position:6316963:1
position: 6316963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6295122-6295179:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6297041-6297224:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6304215-6304399:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6305162-6305371:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6307791-6307960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6312174-6312285:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6315834-6316963:1:exon

AGPAT5
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6358768..6421406)
location: region:6358768-6421406:-1
so has part: feature:6358768-6421406:-1:exon
subclass of: SO_0000010

101323875
type: Gene
SIO_000068: ncbigene

position:6358768:-1
position: 6358768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6421406:-1
position: 6421406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6358768-6421406:-1:exon

AGPAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGPAT5
product: 1-acylglycerol-3-phosphate O-acyltransferase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_019921450.2
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6358768..6361307,6363704..6363827,6370022..6370183,6384136..6384226,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421406))
location: region:6358768-6421406:-1
so has part: feature:6420842-6421406:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370183:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6358768-6361307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421406:-1:exon

position:6420842:-1
position: 6420842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

position:6415937:-1
position: 6415937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6416089:-1
position: 6416089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

position:6403404:-1
position: 6403404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6403473:-1
position: 6403473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

position:6397669:-1
position: 6397669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6397784:-1
position: 6397784
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6384136-6384226:-1:exon

position:6384136:-1
position: 6384136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6384226:-1
position: 6384226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6370022-6370183:-1:exon

position:6370022:-1
position: 6370022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6370183:-1
position: 6370183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6363704-6363827:-1:exon

position:6363704:-1
position: 6363704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6363827:-1
position: 6363827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6358768-6361307:-1:exon

position:6361307:-1
position: 6361307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

AGPAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGPAT5
product: 1-acylglycerol-3-phosphate O-acyltransferase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019921451.2
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6358768..6361307,6363704..6363827,6370022..6370081,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421406))
location: region:6358768-6421406:-1
so has part: feature:6420842-6421406:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370081:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6358768-6361307:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421406:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394402-6394491:-1:exon

position:6394402:-1
position: 6394402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6394491:-1
position: 6394491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6370022-6370081:-1:exon

position:6370081:-1
position: 6370081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6358768-6361307:-1:exon

AGPAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGPAT5
product: 1-acylglycerol-3-phosphate O-acyltransferase 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019921453.2
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6358768..6361307,6363704..6363827,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421405))
location: region:6358768-6421405:-1
so has part: feature:6420842-6421405:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6358768-6361307:-1:exon

position:6421405:-1
position: 6421405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421405:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394402-6394491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6358768-6361307:-1:exon

AGPAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGPAT5
product: 1-acylglycerol-3-phosphate O-acyltransferase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019921449.2
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6358768..6361307,6363704..6363827,6370022..6370183,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421404))
location: region:6358768-6421404:-1
so has part: feature:6420842-6421404:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370183:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6358768-6361307:-1:exon

position:6421404:-1
position: 6421404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421404:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394402-6394491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6370022-6370183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6358768-6361307:-1:exon

AGPAT5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: AGPAT5
product: 1-acylglycerol-3-phosphate O-acyltransferase 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 2 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 169 samples with support for all annotated introns
transcript id: XM_019921452.2
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6358768..6361307,6363704..6363827,6370022..6370183,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6420842..6421401))
location: region:6358768-6421401:-1
so has part: feature:6420842-6421401:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370183:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6358768-6361307:-1:exon

position:6421401:-1
position: 6421401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421401:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394402-6394491:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6370022-6370183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6358768-6361307:-1:exon

AGPAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X4
translation: MLLSLVLHMYSMCCVLPAAVLLGTAPTYVLAWGAWRLLSAFLPSRFYQAVDDRLYCIYQSMVLFFFENCTGVQILLYGDLPKNKENIIYLANHQSTVDWIVADMLAIRQNALGHVRYVLKDGLKWLPLYGCYFSQHGGIYVKRSAKFNEKEMRKKLQSYINAGAPMYLVIFPEGTRYNPELTKVISASQTFAAQEGLPVLKHVLTPRIKATHVAFDSMKNYLDAIYDVTVAFEGTVDDKGQRKEAPSMAEFLCKECPKIHIHIDRIDKKDVPEEQVYMKRWLHERFEIKDKLLIEFYDSLDPERRNKFPGESVNSKLSLKKTLPSFLILSGLTAGMLMTEAGRKLYVKTWVYGTLIGCLWVSIKA
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6361082..6361307,6363704..6363827,6370022..6370183,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6420842..6421060))
location: region:6361082-6421060:-1
so has part: feature:6420842-6421060:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370183:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6361082-6361307:-1:exon

XP_019777011.1
type: Protein
SIO_000068: ncbiprotein

position:6361082:-1
position: 6361082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6421060:-1
position: 6421060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6394402-6394491:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6370022-6370183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6361082-6361307:-1:exon

AGPAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X2
translation: MLLSLVLHMYSMCCVLPAAVLLGTAPTYVLAWGAWRLLSAFLPSRFYQAVDDRLYCIYQSMVLFFFENCTGVQMGGENMHSTHGSKTENKVRDLIKEGILEQLAMQRRLCLLVSKNLYFLQVLKILLYGDLPKNKENIIYLANHQSTVDWIVADMLAIRQNALGHVRYVLKDGLKWLPLYGCYFSQMYLVIFPEGTRYNPELTKVISASQTFAAQEGLPVLKHVLTPRIKATHVAFDSMKNYLDAIYDVTVAFEGTVDDKGQRKEAPSMAEFLCKECPKIHIHIDRIDKKDVPEEQVYMKRWLHERFEIKDKLLIEFYDSLDPERRNKFPGESVNSKLSLKKTLPSFLILSGLTAGMLMTEAGRKLYVKTWVYGTLIGCLWVSIKA
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6361082..6361307,6363704..6363827,6370022..6370183,6384136..6384226,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421060))
location: region:6361082-6421060:-1
so has part: feature:6420842-6421060:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370183:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6361082-6361307:-1:exon

XP_019777009.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6370022-6370183:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6361082-6361307:-1:exon

AGPAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X5
translation: MLLSLVLHMYSMCCVLPAAVLLGTAPTYVLAWGAWRLLSAFLPSRFYQAVDDRLYCIYQSMVLFFFENCTGVQMGGENMHSTHGSKTENKVRDLIKEGILEQLAMQRRLCLLVSKNLYFLQVLKILLYGDLPKNKENIIYLANHQSTVDWIVADMLAIRQNALGHVRYVLKDGLKWLPLYGCYFSQHGGIYVKRSAKFNEKEMRKKLQSYINAGAPMYLVIFPEGTRYNPELTKVISASQTFAAQEEFLCKECPKIHIHIDRIDKKDVPEEQVYMKRWLHERFEIKDKLLIEFYDSLDPERRNKFPGESVNSKLSLKKTLPSFLILSGLTAGMLMTEAGRKLYVKTWVYGTLIGCLWVSIKA
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6361082..6361307,6363704..6363827,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421060))
location: region:6361082-6421060:-1
so has part: feature:6420842-6421060:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6361082-6361307:-1:exon

XP_019777012.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394402-6394491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6361082-6361307:-1:exon

AGPAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X3
translation: MLLSLVLHMYSMCCVLPAAVLLGTAPTYVLAWGAWRLLSAFLPSRFYQAVDDRLYCIYQSMVLFFFENCTGVQMGGENMHSTHGSKTENKVRDLIKEGILEQLAMQRRLCLLVSKNLYFLQVLKILLYGDLPKNKENIIYLANHQSTVDWIVADMLAIRQNALGHVRYVLKDGLKWLPLYGCYFSQHGGIYVKRSAKFNEKEMRKKLQSYINAGAPMYLVIFPEGTRYNPELTKVISASQTFAAQEVAFEGTVDDKGQRKEAPSMAEFLCKECPKIHIHIDRIDKKDVPEEQVYMKRWLHERFEIKDKLLIEFYDSLDPERRNKFPGESVNSKLSLKKTLPSFLILSGLTAGMLMTEAGRKLYVKTWVYGTLIGCLWVSIKA
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6361082..6361307,6363704..6363827,6370022..6370081,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421060))
location: region:6361082-6421060:-1
so has part: feature:6420842-6421060:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370081:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6361082-6361307:-1:exon

XP_019777010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394402-6394491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6370022-6370081:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6361082-6361307:-1:exon

AGPAT5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: AGPAT5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X1
translation: MLLSLVLHMYSMCCVLPAAVLLGTAPTYVLAWGAWRLLSAFLPSRFYQAVDDRLYCIYQSMVLFFFENCTGVQMGGENMHSTHGSKTENKVRDLIKEGILEQLAMQRRLCLLVSKNLYFLQVLKILLYGDLPKNKENIIYLANHQSTVDWIVADMLAIRQNALGHVRYVLKDGLKWLPLYGCYFSQHGGIYVKRSAKFNEKEMRKKLQSYINAGAPMYLVIFPEGTRYNPELTKVISASQTFAAQEGLPVLKHVLTPRIKATHVAFDSMKNYLDAIYDVTVAFEGTVDDKGQRKEAPSMAEFLCKECPKIHIHIDRIDKKDVPEEQVYMKRWLHERFEIKDKLLIEFYDSLDPERRNKFPGESVNSKLSLKKTLPSFLILSGLTAGMLMTEAGRKLYVKTWVYGTLIGCLWVSIKA
SIO_010081: AGPAT5
subclass of: SO_0000673
so part of: AGPAT5
location: complement(join(6361082..6361307,6363704..6363827,6370022..6370183,6384136..6384226,6394402..6394491,6397669..6397784,6403404..6403473,6415937..6416089,6420842..6421060))
location: region:6361082-6421060:-1
so has part: feature:6420842-6421060:-1:exon
so has part: feature:6415937-6416089:-1:exon
so has part: feature:6403404-6403473:-1:exon
so has part: feature:6397669-6397784:-1:exon
so has part: feature:6394402-6394491:-1:exon
so has part: feature:6384136-6384226:-1:exon
so has part: feature:6370022-6370183:-1:exon
so has part: feature:6363704-6363827:-1:exon
so has part: feature:6361082-6361307:-1:exon

XP_019777008.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6420842-6421060:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6415937-6416089:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6403404-6403473:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6397669-6397784:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6394402-6394491:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6384136-6384226:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6370022-6370183:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6363704-6363827:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6361082-6361307:-1:exon

LOC109547630
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC109547630
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6387496..6388810
location: region:6387496-6388810:1
so has part: feature:6387496-6388810:1:exon

109547630
type: Gene
SIO_000068: ncbigene

position:6387496:1
position: 6387496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6388810:1
position: 6388810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6387496-6388810:1:exon

LOC109547630
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC109547630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109547630
subclass of: SO_0000673
so part of: LOC109547630
location: 6387496..6387591
location: region:6387496-6387591:1
so has part: feature:6387496-6387591:1:exon

position:6387591:1
position: 6387591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6387496-6387591:1:exon

LOC109547630
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC109547630
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 33% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC109547630
subclass of: SO_0000673
so part of: LOC109547630
location: 6387703..6388810
location: region:6387703-6388810:1
so has part: feature:6387703-6388810:1:exon

position:6387703:1
position: 6387703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6387703-6388810:1:exon

MCPH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: MCPH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6546230..6776020)
location: region:6546230-6776020:-1
so has part: feature:6546230-6776020:-1:exon
subclass of: SO_0000010

101325437
type: Gene
SIO_000068: ncbigene

position:6546230:-1
position: 6546230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6776020:-1
position: 6776020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6546230-6776020:-1:exon

MCPH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: MCPH1
product: microcephalin 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 7 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_033848746.1
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: complement(join(6546230..6546633,6675934..6676011,6684370..6684618,6700063..6700225,6702655..6702692,6726607..6726715,6741535..6742704,6744169..6744258,6747845..6747988,6749392..6749506,6752514..6752601,6771192..6771310,6774515..6774606,6775643..6776020))
location: region:6546230-6776020:-1
so has part: feature:6775643-6776020:-1:exon
so has part: feature:6774515-6774606:-1:exon
so has part: feature:6771192-6771310:-1:exon
so has part: feature:6752514-6752601:-1:exon
so has part: feature:6749392-6749506:-1:exon
so has part: feature:6747845-6747988:-1:exon
so has part: feature:6744169-6744258:-1:exon
so has part: feature:6741535-6742704:-1:exon
so has part: feature:6726607-6726715:-1:exon
so has part: feature:6702655-6702692:-1:exon
so has part: feature:6700063-6700225:-1:exon
so has part: feature:6684370-6684618:-1:exon
so has part: feature:6675934-6676011:-1:exon
so has part: feature:6546230-6546633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6775643-6776020:-1:exon

position:6775643:-1
position: 6775643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6774515-6774606:-1:exon

position:6774515:-1
position: 6774515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6774606:-1
position: 6774606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6771192-6771310:-1:exon

position:6771192:-1
position: 6771192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6771310:-1
position: 6771310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6752514-6752601:-1:exon

position:6752514:-1
position: 6752514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6752601:-1
position: 6752601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6749392-6749506:-1:exon

position:6749392:-1
position: 6749392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6749506:-1
position: 6749506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6747845-6747988:-1:exon

position:6747845:-1
position: 6747845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6747988:-1
position: 6747988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6744169-6744258:-1:exon

position:6744169:-1
position: 6744169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6744258:-1
position: 6744258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6741535-6742704:-1:exon

position:6741535:-1
position: 6741535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6742704:-1
position: 6742704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6726607-6726715:-1:exon

position:6726607:-1
position: 6726607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6726715:-1
position: 6726715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6702655-6702692:-1:exon

position:6702655:-1
position: 6702655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6702692:-1
position: 6702692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6700063-6700225:-1:exon

position:6700063:-1
position: 6700063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6700225:-1
position: 6700225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6684370-6684618:-1:exon

position:6684370:-1
position: 6684370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6684618:-1
position: 6684618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6675934-6676011:-1:exon

position:6675934:-1
position: 6675934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6676011:-1
position: 6676011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6546230-6546633:-1:exon

position:6546633:-1
position: 6546633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANGPT2
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: ANGPT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6620179..6677066
location: region:6620179-6677066:1
so has part: feature:6620179-6677066:1:exon
subclass of: SO_0000010

101336619
type: Gene
SIO_000068: ncbigene

position:6620179:1
position: 6620179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6677066:1
position: 6677066
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6620179-6677066:1:exon

ANGPT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ANGPT2
product: angiopoietin 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_004315539.3
SIO_010081: ANGPT2
subclass of: SO_0000673
so part of: ANGPT2
location: join(6620179..6620817,6648929..6649084,6652260..6652381,6656927..6657159,6659090..6659217,6664327..6664428,6664982..6665148,6669494..6669624,6672853..6677066)
location: region:6620179-6677066:1
so has part: feature:6620179-6620817:1:exon
so has part: feature:6648929-6649084:1:exon
so has part: feature:6652260-6652381:1:exon
so has part: feature:6656927-6657159:1:exon
so has part: feature:6659090-6659217:1:exon
so has part: feature:6664327-6664428:1:exon
so has part: feature:6664982-6665148:1:exon
so has part: feature:6669494-6669624:1:exon
so has part: feature:6672853-6677066:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6620179-6620817:1:exon

position:6620817:1
position: 6620817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6648929-6649084:1:exon

position:6648929:1
position: 6648929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6649084:1
position: 6649084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6652260-6652381:1:exon

position:6652260:1
position: 6652260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6652381:1
position: 6652381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6656927-6657159:1:exon

position:6656927:1
position: 6656927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6657159:1
position: 6657159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6659090-6659217:1:exon

position:6659090:1
position: 6659090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6659217:1
position: 6659217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6664327-6664428:1:exon

position:6664327:1
position: 6664327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6664428:1
position: 6664428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6664982-6665148:1:exon

position:6664982:1
position: 6664982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6665148:1
position: 6665148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6669494-6669624:1:exon

position:6669494:1
position: 6669494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6669624:1
position: 6669624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6672853-6677066:1:exon

position:6672853:1
position: 6672853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ANGPT2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ANGPT2
product: angiopoietin 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019921512.2
SIO_010081: ANGPT2
subclass of: SO_0000673
so part of: ANGPT2
location: join(6620179..6620817,6648929..6649084,6652260..6652381,6656927..6657159,6659087..6659217,6664327..6664428,6664982..6665148,6669494..6669624,6672853..6673499)
location: region:6620179-6673499:1
so has part: feature:6620179-6620817:1:exon
so has part: feature:6648929-6649084:1:exon
so has part: feature:6652260-6652381:1:exon
so has part: feature:6656927-6657159:1:exon
so has part: feature:6659087-6659217:1:exon
so has part: feature:6664327-6664428:1:exon
so has part: feature:6664982-6665148:1:exon
so has part: feature:6669494-6669624:1:exon
so has part: feature:6672853-6673499:1:exon

position:6673499:1
position: 6673499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6620179-6620817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6648929-6649084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6652260-6652381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6656927-6657159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6659087-6659217:1:exon

position:6659087:1
position: 6659087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6664327-6664428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6664982-6665148:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6669494-6669624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6672853-6673499:1:exon

ANGPT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ANGPT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-2 isoform X1
translation: MWQLVFFTLSCDLLLAAAYSNFRKSMDSIGKRQYQVQHGSCSYTFLLPEMDNCRSPSSAYVPNAVQRDAPLDYDDSVQRLQLLENIMENNTQWLMKLENYIQDNMKKEMVEIQQNAVQNQTAVMIEIGTNLLNQTAEQTRKLTDVEAQVLNQTTRLELQLLEHSLSTNKLEKQILDQTSEINKLQDKNSFLEKKVLDMEDKHIVQLRSIKEEKDQLQVLVSKQNSIIEELEKQLVTATVNNSVLQKQQHDLMETVHNLLTMISTSNSAKHSLIAKEEQIIFRDCAEAFKSGLTTSGIYTLTFPNSTEEIKAYCDMETAGGGWTIIQRREDGSVDFQRTWKEYKVGFGNPSGEHWLGNEFVSQVTNQKRYVLKIHLKDWEGNEAYSLYDHFYLSSEELNYRIHLKGLTGTAGKISSISQPGNDFSTKDADNDKCICKCSQMLTGGWWFDACGPSNLNGMYYPQRQNTNKFNGIKWYYWKGSGYSLKATTMMIRPADF
SIO_010081: ANGPT2
subclass of: SO_0000673
so part of: ANGPT2
location: join(6620530..6620817,6648929..6649084,6652260..6652381,6656927..6657159,6659087..6659217,6664327..6664428,6664982..6665148,6669494..6669624,6672853..6673013)
location: region:6620530-6673013:1
so has part: feature:6620530-6620817:1:exon
so has part: feature:6648929-6649084:1:exon
so has part: feature:6652260-6652381:1:exon
so has part: feature:6656927-6657159:1:exon
so has part: feature:6659087-6659217:1:exon
so has part: feature:6664327-6664428:1:exon
so has part: feature:6664982-6665148:1:exon
so has part: feature:6669494-6669624:1:exon
so has part: feature:6672853-6673013:1:exon

XP_019777071.1
type: Protein
SIO_000068: ncbiprotein

position:6620530:1
position: 6620530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6673013:1
position: 6673013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6620530-6620817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6648929-6649084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6652260-6652381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6656927-6657159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6659087-6659217:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6664327-6664428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6664982-6665148:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6669494-6669624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6672853-6673013:1:exon

ANGPT2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ANGPT2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiopoietin-2 isoform X2
translation: MWQLVFFTLSCDLLLAAAYSNFRKSMDSIGKRQYQVQHGSCSYTFLLPEMDNCRSPSSAYVPNAVQRDAPLDYDDSVQRLQLLENIMENNTQWLMKLENYIQDNMKKEMVEIQQNAVQNQTAVMIEIGTNLLNQTAEQTRKLTDVEAQVLNQTTRLELQLLEHSLSTNKLEKQILDQTSEINKLQDKNSFLEKKVLDMEDKHIVQLRSIKEEKDQLQVLVSKQNSIIEELEKQLVTATVNNSVLQKQQHDLMETVHNLLTMISTSNSKHSLIAKEEQIIFRDCAEAFKSGLTTSGIYTLTFPNSTEEIKAYCDMETAGGGWTIIQRREDGSVDFQRTWKEYKVGFGNPSGEHWLGNEFVSQVTNQKRYVLKIHLKDWEGNEAYSLYDHFYLSSEELNYRIHLKGLTGTAGKISSISQPGNDFSTKDADNDKCICKCSQMLTGGWWFDACGPSNLNGMYYPQRQNTNKFNGIKWYYWKGSGYSLKATTMMIRPADF
SIO_010081: ANGPT2
subclass of: SO_0000673
so part of: ANGPT2
location: join(6620530..6620817,6648929..6649084,6652260..6652381,6656927..6657159,6659090..6659217,6664327..6664428,6664982..6665148,6669494..6669624,6672853..6673013)
location: region:6620530-6673013:1
so has part: feature:6620530-6620817:1:exon
so has part: feature:6648929-6649084:1:exon
so has part: feature:6652260-6652381:1:exon
so has part: feature:6656927-6657159:1:exon
so has part: feature:6659090-6659217:1:exon
so has part: feature:6664327-6664428:1:exon
so has part: feature:6664982-6665148:1:exon
so has part: feature:6669494-6669624:1:exon
so has part: feature:6672853-6673013:1:exon

XP_004315587.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6620530-6620817:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6648929-6649084:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6652260-6652381:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6656927-6657159:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6659090-6659217:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6664327-6664428:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6664982-6665148:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6669494-6669624:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6672853-6673013:1:exon

MCPH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: MCPH1
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: microcephalin
translation: MAAPETLGGPVLKDVVAYVEVWSASGTENYSKTFTNQLADMGAKVSKTFNKQVTHVVFKDGYQSTWAKAQKRGVKLVSVLWVEKCRTAGVHIDESLFPAANPNEHLPSLMKKKRKCMQPKDFMPKTPENDKRLQKKFEKMAKELQQQKTTVDNDVPVLLFESNGSLVYSPTVKICSGHHSAVEKRLQEMKEKRENLSPTSSQIVEKSDDNTVNALCEASLNLSHDTLCSEDSFAGVLRLSFDDLCGSSGCGTQQRRLGGFLDESKSAACASSAVLKTRSVRPPASPGPLGQLTLHQPPGSLSKGDTHRQRVAAGQVITPDVKPAREPAEGVFDEKRGLSATPSVTNEPAGGPSCPQSPSATRRRVSANSSPPPEERLSKRRCLGWPPAPRLQLENSPKCASSSAVETLGRGESSYDDYFSPDNLKERDSGSLLPGVQPPAGPALLHCMRSLSRRERTSLLERADFSCIGRSPRSAGGTDSTVKAGFRLQKPANYGADPGLSSVTSKETPAAEGTPGDCPRAEARGGGDARPGGSDSPHTLNGLTPQKGLRGDFTSLKGSNKEVRGWIDITSTQKGDTPSEMVNSPESEAQSDDKLNFVGDWDVEKSAEAMEELPRGCSESVKRGPARHDVLDGSWEXFKDLVRPHEEPRKREKGQKPTRTLVMTSMPSEKQNVVNQVVDKLKGFSLAGEACGCPTHVLARKPRRTQNVLRGIASGCWILSFEREKWSSCYL
SIO_010081: MCPH1
subclass of: SO_0000673
so part of: MCPH1
location: complement(join(6684592..6684618,6700063..6700225,6702655..6702692,6726607..6726715,6741535..6742704,6744169..6744258,6747845..6747988,6749392..6749506,6752514..6752601,6771192..6771310,6774515..6774606,6775643..6775682))
location: region:6684592-6775682:-1
so has part: feature:6775643-6775682:-1:exon
so has part: feature:6774515-6774606:-1:exon
so has part: feature:6771192-6771310:-1:exon
so has part: feature:6752514-6752601:-1:exon
so has part: feature:6749392-6749506:-1:exon
so has part: feature:6747845-6747988:-1:exon
so has part: feature:6744169-6744258:-1:exon
so has part: feature:6741535-6742704:-1:exon
so has part: feature:6726607-6726715:-1:exon
so has part: feature:6702655-6702692:-1:exon
so has part: feature:6700063-6700225:-1:exon
so has part: feature:6684592-6684618:-1:exon

