Ailuropoda melanoleuca isolate Jingjing chromosome 20, ASM200744v2, whole genome shotgun sequence.
type: Entry
definition: Ailuropoda melanoleuca isolate Jingjing chromosome 20, ASM200744v2, whole genome shotgun sequence.
sequence version: NC_048237.1
sequence date: 2020-05-26
sequence: sequence
division: CON
label: NC_048237.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA633539
dblink: SAMN04193337
keyword: WGS
keyword: RefSeq
source: Ailuropoda melanoleuca (giant panda)
organism: Ailuropoda melanoleuca
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda.
reference: 1
references: 31810476
reference: 2
references: 28096377
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM022838.1.\nAssembly name: ASM200744v2\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Institute of Zoology, Chinese\nAcademy of Sciences on 2020/04/20. The original whole-genome\nshotgun project has the accession LNAT00000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Institute of Zoology, Chinese Academy of\n Sciences\nAssembly Method :: Scaff10X v. Sep-2017\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 93.0x\nSequencing Technology :: Illumina; 10X Genomics; Flow-sorted\n chromosome sequencing\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Ailuropoda melanoleuca Annotation\n Release 103\nAnnotation Version :: 103\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.4\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 30944335
topology: linear
so has quality: SO_0000987
location: 1..30944335
location: region:1-30944335:1
RO_0002162: 9646

NC_048237
type: RefSeq
SIO_000068: refseq

PRJNA633539
type: BioProject
SIO_000068: bioproject

SAMN04193337
type: BioSample
SIO_000068: biosample

1
title: Chromosome-level genome assembly for giant panda provides novel insights into Carnivora chromosome evolution
author: Fan, H.
author: Wu, Q.
author: Wei, F.
author: Yang, F.
author: Ng, B.L.
author: Hu, Y.
journal: Genome Biol. 20 (1), 267 (2019)
pubmed: 31810476
comments: Publication Status: Online-Only

31810476
type: PubMed
SIO_000068: pubmed

2
title: Comparative genomics reveals convergent evolution between the bamboo-eating giant and red pandas
author: Hu, Y.
author: Wu, Q.
author: Ma, S.
author: Ma, T.
author: Shan, L.
author: Wang, X.
author: Nie, Y.
author: Ning, Z.
author: Yan, L.
author: Xiu, Y.
author: Wei, F.
journal: Proc. Natl. Acad. Sci. U.S.A.
volume: 114
issue: 5
pages: 1081-1086
year: 2017
pubmed: 28096377

28096377
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30944335:1
position: 30944335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-30944335:1:source
so part of: sequence
organism: Ailuropoda melanoleuca
mol type: genomic DNA
isolate: Jingjing
chromosome: 20
sex: female
tissue type: blood
dev stage: adult

9646
type: Taxonomy
SIO_000068: taxonomy

LOC117797274
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(29446..36056)
location: region:29446-36056:-1
so has part: feature:29446-36056:-1:exon
subclass of: SO_0000010

117797274
type: Gene
SIO_000068: ncbigene

position:29446:-1
position: 29446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36056:-1
position: 36056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29446-36056:-1:exon

LOC117797274
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797274
product: olfactory receptor 4S2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_034648662.1
SIO_010081: LOC117797274
subclass of: SO_0000673
so part of: LOC117797274
location: complement(join(29446..30422,36041..36056))
location: region:29446-36056:-1
so has part: feature:36041-36056:-1:exon
so has part: feature:29446-30422:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36041-36056:-1:exon

position:36041:-1
position: 36041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:29446-30422:-1:exon

position:30422:-1
position: 30422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117797274
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797274
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4S2-like
translation: MASETGNQSHQASIIWVPTEVANNVTEFIFLGLSQDPGMQLMFFALFLLFYIVILVGNLLILLTVFSDPRLHTPMYFFLSNLSFVDIAYSSATAPKMIADLISEKKTISYWGCVTQMFTFHFFGCAEIFVLTVMAFDRYAAICQPLRYTTIMSANACIVLASLSWLGALGHSFVQTLLTFQLPFCNNRVIDHYFCDVHPVLKLACADTTLVNMLVIANSGLISLGCFLILLASYTVILFSLHKRSSESRRKALSTCGSHFTVVTFFFVPCIFIYLRPSTTFPLDKAVSVFYTTITPMLNPLIYTLRNNDVKNAMKWIWSRKVSLKEKQVG
SIO_010081: LOC117797274
subclass of: SO_0000673
so part of: LOC117797274
location: complement(join(29446..30422,36041..36056))
location: region:29446-36056:-1
so has part: feature:36041-36056:-1:exon
so has part: feature:29446-30422:-1:exon

XP_034504553.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:36041-36056:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:29446-30422:-1:exon

LOC117797217
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(39697..40623)
location: region:39697-40623:-1
so has part: feature:39697-40623:-1:exon
subclass of: SO_0000010

117797217
type: Gene
SIO_000068: ncbigene

position:39697:-1
position: 39697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:40623:-1
position: 40623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:39697-40623:-1:exon

