Orcinus orca mitochondrion, complete genome.
mitochondrion Orcinus orca (killer whale)
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Orcinus.
Submitted (30-JUN-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA
Submitted (05-APR-2022) WELLCOME SANGER INSTITUTE, Tree of Life, Wellcome Genome Campus, Hinxton CB10 1SA, United Kingdom
PROVISIONAL REFSEQ: This record has not yet been subject to final\nNCBI review. The reference sequence is identical to OW443382.\nThe assembly mOrcOrc1.1 is based on 34x PacBio data generated by\nthe Darwin Tree of Life Project (https://www.darwintreeoflife.org/)\nand Hi-C data made publicly available by DNA Zoo\n(https://dnazoo.org); PMID:28336562. The assembly process included\nthe following sequence of steps: initial PacBio assembly generation\nwith Hifiasm, retained haplotig separation with purge_dups, and\nHi-C based scaffolding with YaHS. The mitochondrial genome was\nassembled using MitoHiFi. Finally, the assembly was analysed and\nmanually improved using rapid curation. Chromosome-scale scaffolds\nconfirmed by the Hi-C data have been named in order of size. Order\nand orientation of scaffolds in a repetitive region of chromosome\n17 (\n33.6Mb) is uncertain.\nCOMPLETENESS: full length.
TAA stop codon is completed by the addition of 3' A residues to the mRNA