XP_033704637.1
type: Protein
SIO_000068: ncbiprotein

position:6684592:-1
position: 6684592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6775682:-1
position: 6775682
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6775643-6775682:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6774515-6774606:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6771192-6771310:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6752514-6752601:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6749392-6749506:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6747845-6747988:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6744169-6744258:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6741535-6742704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6726607-6726715:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6702655-6702692:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6700063-6700225:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6684592-6684618:-1:exon

LOC101332815
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101332815
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7322229..7322676)
location: region:7322229-7322676:-1
so has part: feature:7322229-7322676:-1:exon

101332815
type: Gene
SIO_000068: ncbigene

position:7322229:-1
position: 7322229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7322676:-1
position: 7322676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7322229-7322676:-1:exon

LOC101332815
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC101332815
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101332815
subclass of: SO_0000673
so part of: LOC101332815
location: complement(7322229..7322676)
location: region:7322229-7322676:-1
so has part: feature:7322229-7322676:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7322229-7322676:-1:exon

LOC117310067
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310067
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 7797204..7797325
location: region:7797204-7797325:1
so has part: feature:7797204-7797325:1:exon

117310067
type: Gene
SIO_000068: ncbigene

position:7797204:1
position: 7797204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7797325:1
position: 7797325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7797204-7797325:1:exon

LOC117310067
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC117310067
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117310067
subclass of: SO_0000673
so part of: LOC117310067
location: 7797204..7797325
location: region:7797204-7797325:1
so has part: feature:7797204-7797325:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7797204-7797325:1:exon

LOC101327087
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101327087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(7922400..7926574)
location: region:7922400-7926574:-1
so has part: feature:7922400-7926574:-1:exon

101327087
type: Gene
SIO_000068: ncbigene

position:7922400:-1
position: 7922400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7926574:-1
position: 7926574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7922400-7926574:-1:exon

LOC101327087
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC101327087
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101327087
subclass of: SO_0000673
so part of: LOC101327087
location: complement(7922400..7922857)
location: region:7922400-7922857:-1
so has part: feature:7922400-7922857:-1:exon

position:7922857:-1
position: 7922857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7922400-7922857:-1:exon

LOC101327087
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC101327087
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101327087
subclass of: SO_0000673
so part of: LOC101327087
location: complement(7925938..7926035)
location: region:7925938-7926035:-1
so has part: feature:7925938-7926035:-1:exon

position:7925938:-1
position: 7925938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7926035:-1
position: 7926035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7925938-7926035:-1:exon

LOC101327087
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC101327087
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 52% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC101327087
subclass of: SO_0000673
so part of: LOC101327087
location: complement(7926552..7926574)
location: region:7926552-7926574:-1
so has part: feature:7926552-7926574:-1:exon

position:7926552:-1
position: 7926552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7926552-7926574:-1:exon

CSMD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: CSMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8113389..9665287
location: region:8113389-9665287:1
so has part: feature:8113389-9665287:1:exon
subclass of: SO_0000010

101339135
type: Gene
SIO_000068: ncbigene

position:8113389:1
position: 8113389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9665287:1
position: 9665287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8113389-9665287:1:exon

CSMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CSMD1
product: CUB and Sushi multiple domains 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033848938.1
SIO_010081: CSMD1
subclass of: SO_0000673
so part of: CSMD1
location: join(8113389..8113459,8253961..8254157,8254348..8254518,8262526..8262742,8453841..8453953,8793617..8793811,8818702..8818909,9057061..9057173,9094568..9094645,9173050..9173137,9193782..9193906,9204514..9204635,9265012..9265115,9286593..9286705,9340180..9340362,9341593..9341919,9342900..9343094,9346949..9347087,9350018..9350205,9357821..9358009,9370509..9370625,9372110..9372325,9377847..9378035,9387131..9387300,9391583..9391739,9416971..9417162,9417631..9417757,9431733..9431935,9452545..9452736,9458138..9458276,9465118..9465305,9471096..9471290,9475686..9475802,9479713..9479826,9481241..9481336,9486635..9486838,9487850..9487974,9488344..9488440,9495072..9495176,9510261..9510379,9514096..9514165,9516262..9516378,9522868..9523077,9539870..9540058,9548031..9548208,9550133..9550278,9551064..9551144,9552292..9552405,9558134..9558322,9560983..9561129,9566039..9566227,9584334..9584519,9601551..9601745,9607111..9607284,9621791..9621964,9623362..9623535,9630367..9630555,9633215..9633388,9634182..9634364,9640656..9640832,9641468..9641647,9643900..9644073,9644362..9644535,9646220..9646293,9647361..9647472,9649642..9649821,9651090..9651134,9654002..9654163,9657744..9657856,9658637..9658724,9664902..9665034,9665128..9665287)
location: region:8113389-9665287:1
so has part: feature:8113389-8113459:1:exon
so has part: feature:8253961-8254157:1:exon
so has part: feature:8254348-8254518:1:exon
so has part: feature:8262526-8262742:1:exon
so has part: feature:8453841-8453953:1:exon
so has part: feature:8793617-8793811:1:exon
so has part: feature:8818702-8818909:1:exon
so has part: feature:9057061-9057173:1:exon
so has part: feature:9094568-9094645:1:exon
so has part: feature:9173050-9173137:1:exon
so has part: feature:9193782-9193906:1:exon
so has part: feature:9204514-9204635:1:exon
so has part: feature:9265012-9265115:1:exon
so has part: feature:9286593-9286705:1:exon
so has part: feature:9340180-9340362:1:exon
so has part: feature:9341593-9341919:1:exon
so has part: feature:9342900-9343094:1:exon
so has part: feature:9346949-9347087:1:exon
so has part: feature:9350018-9350205:1:exon
so has part: feature:9357821-9358009:1:exon
so has part: feature:9370509-9370625:1:exon
so has part: feature:9372110-9372325:1:exon
so has part: feature:9377847-9378035:1:exon
so has part: feature:9387131-9387300:1:exon
so has part: feature:9391583-9391739:1:exon
so has part: feature:9416971-9417162:1:exon
so has part: feature:9417631-9417757:1:exon
so has part: feature:9431733-9431935:1:exon
so has part: feature:9452545-9452736:1:exon
so has part: feature:9458138-9458276:1:exon
so has part: feature:9465118-9465305:1:exon
so has part: feature:9471096-9471290:1:exon
so has part: feature:9475686-9475802:1:exon
so has part: feature:9479713-9479826:1:exon
so has part: feature:9481241-9481336:1:exon
so has part: feature:9486635-9486838:1:exon
so has part: feature:9487850-9487974:1:exon
so has part: feature:9488344-9488440:1:exon
so has part: feature:9495072-9495176:1:exon
so has part: feature:9510261-9510379:1:exon
so has part: feature:9514096-9514165:1:exon
so has part: feature:9516262-9516378:1:exon
so has part: feature:9522868-9523077:1:exon
so has part: feature:9539870-9540058:1:exon
so has part: feature:9548031-9548208:1:exon
so has part: feature:9550133-9550278:1:exon
so has part: feature:9551064-9551144:1:exon
so has part: feature:9552292-9552405:1:exon
so has part: feature:9558134-9558322:1:exon
so has part: feature:9560983-9561129:1:exon
so has part: feature:9566039-9566227:1:exon
so has part: feature:9584334-9584519:1:exon
so has part: feature:9601551-9601745:1:exon
so has part: feature:9607111-9607284:1:exon
so has part: feature:9621791-9621964:1:exon
so has part: feature:9623362-9623535:1:exon
so has part: feature:9630367-9630555:1:exon
so has part: feature:9633215-9633388:1:exon
so has part: feature:9634182-9634364:1:exon
so has part: feature:9640656-9640832:1:exon
so has part: feature:9641468-9641647:1:exon
so has part: feature:9643900-9644073:1:exon
so has part: feature:9644362-9644535:1:exon
so has part: feature:9646220-9646293:1:exon
so has part: feature:9647361-9647472:1:exon
so has part: feature:9649642-9649821:1:exon
so has part: feature:9651090-9651134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8113389-8113459:1:exon

position:8113459:1
position: 8113459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8253961-8254157:1:exon

position:8253961:1
position: 8253961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8254157:1
position: 8254157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8254348-8254518:1:exon

position:8254348:1
position: 8254348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8254518:1
position: 8254518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8262526-8262742:1:exon

position:8262526:1
position: 8262526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8262742:1
position: 8262742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8453841-8453953:1:exon

position:8453841:1
position: 8453841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8453953:1
position: 8453953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8793617-8793811:1:exon

position:8793617:1
position: 8793617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8793811:1
position: 8793811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8818702-8818909:1:exon

position:8818702:1
position: 8818702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8818909:1
position: 8818909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:9057061-9057173:1:exon

position:9057061:1
position: 9057061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9057173:1
position: 9057173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:9094568-9094645:1:exon

position:9094568:1
position: 9094568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9094645:1
position: 9094645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:9173050-9173137:1:exon

position:9173050:1
position: 9173050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9173137:1
position: 9173137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:9193782-9193906:1:exon

position:9193782:1
position: 9193782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9193906:1
position: 9193906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:9204514-9204635:1:exon

position:9204514:1
position: 9204514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9204635:1
position: 9204635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:9265012-9265115:1:exon

position:9265012:1
position: 9265012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9265115:1
position: 9265115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:9286593-9286705:1:exon

position:9286593:1
position: 9286593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9286705:1
position: 9286705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:9340180-9340362:1:exon

position:9340180:1
position: 9340180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9340362:1
position: 9340362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:9341593-9341919:1:exon

position:9341593:1
position: 9341593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9341919:1
position: 9341919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:9342900-9343094:1:exon

position:9342900:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9343094:1
position: 9343094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:9346949-9347087:1:exon

position:9346949:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9347087:1
position: 9347087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:9350018-9350205:1:exon

position:9350018:1
position: 9350018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9350205:1
position: 9350205
reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:9357821-9358009:1:exon

position:9357821:1
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reference: sequence
type: ForwardStrandPosition
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position:9358009:1
position: 9358009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:9370509-9370625:1:exon

position:9370509:1
position: 9370509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9370625:1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:9372110-9372325:1:exon

position:9372110:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9372325:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 23
SIO_000628: feature:9377847-9378035:1:exon

position:9377847:1
position: 9377847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9378035:1
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:9387131-9387300:1:exon

position:9387131:1
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reference: sequence
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position:9387300:1
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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:9391583-9391739:1:exon

position:9391583:1
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reference: sequence
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position:9391739:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:9416971-9417162:1:exon

position:9416971:1
position: 9416971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9417162:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:9417631-9417757:1:exon

position:9417631:1
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reference: sequence
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position:9417757:1
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:9431733-9431935:1:exon

position:9431733:1
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reference: sequence
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position:9431935:1
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urn:…
SIO_000300: 29
SIO_000628: feature:9452545-9452736:1:exon

position:9452545:1
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reference: sequence
type: ForwardStrandPosition
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position:9452736:1
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urn:…
SIO_000300: 30
SIO_000628: feature:9458138-9458276:1:exon

position:9458138:1
position: 9458138
reference: sequence
type: ForwardStrandPosition
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position:9458276:1
position: 9458276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:9465118-9465305:1:exon

position:9465118:1
position: 9465118
reference: sequence
type: ForwardStrandPosition
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position:9465305:1
position: 9465305
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 32
SIO_000628: feature:9471096-9471290:1:exon

position:9471096:1
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reference: sequence
type: ForwardStrandPosition
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position:9471290:1
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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:9475686-9475802:1:exon

position:9475686:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9475802:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 34
SIO_000628: feature:9479713-9479826:1:exon

position:9479713:1
position: 9479713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9479826:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:9481241-9481336:1:exon

position:9481241:1
position: 9481241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9481336:1
position: 9481336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:9486635-9486838:1:exon

position:9486635:1
position: 9486635
reference: sequence
type: ForwardStrandPosition
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position:9486838:1
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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:9487850-9487974:1:exon

position:9487850:1
position: 9487850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9487974:1
position: 9487974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:9488344-9488440:1:exon

position:9488344:1
position: 9488344
reference: sequence
type: ForwardStrandPosition
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position:9488440:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 39
SIO_000628: feature:9495072-9495176:1:exon

position:9495072:1
position: 9495072
reference: sequence
type: ForwardStrandPosition
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position:9495176:1
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reference: sequence
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urn:…
SIO_000300: 40
SIO_000628: feature:9510261-9510379:1:exon

position:9510261:1
position: 9510261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9510379:1
position: 9510379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:9514096-9514165:1:exon

position:9514096:1
position: 9514096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9514165:1
position: 9514165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:9516262-9516378:1:exon

position:9516262:1
position: 9516262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9516378:1
position: 9516378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:9522868-9523077:1:exon

position:9522868:1
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reference: sequence
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position:9523077:1
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type: ForwardStrandPosition
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urn:…
SIO_000300: 44
SIO_000628: feature:9539870-9540058:1:exon

position:9539870:1
position: 9539870
reference: sequence
type: ForwardStrandPosition
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position:9540058:1
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reference: sequence
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urn:…
SIO_000300: 45
SIO_000628: feature:9548031-9548208:1:exon

position:9548031:1
position: 9548031
reference: sequence
type: ForwardStrandPosition
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position:9548208:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:9550133-9550278:1:exon

position:9550133:1
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reference: sequence
type: ForwardStrandPosition
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position:9550278:1
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reference: sequence
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urn:…
SIO_000300: 47
SIO_000628: feature:9551064-9551144:1:exon

position:9551064:1
position: 9551064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9551144:1
position: 9551144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:9552292-9552405:1:exon

position:9552292:1
position: 9552292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9552405:1
position: 9552405
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 49
SIO_000628: feature:9558134-9558322:1:exon

position:9558134:1
position: 9558134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9558322:1
position: 9558322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:9560983-9561129:1:exon

position:9560983:1
position: 9560983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9561129:1
position: 9561129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:9566039-9566227:1:exon

position:9566039:1
position: 9566039
reference: sequence
type: ForwardStrandPosition
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position:9566227:1
position: 9566227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:9584334-9584519:1:exon

position:9584334:1
position: 9584334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9584519:1
position: 9584519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:9601551-9601745:1:exon

position:9601551:1
position: 9601551
reference: sequence
type: ForwardStrandPosition
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position:9601745:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 54
SIO_000628: feature:9607111-9607284:1:exon

position:9607111:1
position: 9607111
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9607284:1
position: 9607284
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 55
SIO_000628: feature:9621791-9621964:1:exon

position:9621791:1
position: 9621791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9621964:1
position: 9621964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:9623362-9623535:1:exon

position:9623362:1
position: 9623362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9623535:1
position: 9623535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:9630367-9630555:1:exon

position:9630367:1
position: 9630367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9630555:1
position: 9630555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:9633215-9633388:1:exon

position:9633215:1
position: 9633215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9633388:1
position: 9633388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:9634182-9634364:1:exon

position:9634182:1
position: 9634182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9634364:1
position: 9634364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:9640656-9640832:1:exon

position:9640656:1
position: 9640656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9640832:1
position: 9640832
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 61
SIO_000628: feature:9641468-9641647:1:exon

position:9641468:1
position: 9641468
reference: sequence
type: ForwardStrandPosition
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position:9641647:1
position: 9641647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:9643900-9644073:1:exon

position:9643900:1
position: 9643900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9644073:1
position: 9644073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:9644362-9644535:1:exon

position:9644362:1
position: 9644362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9644535:1
position: 9644535
reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 64
SIO_000628: feature:9646220-9646293:1:exon

position:9646220:1
position: 9646220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9646293:1
position: 9646293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:9647361-9647472:1:exon

position:9647361:1
position: 9647361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9647472:1
position: 9647472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:9649642-9649821:1:exon

position:9649642:1
position: 9649642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9649821:1
position: 9649821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:9651090-9651134:1:exon

position:9651090:1
position: 9651090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9651134:1
position: 9651134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 68
SIO_000628: feature:9654002-9654163:1:exon

position:9654002:1
position: 9654002
reference: sequence
type: ForwardStrandPosition
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position:9654163:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 69
SIO_000628: feature:9657744-9657856:1:exon

position:9657744:1
position: 9657744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9657856:1
position: 9657856
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 70
SIO_000628: feature:9658637-9658724:1:exon

position:9658637:1
position: 9658637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9658724:1
position: 9658724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:9664902-9665034:1:exon

position:9664902:1
position: 9664902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9665034:1
position: 9665034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:9665128-9665287:1:exon

position:9665128:1
position: 9665128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: CSMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CUB and sushi domain-containing protein 1
translation: MLMVGRQEWMMEVGGDSGQEGAGWPRKGTLRPDPSTIHPFPNNADPEIANDTVGDEDARKLSFCAQVPGRISRDRVLGEVGVESFTTLPVLPQVVSGLLRSYSNPPFGTQGRLGVLPTRNGGTKGPPRLGVPQAPLGFMNAEQSLMRQNCGGLVQGPNGTIESPGFPHGYPNYANCTWIIITGERNRIQLSFHTFALEEDFDILSVYDGQLQQGNLKVRLSGFQLPSCIVSTGSILTLWFMTDFAVSAQGFKALYEVLPSHTCGNPGEILKGVLHGTRFNIGDKIRYSCLSGYILEGHAILTCIVSPGNGASWDFPAPFCRAEGACGGTLRGTSGSISSPYFPSEYENNADCTWTILAEPGDTIALVFTDFQLEEGYDFLEISGTEAPSIWLTGMNLPSPVISSKNWLRLHFTSDSNHRRKGFNAQFQVKKAIELKSRGVKMLPSKDSSHKNSVLTQGGVALVSDMCPDPGIPENGRRTGSDFRVGANVQFSCEDNYVLQGSKSITCQRVTETLAAWSDHRPICRARTCGSNLRGPSGVITSPNYPVQYEDNAHCVWVITTTDPDKVIKLAFEEFELERGYDTLTVGDAGKVGDTRTVLYVLTGSSVPDLIVSMSNQMWLHLQSDDSIASPGFKAVYQEIEKGGCGDPGIPAYGKRTGSSFLHGDSLTFECQAAFELVGERVITCQQNNQWSGNKPSCVFSCFFNFTASSGIILSPNYPEEYGNNMNCVWLIISEPGSRIHLIFNDFDVEPQFDFLAVKDDGISDITVLGTFSGNEVPSQLASSGHVVRLEFQSDHSTTGRGFNITYTTFGQNECHDPGIPINGRRFGDRFLLGSSVSFHCDDGFVKTQGSESITCILQDGNVVWSSTVPRCEAPCGGHLTASSGVILPPGWPGYYKDSLNCEWIIEAKPGHSIKITFDRFQTEVNYDTLEVRDGPASSSPLIGEYHGTQAPQFLISTGNFMYLLFTTDNSRSSVGFLIRYESVTLESDSCLDPGIPVNGHRHGSHFGIQSTVTFSCNPGYTLSDDEPLVCERNHQWSHALPSCDALCGGYIHGKSGTVLSPGFPDFYPNSLNCTWTIEVSHGKGVQMIFHTFHLESSHDYLLITEDGSFSEPVARLTGSVLPHTIKAGLFGNFTAQLRFISDFSISYEGFNITFSEYDLEPCDDPGVPAFSRRIGFHFGVGDSLTFSCFPGYRLEGATKLTCLGGGRRVWSASLPRCVAECGASVKGNEGTLLSPNFPSNYDNNHECIYKIETEAGKGIHLRARSFQLFEGDILKVYDGRDSSSRPLGAFTKNELTGLILNSTSNHLWLEFNSNGSDTDQGFQLTYTSFDLVKCEDPGIPNYGYRIRDEGHFTDTVVLYSCNPGYAMHGGNTLTCLSGDRRVWDRPLPSCVAECGGQIHAATSGRILSPGYPAPYDNNLHCTWVVEADPGKTISLHFIVFDTELAHDILKVWDGPVDSAILLKEWSGSALPEDIHSTFNSLTLQFDSDFFISKSGFSIQFSTSIASTCNDPGIPQNGTRYGDSREPGDTITFQCDPGYQLQGQAKITCVQLNNRFFWQPDPPTCIAACGGNLTGPAGVILSPNYPQPYPPGKECDWRIKVNPDFVIALIFKSFNMEPSYDFLHIYEGEDSNSPLIGSFQGSQAPERIESSGNSLFLAFRSDASVGLSGFAIEFKEKPREACFDPGNIMNGTRIGTDFKLGSTVTYQCDSGYKIADPSSITCVIGADGKPAWNRVLPSCNAPCGGQYTGSEGVVLSPNYPHNYTAGQICLYSITVPKEFVVFGQFAYFQTALNDLTELFDGTHPQARLLSSLSGSHSGETLPLATSNQILLRFSAKSGAPARGFHFVYQAVPRTSDTQCSSVPEPRYGRRIGLEFSAGSIVRFECNPGYLLQGSMAIRCQSVPNALAQWNDTIPSCVVPCSGNFTQRRGTILSPGYPEPYGNNLNCIWKIIVTEGSGIQIQVISFATEQNWDSLEIYDGGDVAAPRLGSFSGTTVPALLN…
SIO_010081: CSMD1
subclass of: SO_0000673
so part of: CSMD1
location: join(8113389..8113459,8253961..8254157,8254348..8254518,8262526..8262742,8453841..8453953,8793617..8793811,8818702..8818909,9057061..9057173,9094568..9094645,9173050..9173137,9193782..9193906,9204514..9204635,9265012..9265115,9286593..9286705,9340180..9340362,9341593..9341919,9342900..9343094,9346949..9347087,9350018..9350205,9357821..9358009,9370509..9370625,9372110..9372325,9377847..9378035,9387131..9387300,9391583..9391739,9416971..9417162,9417631..9417757,9431733..9431935,9452545..9452736,9458138..9458276,9465118..9465305,9471096..9471290,9475686..9475802,9479713..9479826,9481241..9481336,9486635..9486838,9487850..9487974,9488344..9488440,9495072..9495176,9510261..9510379,9514096..9514165,9516262..9516378,9522868..9523077,9539870..9540058,9548031..9548208,9550133..9550278,9551064..9551144,9552292..9552405,9558134..9558322,9560983..9561129,9566039..9566227,9584334..9584519,9601551..9601745,9607111..9607284,9621791..9621964,9623362..9623535,9630367..9630555,9633215..9633388,9634182..9634364,9640656..9640832,9641468..9641647,9643900..9644073,9644362..9644535,9646220..9646293,9647361..9647472,9649642..9649821,9651090..9651134,9654002..9654163,9657744..9657856,9658637..9658724,9664902..9665034,9665128..9665287)
location: region:8113389-9665287:1
so has part: feature:8113389-8113459:1:exon
so has part: feature:8253961-8254157:1:exon
so has part: feature:8254348-8254518:1:exon
so has part: feature:8262526-8262742:1:exon
so has part: feature:8453841-8453953:1:exon
so has part: feature:8793617-8793811:1:exon
so has part: feature:8818702-8818909:1:exon
so has part: feature:9057061-9057173:1:exon
so has part: feature:9094568-9094645:1:exon
so has part: feature:9173050-9173137:1:exon
so has part: feature:9193782-9193906:1:exon
so has part: feature:9204514-9204635:1:exon
so has part: feature:9265012-9265115:1:exon
so has part: feature:9286593-9286705:1:exon
so has part: feature:9340180-9340362:1:exon
so has part: feature:9341593-9341919:1:exon
so has part: feature:9342900-9343094:1:exon
so has part: feature:9346949-9347087:1:exon
so has part: feature:9350018-9350205:1:exon
so has part: feature:9357821-9358009:1:exon
so has part: feature:9370509-9370625:1:exon
so has part: feature:9372110-9372325:1:exon
so has part: feature:9377847-9378035:1:exon
so has part: feature:9387131-9387300:1:exon
so has part: feature:9391583-9391739:1:exon
so has part: feature:9416971-9417162:1:exon
so has part: feature:9417631-9417757:1:exon
so has part: feature:9431733-9431935:1:exon
so has part: feature:9452545-9452736:1:exon
so has part: feature:9458138-9458276:1:exon
so has part: feature:9465118-9465305:1:exon
so has part: feature:9471096-9471290:1:exon
so has part: feature:9475686-9475802:1:exon
so has part: feature:9479713-9479826:1:exon
so has part: feature:9481241-9481336:1:exon
so has part: feature:9486635-9486838:1:exon
so has part: feature:9487850-9487974:1:exon
so has part: feature:9488344-9488440:1:exon
so has part: feature:9495072-9495176:1:exon
so has part: feature:9510261-9510379:1:exon
so has part: feature:9514096-9514165:1:exon
so has part: feature:9516262-9516378:1:exon
so has part: feature:9522868-9523077:1:exon
so has part: feature:9539870-9540058:1:exon
so has part: feature:9548031-9548208:1:exon
so has part: feature:9550133-9550278:1:exon
so has part: feature:9551064-9551144:1:exon
so has part: feature:9552292-9552405:1:exon
so has part: feature:9558134-9558322:1:exon
so has part: feature:9560983-9561129:1:exon
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so has part: feature:9607111-9607284:1:exon
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so has part: feature:9633215-9633388:1:exon
so has part: feature:9634182-9634364:1:exon
so has part: feature:9640656-9640832:1:exon
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so has part: feature:9643900-9644073:1:exon
so has part: feature:9644362-9644535:1:exon
so has part: feature:9646220-9646293:1:exon
so has part: feature:9647361-9647472:1:exon
so has part: feature:9649642-9649821:1:exon