LOC117797217
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797217
product: olfactory receptor 4K15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins, and 8% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648307.1
SIO_010081: LOC117797217
subclass of: SO_0000673
so part of: LOC117797217
location: complement(39697..40623)
location: region:39697-40623:-1
so has part: feature:39697-40623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:39697-40623:-1:exon

LOC117797217
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797217
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4K15-like
translation: MDQGNKSGVTEFILHGLSGSRELQLFYFAFFTLFYLSVVLGNLLIVLTVISEPALHTPMYFLLSNLSLIDVCLSTSATPKMITDFLMEHKTISFDGCMTQIFFLHVFAGGEMMLLVAMAYDRYVAICRPLYYASIMSLRKCTSLVVGSWLVGVLHSLSQLVFIVNLPFCGPNKVDSYYCDLPLVIKLACTNTFTLEVLMLSDSGLMATSSFVLLLISYMLILVTVRRRPSAGMAKARATLTAHITVVTLFFGSCIFIYAWPFSSLPVDKVLSIFYTVFTPLLNPMIYTLRNKEVISAMQKLRNQQVRF
SIO_010081: LOC117797217
subclass of: SO_0000673
so part of: LOC117797217
location: complement(39697..40623)
location: region:39697-40623:-1
so has part: feature:39697-40623:-1:exon

XP_034504198.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:39697-40623:-1:exon

LOC117797275
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(60732..90153)
location: region:60732-90153:-1
so has part: feature:60732-90153:-1:exon
subclass of: SO_0000010

117797275
type: Gene
SIO_000068: ncbigene

position:60732:-1
position: 60732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90153:-1
position: 90153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60732-90153:-1:exon

LOC117797275
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797275
product: olfactory receptor 4N5-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648663.1
SIO_010081: LOC117797275
subclass of: SO_0000673
so part of: LOC117797275
location: complement(join(60732..61431,74896..75161,90112..90153))
location: region:60732-90153:-1
so has part: feature:90112-90153:-1:exon
so has part: feature:74896-75161:-1:exon
so has part: feature:60732-61431:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90112-90153:-1:exon

position:90112:-1
position: 90112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:74896-75161:-1:exon

position:74896:-1
position: 74896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:75161:-1
position: 75161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:60732-61431:-1:exon

position:61431:-1
position: 61431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117797275
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797275
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4N5-like
translation: MEEFRYHRLRYLVEAEEMENDNSTVVKFILLGLTQSRDIQLLVSVLILIFYLIILPRNFLIILTIRSDPGLTAPLYFFRGNLAFLDSSYSFIVAPRMLVDFLSECKTISFEGCISQIFFLHLFTGTEIVLLISMSFDRYIAISKPLHYSTIMSQRACAGLVVTSWTVGFLHTMSQLALTLYLPFCGPNVVDSFFCDLPFIIQLACIDMYVLGIFMISTSGVIALISFLLLLTSYVIVLVTIKAHSSTGTSKALSTCTAHFMVVLMFFGPCIFIYVWPFTNFLVDKVLSVFYTIFTPFLNPLIYTLRNQEVKTAVKKKLRHQNLNLGKTTPSYPVQ
SIO_010081: LOC117797275
subclass of: SO_0000673
so part of: LOC117797275
location: complement(join(60732..61431,74896..75161,90112..90153))
location: region:60732-90153:-1
so has part: feature:90112-90153:-1:exon
so has part: feature:74896-75161:-1:exon
so has part: feature:60732-61431:-1:exon

XP_034504554.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:90112-90153:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:74896-75161:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:60732-61431:-1:exon

LOC100468466
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100468466
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<101216..102138)
location: region:101216-102138:-1
so has part: feature:101216-102138:-1:exon
subclass of: SO_0000010

100468466
type: Gene
SIO_000068: ncbigene

position:101216:-1
position: 101216
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:102138:-1
position: 102138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:101216-102138:-1:exon

LOC100468466
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100468466
product: olfactory receptor 11H2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_011218254.3
SIO_010081: LOC100468466
subclass of: SO_0000673
so part of: LOC100468466
location: complement(<101216..102138)
location: region:101216-102138:-1
so has part: feature:101216-102138:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:101216-102138:-1:exon

LOC100468466
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100468466
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 11H2-like
translation: MDMSGSRSSSESVREFILLGFSCNREIQVVLFMFFSIVYLLTLVGNGAIISAVCWDQHLHTPMYILLGNFAFLEIWYVNSTVPNTLINFLSETKAISFTGCFLQLYFFFSMGSTECFFLSAMAFDQYFAICHPLHYATIMTVQRCFNLVISCWVCGFLWYLVPVILISQQPFCGLNAIDHFVCDSGPLLTLSCAPAPVSKLISYTLNSLIILLSFFFXLLSYVLVLFAVLQFPSASSQHKAFSTCGSHLSVVLLFYRTIMVMHVSPGYSHSTLMPKIMTLFYAMVTPLFNPLIYSLRNKEMKNALWKV
SIO_010081: LOC100468466
subclass of: SO_0000673
so part of: LOC100468466
location: complement(<101216..102138)
location: region:101216-102138:-1
so has part: feature:101216-102138:-1:exon

XP_011216556.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:101216-102138:-1:exon

LOC109488751
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC109488751
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 117135..117910
location: region:117135-117910:1
so has part: feature:117135-117910:1:exon

109488751
type: Gene
SIO_000068: ncbigene

position:117135:1
position: 117135
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:117910:1
position: 117910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117135-117910:1:exon

LOC109488751
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC109488751
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC109488751
subclass of: SO_0000673
so part of: LOC109488751
location: 117135..117910
location: region:117135-117910:1
so has part: feature:117135-117910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117135-117910:1:exon

LOC117797269
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797269
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 120945..121891
location: region:120945-121891:1
so has part: feature:120945-121891:1:exon
subclass of: SO_0000010

117797269
type: Gene
SIO_000068: ncbigene

position:120945:1
position: 120945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:121891:1
position: 121891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120945-121891:1:exon

LOC117797269
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797269
product: olfactory receptor 11H12-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
transcript id: XM_034648659.1
SIO_010081: LOC117797269
subclass of: SO_0000673
so part of: LOC117797269
location: 120945..121891
location: region:120945-121891:1
so has part: feature:120945-121891:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:120945-121891:1:exon

LOC117797269
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797269
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 11H12-like
translation: MNMSGSGSSSESVREFILLGFSCNREIRVVLFMSFSIVYLLTLVGNGAIISAVCWDQHLHTPMYILLGNFAFLEIWYVNSTVPNTLINFLSETKTISITGCFLQLYFFFSTGSTECFFLSAMAFDRYFAICHPLHYGTLMTGQCCFNQVISCWVCGFLWYLVPVILIFQLPFCGPNSIDHFVCDSGPLLTLPCAPAPVSKLISYTLSSLIILLSFXFLLLSYVLVLLAVLLLPSASSQHKAFSTCGSHLSVVLLFYRTIMVMHVSPGSSHSTLMPKIMTLIYAMVTPLFNPLIYSLRNKEMKNALWKVLEKLKCL
SIO_010081: LOC117797269
subclass of: SO_0000673
so part of: LOC117797269
location: 120945..121891
location: region:120945-121891:1
so has part: feature:120945-121891:1:exon

XP_034504550.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:120945-121891:1:exon

LOC100465966
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100465966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(131577..136777)
location: region:131577-136777:-1
so has part: feature:131577-136777:-1:exon
subclass of: SO_0000010

100465966
type: Gene
SIO_000068: ncbigene

position:131577:-1
position: 131577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:136777:-1
position: 136777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:131577-136777:-1:exon

LOC100465966
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100465966
product: olfactory receptor 4S2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
transcript id: XM_002931288.2
SIO_010081: LOC100465966
subclass of: SO_0000673
so part of: LOC100465966
location: complement(join(131577..132550,136744..136777))
location: region:131577-136777:-1
so has part: feature:136744-136777:-1:exon
so has part: feature:131577-132550:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:136744-136777:-1:exon

position:136744:-1
position: 136744
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:131577-132550:-1:exon

position:132550:-1
position: 132550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100465966
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100465966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 4S2
translation: MSWDQTQEDGQRNQSHQASIIWVPTEVANNVTEFIFLGLSQDPGMQPMSFALFLLFCIVIMVGNLLILLMVFSDPRLQTPMYFFLSNLSFVDIAYSSATAPKMIADFISEKKTISYWGCVTQMFTFHFFGCAEIFVLTVMAFDRYADICQPLRYTTIMSGNACIVLASLSWLGALGHSFVQTLLTFHLPFCNNRVIDHYVCDHPVLKLACADTTLVNMLVIANSGLISLGRFLILLASYTIILFSLCKQSSESRCKALSTCGSHFTVVTFFFVPCIFIYLHPSTTFPLDKAVCVFYTTITPMLNPLIYTLRNEDVKNAMKRIWSRKVSLKEKQVG
SIO_010081: LOC100465966
subclass of: SO_0000673
so part of: LOC100465966
location: complement(join(131577..132550,136744..136777))
location: region:131577-136777:-1
so has part: feature:136744-136777:-1:exon
so has part: feature:131577-132550:-1:exon

XP_002931334.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:136744-136777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:131577-132550:-1:exon

LOC117797276
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797276
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(146580..152372)
location: region:146580-152372:-1
so has part: feature:146580-152372:-1:exon

117797276
type: Gene
SIO_000068: ncbigene

position:146580:-1
position: 146580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152372:-1
position: 152372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146580-152372:-1:exon

LOC117797276
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC117797276
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117797276
subclass of: SO_0000673
so part of: LOC117797276
location: complement(146580..147505)
location: region:146580-147505:-1
so has part: feature:146580-147505:-1:exon

position:147505:-1
position: 147505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:146580-147505:-1:exon