XP_033704829.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8113389-8113459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8253961-8254157:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8254348-8254518:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8262526-8262742:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8453841-8453953:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8793617-8793811:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8818702-8818909:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:9057061-9057173:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:9094568-9094645:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:9173050-9173137:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:9193782-9193906:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:9204514-9204635:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:9265012-9265115:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:9286593-9286705:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:9340180-9340362:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:9341593-9341919:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:9342900-9343094:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:9346949-9347087:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:9350018-9350205:1:exon

urn:…
SIO_000300: 20
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urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
SIO_000628: feature:9372110-9372325:1:exon

urn:…
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SIO_000628: feature:9377847-9378035:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:9387131-9387300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:9391583-9391739:1:exon

urn:…
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SIO_000628: feature:9416971-9417162:1:exon

urn:…
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SIO_000628: feature:9417631-9417757:1:exon

urn:…
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SIO_000628: feature:9431733-9431935:1:exon

urn:…
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SIO_000628: feature:9452545-9452736:1:exon

urn:…
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SIO_000628: feature:9458138-9458276:1:exon

urn:…
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SIO_000628: feature:9465118-9465305:1:exon

urn:…
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urn:…
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SIO_000628: feature:9475686-9475802:1:exon

urn:…
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SIO_000628: feature:9479713-9479826:1:exon

urn:…
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SIO_000628: feature:9481241-9481336:1:exon

urn:…
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SIO_000628: feature:9486635-9486838:1:exon

urn:…
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SIO_000628: feature:9487850-9487974:1:exon

urn:…
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SIO_000628: feature:9488344-9488440:1:exon

urn:…
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SIO_000628: feature:9495072-9495176:1:exon

urn:…
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SIO_000628: feature:9510261-9510379:1:exon

urn:…
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urn:…
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SIO_000628: feature:9516262-9516378:1:exon

urn:…
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SIO_000628: feature:9522868-9523077:1:exon

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urn:…
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urn:…
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SIO_000628: feature:9550133-9550278:1:exon

urn:…
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SIO_000628: feature:9551064-9551144:1:exon

urn:…
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SIO_000628: feature:9552292-9552405:1:exon

urn:…
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SIO_000628: feature:9558134-9558322:1:exon

urn:…
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SIO_000628: feature:9584334-9584519:1:exon

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SIO_000628: feature:9607111-9607284:1:exon

urn:…
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SIO_000628: feature:9621791-9621964:1:exon

urn:…
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SIO_000628: feature:9630367-9630555:1:exon

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SIO_000628: feature:9633215-9633388:1:exon

urn:…
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SIO_000628: feature:9634182-9634364:1:exon

urn:…
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SIO_000628: feature:9640656-9640832:1:exon

urn:…
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SIO_000628: feature:9641468-9641647:1:exon

urn:…
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SIO_000628: feature:9643900-9644073:1:exon

urn:…
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SIO_000628: feature:9644362-9644535:1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:9646220-9646293:1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:9647361-9647472:1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:9649642-9649821:1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:9651090-9651134:1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:9654002-9654163:1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:9657744-9657856:1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:9658637-9658724:1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:9664902-9665034:1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:9665128-9665287:1:exon

LOC109547629
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC109547629
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 9914668..10223247
location: region:9914668-10223247:1
so has part: feature:9914668-10223247:1:exon
subclass of: SO_0000011

109547629
type: Gene
SIO_000068: ncbigene

position:9914668:1
position: 9914668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10223247:1
position: 10223247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9914668-10223247:1:exon

LOC109547629
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547629
product: uncharacterized LOC109547629
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_002173469.2
SIO_010081: LOC109547629
subclass of: SO_0000673
so part of: LOC109547629
location: join(9914668..9914791,9915589..9915645,10032577..10032643,10080053..10080222,10180207..10180314,10187744..10187828,10222682..10223247)
location: region:9914668-10223247:1
so has part: feature:9914668-9914791:1:exon
so has part: feature:9915589-9915645:1:exon
so has part: feature:10032577-10032643:1:exon
so has part: feature:10080053-10080222:1:exon
so has part: feature:10180207-10180314:1:exon
so has part: feature:10187744-10187828:1:exon
so has part: feature:10222682-10223247:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9914668-9914791:1:exon

position:9914791:1
position: 9914791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9915589-9915645:1:exon

position:9915589:1
position: 9915589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9915645:1
position: 9915645
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10032577-10032643:1:exon

position:10032577:1
position: 10032577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10032643:1
position: 10032643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10080053-10080222:1:exon

position:10080053:1
position: 10080053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10080222:1
position: 10080222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10180207-10180314:1:exon

position:10180207:1
position: 10180207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10180314:1
position: 10180314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10187744-10187828:1:exon

position:10187744:1
position: 10187744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10187828:1
position: 10187828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10222682-10223247:1:exon

position:10222682:1
position: 10222682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MYOM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: MYOM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10320628..10397026)
location: region:10320628-10397026:-1
so has part: feature:10320628-10397026:-1:exon
subclass of: SO_0000010

101339369
type: Gene
SIO_000068: ncbigene

position:10320628:-1
position: 10320628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10397026:-1
position: 10397026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10320628-10397026:-1:exon

MYOM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: MYOM2
product: myomesin 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_033848854.1
SIO_010081: MYOM2
subclass of: SO_0000673
so part of: MYOM2
location: complement(join(10320628..10321287,10322354..10322409,10323530..10323552,10324657..10324693,10325185..10325348,10329894..10329999,10334471..10334509,10335033..10335120,10335310..10335423,10341372..10341439,10342795..10342854,10342974..10343118,10347275..10347411,10347969..10348013,10350189..10350295,10350385..10350541,10351613..10351727,10353139..10353317,10354449..10354575,10356456..10356643,10358239..10358360,10359810..10359984,10360740..10360923,10364352..10364479,10373753..10373806,10374795..10374994,10376076..10376217,10378439..10378600,10381276..10381440,10382190..10382240,10382327..10382415,10388967..10389059,10390183..10390340,10390451..10390613,10394457..10394615,10395839..10397026))
location: region:10320628-10397026:-1
so has part: feature:10395839-10397026:-1:exon
so has part: feature:10394457-10394615:-1:exon
so has part: feature:10390451-10390613:-1:exon
so has part: feature:10390183-10390340:-1:exon
so has part: feature:10388967-10389059:-1:exon
so has part: feature:10382327-10382415:-1:exon
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so has part: feature:10358239-10358360:-1:exon
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so has part: feature:10354449-10354575:-1:exon
so has part: feature:10353139-10353317:-1:exon
so has part: feature:10351613-10351727:-1:exon
so has part: feature:10350385-10350541:-1:exon
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so has part: feature:10347969-10348013:-1:exon
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so has part: feature:10341372-10341439:-1:exon
so has part: feature:10335310-10335423:-1:exon
so has part: feature:10335033-10335120:-1:exon
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so has part: feature:10329894-10329999:-1:exon
so has part: feature:10325185-10325348:-1:exon
so has part: feature:10324657-10324693:-1:exon
so has part: feature:10323530-10323552:-1:exon
so has part: feature:10322354-10322409:-1:exon
so has part: feature:10320628-10321287:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10395839-10397026:-1:exon

position:10395839:-1
position: 10395839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10394457-10394615:-1:exon

position:10394457:-1
position: 10394457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10394615:-1
position: 10394615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10390451-10390613:-1:exon

position:10390451:-1
position: 10390451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10390613:-1
position: 10390613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10390183-10390340:-1:exon

position:10390183:-1
position: 10390183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10390340:-1
position: 10390340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10388967-10389059:-1:exon

position:10388967:-1
position: 10388967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10389059:-1
position: 10389059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10382327-10382415:-1:exon

position:10382327:-1
position: 10382327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10382415:-1
position: 10382415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10382190-10382240:-1:exon

position:10382190:-1
position: 10382190
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10382240:-1
position: 10382240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10381276-10381440:-1:exon

position:10381276:-1
position: 10381276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10381440:-1
position: 10381440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10378439-10378600:-1:exon

position:10378439:-1
position: 10378439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10378600:-1
position: 10378600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10376076-10376217:-1:exon

position:10376076:-1
position: 10376076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10376217:-1
position: 10376217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10374795-10374994:-1:exon

position:10374795:-1
position: 10374795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10374994:-1
position: 10374994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10373753-10373806:-1:exon

position:10373753:-1
position: 10373753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10373806:-1
position: 10373806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10364352-10364479:-1:exon

position:10364352:-1
position: 10364352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10364479:-1
position: 10364479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10360740-10360923:-1:exon

position:10360740:-1
position: 10360740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10360923:-1
position: 10360923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10359810-10359984:-1:exon

position:10359810:-1
position: 10359810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10359984:-1
position: 10359984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10358239-10358360:-1:exon

position:10358239:-1
position: 10358239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10358360:-1
position: 10358360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:10356456-10356643:-1:exon

position:10356456:-1
position: 10356456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10356643:-1
position: 10356643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:10354449-10354575:-1:exon

position:10354449:-1
position: 10354449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10354575:-1
position: 10354575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:10353139-10353317:-1:exon

position:10353139:-1
position: 10353139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10353317:-1
position: 10353317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:10351613-10351727:-1:exon

position:10351613:-1
position: 10351613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10351727:-1
position: 10351727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:10350385-10350541:-1:exon

position:10350385:-1
position: 10350385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10350541:-1
position: 10350541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:10350189-10350295:-1:exon

position:10350189:-1
position: 10350189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10350295:-1
position: 10350295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:10347969-10348013:-1:exon

position:10347969:-1
position: 10347969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10348013:-1
position: 10348013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:10347275-10347411:-1:exon

position:10347275:-1
position: 10347275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10347411:-1
position: 10347411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:10342974-10343118:-1:exon

position:10342974:-1
position: 10342974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10343118:-1
position: 10343118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:10342795-10342854:-1:exon

position:10342795:-1
position: 10342795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10342854:-1
position: 10342854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:10341372-10341439:-1:exon

position:10341372:-1
position: 10341372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10341439:-1
position: 10341439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:10335310-10335423:-1:exon

position:10335310:-1
position: 10335310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10335423:-1
position: 10335423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:10335033-10335120:-1:exon

position:10335033:-1
position: 10335033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10335120:-1
position: 10335120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:10334471-10334509:-1:exon

position:10334471:-1
position: 10334471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10334509:-1
position: 10334509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:10329894-10329999:-1:exon

position:10329894:-1
position: 10329894
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10329999:-1
position: 10329999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:10325185-10325348:-1:exon

position:10325185:-1
position: 10325185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10325348:-1
position: 10325348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:10324657-10324693:-1:exon

position:10324657:-1
position: 10324657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10324693:-1
position: 10324693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:10323530-10323552:-1:exon

position:10323530:-1
position: 10323530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10323552:-1
position: 10323552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:10322354-10322409:-1:exon

position:10322354:-1
position: 10322354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10322409:-1
position: 10322409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:10320628-10321287:-1:exon

position:10321287:-1
position: 10321287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MYOM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: MYOM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: myomesin-2
translation: MSLVAVPFYQKRHKHFDQSYRNIQTRYLVDEYAAKKRASTQTSSQKSVTQESSSQRESSQTAPGGTTCRLCARRVSSALEEDEQERKHRYQSLVASYGEAKRQRFLSELAQLEEDVHLARTHARDKLDRYALQHVDRYALQHAVDDSLAWERHLREERLNRAPEILVQLRSHTIWERMSVKLCFTVQGFPTPVVQWYKDGSLICQAGEPGKYKIESKYGVHTLEINRVDFDDTATYSAVATNVHGQASTNAAVVVRRFRGDEEPLHSVGLPIRVPLPSVIPHMHFDVQFLEKFGVTFRREGETLALKCTLLVTPDLKRVQPRAEWYRDDVLLKESKWIKMFFGDGQALLSFSHLNKDDEGLYTLRIVSRGGVSDHSAYLFVRDADPLVTGAPGAPMDLQCHDVNRDYVIVTWKPPNTTKESPVIGYFVDRCEVGTDSWVQCNDRPVKICKYPVTGLFEGRSYIFRVRAVNNAGISRPSRVSEAVAALDPLDLKPLQAVHWEGDKEIVIYQEDLEGDVQVPGPPTNVHASEISRTYVVLSWDPPAPRGKEPLMYFIEKSVVGSGSWQRVNAQTAVRSPRYAVFDLAEGKPYVFRVLSANKHGLSDPSEITAPIQAQDTIVVPSAPGRVVTSRNTRTSVVVQWDQPKHEEDLLGYYVDCCVAGSTVWEPCNHKPVGYNRFVVHGLTTGEQYIFRVKAVNAVGTSENSQESDVIKVQAALTVPSHPYGITLLNCDGHSMTLGWKVPKFSGGSPILGYYIDKREAHHKNWHEVNASPLQERILTVEGLAEGSLYEFRIAATNLVGIGQPSDPSELFKCEAWTAPEPGPAYDLTFCEVRDTSLVLLWKAPVYSGSSPISGYFVDLKEEDSEEWITVNEATTAHRYLKVCDLHQGKTYIFRVRAVNASGVGKPSDTSEPVLVEARPGTKEISAGVDEKGDIYLSFDCQEMTDASHFTWCKSYEDIAGDERFKVETVGDHSKLYFKNLDKVDLGTYSVSVSDTDGVSSSFVLDEKEMERLVTLSNEIKHPTIPLKSELAYEIFDKGQVRFWLQAEHLSPDASYRFIINDREVSDSETHRIKCDKSTGLIEMVMDQFTIENEGTYTVQIHDGKAKSQSSLVLIGDAFKAVLEEAEFQRKEFLRKQGPHFAEFLHWDVTEDCEVRLVCKVANTKKETVFKWLKDDALYEPEKLPDLEKGVCELFLPKLSKKDHGEYKATLKDERGQDVSVLEIAGKVYEDMILAMSRVCGASASPLKILCTAEEIRLQCFMKYFTEEMKVNWYHKDAKIASGEHMRVGGSEEMAWLKICEPTEKDKGKYTFEIFDGQDTHQRSLDLSGQAFDEAFAEFQQLKAAAFAEKNRGKVLGGLPDVVTIMEGKTLNLTCTVFGNPDPEVMWFKNDRDIELSDHFLVKVEQAKYVSMTIKGVTSEDSGKYSIHVKNKYGGEKIDVTVSVYKHGEKIPDVVLPQQAKPKLLPASASSPTQ
SIO_010081: MYOM2
subclass of: SO_0000673
so part of: MYOM2
location: complement(join(10320970..10321287,10322354..10322409,10323530..10323552,10324657..10324693,10325185..10325348,10329894..10329999,10334471..10334509,10335033..10335120,10335310..10335423,10341372..10341439,10342795..10342854,10342974..10343118,10347275..10347411,10347969..10348013,10350189..10350295,10350385..10350541,10351613..10351727,10353139..10353317,10354449..10354575,10356456..10356643,10358239..10358360,10359810..10359984,10360740..10360923,10364352..10364479,10373753..10373806,10374795..10374994,10376076..10376217,10378439..10378600,10381276..10381440,10382190..10382240,10382327..10382415,10388967..10389059,10390183..10390340,10390451..10390613,10394457..10394615,10395839..10395945))
location: region:10320970-10395945:-1
so has part: feature:10395839-10395945:-1:exon
so has part: feature:10394457-10394615:-1:exon
so has part: feature:10390451-10390613:-1:exon
so has part: feature:10390183-10390340:-1:exon
so has part: feature:10388967-10389059:-1:exon
so has part: feature:10382327-10382415:-1:exon
so has part: feature:10382190-10382240:-1:exon
so has part: feature:10381276-10381440:-1:exon
so has part: feature:10378439-10378600:-1:exon
so has part: feature:10376076-10376217:-1:exon
so has part: feature:10374795-10374994:-1:exon
so has part: feature:10373753-10373806:-1:exon
so has part: feature:10364352-10364479:-1:exon
so has part: feature:10360740-10360923:-1:exon
so has part: feature:10359810-10359984:-1:exon
so has part: feature:10358239-10358360:-1:exon
so has part: feature:10356456-10356643:-1:exon
so has part: feature:10354449-10354575:-1:exon
so has part: feature:10353139-10353317:-1:exon
so has part: feature:10351613-10351727:-1:exon
so has part: feature:10350385-10350541:-1:exon
so has part: feature:10350189-10350295:-1:exon
so has part: feature:10347969-10348013:-1:exon
so has part: feature:10347275-10347411:-1:exon
so has part: feature:10342974-10343118:-1:exon
so has part: feature:10342795-10342854:-1:exon
so has part: feature:10341372-10341439:-1:exon
so has part: feature:10335310-10335423:-1:exon
so has part: feature:10335033-10335120:-1:exon
so has part: feature:10334471-10334509:-1:exon
so has part: feature:10329894-10329999:-1:exon
so has part: feature:10325185-10325348:-1:exon
so has part: feature:10324657-10324693:-1:exon
so has part: feature:10323530-10323552:-1:exon
so has part: feature:10322354-10322409:-1:exon
so has part: feature:10320970-10321287:-1:exon

XP_033704745.1
type: Protein
SIO_000068: ncbiprotein

position:10320970:-1
position: 10320970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10395945:-1
position: 10395945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10395839-10395945:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10394457-10394615:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10390451-10390613:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10390183-10390340:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10388967-10389059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10382327-10382415:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10382190-10382240:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10381276-10381440:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10378439-10378600:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10376076-10376217:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10374795-10374994:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10373753-10373806:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10364352-10364479:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10360740-10360923:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10359810-10359984:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10358239-10358360:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10356456-10356643:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10354449-10354575:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10353139-10353317:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10351613-10351727:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10350385-10350541:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10350189-10350295:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10347969-10348013:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10347275-10347411:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10342974-10343118:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10342795-10342854:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10341372-10341439:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10335310-10335423:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10335033-10335120:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:10334471-10334509:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:10329894-10329999:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:10325185-10325348:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:10324657-10324693:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:10323530-10323552:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:10322354-10322409:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:10320970-10321287:-1:exon

KBTBD11
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10433481..10459054)
location: region:10433481-10459054:-1
so has part: feature:10433481-10459054:-1:exon
subclass of: SO_0000010

101318495
type: Gene
SIO_000068: ncbigene

position:10433481:-1
position: 10433481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10459054:-1
position: 10459054
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10433481-10459054:-1:exon

KBTBD11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: KBTBD11
product: kelch repeat and BTB domain containing 11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_033848832.1
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: complement(join(10433481..10440229,10458942..10459054))
location: region:10433481-10459054:-1
so has part: feature:10458942-10459054:-1:exon
so has part: feature:10433481-10440229:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10458942-10459054:-1:exon

position:10458942:-1
position: 10458942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10433481-10440229:-1:exon

position:10440229:-1
position: 10440229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KBTBD11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: KBTBD11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch repeat and BTB domain-containing protein 11
translation: MESPVAPCVLYPGDGACGQAGGRGGAPEAPGEGGLQPPDAAGGEGAASPAQTPCSLSASLCFSSGDDSPPSCRRGRRVVQRQWEVGSAGAASPEGRASPEDPVSPEERTSPEESASPEDPASPGECPPAEEPTSPEEAGDPAPVPPGVGPEHGEPDLLIEVSGRRLRAHKAVLAARSDYFRARASRDVLRVQGVGWAALRLLLAYAYSGRMAGVRPDNVADVVAGARRLQLPCAAQRATDAVAPQLSLANCFEVLSAAKRQRLAELREAAYRFMSDHYLEVLREPAVFGRLSGAERDLLLRRRLRAGRARLLAAALGPAGERAGSRPQSPSGDAEGRGDAAVYCFHEAAGEWRELTRLPEGAPARGCGLCVLYNYLFVAGGVGPAGPDGRARPSDRVFCYNPATDRWSTVRPLRQARSQLQLLALDGHLYAVGGECLLSVERYDPRADRWAAVAPLPRGAFAVAHEATTCNGEIYVSGGSLFYRLLKYDPRRDEWQECPCSSSRERSADMVALDGFIYRFDLCGGRGDAPGAGPAGALSVLRYHCLAKQWSRCASHLRPPGAPSGLQPFRCAALDGAIYCVSRAGTWRFVPPPDGEPGAGDAGPEGSFELQSLRAPADARGLFFPFVLNLPEEKPDRGEEGAA
SIO_010081: KBTBD11
subclass of: SO_0000673
so part of: KBTBD11
location: complement(10437453..10439384)
location: region:10437453-10439384:-1
so has part: feature:10437453-10439384:-1:exon

XP_033704723.1
type: Protein
SIO_000068: ncbiprotein

position:10437453:-1
position: 10437453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10439384:-1
position: 10439384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10437453-10439384:-1:exon

ARHGEF10
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10472080..10559685)
location: region:10472080-10559685:-1
so has part: feature:10472080-10559685:-1:exon
subclass of: SO_0000010

101316211
type: Gene
SIO_000068: ncbigene

position:10472080:-1
position: 10472080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10559685:-1
position: 10559685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10472080-10559685:-1:exon

ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_019921580.2
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: complement(join(10472080..10473821,10476494..10476616,10483135..10483309,10490548..10490690,10492815..10492972,10493568..10493773,10495570..10495656,10496410..10496531,10497891..10497991,10498165..10498292,10498677..10498792,10507949..10508130,10509075..10509220,10510704..10510874,10513698..10513790,10515528..10515644,10517390..10517569,10517797..10517874,10521783..10521889,10524909..10525023,10527717..10527833,10530093..10530256,10532327..10532383,10534379..10534455,10537140..10537203,10538747..10539025,10539641..10539856,10544362..10544441,10559598..10559685))
location: region:10472080-10559685:-1
so has part: feature:10559598-10559685:-1:exon
so has part: feature:10544362-10544441:-1:exon
so has part: feature:10539641-10539856:-1:exon
so has part: feature:10538747-10539025:-1:exon
so has part: feature:10537140-10537203:-1:exon
so has part: feature:10534379-10534455:-1:exon
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urn:…
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SIO_000300: 13
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 24
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SIO_000300: 27
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SIO_000300: 29
SIO_000628: feature:10472080-10473821:-1:exon

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ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_033848800.1
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
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location: region:10473310-10559685:-1
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urn:…
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SIO_000628: feature:10534379-10534455:-1:exon

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SIO_000628: feature:10517390-10517569:-1:exon

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SIO_000628: feature:10498165-10498292:-1:exon

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SIO_000300: 20
SIO_000628: feature:10497891-10497991:-1:exon

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SIO_000628: feature:10496410-10496531:-1:exon

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SIO_000628: feature:10495570-10495656:-1:exon

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SIO_000628: feature:10493568-10493773:-1:exon

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SIO_000300: 25
SIO_000628: feature:10490548-10490690:-1:exon

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SIO_000628: feature:10483135-10483309:-1:exon

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SIO_000300: 27
SIO_000628: feature:10476494-10476616:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10473310-10473821:-1:exon

ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033848799.1
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
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location: region:10473310-10545140:-1
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urn:…
SIO_000300: 1
SIO_000628: feature:10544645-10545140:-1:exon

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urn:…
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urn:…
SIO_000300: 26
SIO_000628: feature:10490548-10490690:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10483135-10483309:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10476494-10476616:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:10473310-10473821:-1:exon

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X2
translation: MDQPGPPAPAREASENEVKYDTNNNEEEEGEQLDLDGVDEAPEADRRAPGAPEARDTGADSPAANTTIPAANTTIPATSTAAGSGHENGTGADTDALAEPLRPGVPTRVNPYSVIDITPLHEDQPPPPDPEAEGEGGGLHVPSGYSVPVPCGYAVPSGLPLLLPAYSSPALTPVGPAETQEGAEDSQLNSLSSEDPTNSEGPVHKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDEGGNSSLEYGWSSSEFESYEEQSDSESRNGVPQCFLRSDHKKQMQKLVKAAKEGTKDGLEKTKAAVKRGRSFIRTKSFASADHRPCLEEEQNLFIDVDCKHPEAVLTPMPEGLSQQQVVRRYILGSVVDSEKSYVDALKRILEQYEKPLSEMEPKILSERKLKTVFYRVKEVLQCHCMFQIALASRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQEASPDRVTLHSLMMKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLVRSDDVVETVYNDRGEIVKTKERRLFMLNDVLMCATVSARTSHDSGALTSTGQRYLLKWSVPLGHVEVIEYGGGEGAGENGRGPVVPAPESLAVVAGAKPNRVYMGPGQLYQDLQNLLHDLNVIGQITQLVGNLKGNYQNLNQSVAHDWTSGLQRLILKKEEEIRAADCCRIQLQLPGKQDKCGRPTFFTAVFNTFTAAIKESWINNLQMAKLALEEENHLGWFYVEDDGNQIKKERHPLLVGHMPVTVAKQQEFKIECAVYNPEPYLSNENQPDSFSTAHGFLWIGSCTSQMGQIAIVSFQNSSPKVIECFNVESRVLCMVYVPAEDRPREPESTGGRVLGIPTVCLGTEEGSISIYKSSQGSKKVRLQHFFTPEKSTVMSLACTPQSLYAGLVNGAVAIYARADDGSWNSEPQTVIKLGVLPVRSLLMMEDTLWAASGGQVSVISVETHAVESQLEAHQEEGMVVSHMAIAGVGIWLAFTSGSTLRLFHTETLKHLQDVNVATPVHHMLPGHQRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGLVSYHAHNGPVKFLVVATAASKADRDKPRDSPPPGTDPQDEDQRDTLPGEGPGPCPSRSGPDAVWLGASLGSLAQASDVSSTSGSPTPSQGSGSLGPRSEESFVQDPLRLPCSSPGRGRRARKAKASSVLVACGGQGHRRVSRKARQQRPEELASSVMVWQIPLLNV
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: complement(join(10473310..10473821,10476494..10476616,10483135..10483309,10490548..10490690,10492815..10492972,10493568..10493773,10495570..10495656,10496410..10496531,10497891..10497991,10498165..10498292,10498677..10498792,10507949..10508130,10509075..10509220,10510704..10510874,10513698..10513790,10515528..10515644,10517390..10517569,10517797..10517874,10521783..10521889,10524909..10525023,10530093..10530256,10532327..10532383,10534379..10534455,10537140..10537203,10538747..10539025,10539641..10539856,10544362..10544398))
location: region:10473310-10544398:-1
so has part: feature:10544362-10544398:-1:exon
so has part: feature:10539641-10539856:-1:exon
so has part: feature:10538747-10539025:-1:exon
so has part: feature:10537140-10537203:-1:exon
so has part: feature:10534379-10534455:-1:exon
so has part: feature:10532327-10532383:-1:exon
so has part: feature:10530093-10530256:-1:exon
so has part: feature:10524909-10525023:-1:exon
so has part: feature:10521783-10521889:-1:exon
so has part: feature:10517797-10517874:-1:exon
so has part: feature:10517390-10517569:-1:exon
so has part: feature:10515528-10515644:-1:exon
so has part: feature:10513698-10513790:-1:exon
so has part: feature:10510704-10510874:-1:exon
so has part: feature:10509075-10509220:-1:exon
so has part: feature:10507949-10508130:-1:exon
so has part: feature:10498677-10498792:-1:exon
so has part: feature:10498165-10498292:-1:exon
so has part: feature:10497891-10497991:-1:exon
so has part: feature:10496410-10496531:-1:exon
so has part: feature:10495570-10495656:-1:exon
so has part: feature:10493568-10493773:-1:exon
so has part: feature:10492815-10492972:-1:exon
so has part: feature:10490548-10490690:-1:exon
so has part: feature:10483135-10483309:-1:exon
so has part: feature:10476494-10476616:-1:exon
so has part: feature:10473310-10473821:-1:exon

XP_033704691.1
type: Protein
SIO_000068: ncbiprotein

position:10544398:-1
position: 10544398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10544362-10544398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10539641-10539856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10538747-10539025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10537140-10537203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10534379-10534455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10532327-10532383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10530093-10530256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10524909-10525023:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10521783-10521889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10517797-10517874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10517390-10517569:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10515528-10515644:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10513698-10513790:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10510704-10510874:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10509075-10509220:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10507949-10508130:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10498677-10498792:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10498165-10498292:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10497891-10497991:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10496410-10496531:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10495570-10495656:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10493568-10493773:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10492815-10492972:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10490548-10490690:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10483135-10483309:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10476494-10476616:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10473310-10473821:-1:exon

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X1
translation: MDQPGPPAPAREASENEVKYDTNNNEEEEGEQLDLDGVDEAPEADRRAPGAPEARDTGADSPAANTTIPAANTTIPATSTAAGSGHENGTGADTDALAEPLRPGVPTRVNPYSVIDITPLHEDQPPPPDPEAEGEGGGLHVPSGYSVPVPCGYAVPSGLPLLLPAYSSPALTPVGPAETQEGAEDSQLNSLSSEDPTNSEGPVHKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDEGGNSSLEYGWSSSEFESYEEQSDSESRNGVPQCFLRSDHKKQLSHDLTRLKEHYEKKMRHLVANAVGAVEIQQLKHKHELKMQKLVKAAKEGTKDGLEKTKAAVKRGRSFIRTKSFASADHRPCLEEEQNLFIDVDCKHPEAVLTPMPEGLSQQQVVRRYILGSVVDSEKSYVDALKRILEQYEKPLSEMEPKILSERKLKTVFYRVKEVLQCHCMFQIALASRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQEASPDRVTLHSLMMKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLVRSDDVVETVYNDRGEIVKTKERRLFMLNDVLMCATVSARTSHDSGALTSTGQRYLLKWSVPLGHVEVIEYGGGEGAGENGRGPVVPAPESLAVVAGAKPNRVYMGPGQLYQDLQNLLHDLNVIGQITQLVGNLKGNYQNLNQSVAHDWTSGLQRLILKKEEEIRAADCCRIQLQLPGKQDKCGRPTFFTAVFNTFTAAIKESWINNLQMAKLALEEENHLGWFYVEDDGNQIKKERHPLLVGHMPVTVAKQQEFKIECAVYNPEPYLSNENQPDSFSTAHGFLWIGSCTSQMGQIAIVSFQNSSPKVIECFNVESRVLCMVYVPAEDRPREPESTGGRVLGIPTVCLGTEEGSISIYKSSQGSKKVRLQHFFTPEKSTVMSLACTPQSLYAGLVNGAVAIYARADDGSWNSEPQTVIKLGVLPVRSLLMMEDTLWAASGGQVSVISVETHAVESQLEAHQEEGMVVSHMAIAGVGIWLAFTSGSTLRLFHTETLKHLQDVNVATPVHHMLPGHQRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGLVSYHAHNGPVKFLVVATAASKADRDKPRDSPPPGTDPQDEDQRDTLPGEGPGPCPSRSGPDAVWLGASLGSLAQASDVSSTSGSPTPSQGSGSLGPRSEESFVQDPLRLPCSSPGRGRRARKAKASSVLVACGGQGHRRVSRKARQQRPEELASSVMVWQIPLLNV
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: complement(join(10473310..10473821,10476494..10476616,10483135..10483309,10490548..10490690,10492815..10492972,10493568..10493773,10495570..10495656,10496410..10496531,10497891..10497991,10498165..10498292,10498677..10498792,10507949..10508130,10509075..10509220,10510704..10510874,10513698..10513790,10515528..10515644,10517390..10517569,10517797..10517874,10521783..10521889,10524909..10525023,10527717..10527833,10530093..10530256,10532327..10532383,10534379..10534455,10537140..10537203,10538747..10539025,10539641..10539856,10544362..10544398))
location: region:10473310-10544398:-1
so has part: feature:10544362-10544398:-1:exon
so has part: feature:10539641-10539856:-1:exon
so has part: feature:10538747-10539025:-1:exon
so has part: feature:10537140-10537203:-1:exon
so has part: feature:10534379-10534455:-1:exon
so has part: feature:10532327-10532383:-1:exon
so has part: feature:10530093-10530256:-1:exon
so has part: feature:10527717-10527833:-1:exon
so has part: feature:10524909-10525023:-1:exon
so has part: feature:10521783-10521889:-1:exon
so has part: feature:10517797-10517874:-1:exon
so has part: feature:10517390-10517569:-1:exon
so has part: feature:10515528-10515644:-1:exon
so has part: feature:10513698-10513790:-1:exon
so has part: feature:10510704-10510874:-1:exon
so has part: feature:10509075-10509220:-1:exon
so has part: feature:10507949-10508130:-1:exon
so has part: feature:10498677-10498792:-1:exon
so has part: feature:10498165-10498292:-1:exon
so has part: feature:10497891-10497991:-1:exon
so has part: feature:10496410-10496531:-1:exon
so has part: feature:10495570-10495656:-1:exon
so has part: feature:10493568-10493773:-1:exon
so has part: feature:10492815-10492972:-1:exon
so has part: feature:10490548-10490690:-1:exon
so has part: feature:10483135-10483309:-1:exon
so has part: feature:10476494-10476616:-1:exon
so has part: feature:10473310-10473821:-1:exon

XP_033704690.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10544362-10544398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10539641-10539856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10538747-10539025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10537140-10537203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10534379-10534455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10532327-10532383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10530093-10530256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10527717-10527833:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10524909-10525023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10521783-10521889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10517797-10517874:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10517390-10517569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10515528-10515644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10513698-10513790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10510704-10510874:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10509075-10509220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10507949-10508130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10498677-10498792:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10498165-10498292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10497891-10497991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10496410-10496531:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10495570-10495656:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10493568-10493773:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10492815-10492972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10490548-10490690:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10483135-10483309:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10476494-10476616:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10473310-10473821:-1:exon

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X1
translation: MDQPGPPAPAREASENEVKYDTNNNEEEEGEQLDLDGVDEAPEADRRAPGAPEARDTGADSPAANTTIPAANTTIPATSTAAGSGHENGTGADTDALAEPLRPGVPTRVNPYSVIDITPLHEDQPPPPDPEAEGEGGGLHVPSGYSVPVPCGYAVPSGLPLLLPAYSSPALTPVGPAETQEGAEDSQLNSLSSEDPTNSEGPVHKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDEGGNSSLEYGWSSSEFESYEEQSDSESRNGVPQCFLRSDHKKQLSHDLTRLKEHYEKKMRHLVANAVGAVEIQQLKHKHELKMQKLVKAAKEGTKDGLEKTKAAVKRGRSFIRTKSFASADHRPCLEEEQNLFIDVDCKHPEAVLTPMPEGLSQQQVVRRYILGSVVDSEKSYVDALKRILEQYEKPLSEMEPKILSERKLKTVFYRVKEVLQCHCMFQIALASRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQEASPDRVTLHSLMMKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLVRSDDVVETVYNDRGEIVKTKERRLFMLNDVLMCATVSARTSHDSGALTSTGQRYLLKWSVPLGHVEVIEYGGGEGAGENGRGPVVPAPESLAVVAGAKPNRVYMGPGQLYQDLQNLLHDLNVIGQITQLVGNLKGNYQNLNQSVAHDWTSGLQRLILKKEEEIRAADCCRIQLQLPGKQDKCGRPTFFTAVFNTFTAAIKESWINNLQMAKLALEEENHLGWFYVEDDGNQIKKERHPLLVGHMPVTVAKQQEFKIECAVYNPEPYLSNENQPDSFSTAHGFLWIGSCTSQMGQIAIVSFQNSSPKVIECFNVESRVLCMVYVPAEDRPREPESTGGRVLGIPTVCLGTEEGSISIYKSSQGSKKVRLQHFFTPEKSTVMSLACTPQSLYAGLVNGAVAIYARADDGSWNSEPQTVIKLGVLPVRSLLMMEDTLWAASGGQVSVISVETHAVESQLEAHQEEGMVVSHMAIAGVGIWLAFTSGSTLRLFHTETLKHLQDVNVATPVHHMLPGHQRLSVTSLLVCHGLLMVGTSLGVVVALPVPRLQGIPKVTGRGLVSYHAHNGPVKFLVVATAASKADRDKPRDSPPPGTDPQDEDQRDTLPGEGPGPCPSRSGPDAVWLGASLGSLAQASDVSSTSGSPTPSQGSGSLGPRSEESFVQDPLRLPCSSPGRGRRARKAKASSVLVACGGQGHRRVSRKARQQRPEELASSVMVWQIPLLNV
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: complement(join(10473310..10473821,10476494..10476616,10483135..10483309,10490548..10490690,10492815..10492972,10493568..10493773,10495570..10495656,10496410..10496531,10497891..10497991,10498165..10498292,10498677..10498792,10507949..10508130,10509075..10509220,10510704..10510874,10513698..10513790,10515528..10515644,10517390..10517569,10517797..10517874,10521783..10521889,10524909..10525023,10527717..10527833,10530093..10530256,10532327..10532383,10534379..10534455,10537140..10537203,10538747..10539025,10539641..10539856,10544362..10544398))
location: region:10473310-10544398:-1
so has part: feature:10544362-10544398:-1:exon
so has part: feature:10539641-10539856:-1:exon
so has part: feature:10538747-10539025:-1:exon
so has part: feature:10537140-10537203:-1:exon
so has part: feature:10534379-10534455:-1:exon
so has part: feature:10532327-10532383:-1:exon
so has part: feature:10530093-10530256:-1:exon
so has part: feature:10527717-10527833:-1:exon
so has part: feature:10524909-10525023:-1:exon
so has part: feature:10521783-10521889:-1:exon
so has part: feature:10517797-10517874:-1:exon
so has part: feature:10517390-10517569:-1:exon
so has part: feature:10515528-10515644:-1:exon
so has part: feature:10513698-10513790:-1:exon
so has part: feature:10510704-10510874:-1:exon
so has part: feature:10509075-10509220:-1:exon
so has part: feature:10507949-10508130:-1:exon
so has part: feature:10498677-10498792:-1:exon
so has part: feature:10498165-10498292:-1:exon
so has part: feature:10497891-10497991:-1:exon
so has part: feature:10496410-10496531:-1:exon
so has part: feature:10495570-10495656:-1:exon
so has part: feature:10493568-10493773:-1:exon
so has part: feature:10492815-10492972:-1:exon
so has part: feature:10490548-10490690:-1:exon
so has part: feature:10483135-10483309:-1:exon
so has part: feature:10476494-10476616:-1:exon
so has part: feature:10473310-10473821:-1:exon

XP_019777139.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10544362-10544398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10539641-10539856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10538747-10539025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10537140-10537203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10534379-10534455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10532327-10532383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10530093-10530256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10527717-10527833:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10524909-10525023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10521783-10521889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10517797-10517874:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10517390-10517569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10515528-10515644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10513698-10513790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10510704-10510874:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10509075-10509220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10507949-10508130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10498677-10498792:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10498165-10498292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10497891-10497991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10496410-10496531:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10495570-10495656:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10493568-10493773:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10492815-10492972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10490548-10490690:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10483135-10483309:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10476494-10476616:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:10473310-10473821:-1:exon

ARHGEF10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ARHGEF10
product: Rho guanine nucleotide exchange factor 10, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_033848801.1
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: complement(join(10486559..10487320,10490548..10490690,10492815..10492972,10493568..10493773,10495570..10495656,10496410..10496531,10497891..10497991,10498165..10498292,10498677..10498792,10507949..10508130,10509075..10509220,10510704..10510874,10513698..10513790,10515528..10515644,10517390..10517569,10517797..10517874,10521783..10521889,10524909..10525023,10527717..10527833,10530093..10530256,10532327..10532383,10534379..10534455,10537140..10537203,10538747..10539025,10539641..10539856,10544362..10544441,10559598..10559685))
location: region:10486559-10559685:-1
so has part: feature:10559598-10559685:-1:exon
so has part: feature:10544362-10544441:-1:exon
so has part: feature:10539641-10539856:-1:exon
so has part: feature:10538747-10539025:-1:exon
so has part: feature:10537140-10537203:-1:exon
so has part: feature:10534379-10534455:-1:exon
so has part: feature:10532327-10532383:-1:exon
so has part: feature:10530093-10530256:-1:exon
so has part: feature:10527717-10527833:-1:exon
so has part: feature:10524909-10525023:-1:exon
so has part: feature:10521783-10521889:-1:exon
so has part: feature:10517797-10517874:-1:exon
so has part: feature:10517390-10517569:-1:exon
so has part: feature:10515528-10515644:-1:exon
so has part: feature:10513698-10513790:-1:exon
so has part: feature:10510704-10510874:-1:exon
so has part: feature:10509075-10509220:-1:exon
so has part: feature:10507949-10508130:-1:exon
so has part: feature:10498677-10498792:-1:exon
so has part: feature:10498165-10498292:-1:exon
so has part: feature:10497891-10497991:-1:exon
so has part: feature:10496410-10496531:-1:exon
so has part: feature:10495570-10495656:-1:exon
so has part: feature:10493568-10493773:-1:exon
so has part: feature:10492815-10492972:-1:exon
so has part: feature:10490548-10490690:-1:exon
so has part: feature:10486559-10487320:-1:exon

position:10486559:-1
position: 10486559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10559598-10559685:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10544362-10544441:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10539641-10539856:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10538747-10539025:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10537140-10537203:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10534379-10534455:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10532327-10532383:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10530093-10530256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10527717-10527833:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10524909-10525023:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10521783-10521889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10517797-10517874:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10517390-10517569:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10515528-10515644:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10513698-10513790:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10510704-10510874:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10509075-10509220:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10507949-10508130:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10498677-10498792:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10498165-10498292:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10497891-10497991:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10496410-10496531:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10495570-10495656:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10493568-10493773:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10492815-10492972:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10490548-10490690:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:10486559-10487320:-1:exon

position:10487320:-1
position: 10487320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARHGEF10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ARHGEF10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 10 isoform X3
translation: MDQPGPPAPAREASENEVKYDTNNNEEEEGEQLDLDGVDEAPEADRRAPGAPEARDTGADSPAANTTIPAANTTIPATSTAAGSGHENGTGADTDALAEPLRPGVPTRVNPYSVIDITPLHEDQPPPPDPEAEGEGGGLHVPSGYSVPVPCGYAVPSGLPLLLPAYSSPALTPVGPAETQEGAEDSQLNSLSSEDPTNSEGPVHKEDSALARWVADPANTAWMENPEEAIYDDVPRENSDSEPDEMIYDDVENGDEGGNSSLEYGWSSSEFESYEEQSDSESRNGVPQCFLRSDHKKQLSHDLTRLKEHYEKKMRHLVANAVGAVEIQQLKHKHELKMQKLVKAAKEGTKDGLEKTKAAVKRGRSFIRTKSFASADHRPCLEEEQNLFIDVDCKHPEAVLTPMPEGLSQQQVVRRYILGSVVDSEKSYVDALKRILEQYEKPLSEMEPKILSERKLKTVFYRVKEVLQCHCMFQIALASRVAEWDSVEMIGDVFVASFSKSMVLDAYSEYVNNFSTAVAILKKTCATKPAFLEFLKQCQEASPDRVTLHSLMMKPIQRFPQFILLLQDMLKNTPRGHPDRLPLQMALTELETLAEKLNERKRDADQRCEIKQIAKAINERYLNKLLSSGSRYLVRSDDVVETVYNDRGEIVKTKERRLFMLNDVLMCATVSARTSHDSGALTSTGQRYLLKWSVPLGHVEVIEYGGGEGAGENGRGPVVPAPESLAVVAGAKPNRVYMGPGQLYQDLQNLLHDLNVIGQITQLVGNLKGNYQNLNQSVAHDWTSGLQRLILKKEEEIRAADCCRIQLQLPGKQDKCGRPTFFTAVFNTFTAAIKESWINNLQMAKLALEEENHLGWFYVEDDGNQIKKERHPLLVGHMPVTVAKQQEFKIECAVYNPEPYLSNENQPDSFSTAHGFLWIGSCTSQMGQIAIVSFQNSSPKVIECFNVESRVLCMVYVPAEDRPREPESTGGRVLGIPTVCLGTEEGSISIYKSSQGSKKVRLQHFFTPEKSTVMSLACTPQSLYAGLVNGAVAIYARADDGSWNSEPQTVIKLGVLPVRSLLMMEDTLWAASGGQVSVISVETHAVECS
SIO_010081: ARHGEF10
subclass of: SO_0000673
so part of: ARHGEF10
location: complement(join(10487312..10487320,10490548..10490690,10492815..10492972,10493568..10493773,10495570..10495656,10496410..10496531,10497891..10497991,10498165..10498292,10498677..10498792,10507949..10508130,10509075..10509220,10510704..10510874,10513698..10513790,10515528..10515644,10517390..10517569,10517797..10517874,10521783..10521889,10524909..10525023,10527717..10527833,10530093..10530256,10532327..10532383,10534379..10534455,10537140..10537203,10538747..10539025,10539641..10539856,10544362..10544398))
location: region:10487312-10544398:-1
so has part: feature:10544362-10544398:-1:exon
so has part: feature:10539641-10539856:-1:exon
so has part: feature:10538747-10539025:-1:exon
so has part: feature:10537140-10537203:-1:exon
so has part: feature:10534379-10534455:-1:exon
so has part: feature:10532327-10532383:-1:exon
so has part: feature:10530093-10530256:-1:exon
so has part: feature:10527717-10527833:-1:exon
so has part: feature:10524909-10525023:-1:exon
so has part: feature:10521783-10521889:-1:exon
so has part: feature:10517797-10517874:-1:exon
so has part: feature:10517390-10517569:-1:exon
so has part: feature:10515528-10515644:-1:exon
so has part: feature:10513698-10513790:-1:exon
so has part: feature:10510704-10510874:-1:exon
so has part: feature:10509075-10509220:-1:exon
so has part: feature:10507949-10508130:-1:exon
so has part: feature:10498677-10498792:-1:exon
so has part: feature:10498165-10498292:-1:exon
so has part: feature:10497891-10497991:-1:exon
so has part: feature:10496410-10496531:-1:exon
so has part: feature:10495570-10495656:-1:exon
so has part: feature:10493568-10493773:-1:exon
so has part: feature:10492815-10492972:-1:exon
so has part: feature:10490548-10490690:-1:exon
so has part: feature:10487312-10487320:-1:exon