LOC117797276
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC117797276
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC117797276
subclass of: SO_0000673
so part of: LOC117797276
location: complement(152367..152372)
location: region:152367-152372:-1
so has part: feature:152367-152372:-1:exon

position:152367:-1
position: 152367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:152367-152372:-1:exon

LOC100468800
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100468800
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 164118..165102
location: region:164118-165102:1
so has part: feature:164118-165102:1:exon
subclass of: SO_0000010

100468800
type: Gene
SIO_000068: ncbigene

position:164118:1
position: 164118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:165102:1
position: 165102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:164118-165102:1:exon

LOC100468800
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100468800
product: olfactory receptor 11H12-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins
transcript id: XM_011218333.3
SIO_010081: LOC100468800
subclass of: SO_0000673
so part of: LOC100468800
location: 164118..165102
location: region:164118-165102:1
so has part: feature:164118-165102:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:164118-165102:1:exon

LOC100468800
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100468800
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 11H12-like
translation: MNVSEPYSSFASVRKFILLGFSCEWKTQILLFSLFTTTYVLTVTGNGAIVCALWCEWRLHSPMYIFLGNFSFLEIWYVXSTVPKMLVHFLSDKKAISFTGCFLPFYFFFSLGTSECFLLAVMAFDRYLAICHPLHYPNIMTGHSCTKLVIICCVCGFPWFLTPIVFISQMPFCGPNMIDHIVCDPGPLFALACASAPTTQQLCYTLSSLVIFGNFLFILGSYTLVLLAVLHMPSATGRHKAFSTCASHLAVVSLFYGSLMVMYVSPGLGHSAGVQKFATLFYAMVTPLFNILIYSFWNKEIKAALRKVLGRLNTTQDILDDPSIIRSV
SIO_010081: LOC100468800
subclass of: SO_0000673
so part of: LOC100468800
location: 164118..165102
location: region:164118-165102:1
so has part: feature:164118-165102:1:exon

XP_011216635.3
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:164118-165102:1:exon

LOC117797277
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797277
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 175552..176534
location: region:175552-176534:1
so has part: feature:175552-176534:1:exon

117797277
type: Gene
SIO_000068: ncbigene

position:175552:1
position: 175552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:176534:1
position: 176534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175552-176534:1:exon

LOC117797277
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC117797277
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
pseudo: true
SIO_010081: LOC117797277
subclass of: SO_0000673
so part of: LOC117797277
location: 175552..175560
location: region:175552-175560:1
so has part: feature:175552-175560:1:exon

position:175560:1
position: 175560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175552-175560:1:exon

LOC117797277
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC117797277
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins
pseudo: true
SIO_010081: LOC117797277
subclass of: SO_0000673
so part of: LOC117797277
location: 175952..176534
location: region:175952-176534:1
so has part: feature:175952-176534:1:exon

position:175952:1
position: 175952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:175952-176534:1:exon

LOC117797278
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 187939..188736
location: region:187939-188736:1
so has part: feature:187939-188736:1:exon
subclass of: SO_0000010

117797278
type: Gene
SIO_000068: ncbigene

position:187939:1
position: 187939
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:188736:1
position: 188736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187939-188736:1:exon

LOC117797278
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797278
product: olfactory receptor 11H6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648664.1
SIO_010081: LOC117797278
subclass of: SO_0000673
so part of: LOC117797278
location: 187939..188736
location: region:187939-188736:1
so has part: feature:187939-188736:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:187939-188736:1:exon

LOC117797278
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797278
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 11H6-like
translation: MYILLANFAFLEMWYVTSTVPNMLVNLLSETSTISFYGCFLQFYFFFSMGTIETFFLSAMAFDRYLAICRPLHYPTLMTVQRCIRIGAGCWVCGFSCFLLPVYLISQLPFCGPNTIDHFLCDPGPLMNLSCVPAPATEIICAIFNSVLIFSTFLFITSSYTLVIRAVLKVPSAEGRQKAFSTCGSHLAVVSLFYGSIMVMYVSPKAGNPAGIQKIVTLFYSVITPFFNPLIYSLRNKEMKKALRKLFRIMRFGQIQPLKS
SIO_010081: LOC117797278
subclass of: SO_0000673
so part of: LOC117797278
location: 187954..188736
location: region:187954-188736:1
so has part: feature:187954-188736:1:exon

XP_034504555.1
type: Protein
SIO_000068: ncbiprotein

position:187954:1
position: 187954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:187954-188736:1:exon

LOC117797279
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 198827..199771
location: region:198827-199771:1
so has part: feature:198827-199771:1:exon
subclass of: SO_0000010

117797279
type: Gene
SIO_000068: ncbigene

position:198827:1
position: 198827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:199771:1
position: 199771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198827-199771:1:exon

LOC117797279
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797279
product: olfactory receptor 11H6-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins
transcript id: XM_034648665.1
SIO_010081: LOC117797279
subclass of: SO_0000673
so part of: LOC117797279
location: 198827..199771
location: region:198827-199771:1
so has part: feature:198827-199771:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:198827-199771:1:exon

LOC117797279
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797279
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 11H6-like
translation: MYILLANFSFLEMWYVTSTIPNMLANLLSENSTISFYGCFLQFYFFFSMGTIETFFLSAMAFDRYLAICRPLHYPTLMTVQHCIRIGAGCWVCGFSCFLLPVYLISQPPFCGPNTIDHFLCDPGPLMNLSCVPVSATEIICAVFNSVLIFSTFLFITSSYTLVIRAVLKVPSAEGRHKAFSTYGSHLAVVSLFYGSIMLMYLSPMAGNPAGIQKIVTSFYSVMTPFFNPLIYSPWNKEMKKALRKLFRIMRFGQIHPLKS
SIO_010081: LOC117797279
subclass of: SO_0000673
so part of: LOC117797279
location: 198989..199771
location: region:198989-199771:1
so has part: feature:198989-199771:1:exon

XP_034504556.1
type: Protein
SIO_000068: ncbiprotein

position:198989:1
position: 198989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:198989-199771:1:exon

LOC109488792
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC109488792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 210709..211527
location: region:210709-211527:1
so has part: feature:210709-211527:1:exon
subclass of: SO_0000010

109488792
type: Gene
SIO_000068: ncbigene

position:210709:1
position: 210709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:211527:1
position: 211527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:210709-211527:1:exon

LOC109488792
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC109488792
product: olfactory receptor 11G2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
transcript id: XM_019794037.2
SIO_010081: LOC109488792
subclass of: SO_0000673
so part of: LOC109488792
location: 210709..211527
location: region:210709-211527:1
so has part: feature:210709-211527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:210709-211527:1:exon

LOC109488792
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC109488792
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 11G2-like
translation: MGFPSSPEMQLLYFGLFSVVYILTLMGNTAIVYAVPWDRHLHTPMYIFLGNFSLLEICYVTTTIPTMLANFLSTSKSISFVSCFTQFYFFSFGCYEGFFLCITAFERYLAISHPLHYPQIMTKQLYTGLVIFGWSGGVILSLTPIVLISQLPFCGPNTINHFLCDPVPPMTLSCSEDTITQLIYSTFNAIFMIGTFLFILYSYALVILTVLWMPSWAGKHKAFVTCASHLAVVILFYGSIMVMYISPGSGHPVKIQKFITLFYSVITPFAIL
SIO_010081: LOC109488792
subclass of: SO_0000673
so part of: LOC109488792
location: 210709..211527
location: region:210709-211527:1
so has part: feature:210709-211527:1:exon

XP_019649596.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:210709-211527:1:exon

LOC117797280
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797280
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 236276..237228
location: region:236276-237228:1
so has part: feature:236276-237228:1:exon

117797280
type: Gene
SIO_000068: ncbigene

position:236276:1
position: 236276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:237228:1
position: 237228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236276-237228:1:exon

LOC117797280
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC117797280
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
pseudo: true
SIO_010081: LOC117797280
subclass of: SO_0000673
so part of: LOC117797280
location: 236276..236634
location: region:236276-236634:1
so has part: feature:236276-236634:1:exon

position:236634:1
position: 236634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:236276-236634:1:exon

LOC105234907
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC105234907
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 244161..245706
location: region:244161-245706:1
so has part: feature:244161-245706:1:exon

105234907
type: Gene
SIO_000068: ncbigene

position:244161:1
position: 244161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:245706:1
position: 245706
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244161-245706:1:exon

LOC105234907
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC105234907
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC105234907
subclass of: SO_0000673
so part of: LOC105234907
location: 244161..244277
location: region:244161-244277:1
so has part: feature:244161-244277:1:exon

position:244277:1
position: 244277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244161-244277:1:exon

LOC105234907
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC105234907
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC105234907
subclass of: SO_0000673
so part of: LOC105234907
location: 245085..245706
location: region:245085-245706:1
so has part: feature:245085-245706:1:exon

position:245085:1
position: 245085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:245085-245706:1:exon

LOC100468716
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100468716
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(254873..255839)
location: region:254873-255839:-1
so has part: feature:254873-255839:-1:exon
subclass of: SO_0000010

100468716
type: Gene
SIO_000068: ncbigene

position:254873:-1
position: 254873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:255839:-1
position: 255839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:254873-255839:-1:exon

LOC100468716
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100468716
product: olfactory receptor 11G2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 40 Proteins
transcript id: XM_011217964.3
SIO_010081: LOC100468716
subclass of: SO_0000673
so part of: LOC100468716
location: complement(254873..255839)
location: region:254873-255839:-1
so has part: feature:254873-255839:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:254873-255839:-1:exon