XP_033704692.1
type: Protein
SIO_000068: ncbiprotein

position:10487312:-1
position: 10487312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10544362-10544398:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10539641-10539856:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10538747-10539025:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10537140-10537203:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10534379-10534455:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10532327-10532383:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10530093-10530256:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10527717-10527833:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10524909-10525023:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10521783-10521889:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10517797-10517874:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10517390-10517569:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10515528-10515644:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10513698-10513790:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10510704-10510874:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10509075-10509220:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10507949-10508130:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:10498677-10498792:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:10498165-10498292:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:10497891-10497991:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:10496410-10496531:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:10495570-10495656:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:10493568-10493773:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:10492815-10492972:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:10490548-10490690:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:10487312-10487320:-1:exon

LOC117310079
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310079
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(10589651..10589768)
location: region:10589651-10589768:-1
so has part: feature:10589651-10589768:-1:exon

117310079
type: Gene
SIO_000068: ncbigene

position:10589651:-1
position: 10589651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10589768:-1
position: 10589768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10589651-10589768:-1:exon

LOC117310079
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC117310079
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00156
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC117310079
subclass of: SO_0000673
so part of: LOC117310079
location: complement(10589651..10589768)
location: region:10589651-10589768:-1
so has part: feature:10589651-10589768:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10589651-10589768:-1:exon

CLN8
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10611889..10645345)
location: region:10611889-10645345:-1
so has part: feature:10611889-10645345:-1:exon
subclass of: SO_0000010

101335736
type: Gene
SIO_000068: ncbigene

position:10611889:-1
position: 10611889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10645345:-1
position: 10645345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10611889-10645345:-1:exon

CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173512.2
SIO_010081: CLN8
so part of: CLN8
location: complement(join(10611889..10614232,10615551..10616778,10617505..10617626,10617961..10618243,10619759..10619904,10620953..10621050,10623472..10623551,10623706..10625248,10627770..10628204,10629338..10629430,10629937..10630050,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10645345))
location: region:10611889-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10632314-10632536:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10629937-10630050:-1:exon
so has part: feature:10629338-10629430:-1:exon
so has part: feature:10627770-10628204:-1:exon
so has part: feature:10623706-10625248:-1:exon
so has part: feature:10623472-10623551:-1:exon
so has part: feature:10620953-10621050:-1:exon
so has part: feature:10619759-10619904:-1:exon
so has part: feature:10617961-10618243:-1:exon
so has part: feature:10617505-10617626:-1:exon
so has part: feature:10615551-10616778:-1:exon
so has part: feature:10611889-10614232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

position:10643380:-1
position: 10643380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

position:10641666:-1
position: 10641666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10642289:-1
position: 10642289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10632314-10632536:-1:exon

position:10632314:-1
position: 10632314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10632536:-1
position: 10632536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10631492-10631726:-1:exon

position:10631492:-1
position: 10631492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10631726:-1
position: 10631726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10631051-10631162:-1:exon

position:10631051:-1
position: 10631051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10631162:-1
position: 10631162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10629937-10630050:-1:exon

position:10629937:-1
position: 10629937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10630050:-1
position: 10630050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10629338-10629430:-1:exon

position:10629338:-1
position: 10629338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10629430:-1
position: 10629430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10627770-10628204:-1:exon

position:10627770:-1
position: 10627770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10628204:-1
position: 10628204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10623706-10625248:-1:exon

position:10623706:-1
position: 10623706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10625248:-1
position: 10625248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10623472-10623551:-1:exon

position:10623472:-1
position: 10623472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10623551:-1
position: 10623551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10620953-10621050:-1:exon

position:10620953:-1
position: 10620953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10621050:-1
position: 10621050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:10619759-10619904:-1:exon

position:10619759:-1
position: 10619759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10619904:-1
position: 10619904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:10617961-10618243:-1:exon

position:10617961:-1
position: 10617961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10618243:-1
position: 10618243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:10617505-10617626:-1:exon

position:10617505:-1
position: 10617505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10617626:-1
position: 10617626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:10615551-10616778:-1:exon

position:10615551:-1
position: 10615551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10616778:-1
position: 10616778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:10611889-10614232:-1:exon

position:10614232:-1
position: 10614232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173507.2
SIO_010081: CLN8
so part of: CLN8
location: complement(join(10611889..10614232,10615551..10616778,10617505..10617626,10617961..10618243,10619759..10619904,10620953..10621073,10623472..10623551,10623706..10625248,10627770..10628204,10629338..10629430,10629937..10630050,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10645345))
location: region:10611889-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10632314-10632536:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10629937-10630050:-1:exon
so has part: feature:10629338-10629430:-1:exon
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CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173506.2
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CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173503.2
SIO_010081: CLN8
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CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173501.2
SIO_010081: CLN8
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CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173500.2
SIO_010081: CLN8
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CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173496.2
SIO_010081: CLN8
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CLN8
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subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
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SIO_010081: CLN8
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SIO_000628: feature:10623706-10625248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10622167-10623551:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10620953-10621073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10619759-10619904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10617961-10618243:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10617505-10617626:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10615551-10616778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10611889-10614232:-1:exon

CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173516.2
SIO_010081: CLN8
so part of: CLN8
location: complement(join(10611889..10614232,10615551..10616778,10617505..10617626,10617961..10618243,10619759..10619904,10620953..10621050,10623472..10623571,10623706..10625248,10627770..10628204,10629338..10629430,10629937..10630050,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10645345))
location: region:10611889-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10632314-10632536:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10629937-10630050:-1:exon
so has part: feature:10629338-10629430:-1:exon
so has part: feature:10627770-10628204:-1:exon
so has part: feature:10623706-10625248:-1:exon
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so has part: feature:10619759-10619904:-1:exon
so has part: feature:10617961-10618243:-1:exon
so has part: feature:10617505-10617626:-1:exon
so has part: feature:10615551-10616778:-1:exon
so has part: feature:10611889-10614232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10632314-10632536:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:10629937-10630050:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10629338-10629430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10627770-10628204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10623706-10625248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10623472-10623571:-1:exon

position:10623571:-1
position: 10623571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10620953-10621050:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10619759-10619904:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:10617961-10618243:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10617505-10617626:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10615551-10616778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10611889-10614232:-1:exon

CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173513.2
SIO_010081: CLN8
so part of: CLN8
location: complement(join(10611889..10614232,10615551..10616778,10617505..10617626,10617961..10618243,10619759..10619904,10620953..10621073,10623472..10623571,10623706..10625248,10627770..10628204,10629338..10629430,10629937..10630050,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10645345))
location: region:10611889-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10632314-10632536:-1:exon
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so has part: feature:10619759-10619904:-1:exon
so has part: feature:10617961-10618243:-1:exon
so has part: feature:10617505-10617626:-1:exon
so has part: feature:10615551-10616778:-1:exon
so has part: feature:10611889-10614232:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10632314-10632536:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:10629937-10630050:-1:exon

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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:10627770-10628204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10623706-10625248:-1:exon

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SIO_000300: 10
SIO_000628: feature:10623472-10623571:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10620953-10621073:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10619759-10619904:-1:exon

urn:…
SIO_000300: 13
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urn:…
SIO_000300: 14
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urn:…
SIO_000300: 15
SIO_000628: feature:10615551-10616778:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10611889-10614232:-1:exon

CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_002173505.2
SIO_010081: CLN8
so part of: CLN8
location: complement(join(10611889..10614232,10615551..10616778,10617505..10617626,10617961..10618243,10619759..10619904,10620953..10621073,10622167..10622208,10623472..10623571,10623706..10625248,10627770..10628204,10629338..10629430,10629937..10630050,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10645345))
location: region:10611889-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10632314-10632536:-1:exon
so has part: feature:10631492-10631726:-1:exon
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so has part: feature:10629338-10629430:-1:exon
so has part: feature:10627770-10628204:-1:exon
so has part: feature:10623706-10625248:-1:exon
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so has part: feature:10620953-10621073:-1:exon
so has part: feature:10619759-10619904:-1:exon
so has part: feature:10617961-10618243:-1:exon
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so has part: feature:10615551-10616778:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

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SIO_000300: 3
SIO_000628: feature:10632314-10632536:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:10629937-10630050:-1:exon

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SIO_000300: 7
SIO_000628: feature:10629338-10629430:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10627770-10628204:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10623706-10625248:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10623472-10623571:-1:exon

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SIO_000300: 11
SIO_000628: feature:10622167-10622208:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:10620953-10621073:-1:exon

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SIO_000300: 13
SIO_000628: feature:10619759-10619904:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:10617961-10618243:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:10617505-10617626:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:10615551-10616778:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:10611889-10614232:-1:exon

CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_002173532.2
SIO_010081: CLN8
so part of: CLN8
location: complement(join(10628595..10629430,10629937..10630050,10631051..10631162,10631492..10631726,10641666..10642289,10643380..10645345))
location: region:10628595-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
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so has part: feature:10629937-10630050:-1:exon
so has part: feature:10628595-10629430:-1:exon

position:10628595:-1
position: 10628595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10631492-10631726:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:10629937-10630050:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10628595-10629430:-1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_019921272.2
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10629938..10630050,10630172..10630303,10631051..10631162,10631492..10631726,10641666..10642289,10643380..10645345))
location: region:10629938-10645345:-1
so has part: feature:10643380-10645345:-1:exon
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position:10629938:-1
position: 10629938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

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SIO_000300: 3
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SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10630172-10630303:-1:exon

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position: 10630172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10630303:-1
position: 10630303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10629938-10630050:-1:exon

CLN8
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_002173531.2
SIO_010081: CLN8
so part of: CLN8
location: complement(join(10629938..10630050,10630172..10630303,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10645345))
location: region:10629938-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
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so has part: feature:10630172-10630303:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10632314-10632536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10631492-10631726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10630172-10630303:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10629938-10630050:-1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019921270.2
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10629942..10630303,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10645345))
location: region:10629942-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
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so has part: feature:10631051-10631162:-1:exon
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position:10629942:-1
position: 10629942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

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SIO_000300: 3
SIO_000628: feature:10632314-10632536:-1:exon

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SIO_000300: 4
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SIO_000300: 5
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10629942-10630303:-1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_019921271.2
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10629943..10630303,10631051..10631162,10631492..10631726,10641666..10642289,10643380..10645345))
location: region:10629943-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
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so has part: feature:10631051-10631162:-1:exon
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position:10629943:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

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SIO_000300: 3
SIO_000628: feature:10631492-10631726:-1:exon

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SIO_000300: 4
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10629943-10630303:-1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8 isoform X2
translation: MGTVTQTAWQACGKDKVEDGRMRVPGPWPGAACGPRPSLYDVGSMSLPSSGPAGSIFDLDCTSGQVRWALVAAGCTFYLGVFVACHQLSSSLNATYRSLGAREQVFWNLAATRAVFGIQGTTAGLRALLLDPVLQADKVLGQQNWCWFHITTATGFFLFENLALHVSNVLFHTFDGFLAVHHLFAFLGFLGCVVNLQAGHYLPMITLLLEMSTPFTCISWMLLKNHNWKGARFSHSFFGLYRDHPQLFSKKYGASLVHSRDFISTQDRPRAQNVGAFTDFAQKAKLQKVQGQPRQDSHFPSSGSPALVTGTGLRPGKQASPGASLRCCTARPAPSGSPVSFPASVTPRYCVREPVTEDVLLSSLSWRHPERRHGVCTLV
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10630183..10630303,10631051..10631162,10631492..10631726,10641666..10642289,10643380..10643427))
location: region:10630183-10643427:-1
so has part: feature:10643380-10643427:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10630183-10630303:-1:exon

XP_019776830.1
type: Protein
SIO_000068: ncbiprotein

position:10630183:-1
position: 10630183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10643427:-1
position: 10643427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10643427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10631492-10631726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10630183-10630303:-1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8 isoform X2
translation: MGTVTQTAWQACGKDKVEDGRMRVPGPWPGAACGPRPSLYDVGSMSLPSSGPAGSIFDLDCTSGQVRWALVAAGCTFYLGVFVACHQLSSSLNATYRSLGAREQVFWNLAATRAVFGIQGTTAGLRALLLDPVLQADKVLGQQNWCWFHITTATGFFLFENLALHVSNVLFHTFDGFLAVHHLFAFLGFLGCVVNLQAGHYLPMITLLLEMSTPFTCISWMLLKNHNWKGARFSHSFFGLYRDHPQLFSKKYGASLVHSRDFISTQDRPRAQNVGAFTDFAQKAKLQKVQGQPRQDSHFPSSGSPALVTGTGLRPGKQASPGASLRCCTARPAPSGSPVSFPASVTPRYCVREPVTEDVLLSSLSWRHPERRHGVCTLV
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10630183..10630303,10631051..10631162,10631492..10631726,10641666..10642289,10643380..10643427))
location: region:10630183-10643427:-1
so has part: feature:10643380-10643427:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10630183-10630303:-1:exon

XP_019776831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10643427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10631492-10631726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10630183-10630303:-1:exon

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8 isoform X1
translation: MGTVTQTAWQACGKDKVEDGRMRVPGPWPGAACGPRPSLYDVGSMSLPSSGPAGSIFDLDCTSGQVRWALVAAGCTFYLGVFVACHQLSSSLNATYRSLGAREQVFWNLAATRAVFGIQGTTAGLRALLLDPVLQADKVLGQQNWCWFHITTATGFFLFENLALHVSNVLFHTFDGFLAVHHLFAFLGFLGCVVNLQAGHYLPMITLLLEMSTPFTCISWMLLKVMFSEVAISEVCFLPLMAGNAVLWIGPCPSGACSSPHSPAEPSYAEQGSCTVTRRPTRWGGPWEPLLALCPGAHEPQLEGGTFQPQFLWFVSRSPSALFQEIRSLFGPLQRFYFHTRQTKSPECWSLHGFCAESQASESSRPATPGLSFSIFRFPRPCHGDRPKAREAGVPGGISALLHGPARPLWIACQLPRIRHPSILRA
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10630265..10630303,10631051..10631162,10631492..10631726,10632314..10632536,10641666..10642289,10643380..10643427))
location: region:10630265-10643427:-1
so has part: feature:10643380-10643427:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10632314-10632536:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10630265-10630303:-1:exon

XP_019776829.1
type: Protein
SIO_000068: ncbiprotein

position:10630265:-1
position: 10630265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10643427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10632314-10632536:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10631492-10631726:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10630265-10630303:-1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033848831.1
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10630669..10630713,10631051..10631162,10631492..10631726,10641666..10642289,10643380..10645345))
location: region:10630669-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10630669-10630713:-1:exon

position:10630669:-1
position: 10630669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10631492-10631726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10630669-10630713:-1:exon

position:10630713:-1
position: 10630713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8 isoform X3
translation: MGTVTQTAWQACGKDKVEDGRMRVPGPWPGAACGPRPSLYDVGSMSLPSSGPAGSIFDLDCTSGQVRWALVAAGCTFYLGVFVACHQLSSSLNATYRSLGAREQVFWNLAATRAVFGIQGTTAGLRALLLDPVLQADKVLGQQNWCWFHITTATGFFLFENLALHVSNVLFHTFDGFLAVHHLFAFLGFLGCVVNLQAGHYLPMITLLLEMSTPFTCISWMLLKNHNWKGARFSHSFFGLYRDHPQLFSKKYGASLVHSRDFISTQDRPRAQNVGAFTDFAQKAKLQKVQGQPRQDSHFPSSGSPALVTGTGLRPGKQASPGASLRCCTARPAPSGSPVRAQAPDTQAQ
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10630683..10630713,10631051..10631162,10631492..10631726,10641666..10642289,10643380..10643427))
location: region:10630683-10643427:-1
so has part: feature:10643380-10643427:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10631492-10631726:-1:exon
so has part: feature:10631051-10631162:-1:exon
so has part: feature:10630683-10630713:-1:exon

XP_033704722.1
type: Protein
SIO_000068: ncbiprotein

position:10630683:-1
position: 10630683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10643427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10631492-10631726:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10631051-10631162:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10630683-10630713:-1:exon

CLN8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CLN8
product: CLN8 transmembrane ER and ERGIC protein, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 75 samples with support for all annotated introns
transcript id: XM_004313401.3
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10633952..10635609,10641666..10642289,10643380..10645345))
location: region:10633952-10645345:-1
so has part: feature:10643380-10645345:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10633952-10635609:-1:exon

position:10633952:-1
position: 10633952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10645345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10633952-10635609:-1:exon

position:10635609:-1
position: 10635609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CLN8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: CLN8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein CLN8 isoform X4
translation: MGTVTQTAWQACGKDKVEDGRMRVPGPWPGAACGPRPSLYDVGSMSLPSSGPAGSIFDLDCTSGQVRWALVAAGCTFYLGVFVACHQLSSSLNATYRSLGAREQVFWNLAATRAVFGIQGTTAGLRALLLDPVLQADKVLGQQNWCWFHITTATGFFLFENLALHVSNVLFHTFDGFLAVHHLFAFLGFLGCVVNLQAGHYLPMITLLLEMSTPFTCISWMLLKAGCADSLLWRLNQWLMVHLFHCRMVLTYHMWWVCLGHWDGLARSLFPPHWALFVVGLGLLTVLINPYWTRKKTQQLLNPVDWNFAPGRPNGPAPPKKTR
SIO_010081: CLN8
subclass of: SO_0000673
so part of: CLN8
location: complement(join(10635310..10635609,10641666..10642289,10643380..10643427))
location: region:10635310-10643427:-1
so has part: feature:10643380-10643427:-1:exon
so has part: feature:10641666-10642289:-1:exon
so has part: feature:10635310-10635609:-1:exon

XP_004313449.2
type: Protein
SIO_000068: ncbiprotein

position:10635310:-1
position: 10635310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10643380-10643427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10641666-10642289:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10635310-10635609:-1:exon

LOC109547642
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC109547642
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10647294..10648659
location: region:10647294-10648659:1
so has part: feature:10647294-10648659:1:exon
subclass of: SO_0000011

109547642
type: Gene
SIO_000068: ncbigene

position:10647294:1
position: 10647294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10648659:1
position: 10648659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10647294-10648659:1:exon

LOC109547642
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547642
product: uncharacterized LOC109547642
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XR_002173535.2
SIO_010081: LOC109547642
subclass of: SO_0000673
so part of: LOC109547642
location: join(10647294..10647394,10648162..10648659)
location: region:10647294-10648659:1
so has part: feature:10647294-10647394:1:exon
so has part: feature:10648162-10648659:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10647294-10647394:1:exon

position:10647394:1
position: 10647394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10648162-10648659:1:exon

position:10648162:1
position: 10648162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117310010
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 10649363..10650773
location: region:10649363-10650773:1
so has part: feature:10649363-10650773:1:exon

117310010
type: Gene
SIO_000068: ncbigene

position:10649363:1
position: 10649363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10650773:1
position: 10650773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10649363-10650773:1:exon

LOC117310010
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC117310010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117310010
subclass of: SO_0000673
so part of: LOC117310010
location: 10649363..10650342
location: region:10649363-10650342:1
so has part: feature:10649363-10650342:1:exon

position:10650342:1
position: 10650342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10649363-10650342:1:exon

LOC117310010
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC117310010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117310010
subclass of: SO_0000673
so part of: LOC117310010
location: 10650383..10650773
location: region:10650383-10650773:1
so has part: feature:10650383-10650773:1:exon

position:10650383:1
position: 10650383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10650383-10650773:1:exon

LOC101337005
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101337005
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10653540..10662677
location: region:10653540-10662677:1
so has part: feature:10653540-10662677:1:exon
subclass of: SO_0000011

101337005
type: Gene
SIO_000068: ncbigene

position:10653540:1
position: 10653540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10662677:1
position: 10662677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10653540-10662677:1:exon

LOC101337005
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC101337005
product: uncharacterized LOC101337005
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002173536.2
SIO_010081: LOC101337005
subclass of: SO_0000673
so part of: LOC101337005
location: join(10653540..10653606,10659468..10659549,10662216..10662677)
location: region:10653540-10662677:1
so has part: feature:10653540-10653606:1:exon
so has part: feature:10659468-10659549:1:exon
so has part: feature:10662216-10662677:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10653540-10653606:1:exon

position:10653606:1
position: 10653606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10659468-10659549:1:exon

position:10659468:1
position: 10659468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10659549:1
position: 10659549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10662216-10662677:1:exon

position:10662216:1
position: 10662216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DLGAP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: DLGAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10676720..10773343)
location: region:10676720-10773343:-1
so has part: feature:10676720-10773343:-1:exon
subclass of: SO_0000010

101336720
type: Gene
SIO_000068: ncbigene

position:10676720:-1
position: 10676720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10773343:-1
position: 10773343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10676720-10773343:-1:exon

DLGAP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: DLGAP2
product: DLG associated protein 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 8 Proteins, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_019921235.2
SIO_010081: DLGAP2
subclass of: SO_0000673
so part of: DLGAP2
location: complement(join(10676720..10677317,10679722..10679874,10685975..10686066,10695090..10695505,10697138..10697223,10703165..10703206,10704110..10704459,10725542..10725761,10730601..10730748,10759781..10759992,10772327..10773343))
location: region:10676720-10773343:-1
so has part: feature:10772327-10773343:-1:exon
so has part: feature:10759781-10759992:-1:exon
so has part: feature:10730601-10730748:-1:exon
so has part: feature:10725542-10725761:-1:exon
so has part: feature:10704110-10704459:-1:exon
so has part: feature:10703165-10703206:-1:exon
so has part: feature:10697138-10697223:-1:exon
so has part: feature:10695090-10695505:-1:exon
so has part: feature:10685975-10686066:-1:exon
so has part: feature:10679722-10679874:-1:exon
so has part: feature:10676720-10677317:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10772327-10773343:-1:exon

position:10772327:-1
position: 10772327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10759781-10759992:-1:exon

position:10759781:-1
position: 10759781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10759992:-1
position: 10759992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10730601-10730748:-1:exon

position:10730601:-1
position: 10730601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10730748:-1
position: 10730748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:10725542-10725761:-1:exon

position:10725542:-1
position: 10725542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10725761:-1
position: 10725761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:10704110-10704459:-1:exon

position:10704110:-1
position: 10704110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10704459:-1
position: 10704459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:10703165-10703206:-1:exon

position:10703165:-1
position: 10703165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10703206:-1
position: 10703206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:10697138-10697223:-1:exon

position:10697138:-1
position: 10697138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10697223:-1
position: 10697223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:10695090-10695505:-1:exon

position:10695090:-1
position: 10695090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10695505:-1
position: 10695505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:10685975-10686066:-1:exon

position:10685975:-1
position: 10685975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10686066:-1
position: 10686066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:10679722-10679874:-1:exon

position:10679722:-1
position: 10679722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10679874:-1
position: 10679874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:10676720-10677317:-1:exon

position:10677317:-1
position: 10677317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DLGAP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: DLGAP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disks large-associated protein 2
translation: MKGLPGSRNQPPLCSGHTCGLTPPEDCEHSHSYLHRGPEARQPYLLSPAESCPMERHRCSPRASVHSDCVMLPVALGDHVSSSTFPRMHYSSHYDTRDDCAVAHAGAKTNRIPANLLDQFEKQLPLHRDGFHTLQYQRTSAAAEQRSESPGRIRHLVHSVQKLFTKSHSLEGSSKGHVNGTKGDGRADEHAHGHHSKHSKRSKSRERKAEGRHRSGLSSWWSSDDNLDSDSTYRASSVLSRHPADPTAHCYPDALASPFGDLSLRISKSNSDVKCSACEGLALAPEAKYMKRSSWSTLTVSQAKEAYRKSSLHLDKPLGPPELKPPLRPCHYLQVPQDEWGGYPTGGKDEEIPCRRTRSGSYIKAMGDEESGESDSSPKMPPKVALRPEPLLKSIGQRPPGDLQTQSYLQAASDGPAGHSLDPSANYSSPKFRSRNQSYMRAVSTLSQASCVSQMSEADVNGQLESVCESVFSEVESQAMDALDLPGGFRTRSHSYLRAIQAGYSQDDERIPMVIPSDVSSTARPSAAVSYTNYKKTPPPVPPRATSKPLISVTAQSSTESTQDAYQDSRAQRMAPWPQDGRGLYNSTDSLDSNKAMSLALETAAAQRHAAEGQGGSVRTGDKATLVSKAESFLQSRRSSIGVQDSEFPEHQPYPRSDVETATDSDTESRGLREYQSVGVQVENEKRCGRFKRSNSVTAAVQADLELEGFPGHVATEDKGLQFGSSFQRHSEPSTPTQYGAVRTVRTQGLFSYREDYRTPVDTADLPPPDPWLEPSMDAVDGGRVSPCHRDGAWFLKLLHSETKRMEGWCKEMEREAEENDLAEEILGKIRSAVGSAQLLMSQKFQQFYWLCQQNMDPSAMPRPTSQDLAGYWDMLQLSVQDVSMKFDELHQLKLSDWKELASPEMKEERKVPPPIPKKPPKGKLPITREKSLDLPDRQRQEARRRLAAAKRAASFRQSSASERADSIEIYIPEAQTRL
SIO_010081: DLGAP2
subclass of: SO_0000673
so part of: DLGAP2
location: complement(join(10677099..10677317,10679722..10679874,10685975..10686066,10695090..10695505,10697138..10697223,10703165..10703206,10704110..10704459,10725542..10725761,10730601..10730748,10759781..10759992,10772327..10773328))
location: region:10677099-10773328:-1
so has part: feature:10772327-10773328:-1:exon
so has part: feature:10759781-10759992:-1:exon
so has part: feature:10730601-10730748:-1:exon
so has part: feature:10725542-10725761:-1:exon
so has part: feature:10704110-10704459:-1:exon
so has part: feature:10703165-10703206:-1:exon
so has part: feature:10697138-10697223:-1:exon
so has part: feature:10695090-10695505:-1:exon
so has part: feature:10685975-10686066:-1:exon
so has part: feature:10679722-10679874:-1:exon
so has part: feature:10677099-10677317:-1:exon

XP_019776794.1
type: Protein
SIO_000068: ncbiprotein

position:10677099:-1
position: 10677099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10773328:-1
position: 10773328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10772327-10773328:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:10759781-10759992:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:10730601-10730748:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:10725542-10725761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:10704110-10704459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:10703165-10703206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:10697138-10697223:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:10695090-10695505:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:10685975-10686066:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:10679722-10679874:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:10677099-10677317:-1:exon

LOC117310020
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310020
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11163540..11397261)
location: region:11163540-11397261:-1
so has part: feature:11163540-11397261:-1:exon
subclass of: SO_0000011

117310020
type: Gene
SIO_000068: ncbigene

position:11163540:-1
position: 11163540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11397261:-1
position: 11397261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11163540-11397261:-1:exon

LOC117310020
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117310020
product: uncharacterized LOC117310020
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004524285.1
SIO_010081: LOC117310020
subclass of: SO_0000673
so part of: LOC117310020
location: complement(join(11163540..11163971,11232406..11232460,11305160..11305261,11397162..11397261))
location: region:11163540-11397261:-1
so has part: feature:11397162-11397261:-1:exon
so has part: feature:11305160-11305261:-1:exon
so has part: feature:11232406-11232460:-1:exon
so has part: feature:11163540-11163971:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11397162-11397261:-1:exon

position:11397162:-1
position: 11397162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11305160-11305261:-1:exon

position:11305160:-1
position: 11305160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11305261:-1
position: 11305261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11232406-11232460:-1:exon

position:11232406:-1
position: 11232406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11232460:-1
position: 11232460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11163540-11163971:-1:exon

position:11163971:-1
position: 11163971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ERICH1
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: ERICH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11404309..11518156
location: region:11404309-11518156:1
so has part: feature:11404309-11518156:1:exon
subclass of: SO_0000010

101319676
type: Gene
SIO_000068: ncbigene

position:11404309:1
position: 11404309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11518156:1
position: 11518156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11404309-11518156:1:exon

ERICH1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: ERICH1
product: glutamate rich 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004524227.1
SIO_010081: ERICH1
so part of: ERICH1
location: join(11404309..11404410,11418589..11418735,11426669..11426803,11442361..11442837,11445430..11445624,11463046..11463165,11471153..11471351,11512592..11518156)
location: region:11404309-11518156:1
so has part: feature:11404309-11404410:1:exon
so has part: feature:11418589-11418735:1:exon
so has part: feature:11426669-11426803:1:exon
so has part: feature:11442361-11442837:1:exon
so has part: feature:11445430-11445624:1:exon
so has part: feature:11463046-11463165:1:exon
so has part: feature:11471153-11471351:1:exon
so has part: feature:11512592-11518156:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11404309-11404410:1:exon

position:11404410:1
position: 11404410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11418589-11418735:1:exon

position:11418589:1
position: 11418589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11418735:1
position: 11418735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11426669-11426803:1:exon

position:11426669:1
position: 11426669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11426803:1
position: 11426803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11442361-11442837:1:exon

position:11442361:1
position: 11442361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11442837:1
position: 11442837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11445430-11445624:1:exon

position:11445430:1
position: 11445430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11445624:1
position: 11445624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11463046-11463165:1:exon

position:11463046:1
position: 11463046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11463165:1
position: 11463165
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11471153-11471351:1:exon

position:11471153:1
position: 11471153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11471351:1
position: 11471351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11512592-11518156:1:exon

position:11512592:1
position: 11512592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERICH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ERICH1
product: glutamate rich 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_019921505.2
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: join(11404309..11404410,11418589..11418735,11426669..11426803,11442361..11442837,11445430..11445624,11453837..11454989)
location: region:11404309-11454989:1
so has part: feature:11404309-11404410:1:exon
so has part: feature:11418589-11418735:1:exon
so has part: feature:11426669-11426803:1:exon
so has part: feature:11442361-11442837:1:exon
so has part: feature:11445430-11445624:1:exon
so has part: feature:11453837-11454989:1:exon

position:11454989:1
position: 11454989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11404309-11404410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11418589-11418735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11426669-11426803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11442361-11442837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11445430-11445624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11453837-11454989:1:exon

position:11453837:1
position: 11453837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERICH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ERICH1
product: glutamate rich 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 65 samples with support for all annotated introns
transcript id: XM_019921507.2
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: join(11404309..11404410,11418589..11418735,11426669..11426803,11442361..11442837,11445430..11445624,11450396..11450930)
location: region:11404309-11450930:1
so has part: feature:11404309-11404410:1:exon
so has part: feature:11418589-11418735:1:exon
so has part: feature:11426669-11426803:1:exon
so has part: feature:11442361-11442837:1:exon
so has part: feature:11445430-11445624:1:exon
so has part: feature:11450396-11450930:1:exon

position:11450930:1
position: 11450930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11404309-11404410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11418589-11418735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11426669-11426803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11442361-11442837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11445430-11445624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11450396-11450930:1:exon

position:11450396:1
position: 11450396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERICH1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ERICH1
product: glutamate rich 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 174 samples with support for all annotated introns
transcript id: XM_019921504.1
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: join(11404309..11404410,11418589..11418735,11426669..11426803,11442361..11442837,11445430..11445624,11449365..11449835)
location: region:11404309-11449835:1
so has part: feature:11404309-11404410:1:exon
so has part: feature:11418589-11418735:1:exon
so has part: feature:11426669-11426803:1:exon
so has part: feature:11442361-11442837:1:exon
so has part: feature:11445430-11445624:1:exon
so has part: feature:11449365-11449835:1:exon

position:11449835:1
position: 11449835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11404309-11404410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11418589-11418735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11426669-11426803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11442361-11442837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11445430-11445624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11449365-11449835:1:exon

position:11449365:1
position: 11449365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ERICH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ERICH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 1 isoform X2
translation: MAALRRHVFVGKVLKKLYPEVPRGQEKRAPVSPACRNPPEKVAPERVKGGGIPPMTGGDTQVQPARRLYTVGLPPEGWVPPPPEAPSCSSPESSSSGEDIGDQDLQAQPKRRRIRKHNSKKKFKNPSNIPLEQAELEKQQSILQEKLQPHSHSHTDGPTISKNKKRKLKKKQQIKRKKAAGLLTGVSGINFMYQPEETSSEQGDVRVSDGEDGADGEGGGPDAEEEGATDAGKEDVKSTNEKADDILNFLKSTQEIYFYDGVSKDSDSAVFMETSGELFKYLETHSMPSSDVFILDHMKMLLLLQDTERLKSALEVFPEHCRMPPELLFPITVCVLKRCLLH
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: join(11404389..11404410,11418589..11418735,11426669..11426803,11442361..11442837,11445430..11445624,11453837..11453889)
location: region:11404389-11453889:1
so has part: feature:11404389-11404410:1:exon
so has part: feature:11418589-11418735:1:exon
so has part: feature:11426669-11426803:1:exon
so has part: feature:11442361-11442837:1:exon
so has part: feature:11445430-11445624:1:exon
so has part: feature:11453837-11453889:1:exon

XP_019777064.1
type: Protein
SIO_000068: ncbiprotein

position:11404389:1
position: 11404389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11453889:1
position: 11453889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11404389-11404410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11418589-11418735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11426669-11426803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11442361-11442837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11445430-11445624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11453837-11453889:1:exon

ERICH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ERICH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 1 isoform X3
translation: MAALRRHVFVGKVLKKLYPEVPRGQEKRAPVSPACRNPPEKVAPERVKGGGIPPMTGGDTQVQPARRLYTVGLPPEGWVPPPPEAPSCSSPESSSSGEDIGDQDLQAQPKRRRIRKHNSKKKFKNPSNIPLEQAELEKQQSILQEKLQPHSHSHTDGPTISKNKKRKLKKKQQIKRKKAAGLLTGVSGINFMYQPEETSSEQGDVRVSDGEDGADGEGGGPDAEEEGATDAGKEDVKSTNEKADDILNFLKSTQEIYFYDGVSKDSDSAVFMETSGELFKYLETHSMPSSDVFILDHMKMLLLLQDTERLKSALEVFPEHCRMPPG
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: join(11404389..11404410,11418589..11418735,11426669..11426803,11442361..11442837,11445430..11445624,11450396..11450400)
location: region:11404389-11450400:1
so has part: feature:11404389-11404410:1:exon
so has part: feature:11418589-11418735:1:exon
so has part: feature:11426669-11426803:1:exon
so has part: feature:11442361-11442837:1:exon
so has part: feature:11445430-11445624:1:exon
so has part: feature:11450396-11450400:1:exon

XP_019777066.1
type: Protein
SIO_000068: ncbiprotein

position:11450400:1
position: 11450400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11404389-11404410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11418589-11418735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11426669-11426803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11442361-11442837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11445430-11445624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11450396-11450400:1:exon

ERICH1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ERICH1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glutamate-rich protein 1 isoform X1
translation: MAALRRHVFVGKVLKKLYPEVPRGQEKRAPVSPACRNPPEKVAPERVKGGGIPPMTGGDTQVQPARRLYTVGLPPEGWVPPPPEAPSCSSPESSSSGEDIGDQDLQAQPKRRRIRKHNSKKKFKNPSNIPLEQAELEKQQSILQEKLQPHSHSHTDGPTISKNKKRKLKKKQQIKRKKAAGLLTGVSGINFMYQPEETSSEQGDVRVSDGEDGADGEGGGPDAEEEGATDAGKEDVKSTNEKADDILNFLKSTQEIYFYDGVSKDSDSAVFMETSGELFKYLETHSMPSSDVFILDHMKMLLLLQDTERLKSALEVFPEHCRMPPDYARVISAFFNYWITHILPEKNNE
SIO_010081: ERICH1
subclass of: SO_0000673
so part of: ERICH1
location: join(11404389..11404410,11418589..11418735,11426669..11426803,11442361..11442837,11445430..11445624,11449365..11449438)
location: region:11404389-11449438:1
so has part: feature:11404389-11404410:1:exon
so has part: feature:11418589-11418735:1:exon
so has part: feature:11426669-11426803:1:exon
so has part: feature:11442361-11442837:1:exon
so has part: feature:11445430-11445624:1:exon
so has part: feature:11449365-11449438:1:exon

XP_019777063.1
type: Protein
SIO_000068: ncbiprotein

position:11449438:1
position: 11449438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11404389-11404410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11418589-11418735:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11426669-11426803:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11442361-11442837:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11445430-11445624:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11449365-11449438:1:exon

TDRP
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: TDRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11575454..11582181
location: region:11575454-11582181:1
so has part: feature:11575454-11582181:1:exon
subclass of: SO_0000010

101337286
type: Gene
SIO_000068: ncbigene

position:11575454:1
position: 11575454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11582181:1
position: 11582181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11575454-11582181:1:exon

TDRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: TDRP
product: testis development related protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019921267.2
SIO_010081: TDRP
subclass of: SO_0000673
so part of: TDRP
location: join(11575454..11579850,11579966..11580069,11581779..11582181)
location: region:11575454-11582181:1
so has part: feature:11575454-11579850:1:exon
so has part: feature:11579966-11580069:1:exon
so has part: feature:11581779-11582181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11575454-11579850:1:exon

position:11579850:1
position: 11579850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11579966-11580069:1:exon

position:11579966:1
position: 11579966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11580069:1
position: 11580069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11581779-11582181:1:exon

position:11581779:1
position: 11581779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TDRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: TDRP
product: testis development related protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019921264.2
SIO_010081: TDRP
subclass of: SO_0000673
so part of: TDRP
location: join(11575454..11577603,11579966..11580069,11581779..11582181)
location: region:11575454-11582181:1
so has part: feature:11575454-11577603:1:exon
so has part: feature:11579966-11580069:1:exon
so has part: feature:11581779-11582181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11575454-11577603:1:exon

position:11577603:1
position: 11577603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11579966-11580069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11581779-11582181:1:exon

TDRP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: TDRP
product: testis development related protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_019921265.2
SIO_010081: TDRP
subclass of: SO_0000673
so part of: TDRP
location: join(11575454..11577229,11577508..11577603,11579966..11580069,11581779..11582181)
location: region:11575454-11582181:1
so has part: feature:11575454-11577229:1:exon
so has part: feature:11577508-11577603:1:exon
so has part: feature:11579966-11580069:1:exon
so has part: feature:11581779-11582181:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11575454-11577229:1:exon

position:11577229:1
position: 11577229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11577508-11577603:1:exon

position:11577508:1
position: 11577508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11579966-11580069:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11581779-11582181:1:exon

TDRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: TDRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis development-related protein isoform X1
translation: METSSPHTANGTCPPHSPPFQVQGASFRGWKEVTSLFNKDDEQHLLERCKSPKSRGTNLRLKEDLKTEKKSGFWDNLVLKQSTQSKKPDEIEGWEPPKLILEDVAANSGDPMSDRLSGPGWEEDARGSTKYTSLAGAGNSSRWSLRSAGKLVSIRRQSRGHLTDDWEELE
SIO_010081: TDRP
subclass of: SO_0000673
so part of: TDRP
location: join(11577541..11577603,11579966..11580069,11581779..11582124)
location: region:11577541-11582124:1
so has part: feature:11577541-11577603:1:exon
so has part: feature:11579966-11580069:1:exon
so has part: feature:11581779-11582124:1:exon

XP_019776823.1
type: Protein
SIO_000068: ncbiprotein

position:11577541:1
position: 11577541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11582124:1
position: 11582124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11577541-11577603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579966-11580069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11581779-11582124:1:exon

TDRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: TDRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis development-related protein isoform X1
translation: METSSPHTANGTCPPHSPPFQVQGASFRGWKEVTSLFNKDDEQHLLERCKSPKSRGTNLRLKEDLKTEKKSGFWDNLVLKQSTQSKKPDEIEGWEPPKLILEDVAANSGDPMSDRLSGPGWEEDARGSTKYTSLAGAGNSSRWSLRSAGKLVSIRRQSRGHLTDDWEELE
SIO_010081: TDRP
subclass of: SO_0000673
so part of: TDRP
location: join(11577541..11577603,11579966..11580069,11581779..11582124)
location: region:11577541-11582124:1
so has part: feature:11577541-11577603:1:exon
so has part: feature:11579966-11580069:1:exon
so has part: feature:11581779-11582124:1:exon

XP_019776824.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11577541-11577603:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579966-11580069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11581779-11582124:1:exon

TDRP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: TDRP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis development-related protein isoform X2
translation: MGKVAVRIRQVQGASFRGWKEVTSLFNKDDEQHLLERCKSPKSRGTNLRLKEDLKTEKKSGFWDNLVLKQSTQSKKPDEIEGWEPPKLILEDVAANSGDPMSDRLSGPGWEEDARGSTKYTSLAGAGNSSRWSLRSAGKLVSIRRQSRGHLTDDWEELE
SIO_010081: TDRP
subclass of: SO_0000673
so part of: TDRP
location: join(11579821..11579850,11579966..11580069,11581779..11582124)
location: region:11579821-11582124:1
so has part: feature:11579821-11579850:1:exon
so has part: feature:11579966-11580069:1:exon
so has part: feature:11581779-11582124:1:exon

XP_019776826.1
type: Protein
SIO_000068: ncbiprotein

position:11579821:1
position: 11579821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11579821-11579850:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11579966-11580069:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11581779-11582124:1:exon

FBXO25
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11582304..11644837)
location: region:11582304-11644837:-1
so has part: feature:11582304-11644837:-1:exon
subclass of: SO_0000010

101336625
type: Gene
SIO_000068: ncbigene

position:11582304:-1
position: 11582304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11644837:-1
position: 11644837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11582304-11644837:-1:exon

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_033848730.1
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11582304..11584006,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639090))
location: region:11582304-11639090:-1
so has part: feature:11639066-11639090:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11582304-11584006:-1:exon

position:11639090:-1
position: 11639090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639090:-1:exon

position:11639066:-1
position: 11639066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

position:11638286:-1
position: 11638286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11638426:-1
position: 11638426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

position:11620932:-1
position: 11620932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11621035:-1
position: 11621035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

position:11619955:-1
position: 11619955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11620004:-1
position: 11620004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

position:11617285:-1
position: 11617285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11617377:-1
position: 11617377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

position:11604000:-1
position: 11604000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11604093:-1
position: 11604093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

position:11602587:-1
position: 11602587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11602771:-1
position: 11602771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

position:11601345:-1
position: 11601345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11601527:-1
position: 11601527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

position:11599969:-1
position: 11599969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11600112:-1
position: 11600112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11582304-11584006:-1:exon

position:11584006:-1
position: 11584006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO25
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004524238.1
SIO_010081: FBXO25
so part of: FBXO25
location: complement(join(11582505..11584006,11594441..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639303))
location: region:11582505-11639303:-1
so has part: feature:11639066-11639303:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594441-11596579:-1:exon
so has part: feature:11582505-11584006:-1:exon

position:11582505:-1
position: 11582505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11639303:-1
position: 11639303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11594441-11596579:-1:exon

position:11594441:-1
position: 11594441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11596579:-1
position: 11596579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11582505-11584006:-1:exon

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X8
translation: MRAMPFLGQDWRSPGWSWIKTEDGWKRCEPWSEGLEGENDRCGASHGTILNSEDEEIFNNEEHEYASKKRKKDHFRNDKNTQCFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEQVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKISVIYVHIPTPVWF
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11583962..11584006,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639067))
location: region:11583962-11639067:-1
so has part: feature:11639066-11639067:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11583962-11584006:-1:exon

XP_033704621.1
type: Protein
SIO_000068: ncbiprotein

position:11583962:-1
position: 11583962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11639067:-1
position: 11639067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11583962-11584006:-1:exon

FBXO25
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004524239.1
SIO_010081: FBXO25
so part of: FBXO25
location: complement(join(11587780..11588396,11594441..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639303))
location: region:11587780-11639303:-1
so has part: feature:11639066-11639303:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594441-11596579:-1:exon
so has part: feature:11587780-11588396:-1:exon

position:11587780:-1
position: 11587780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11594441-11596579:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11587780-11588396:-1:exon

position:11588396:-1
position: 11588396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO25
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_004524237.1
SIO_010081: FBXO25
so part of: FBXO25
location: complement(join(11589591..11589989,11594441..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639303))
location: region:11589591-11639303:-1
so has part: feature:11639066-11639303:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594441-11596579:-1:exon
so has part: feature:11589591-11589989:-1:exon

position:11589591:-1
position: 11589591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11594441-11596579:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11589591-11589989:-1:exon

position:11589989:-1
position: 11589989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 104 samples with support for all annotated introns
transcript id: XM_019921247.2
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11594576..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11644708..11644837))
location: region:11594576-11644837:-1
so has part: feature:11644708-11644837:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594576-11596579:-1:exon

position:11594576:-1
position: 11594576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11644708-11644837:-1:exon

position:11644708:-1
position: 11644708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11594576-11596579:-1:exon

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033848728.1
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11594576..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11638286..11638426,11639066..11639307))
location: region:11594576-11639307:-1
so has part: feature:11639066-11639307:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594576-11596579:-1:exon

position:11639307:-1
position: 11639307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11594576-11596579:-1:exon

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_019921246.2
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11594576..11596579,11599969..11600112,11601345..11601524,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639306))
location: region:11594576-11639306:-1
so has part: feature:11639066-11639306:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601524:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594576-11596579:-1:exon

position:11639306:-1
position: 11639306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639306:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601524:-1:exon

position:11601524:-1
position: 11601524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11594576-11596579:-1:exon

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019921254.2
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11594576..11595957,11599969..11600112,11601345..11601524,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639090))
location: region:11594576-11639090:-1
so has part: feature:11639066-11639090:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601524:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594576-11595957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11594576-11595957:-1:exon

position:11595957:-1
position: 11595957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_019921253.2
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11594576..11595957,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639090))
location: region:11594576-11639090:-1
so has part: feature:11639066-11639090:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11594576-11595957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11594576-11595957:-1:exon

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_033848729.1
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11594576..11595957,11596553..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639090))
location: region:11594576-11639090:-1
so has part: feature:11639066-11639090:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11596553-11596579:-1:exon
so has part: feature:11594576-11595957:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11596553-11596579:-1:exon

position:11596553:-1
position: 11596553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11594576-11595957:-1:exon