LOC100468716
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100468716
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 11G2
translation: MRTLETTNISGSVSEFILLGFPCRRDIQVLLFVIFSLIYLLTLMXNTSIICAVWSSQKLHTPMYILLANFSFLEICYVTSDVPKMLANIISQTKSISYAGCLLQFYFFFSMCAAEGLFLSVMSFDRFLAICRPLHYPTIMTHHLCAWLVVFCWAGGFLWLLTPLTLISQVPFCGPNTIDHFLCDLAPLLALSCASVSGITLICGVFSSLIIFLTFLYILGTYICVLSVVLEVPPGSGRHKAFSTCASHLAVVCLFYGSVMVMYVSPGSGVYPGMQKFVNLFYALATPFFNPLIYNFRNKDMKEALKKIMNVLLWEMSKGFKS
SIO_010081: LOC100468716
subclass of: SO_0000673
so part of: LOC100468716
location: complement(254873..255839)
location: region:254873-255839:-1
so has part: feature:254873-255839:-1:exon

XP_011216266.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:254873-255839:-1:exon

LOC100468966
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100468966
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(264465..265401)
location: region:264465-265401:-1
so has part: feature:264465-265401:-1:exon

100468966
type: Gene
SIO_000068: ncbigene

position:264465:-1
position: 264465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:265401:-1
position: 265401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:264465-265401:-1:exon

LOC100468966
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC100468966
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100468966
subclass of: SO_0000673
so part of: LOC100468966
location: complement(264465..265401)
location: region:264465-265401:-1
so has part: feature:264465-265401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:264465-265401:-1:exon

LOC100469214
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100469214
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 279015..281198
location: region:279015-281198:1
so has part: feature:279015-281198:1:exon
subclass of: SO_0000010

100469214
type: Gene
SIO_000068: ncbigene

position:279015:1
position: 279015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281198:1
position: 281198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:279015-281198:1:exon

LOC100469214
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100469214
product: olfactory receptor 11H6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 49 Proteins
transcript id: XM_011217966.2
SIO_010081: LOC100469214
subclass of: SO_0000673
so part of: LOC100469214
location: join(279015..279032,280266..281198)
location: region:279015-281198:1
so has part: feature:279015-279032:1:exon
so has part: feature:280266-281198:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:279015-279032:1:exon

position:279032:1
position: 279032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280266-281198:1:exon

position:280266:1
position: 280266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100469214
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100469214
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:280992..280994,aa:OTHER)
product: LOW QUALITY PROTEIN: olfactory receptor 11H6
translation: MVTAAMKETTSEARNISHTVSEFILLGFPFRWEIQFLLFSIFFVTYILTFLGNMAIVCAVCWDCRLHTPMYILLANFSFLEICCVNSDVTNMLANFLSQTKTISFTQCLLQLYFFFSLSTTECLFLSIMAYDRFLAICRPLHYPTVMTIWFCGSLVIFCWVYGFLWFLIPVILITQLTFCGLNVIDDFLCDLGPLLALASACVSIPGTVLICGTISSLLIFSTFFYIMGSYTLVLRAVVQVPSQAGCKXAFSTCSSHLAVLFLFYGSVMIAYVSPGSGQAEGMQKFTTLFYSVLTPLFNHMIYSLRNKEMKDALKF
SIO_010081: LOC100469214
subclass of: SO_0000673
so part of: LOC100469214
location: join(279015..279032,280266..281198)
location: region:279015-281198:1
so has part: feature:279015-279032:1:exon
so has part: feature:280266-281198:1:exon

XP_011216268.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:279015-279032:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280266-281198:1:exon

LOC117797309
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797309
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(296870..297004)
location: region:296870-297004:-1
so has part: feature:296870-297004:-1:exon
subclass of: SO_0000623

117797309
type: Gene
SIO_000068: ncbigene

position:296870:-1
position: 296870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:297004:-1
position: 297004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:296870-297004:-1:exon

LOC117797309
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: snRNA
gene: LOC117797309
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004622240.1
SIO_010081: LOC117797309
subclass of: SO_0000673
so part of: LOC117797309
location: complement(296870..297004)
location: region:296870-297004:-1
so has part: feature:296870-297004:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:296870-297004:-1:exon

LOC117797268
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797268
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 304322..305301
location: region:304322-305301:1
so has part: feature:304322-305301:1:exon

117797268
type: Gene
SIO_000068: ncbigene

position:304322:1
position: 304322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305301:1
position: 305301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304322-305301:1:exon

LOC117797268
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC117797268
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC117797268
subclass of: SO_0000673
so part of: LOC117797268
location: 304322..305301
location: region:304322-305301:1
so has part: feature:304322-305301:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:304322-305301:1:exon

LOC100477874
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100477874
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 325738..326696
location: region:325738-326696:1
so has part: feature:325738-326696:1:exon
subclass of: SO_0000010

100477874
type: Gene
SIO_000068: ncbigene

position:325738:1
position: 325738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326696:1
position: 326696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325738-326696:1:exon

LOC100477874
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100477874
product: olfactory receptor 11G2-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins
transcript id: XM_002931351.2
SIO_010081: LOC100477874
subclass of: SO_0000673
so part of: LOC100477874
location: 325738..326696
location: region:325738-326696:1
so has part: feature:325738-326696:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:325738-326696:1:exon