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X7
translation: MRAMPFLGQDWRSPGWSWIKTEDGWKRCEPWSEGLEGENDRCGASHGTILNSEDEEIFNNEEHEYASKKRKKDHFRNDKNTQCFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11595868..11595957,11599969..11600112,11601345..11601524,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639067))
location: region:11595868-11639067:-1
so has part: feature:11639066-11639067:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601524:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11595868-11595957:-1:exon

XP_019776813.1
type: Protein
SIO_000068: ncbiprotein

position:11595868:-1
position: 11595868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11595868-11595957:-1:exon

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X6
translation: MRAMPFLGQDWRSPGWSWIKTEDGWKRCEPWSEGLEGENDRCGASHGTILNSEDEEIFNNEEHEYASKKRKKDHFRNDKNTQCFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEQVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKDSGHPCTAADPDSCFTPVSPQHFIDLFKF
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11595868..11595957,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639067))
location: region:11595868-11639067:-1
so has part: feature:11639066-11639067:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11595868-11595957:-1:exon

XP_019776812.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11595868-11595957:-1:exon

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X5
translation: MRAMPFLGQDWRSPGWSWIKTEDGWKRCEPWSEGLEGENDRCGASHGTILNSEDEEIFNNEEHEYASKKRKKDHFRNDKNTQCFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEQVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKDCRLALLLEDSGHPCTAADPDSCFTPVSPQHFIDLFKF
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11595868..11595957,11596553..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639067))
location: region:11595868-11639067:-1
so has part: feature:11639066-11639067:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11596553-11596579:-1:exon
so has part: feature:11595868-11595957:-1:exon

XP_033704620.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11596553-11596579:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11595868-11595957:-1:exon

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X1
translation: MRAMPFLGQDWRSPGWSWIKTEDGWKRCEPWSEGLEGENDRCGASHGTILNSEDEEIFNNEEHEYASKKRKKDHFRNDKNTQCFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKDCRLALLLEVPPALPASARVPRRLVPLRPHPLLMCDWPACFATTRGPMSCPVDQREGVDLATGSPALLAPSPEAALSPDLSPVSAAGRSAGPSGEWGGRCREQVPGWTLTHGGRGGVWPGRGRRAQGSLWGPNSGEPVSPSTGAGIPSGSLYPGEPCGCLHFRSSHRLLSTHLCGGVRGAFKQAAGDF
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11596013..11596579,11599969..11600112,11601345..11601524,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639067))
location: region:11596013-11639067:-1
so has part: feature:11639066-11639067:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601524:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11596013-11596579:-1:exon

XP_019776805.1
type: Protein
SIO_000068: ncbiprotein

position:11596013:-1
position: 11596013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601524:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11596013-11596579:-1:exon

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X2
translation: MPFLGQDWRSPGWSWIKTEDGWKRCEPWSEGLEGENDRCGASHGTILNSEDEEIFNNEEHEYASKKRKKDHFRNDKNTQCFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEQVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKDCRLALLLEVPPALPASARVPRRLVPLRPHPLLMCDWPACFATTRGPMSCPVDQREGVDLATGSPALLAPSPEAALSPDLSPVSAAGRSAGPSGEWGGRCREQVPGWTLTHGGRGGVWPGRGRRAQGSLWGPNSGEPVSPSTGAGIPSGSLYPGEPCGCLHFRSSHRLLSTHLCGGVRGAFKQAAGDF
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11596013..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638419))
location: region:11596013-11638419:-1
so has part: feature:11638286-11638419:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11596013-11596579:-1:exon

XP_019776806.1
type: Protein
SIO_000068: ncbiprotein

position:11638419:-1
position: 11638419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11638286-11638419:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11596013-11596579:-1:exon

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X3
translation: MTGVAPATARFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEQVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKDCRLALLLEVPPALPASARVPRRLVPLRPHPLLMCDWPACFATTRGPMSCPVDQREGVDLATGSPALLAPSPEAALSPDLSPVSAAGRSAGPSGEWGGRCREQVPGWTLTHGGRGGVWPGRGRRAQGSLWGPNSGEPVSPSTGAGIPSGSLYPGEPCGCLHFRSSHRLLSTHLCGGVRGAFKQAAGDF
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11596013..11596579,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11638286..11638313))
location: region:11596013-11638313:-1
so has part: feature:11638286-11638313:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11596013-11596579:-1:exon

XP_033704619.1
type: Protein
SIO_000068: ncbiprotein

position:11638313:-1
position: 11638313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11638286-11638313:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11596013-11596579:-1:exon

FBXO25
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: FBXO25
product: F-box protein 25, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019921249.2
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11598796..11599012,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639090))
location: region:11598796-11639090:-1
so has part: feature:11639066-11639090:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11598796-11599012:-1:exon

position:11598796:-1
position: 11598796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11598796-11599012:-1:exon

position:11599012:-1
position: 11599012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FBXO25
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: FBXO25
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box only protein 25 isoform X4
translation: MRAMPFLGQDWRSPGWSWIKTEDGWKRCEPWSEGLEGENDRCGASHGTILNSEDEEIFNNEEHEYASKKRKKDHFRNDKNTQCFYREKWIYVHKESTRERHGYCTLGEAFNRLDFFSAVQDARRFTYVARLLQLIAKSQLTSLSGVAQKNYFNVLDKIVQKVLDDHQNPRLIKDLLQDLSSTLCILIRGVGKSVLVGNINIWVCRLETILNWQQQLQNLQMTEQVDSGLTLSDLPVHMLSNILYRFSDGWDIVTLGQVTPTLSALSEDRRLWKKLCQYHFGEKQFCRHLILSEKGHIEWKLMYFALQKHYPTKEQYGDTLHFCRHCSILFWKIISVVMWLFFNYNPWLWGESPCVNRALPPGLQASRSCCPHS
SIO_010081: FBXO25
subclass of: SO_0000673
so part of: FBXO25
location: complement(join(11598887..11599012,11599969..11600112,11601345..11601527,11602587..11602771,11604000..11604093,11617285..11617377,11619955..11620004,11620932..11621035,11638286..11638426,11639066..11639067))
location: region:11598887-11639067:-1
so has part: feature:11639066-11639067:-1:exon
so has part: feature:11638286-11638426:-1:exon
so has part: feature:11620932-11621035:-1:exon
so has part: feature:11619955-11620004:-1:exon
so has part: feature:11617285-11617377:-1:exon
so has part: feature:11604000-11604093:-1:exon
so has part: feature:11602587-11602771:-1:exon
so has part: feature:11601345-11601527:-1:exon
so has part: feature:11599969-11600112:-1:exon
so has part: feature:11598887-11599012:-1:exon

XP_019776808.1
type: Protein
SIO_000068: ncbiprotein

position:11598887:-1
position: 11598887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11639066-11639067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11638286-11638426:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11620932-11621035:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11619955-11620004:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11617285-11617377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11604000-11604093:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11602587-11602771:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11601345-11601527:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11599969-11600112:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11598887-11599012:-1:exon

LOC109547641
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC109547641
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11646440..11719149)
location: region:11646440-11719149:-1
so has part: feature:11646440-11719149:-1:exon
subclass of: SO_0000011

109547641
type: Gene
SIO_000068: ncbigene

position:11646440:-1
position: 11646440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11719149:-1
position: 11719149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11646440-11719149:-1:exon

LOC109547641
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547641
product: uncharacterized LOC109547641, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_004524242.1
SIO_010081: LOC109547641
subclass of: SO_0000673
so part of: LOC109547641
location: complement(join(11646440..11646761,11646895..11647011,11651675..11651799,11655563..11660962,11666368..11666806,11667635..11667860,11701188..11701418,11716554..11719149))
location: region:11646440-11719149:-1
so has part: feature:11716554-11719149:-1:exon
so has part: feature:11701188-11701418:-1:exon
so has part: feature:11667635-11667860:-1:exon
so has part: feature:11666368-11666806:-1:exon
so has part: feature:11655563-11660962:-1:exon
so has part: feature:11651675-11651799:-1:exon
so has part: feature:11646895-11647011:-1:exon
so has part: feature:11646440-11646761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11716554-11719149:-1:exon

position:11716554:-1
position: 11716554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11701188-11701418:-1:exon

position:11701188:-1
position: 11701188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11701418:-1
position: 11701418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11667635-11667860:-1:exon

position:11667635:-1
position: 11667635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11667860:-1
position: 11667860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11666368-11666806:-1:exon

position:11666368:-1
position: 11666368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11666806:-1
position: 11666806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11655563-11660962:-1:exon

position:11655563:-1
position: 11655563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11660962:-1
position: 11660962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11651675-11651799:-1:exon

position:11651675:-1
position: 11651675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11651799:-1
position: 11651799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11646895-11647011:-1:exon

position:11646895:-1
position: 11646895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11647011:-1
position: 11647011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11646440-11646761:-1:exon

position:11646761:-1
position: 11646761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109547641
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547641
product: uncharacterized LOC109547641, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004524243.1
SIO_010081: LOC109547641
subclass of: SO_0000673
so part of: LOC109547641
location: complement(join(11646440..11646765,11651675..11651799,11655563..11660962,11666368..11666806,11667635..11667860,11701188..11701418,11716554..11719148))
location: region:11646440-11719148:-1
so has part: feature:11716554-11719148:-1:exon
so has part: feature:11701188-11701418:-1:exon
so has part: feature:11667635-11667860:-1:exon
so has part: feature:11666368-11666806:-1:exon
so has part: feature:11655563-11660962:-1:exon
so has part: feature:11651675-11651799:-1:exon
so has part: feature:11646440-11646765:-1:exon

position:11719148:-1
position: 11719148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11716554-11719148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11701188-11701418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11667635-11667860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11666368-11666806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11655563-11660962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11651675-11651799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11646440-11646765:-1:exon

position:11646765:-1
position: 11646765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109547641
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547641
product: uncharacterized LOC109547641, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004524241.1
SIO_010081: LOC109547641
subclass of: SO_0000673
so part of: LOC109547641
location: complement(join(11646440..11646765,11646895..11647011,11651675..11651799,11655563..11660962,11666368..11666806,11667635..11667860,11701188..11701418,11716554..11719148))
location: region:11646440-11719148:-1
so has part: feature:11716554-11719148:-1:exon
so has part: feature:11701188-11701418:-1:exon
so has part: feature:11667635-11667860:-1:exon
so has part: feature:11666368-11666806:-1:exon
so has part: feature:11655563-11660962:-1:exon
so has part: feature:11651675-11651799:-1:exon
so has part: feature:11646895-11647011:-1:exon
so has part: feature:11646440-11646765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11716554-11719148:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11701188-11701418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11667635-11667860:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11666368-11666806:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11655563-11660962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11651675-11651799:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11646895-11647011:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11646440-11646765:-1:exon

ZNF596
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: ZNF596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11750677..11764398)
location: region:11750677-11764398:-1
so has part: feature:11750677-11764398:-1:exon
subclass of: SO_0000010

101333501
type: Gene
SIO_000068: ncbigene

position:11750677:-1
position: 11750677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11764398:-1
position: 11764398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11750677-11764398:-1:exon

ZNF596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ZNF596
product: zinc finger protein 596, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033848749.1
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750677..11752213,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756234,11757777..11758009,11764367..11764398))
location: region:11750677-11764398:-1
so has part: feature:11764367-11764398:-1:exon
so has part: feature:11757777-11758009:-1:exon
so has part: feature:11756152-11756234:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750677-11752213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11764367-11764398:-1:exon

position:11764367:-1
position: 11764367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11757777-11758009:-1:exon

position:11757777:-1
position: 11757777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11758009:-1
position: 11758009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11756152-11756234:-1:exon

position:11756152:-1
position: 11756152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11756234:-1
position: 11756234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11754471-11754597:-1:exon

position:11754471:-1
position: 11754471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11754597:-1
position: 11754597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11753656-11753751:-1:exon

position:11753656:-1
position: 11753656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11753751:-1
position: 11753751
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11752688-11752779:-1:exon

position:11752688:-1
position: 11752688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11752779:-1
position: 11752779
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11750677-11752213:-1:exon

position:11752213:-1
position: 11752213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ZNF596
product: zinc finger protein 596, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019921517.2
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750677..11752210,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756234,11757777..11758009,11762600..11763303))
location: region:11750677-11763303:-1
so has part: feature:11762600-11763303:-1:exon
so has part: feature:11757777-11758009:-1:exon
so has part: feature:11756152-11756234:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750677-11752210:-1:exon

position:11763303:-1
position: 11763303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11762600-11763303:-1:exon

position:11762600:-1
position: 11762600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11757777-11758009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11756152-11756234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11754471-11754597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11750677-11752210:-1:exon

position:11752210:-1
position: 11752210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ZNF596
product: zinc finger protein 596, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_019921516.2
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750677..11752213,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756234,11757777..11758009,11762600..11763303))
location: region:11750677-11763303:-1
so has part: feature:11762600-11763303:-1:exon
so has part: feature:11757777-11758009:-1:exon
so has part: feature:11756152-11756234:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750677-11752213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11762600-11763303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11757777-11758009:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11756152-11756234:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11754471-11754597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11750677-11752213:-1:exon

ZNF596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ZNF596
product: zinc finger protein 596, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_033848750.1
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750677..11752213,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756234,11756628..11757255))
location: region:11750677-11757255:-1
so has part: feature:11756628-11757255:-1:exon
so has part: feature:11756152-11756234:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750677-11752213:-1:exon

position:11757255:-1
position: 11757255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11756628-11757255:-1:exon

position:11756628:-1
position: 11756628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11756152-11756234:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11754471-11754597:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11750677-11752213:-1:exon

ZNF596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ZNF596
product: zinc finger protein 596, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 169 samples with support for all annotated introns
transcript id: XM_033848751.1
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750677..11752213,11752688..11752779,11753656..11753751,11754471..11754616))
location: region:11750677-11754616:-1
so has part: feature:11754471-11754616:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750677-11752213:-1:exon

position:11754616:-1
position: 11754616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11754471-11754616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11750677-11752213:-1:exon

ZNF596
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: ZNF596
product: zinc finger protein 596, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_019921518.2
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750677..11752213,11752688..11752903,11753656..11753751))
location: region:11750677-11753751:-1
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752903:-1:exon
so has part: feature:11750677-11752213:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11752688-11752903:-1:exon

position:11752903:-1
position: 11752903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11750677-11752213:-1:exon

ZNF596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ZNF596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596 isoform X2
translation: MESQESVTFKDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVSVGNQLYKSDVISHLEQGEQLSREELGFLQGQSPVISGREDDLRKQEMISMQHIYKKDTSVISAMRSHSQEDLLECNDFREKFTEILTLTQYVIPQVGKKPFFSQDFGKAISYLSSFNIHKQIHARSKSYECHQRTNAFIQSSALRQHDNTQTGEKTFECHVCRKAFSKSSNLRRHEMIHTGVKPHGCHLCGKSFTHCSDLRKHERIHTGEKLYGCHLCGKAFSKSYNLRRHEMIHTREKPNECHLCGKAFTHCSDLRKHERTHFGEKPYGCHLCGKTFSKTSYLRQHERTHNGEKPYECHLCGKAFTHCSHLRKHERTHTGEKPYECHLCGKAFTESSVLRRHERTHTGEKPYECHLCWKAFTDSSVLKRHERTHTGEKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECNICGKAFNRSYNFRLHKRIHTGEKPHKCYLCGKAFSKYFNLRQHERTHAVKVVNVEDSPPIASKYKHYCGLAQ
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750948..11752210,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756163))
location: region:11750948-11756163:-1
so has part: feature:11756152-11756163:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750948-11752210:-1:exon

XP_019777076.2
type: Protein
SIO_000068: ncbiprotein

position:11750948:-1
position: 11750948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11756163:-1
position: 11756163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11756152-11756163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11754471-11754597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11750948-11752210:-1:exon

ZNF596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ZNF596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596 isoform X1
translation: MESQESVTFKDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVSVGNQLYKSDVISHLEQGEQLSREELGFLQGQSPVISGREDDLRKQEMISMQHIYKKDTSVISAMQRSHSQEDLLECNDFREKFTEILTLTQYVIPQVGKKPFFSQDFGKAISYLSSFNIHKQIHARSKSYECHQRTNAFIQSSALRQHDNTQTGEKTFECHVCRKAFSKSSNLRRHEMIHTGVKPHGCHLCGKSFTHCSDLRKHERIHTGEKLYGCHLCGKAFSKSYNLRRHEMIHTREKPNECHLCGKAFTHCSDLRKHERTHFGEKPYGCHLCGKTFSKTSYLRQHERTHNGEKPYECHLCGKAFTHCSHLRKHERTHTGEKPYECHLCGKAFTESSVLRRHERTHTGEKPYECHLCWKAFTDSSVLKRHERTHTGEKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECNICGKAFNRSYNFRLHKRIHTGEKPHKCYLCGKAFSKYFNLRQHERTHAVKVVNVEDSPPIASKYKHYCGLAQ
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750948..11752213,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756163))
location: region:11750948-11756163:-1
so has part: feature:11756152-11756163:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750948-11752213:-1:exon

XP_019777075.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11756152-11756163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11754471-11754597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11750948-11752213:-1:exon

ZNF596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ZNF596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596 isoform X1
translation: MESQESVTFKDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVSVGNQLYKSDVISHLEQGEQLSREELGFLQGQSPVISGREDDLRKQEMISMQHIYKKDTSVISAMQRSHSQEDLLECNDFREKFTEILTLTQYVIPQVGKKPFFSQDFGKAISYLSSFNIHKQIHARSKSYECHQRTNAFIQSSALRQHDNTQTGEKTFECHVCRKAFSKSSNLRRHEMIHTGVKPHGCHLCGKSFTHCSDLRKHERIHTGEKLYGCHLCGKAFSKSYNLRRHEMIHTREKPNECHLCGKAFTHCSDLRKHERTHFGEKPYGCHLCGKTFSKTSYLRQHERTHNGEKPYECHLCGKAFTHCSHLRKHERTHTGEKPYECHLCGKAFTESSVLRRHERTHTGEKPYECHLCWKAFTDSSVLKRHERTHTGEKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECNICGKAFNRSYNFRLHKRIHTGEKPHKCYLCGKAFSKYFNLRQHERTHAVKVVNVEDSPPIASKYKHYCGLAQ
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750948..11752213,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756163))
location: region:11750948-11756163:-1
so has part: feature:11756152-11756163:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750948-11752213:-1:exon

XP_033704640.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11756152-11756163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11754471-11754597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11750948-11752213:-1:exon

ZNF596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ZNF596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596 isoform X1
translation: MESQESVTFKDVAVDFTQEEWALLDTSQRKLFRDVMLENISHLVSVGNQLYKSDVISHLEQGEQLSREELGFLQGQSPVISGREDDLRKQEMISMQHIYKKDTSVISAMQRSHSQEDLLECNDFREKFTEILTLTQYVIPQVGKKPFFSQDFGKAISYLSSFNIHKQIHARSKSYECHQRTNAFIQSSALRQHDNTQTGEKTFECHVCRKAFSKSSNLRRHEMIHTGVKPHGCHLCGKSFTHCSDLRKHERIHTGEKLYGCHLCGKAFSKSYNLRRHEMIHTREKPNECHLCGKAFTHCSDLRKHERTHFGEKPYGCHLCGKTFSKTSYLRQHERTHNGEKPYECHLCGKAFTHCSHLRKHERTHTGEKPYECHLCGKAFTESSVLRRHERTHTGEKPYECHLCWKAFTDSSVLKRHERTHTGEKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECNICGKAFNRSYNFRLHKRIHTGEKPHKCYLCGKAFSKYFNLRQHERTHAVKVVNVEDSPPIASKYKHYCGLAQ
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750948..11752213,11752688..11752779,11753656..11753751,11754471..11754597,11756152..11756163))
location: region:11750948-11756163:-1
so has part: feature:11756152-11756163:-1:exon
so has part: feature:11754471-11754597:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750948-11752213:-1:exon

XP_033704641.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11756152-11756163:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11754471-11754597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11750948-11752213:-1:exon

ZNF596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ZNF596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596 isoform X3
translation: MLENISHLVSVGNQLYKSDVISHLEQGEQLSREELGFLQGQSPVISGREDDLRKQEMISMQHIYKKDTSVISAMQRSHSQEDLLECNDFREKFTEILTLTQYVIPQVGKKPFFSQDFGKAISYLSSFNIHKQIHARSKSYECHQRTNAFIQSSALRQHDNTQTGEKTFECHVCRKAFSKSSNLRRHEMIHTGVKPHGCHLCGKSFTHCSDLRKHERIHTGEKLYGCHLCGKAFSKSYNLRRHEMIHTREKPNECHLCGKAFTHCSDLRKHERTHFGEKPYGCHLCGKTFSKTSYLRQHERTHNGEKPYECHLCGKAFTHCSHLRKHERTHTGEKPYECHLCGKAFTESSVLRRHERTHTGEKPYECHLCWKAFTDSSVLKRHERTHTGEKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECNICGKAFNRSYNFRLHKRIHTGEKPHKCYLCGKAFSKYFNLRQHERTHAVKVVNVEDSPPIASKYKHYCGLAQ
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750948..11752213,11752688..11752779,11753656..11753751,11754471..11754504))
location: region:11750948-11754504:-1
so has part: feature:11754471-11754504:-1:exon
so has part: feature:11753656-11753751:-1:exon
so has part: feature:11752688-11752779:-1:exon
so has part: feature:11750948-11752213:-1:exon

XP_033704642.1
type: Protein
SIO_000068: ncbiprotein

position:11754504:-1
position: 11754504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11754471-11754504:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11753656-11753751:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11752688-11752779:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11750948-11752213:-1:exon

ZNF596
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: ZNF596
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 596 isoform X4
translation: MISMQHIYKKDTSVISAMQRSHSQEDLLECNDFREKFTEILTLTQYVIPQVGKKPFFSQDFGKAISYLSSFNIHKQIHARSKSYECHQRTNAFIQSSALRQHDNTQTGEKTFECHVCRKAFSKSSNLRRHEMIHTGVKPHGCHLCGKSFTHCSDLRKHERIHTGEKLYGCHLCGKAFSKSYNLRRHEMIHTREKPNECHLCGKAFTHCSDLRKHERTHFGEKPYGCHLCGKTFSKTSYLRQHERTHNGEKPYECHLCGKAFTHCSHLRKHERTHTGEKPYECHLCGKAFTESSVLRRHERTHTGEKPYECHLCWKAFTDSSVLKRHERTHTGEKPYECHLCGKAFNHSSVLRRHERTHTGEKPYECNICGKAFNRSYNFRLHKRIHTGEKPHKCYLCGKAFSKYFNLRQHERTHAVKVVNVEDSPPIASKYKHYCGLAQ
SIO_010081: ZNF596
subclass of: SO_0000673
so part of: ZNF596
location: complement(join(11750948..11752213,11752688..11752741))
location: region:11750948-11752741:-1
so has part: feature:11752688-11752741:-1:exon
so has part: feature:11750948-11752213:-1:exon

XP_019777077.1
type: Protein
SIO_000068: ncbiprotein

position:11752741:-1
position: 11752741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11752688-11752741:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11750948-11752213:-1:exon

LOC117309975
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117309975
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11778591..11780905
location: region:11778591-11780905:1
so has part: feature:11778591-11780905:1:exon
subclass of: SO_0000011

117309975
type: Gene
SIO_000068: ncbigene

position:11778591:1
position: 11778591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11780905:1
position: 11780905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11778591-11780905:1:exon