LOC100477874
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100477874
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: olfactory receptor 11G2-like
translation: MKISNTPNTSSTITGFILLGFLCPREGQMLLFLLFSVLYLLTLTGNGSTICAVCWDQRLHTPMYILLANFSFLEIWYVTSTVPNMLANFLSDTKVIFSGCFLQFYFFFSFGSTECFFXAIMAFDWYLAICRPLHYPTIMTGHLCTNLVVSCWILGFFWFLIPITIISQMSFCGSRIIDHFLCDPGPLLALTCKKAPVVERVLSTLSPLPLVIPFLFIMGSYALVLRTVLKVPSAAGKRKAFSTCGSHLAVVSLFYGSVLVMYGSQTSEHEAGTQKIVTLFYSVITPLLNPVIYSLRNKYMKNALQKLLGM
SIO_010081: LOC100477874
subclass of: SO_0000673
so part of: LOC100477874
location: 325765..326696
location: region:325765-326696:1
so has part: feature:325765-326696:1:exon

XP_002931397.2
type: Protein
SIO_000068: ncbiprotein

position:325765:1
position: 325765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:325765-326696:1:exon

LOC117797272
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797272
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 330523..331481
location: region:330523-331481:1
so has part: feature:330523-331481:1:exon

117797272
type: Gene
SIO_000068: ncbigene

position:330523:1
position: 330523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331481:1
position: 331481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:330523-331481:1:exon

LOC117797272
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC117797272
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC117797272
subclass of: SO_0000673
so part of: LOC117797272
location: 330523..331481
location: region:330523-331481:1
so has part: feature:330523-331481:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:330523-331481:1:exon

LOC100477693
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100477693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 351447..354832
location: region:351447-354832:1
so has part: feature:351447-354832:1:exon
subclass of: SO_0000010

100477693
type: Gene
SIO_000068: ncbigene

position:351447:1
position: 351447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:354832:1
position: 354832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:351447-354832:1:exon

LOC100477693
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100477693
product: olfactory receptor 11H6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648547.1
SIO_010081: LOC100477693
subclass of: SO_0000673
so part of: LOC100477693
location: join(351447..353129,354793..354832)
location: region:351447-354832:1
so has part: feature:351447-353129:1:exon
so has part: feature:354793-354832:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:351447-353129:1:exon

position:353129:1
position: 353129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:354793-354832:1:exon

position:354793:1
position: 354793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100477693
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100477693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 11H6
translation: MFIIIHSLVTSVSLTALESQNTTTQHFVTEFVLLGFPGRGEMQNVFFSFILVVYLLTLLGNGVIVCVVKWDKRLHTPMYIFLGNFAFLEIWYISSTVPNMLVNILSETKTISFTGCFLQFYFFFSLGTTECFFLSVMAYERYLAICRPLHYPSIMTGKLCVVLVCVCWVSGFLCYPVPIVLISQLPFCGPNIIEHFVCDPGPLFALACIPAPSTEFICYTFNSLIIFGPFLSILGSYTLVLRAVLRVPSGAGRTKAFSTCGSHLMVVSLFYGTLMVMYVSPTSGNPTGMQIITLVYSAVTPLLNPLIYSLRNKDMKDALKKALGGSYKDITQNSQQ
SIO_010081: LOC100477693
subclass of: SO_0000673
so part of: LOC100477693
location: join(352159..353129,354793..354832)
location: region:352159-354832:1
so has part: feature:352159-353129:1:exon
so has part: feature:354793-354832:1:exon

XP_034504438.1
type: Protein
SIO_000068: ncbiprotein

position:352159:1
position: 352159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:352159-353129:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:354793-354832:1:exon

LOC100477948
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100477948
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 357291..358146
location: region:357291-358146:1
so has part: feature:357291-358146:1:exon

100477948
type: Gene
SIO_000068: ncbigene

position:357291:1
position: 357291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:358146:1
position: 358146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:357291-358146:1:exon

LOC100477948
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC100477948
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 17% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100477948
subclass of: SO_0000673
so part of: LOC100477948
location: 357291..358146
location: region:357291-358146:1
so has part: feature:357291-358146:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:357291-358146:1:exon

TTC5
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(445890..464107)
location: region:445890-464107:-1
so has part: feature:445890-464107:-1:exon
subclass of: SO_0000010

100483642
type: Gene
SIO_000068: ncbigene

position:445890:-1
position: 445890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464107:-1
position: 464107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445890-464107:-1:exon