LOC117309975
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117309975
product: uncharacterized LOC117309975
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_004524249.1
SIO_010081: LOC117309975
subclass of: SO_0000673
so part of: LOC117309975
location: join(11778591..11778746,11779816..11779933,11780667..11780905)
location: region:11778591-11780905:1
so has part: feature:11778591-11778746:1:exon
so has part: feature:11779816-11779933:1:exon
so has part: feature:11780667-11780905:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11778591-11778746:1:exon

position:11778746:1
position: 11778746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11779816-11779933:1:exon

position:11779816:1
position: 11779816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11779933:1
position: 11779933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11780667-11780905:1:exon

position:11780667:1
position: 11780667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117310018
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC117310018
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11847324..11861506)
location: region:11847324-11861506:-1
so has part: feature:11847324-11861506:-1:exon
subclass of: SO_0000011

117310018
type: Gene
SIO_000068: ncbigene

position:11847324:-1
position: 11847324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11861506:-1
position: 11861506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11847324-11861506:-1:exon

LOC117310018
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC117310018
product: uncharacterized LOC117310018
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004524282.1
SIO_010081: LOC117310018
subclass of: SO_0000673
so part of: LOC117310018
location: complement(join(11847324..11847437,11848525..11848645,11859675..11859805,11860191..11861506))
location: region:11847324-11861506:-1
so has part: feature:11860191-11861506:-1:exon
so has part: feature:11859675-11859805:-1:exon
so has part: feature:11848525-11848645:-1:exon
so has part: feature:11847324-11847437:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11860191-11861506:-1:exon

position:11860191:-1
position: 11860191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11859675-11859805:-1:exon

position:11859675:-1
position: 11859675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11859805:-1
position: 11859805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11848525-11848645:-1:exon

position:11848525:-1
position: 11848525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11848645:-1
position: 11848645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11847324-11847437:-1:exon

position:11847437:-1
position: 11847437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

WWC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: WWC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11861675..12027837
location: region:11861675-12027837:1
so has part: feature:11861675-12027837:1:exon
subclass of: SO_0000010

101338407
type: Gene
SIO_000068: ncbigene

position:11861675:1
position: 11861675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12027837:1
position: 12027837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11861675-12027837:1:exon

WWC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: WWC2
product: WW and C2 domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_019921372.2
SIO_010081: WWC2
subclass of: SO_0000673
so part of: WWC2
location: join(11861675..11862151,11948184..11948293,11958929..11959132,11959895..11959971,11976670..11976749,11981368..11981497,11984519..11984665,11985697..11985770,11989692..11989934,11995669..11995758,11996829..11997451,12000638..12000767,12001493..12001573,12001667..12001753,12004043..12004235,12005451..12005615,12009041..12009162,12011012..12011210,12012773..12012937,12014564..12014656,12017654..12017896,12021986..12022113,12025063..12027837)
location: region:11861675-12027837:1
so has part: feature:11861675-11862151:1:exon
so has part: feature:11948184-11948293:1:exon
so has part: feature:11958929-11959132:1:exon
so has part: feature:11959895-11959971:1:exon
so has part: feature:11976670-11976749:1:exon
so has part: feature:11981368-11981497:1:exon
so has part: feature:11984519-11984665:1:exon
so has part: feature:11985697-11985770:1:exon
so has part: feature:11989692-11989934:1:exon
so has part: feature:11995669-11995758:1:exon
so has part: feature:11996829-11997451:1:exon
so has part: feature:12000638-12000767:1:exon
so has part: feature:12001493-12001573:1:exon
so has part: feature:12001667-12001753:1:exon
so has part: feature:12004043-12004235:1:exon
so has part: feature:12005451-12005615:1:exon
so has part: feature:12009041-12009162:1:exon
so has part: feature:12011012-12011210:1:exon
so has part: feature:12012773-12012937:1:exon
so has part: feature:12014564-12014656:1:exon
so has part: feature:12017654-12017896:1:exon
so has part: feature:12021986-12022113:1:exon
so has part: feature:12025063-12027837:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11861675-11862151:1:exon

position:11862151:1
position: 11862151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11948184-11948293:1:exon

position:11948184:1
position: 11948184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11948293:1
position: 11948293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11958929-11959132:1:exon

position:11958929:1
position: 11958929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11959132:1
position: 11959132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11959895-11959971:1:exon

position:11959895:1
position: 11959895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11959971:1
position: 11959971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:11976670-11976749:1:exon

position:11976670:1
position: 11976670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11976749:1
position: 11976749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:11981368-11981497:1:exon

position:11981368:1
position: 11981368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11981497:1
position: 11981497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:11984519-11984665:1:exon

position:11984519:1
position: 11984519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11984665:1
position: 11984665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:11985697-11985770:1:exon

position:11985697:1
position: 11985697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11985770:1
position: 11985770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:11989692-11989934:1:exon

position:11989692:1
position: 11989692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11989934:1
position: 11989934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:11995669-11995758:1:exon

position:11995669:1
position: 11995669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11995758:1
position: 11995758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:11996829-11997451:1:exon

position:11996829:1
position: 11996829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11997451:1
position: 11997451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12000638-12000767:1:exon

position:12000638:1
position: 12000638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12000767:1
position: 12000767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12001493-12001573:1:exon

position:12001493:1
position: 12001493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12001573:1
position: 12001573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12001667-12001753:1:exon

position:12001667:1
position: 12001667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12001753:1
position: 12001753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12004043-12004235:1:exon

position:12004043:1
position: 12004043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12004235:1
position: 12004235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12005451-12005615:1:exon

position:12005451:1
position: 12005451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12005615:1
position: 12005615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:12009041-12009162:1:exon

position:12009041:1
position: 12009041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12009162:1
position: 12009162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:12011012-12011210:1:exon

position:12011012:1
position: 12011012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12011210:1
position: 12011210
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:12012773-12012937:1:exon

position:12012773:1
position: 12012773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12012937:1
position: 12012937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:12014564-12014656:1:exon

position:12014564:1
position: 12014564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12014656:1
position: 12014656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:12017654-12017896:1:exon

position:12017654:1
position: 12017654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12017896:1
position: 12017896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:12021986-12022113:1:exon

position:12021986:1
position: 12021986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12022113:1
position: 12022113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:12025063-12027837:1:exon

position:12025063:1
position: 12025063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WWC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: WWC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein WWC2 isoform X1
translation: MPRRAGSGQLPLPRGWEEARDYDGKVFYIDHNTRRTSWIDPRDRLTKPLSFADCVGDELPWGWEAGFDPQIGVYYIDHINKTTQIEDPRKQWRGEQEKMLKDYLSVAQDALRTQKELYHVKEQRLALALDEYVRLNDAYKEKSSSRTSLFSGSSSSTKYDPDILKAEISTTRLRVKKLKRELSQMKQELLYKEQGFATLKQIDKKMSGGQSGYELSEAKAILTELKSIRKAISSGEKEKQDLMQSLAKLQERFHLDQSIGRSEPDLRSSPVNSHLSLSRQTLDAGSQTSISGDIGVRSRSNLAEKVRLSLQYEEAKRSMANLKIELSKLDSEAWPGALDIEKEKLMLINEKEELLKELQFVTPEKRTPDELESLGAERQRLEKELLSVRGAPSRALAERLKLEERRKELLQKLEETTKLTTYLHSQLKNLSASTLSMSSGSSLGSLASSRGSLNTSSRGSLNSLSSSELYYTSQGDQLDPDYQYKLDFLLQEKGGYIPSGPITTIHEHEVAKSPSQPGRSGPCVAAAAAPGRAPALPEAPTSVASLSSRSSLSSLSPPGSPLVSEGTFPLSPHDVVPLHHFSADLEDCELSSHFADIGLGEDQPLLDSDPGGAPPSLSEDKDLTERARALPHEGPADVEKSLPKRRGIHLLGEKTTCVSAAVSDESVAGDSGVYEAFVKQPSEVEDVLYSEEDVAVTETAQVQIGLRYDAKRSSFMVIVAQLRNLHAFLIPHTSKVYFRVALLPSSTDVSCLFRTKVHPAAESLLFGDVFRVAISQTALQQKTLRVDLCSVSQHQREECLAGTQISLADLPFSNEIFTLWYNLLPSKQMPCKKNEDETEDSVFQPSQPLVDSIDLDAVSALLARTSAELLAVEQELAQEEEEPEQEEEQRGPDGDWLTMQREASDEIVAEEGAEVKLAEGSCCAEDVSSRPSVPEVNEDTSKTENNCANDLGSQPPAGVPALVDKETNTDEAGSAGVAVRPKDRSGLSARQRPFVRSSVIVRSQTFSPGERSQYVCRLNRSDSDSSTLAKKSLFVRNSTERRSLRVKRTVCQPVLRRAAPECPVRTSLDLELDLQASLTRQSRLNDELQALRGLRQKLEDLKAQGETDLPPGVLEDERFQKLLRQAEKQAEQSKEEQKQDLNAEKLMRQVSKDVCRLREQSRKVPRQVQSFREKIAYFTRAKISIPSLPADDV
SIO_010081: WWC2
subclass of: SO_0000673
so part of: WWC2
location: join(11862021..11862151,11948184..11948293,11958929..11959132,11959895..11959971,11976670..11976749,11981368..11981497,11984519..11984665,11985697..11985770,11989692..11989934,11995669..11995758,11996829..11997451,12000638..12000767,12001493..12001573,12001667..12001753,12004043..12004235,12005451..12005615,12009041..12009162,12011012..12011210,12012773..12012937,12014564..12014656,12017654..12017896,12021986..12022113,12025063..12025129)
location: region:11862021-12025129:1
so has part: feature:11862021-11862151:1:exon
so has part: feature:11948184-11948293:1:exon
so has part: feature:11958929-11959132:1:exon
so has part: feature:11959895-11959971:1:exon
so has part: feature:11976670-11976749:1:exon
so has part: feature:11981368-11981497:1:exon
so has part: feature:11984519-11984665:1:exon
so has part: feature:11985697-11985770:1:exon
so has part: feature:11989692-11989934:1:exon
so has part: feature:11995669-11995758:1:exon
so has part: feature:11996829-11997451:1:exon
so has part: feature:12000638-12000767:1:exon
so has part: feature:12001493-12001573:1:exon
so has part: feature:12001667-12001753:1:exon
so has part: feature:12004043-12004235:1:exon
so has part: feature:12005451-12005615:1:exon
so has part: feature:12009041-12009162:1:exon
so has part: feature:12011012-12011210:1:exon
so has part: feature:12012773-12012937:1:exon
so has part: feature:12014564-12014656:1:exon
so has part: feature:12017654-12017896:1:exon
so has part: feature:12021986-12022113:1:exon
so has part: feature:12025063-12025129:1:exon

XP_019776931.1
type: Protein
SIO_000068: ncbiprotein

position:11862021:1
position: 11862021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12025129:1
position: 12025129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11862021-11862151:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11948184-11948293:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11958929-11959132:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11959895-11959971:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11976670-11976749:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11981368-11981497:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11984519-11984665:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11985697-11985770:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11989692-11989934:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11995669-11995758:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:11996829-11997451:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12000638-12000767:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12001493-12001573:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12001667-12001753:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12004043-12004235:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12005451-12005615:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12009041-12009162:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12011012-12011210:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12012773-12012937:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12014564-12014656:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12017654-12017896:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12021986-12022113:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:12025063-12025129:1:exon

WWC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: WWC2
product: WW and C2 domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 56 samples with support for all annotated introns
transcript id: XM_019921373.2
SIO_010081: WWC2
subclass of: SO_0000673
so part of: WWC2
location: join(11959021..11959132,11959738..11959775,11959895..11959971,11976670..11976749,11981368..11981497,11984519..11984665,11985697..11985770,11989692..11989934,11995669..11995758,11996829..11997451,12000638..12000767,12001493..12001573,12001667..12001753,12004043..12004235,12005451..12005615,12009041..12009162,12011012..12011210,12012773..12012937,12014564..12014656,12017654..12017896,12021986..12022113,12025063..12027837)
location: region:11959021-12027837:1
so has part: feature:11959021-11959132:1:exon
so has part: feature:11959738-11959775:1:exon
so has part: feature:11959895-11959971:1:exon
so has part: feature:11976670-11976749:1:exon
so has part: feature:11981368-11981497:1:exon
so has part: feature:11984519-11984665:1:exon
so has part: feature:11985697-11985770:1:exon
so has part: feature:11989692-11989934:1:exon
so has part: feature:11995669-11995758:1:exon
so has part: feature:11996829-11997451:1:exon
so has part: feature:12000638-12000767:1:exon
so has part: feature:12001493-12001573:1:exon
so has part: feature:12001667-12001753:1:exon
so has part: feature:12004043-12004235:1:exon
so has part: feature:12005451-12005615:1:exon
so has part: feature:12009041-12009162:1:exon
so has part: feature:12011012-12011210:1:exon
so has part: feature:12012773-12012937:1:exon
so has part: feature:12014564-12014656:1:exon
so has part: feature:12017654-12017896:1:exon
so has part: feature:12021986-12022113:1:exon
so has part: feature:12025063-12027837:1:exon

position:11959021:1
position: 11959021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11959021-11959132:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11959738-11959775:1:exon

position:11959738:1
position: 11959738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11959775:1
position: 11959775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11959895-11959971:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11976670-11976749:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11981368-11981497:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11984519-11984665:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11985697-11985770:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11989692-11989934:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11995669-11995758:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:11996829-11997451:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12000638-12000767:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12001493-12001573:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12001667-12001753:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12004043-12004235:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12005451-12005615:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12009041-12009162:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12011012-12011210:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12012773-12012937:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12014564-12014656:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12017654-12017896:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12021986-12022113:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:12025063-12027837:1:exon

WWC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: WWC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein WWC2 isoform X2
translation: MNDSKGVIKLIFSGSSSSTKYDPDILKAEISTTRLRVKKLKRELSQMKQELLYKEQGFATLKQIDKKMSGGQSGYELSEAKAILTELKSIRKAISSGEKEKQDLMQSLAKLQERFHLDQSIGRSEPDLRSSPVNSHLSLSRQTLDAGSQTSISGDIGVRSRSNLAEKVRLSLQYEEAKRSMANLKIELSKLDSEAWPGALDIEKEKLMLINEKEELLKELQFVTPEKRTPDELESLGAERQRLEKELLSVRGAPSRALAERLKLEERRKELLQKLEETTKLTTYLHSQLKNLSASTLSMSSGSSLGSLASSRGSLNTSSRGSLNSLSSSELYYTSQGDQLDPDYQYKLDFLLQEKGGYIPSGPITTIHEHEVAKSPSQPGRSGPCVAAAAAPGRAPALPEAPTSVASLSSRSSLSSLSPPGSPLVSEGTFPLSPHDVVPLHHFSADLEDCELSSHFADIGLGEDQPLLDSDPGGAPPSLSEDKDLTERARALPHEGPADVEKSLPKRRGIHLLGEKTTCVSAAVSDESVAGDSGVYEAFVKQPSEVEDVLYSEEDVAVTETAQVQIGLRYDAKRSSFMVIVAQLRNLHAFLIPHTSKVYFRVALLPSSTDVSCLFRTKVHPAAESLLFGDVFRVAISQTALQQKTLRVDLCSVSQHQREECLAGTQISLADLPFSNEIFTLWYNLLPSKQMPCKKNEDETEDSVFQPSQPLVDSIDLDAVSALLARTSAELLAVEQELAQEEEEPEQEEEQRGPDGDWLTMQREASDEIVAEEGAEVKLAEGSCCAEDVSSRPSVPEVNEDTSKTENNCANDLGSQPPAGVPALVDKETNTDEAGSAGVAVRPKDRSGLSARQRPFVRSSVIVRSQTFSPGERSQYVCRLNRSDSDSSTLAKKSLFVRNSTERRSLRVKRTVCQPVLRRAAPECPVRTSLDLELDLQASLTRQSRLNDELQALRGLRQKLEDLKAQGETDLPPGVLEDERFQKLLRQAEKQAEQSKEEQKQDLNAEKLMRQVSKDVCRLREQSRKVPRQVQSFREKIAYFTRAKISIPSLPADDV
SIO_010081: WWC2
subclass of: SO_0000673
so part of: WWC2
location: join(11959745..11959775,11959895..11959971,11976670..11976749,11981368..11981497,11984519..11984665,11985697..11985770,11989692..11989934,11995669..11995758,11996829..11997451,12000638..12000767,12001493..12001573,12001667..12001753,12004043..12004235,12005451..12005615,12009041..12009162,12011012..12011210,12012773..12012937,12014564..12014656,12017654..12017896,12021986..12022113,12025063..12025129)
location: region:11959745-12025129:1
so has part: feature:11959745-11959775:1:exon
so has part: feature:11959895-11959971:1:exon
so has part: feature:11976670-11976749:1:exon
so has part: feature:11981368-11981497:1:exon
so has part: feature:11984519-11984665:1:exon
so has part: feature:11985697-11985770:1:exon
so has part: feature:11989692-11989934:1:exon
so has part: feature:11995669-11995758:1:exon
so has part: feature:11996829-11997451:1:exon
so has part: feature:12000638-12000767:1:exon
so has part: feature:12001493-12001573:1:exon
so has part: feature:12001667-12001753:1:exon
so has part: feature:12004043-12004235:1:exon
so has part: feature:12005451-12005615:1:exon
so has part: feature:12009041-12009162:1:exon
so has part: feature:12011012-12011210:1:exon
so has part: feature:12012773-12012937:1:exon
so has part: feature:12014564-12014656:1:exon
so has part: feature:12017654-12017896:1:exon
so has part: feature:12021986-12022113:1:exon
so has part: feature:12025063-12025129:1:exon

XP_019776932.1
type: Protein
SIO_000068: ncbiprotein

position:11959745:1
position: 11959745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11959745-11959775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:11959895-11959971:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11976670-11976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:11981368-11981497:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:11984519-11984665:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:11985697-11985770:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:11989692-11989934:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:11995669-11995758:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:11996829-11997451:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12000638-12000767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12001493-12001573:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12001667-12001753:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12004043-12004235:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12005451-12005615:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12009041-12009162:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12011012-12011210:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:12012773-12012937:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:12014564-12014656:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:12017654-12017896:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:12021986-12022113:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:12025063-12025129:1:exon

LOC101338716
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101338716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(12029140..12029832)
location: region:12029140-12029832:-1
so has part: feature:12029140-12029832:-1:exon

101338716
type: Gene
SIO_000068: ncbigene

position:12029140:-1
position: 12029140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12029832:-1
position: 12029832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12029140-12029832:-1:exon

LOC101338716
type: Exon
subclass of: SO_0000147
RO_0002162: 9739
gene: LOC101338716
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC101338716
subclass of: SO_0000673
so part of: LOC101338716
location: complement(12029140..12029832)
location: region:12029140-12029832:-1
so has part: feature:12029140-12029832:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12029140-12029832:-1:exon

LOC101337537
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC101337537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12031396..12032058)
location: region:12031396-12032058:-1
so has part: feature:12031396-12032058:-1:exon
subclass of: SO_0000010

101337537
type: Gene
SIO_000068: ncbigene

position:12031396:-1
position: 12031396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12032058:-1
position: 12032058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12031396-12032058:-1:exon

LOC101337537
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: LOC101337537
product: putative claudin-24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 5 Proteins, and 18% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_004310461.1
SIO_010081: LOC101337537
subclass of: SO_0000673
so part of: LOC101337537
location: complement(12031396..12032058)
location: region:12031396-12032058:-1
so has part: feature:12031396-12032058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12031396-12032058:-1:exon

LOC101337537
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9739
gene: LOC101337537
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative claudin-24
translation: MALVFRVAMQFVGILLSLLGWVLSIITTFLPHWKNLNLDLNEMENWTVGLWQTCVTQEEVGMQCKDFDSFLALPAELRISRILMFLSNGLGFLGLLVSGFGLDCLRIGERQQDVKKQLLILGGILFWTAGVTALVPVSWVAHRTVQEFWDETIPEIVPRWEFGEALFIGWFAGFSLLLGGCLLNWAACGTQIPLASGHYAVAEMQTQCSYLENGTANPSV
SIO_010081: LOC101337537
subclass of: SO_0000673
so part of: LOC101337537
location: complement(12031396..12032058)
location: region:12031396-12032058:-1
so has part: feature:12031396-12032058:-1:exon

XP_004310509.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12031396-12032058:-1:exon

TRNAR-CCU
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: TRNAR-CCU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 12069031..12069103
location: region:12069031-12069103:1
so has part: feature:12069031-12069103:1:exon
subclass of: SO_0000663

109547678
type: Gene
SIO_000068: ncbigene

position:12069031:1
position: 12069031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12069103:1
position: 12069103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12069031-12069103:1:exon

TRNAR-CCU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9739
gene: TRNAR-CCU
product: tRNA-Arg
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA arginine (anticodon CCU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:12069064..12069066,aa:Arg,seq:cct)
SIO_010081: TRNAR-CCU
subclass of: SO_0000673
so part of: TRNAR-CCU
location: 12069031..12069103
location: region:12069031-12069103:1
so has part: feature:12069031-12069103:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12069031-12069103:1:exon

LOC109547660
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: LOC109547660
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12073270..12080543)
location: region:12073270-12080543:-1
so has part: feature:12073270-12080543:-1:exon
subclass of: SO_0000011

109547660
type: Gene
SIO_000068: ncbigene

position:12073270:-1
position: 12073270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12080543:-1
position: 12080543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12073270-12080543:-1:exon

LOC109547660
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9739
nc RNA class: lncRNA
gene: LOC109547660
product: uncharacterized LOC109547660
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_002173579.2
SIO_010081: LOC109547660
subclass of: SO_0000673
so part of: LOC109547660
location: complement(join(12073270..12075360,12078027..12078181,12079914..12080543))
location: region:12073270-12080543:-1
so has part: feature:12079914-12080543:-1:exon
so has part: feature:12078027-12078181:-1:exon
so has part: feature:12073270-12075360:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12079914-12080543:-1:exon

position:12079914:-1
position: 12079914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12078027-12078181:-1:exon

position:12078027:-1
position: 12078027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12078181:-1
position: 12078181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12073270-12075360:-1:exon

position:12075360:-1
position: 12075360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CDKN2AIP
type: Gene
subclass of: SO_0000704
RO_0002162: 9739
gene: CDKN2AIP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12080504..12084235
location: region:12080504-12084235:1
so has part: feature:12080504-12084235:1:exon
subclass of: SO_0000010

101337828
type: Gene
SIO_000068: ncbigene

position:12080504:1
position: 12080504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12084235:1
position: 12084235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12080504-12084235:1:exon

CDKN2AIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CDKN2AIP
product: CDKN2A interacting protein, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_019921552.2
SIO_010081: CDKN2AIP
subclass of: SO_0000673
so part of: CDKN2AIP
location: join(12080504..12080944,12081382..12081481,12082107..12084235)
location: region:12080504-12084235:1
so has part: feature:12080504-12080944:1:exon
so has part: feature:12081382-12081481:1:exon
so has part: feature:12082107-12084235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12080504-12080944:1:exon

position:12080944:1
position: 12080944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12081382-12081481:1:exon

position:12081382:1
position: 12081382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12081481:1
position: 12081481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12082107-12084235:1:exon

position:12082107:1
position: 12082107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CDKN2AIP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9739
gene: CDKN2AIP
product: CDKN2A interacting protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_004310462.3
SIO_010081: CDKN2AIP
subclass of: SO_0000673
so part of: CDKN2AIP
location: join(12080506..12080944,12081382..12081512,12082107..12084235)
location: region:12080506-12084235:1
so has part: feature:12080506-12080944:1:exon
so has part: feature:12081382-12081512:1:exon
so has part: feature:12082107-12084235:1:exon

position:12080506:1
position: 12080506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12080506-12080944:1:exon