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_011237561.3
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: complement(join(445890..446521,452640..452854,453030..453176,453724..453780,455871..455962,457001..457151,457534..457745,460051..460183,464017..464107))
location: region:445890-464107:-1
so has part: feature:464017-464107:-1:exon
so has part: feature:460051-460183:-1:exon
so has part: feature:457534-457745:-1:exon
so has part: feature:457001-457151:-1:exon
so has part: feature:455871-455962:-1:exon
so has part: feature:453724-453780:-1:exon
so has part: feature:453030-453176:-1:exon
so has part: feature:452640-452854:-1:exon
so has part: feature:445890-446521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464017-464107:-1:exon

position:464017:-1
position: 464017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:460051-460183:-1:exon

position:460051:-1
position: 460051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:460183:-1
position: 460183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:457534-457745:-1:exon

position:457534:-1
position: 457534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457745:-1
position: 457745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:457001-457151:-1:exon

position:457001:-1
position: 457001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457151:-1
position: 457151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:455871-455962:-1:exon

position:455871:-1
position: 455871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:455962:-1
position: 455962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:453724-453780:-1:exon

position:453724:-1
position: 453724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453780:-1
position: 453780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:453030-453176:-1:exon

position:453030:-1
position: 453030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453176:-1
position: 453176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:452640-452854:-1:exon

position:452640:-1
position: 452640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:452854:-1
position: 452854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:445890-446521:-1:exon

position:446521:-1
position: 446521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TTC5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TTC5
product: tetratricopeptide repeat domain 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_002929517.4
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: complement(join(445890..446521,448994..449138,452640..452854,453030..453176,453724..453780,455871..455962,457001..457151,457534..457745,460051..460183,464017..464107))
location: region:445890-464107:-1
so has part: feature:464017-464107:-1:exon
so has part: feature:460051-460183:-1:exon
so has part: feature:457534-457745:-1:exon
so has part: feature:457001-457151:-1:exon
so has part: feature:455871-455962:-1:exon
so has part: feature:453724-453780:-1:exon
so has part: feature:453030-453176:-1:exon
so has part: feature:452640-452854:-1:exon
so has part: feature:448994-449138:-1:exon
so has part: feature:445890-446521:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:464017-464107:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460051-460183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457534-457745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457001-457151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455871-455962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453724-453780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453030-453176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452640-452854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448994-449138:-1:exon

position:448994:-1
position: 448994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:449138:-1
position: 449138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:445890-446521:-1:exon

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X1
translation: MMADEDEEVKQVLQKLQELVDQLYSFRECYFETHGVEDAGRKQQDVREEMEKTVRQMEEAVGSVQGKAQVLMLTGKALNVTPDYSPRAEELLSKAVKLEPKLVEAWNQLGEVYWKKGDIAAAHTCFSGALTHCKNKVSLQNLSMVLRQLRTDTGDEHSRHVMDSVRQAKLAVQMDVHDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRTARCNPDLHLNRATLHKYEENYGEALEGFSRAATLDPAWPEPQQREQQLVEFLNRLTSLLESKGKVKTKKLQSMLGSLRPAHLGPCGDGHYQSASGQKLTLELRPLSALQPGVNSGAVVLGKVVFSLTTEEKVPFTFGLVDSDGPCYAVMVYNMVQSWGVLIGDSVAIPEPSLRLHRIQHKGKDYCFSSVRVETPLLLVVNGKPQGSSSQAAATVASRPQCE
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: complement(join(446402..446521,448994..449138,452640..452854,453030..453176,453724..453780,455871..455962,457001..457151,457534..457745,460051..460183,464017..464067))
location: region:446402-464067:-1
so has part: feature:464017-464067:-1:exon
so has part: feature:460051-460183:-1:exon
so has part: feature:457534-457745:-1:exon
so has part: feature:457001-457151:-1:exon
so has part: feature:455871-455962:-1:exon
so has part: feature:453724-453780:-1:exon
so has part: feature:453030-453176:-1:exon
so has part: feature:452640-452854:-1:exon
so has part: feature:448994-449138:-1:exon
so has part: feature:446402-446521:-1:exon

XP_002929563.1
type: Protein
SIO_000068: ncbiprotein

position:446402:-1
position: 446402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:464067:-1
position: 464067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464017-464067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460051-460183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457534-457745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457001-457151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455871-455962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453724-453780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453030-453176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452640-452854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:448994-449138:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:446402-446521:-1:exon

TTC5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TTC5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tetratricopeptide repeat protein 5 isoform X2
translation: MMADEDEEVKQVLQKLQELVDQLYSFRECYFETHGVEDAGRKQQDVREEMEKTVRQMEEAVGSVQGKAQVLMLTGKALNVTPDYSPRAEELLSKAVKLEPKLVEAWNQLGEVYWKKGDIAAAHTCFSGALTHCKNKVSLQNLSMVLRQLRTDTGDEHSRHVMDSVRQAKLAVQMDVHDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRTARCNPDLHLNRATLHKYEENYGEALEGFSRAATLDPAWPEPQQREQQLVEFLNRLTSLLESKGKVKTKKLQSMLGSLRPAHLGPCGDGHYQSASGQKLTLELRPLSALQPGVNSGAVVLGKVVFSLTTEEKVPLTIAFPVFVWKHPSCWW
SIO_010081: TTC5
subclass of: SO_0000673
so part of: TTC5
location: complement(join(446470..446521,452640..452854,453030..453176,453724..453780,455871..455962,457001..457151,457534..457745,460051..460183,464017..464067))
location: region:446470-464067:-1
so has part: feature:464017-464067:-1:exon
so has part: feature:460051-460183:-1:exon
so has part: feature:457534-457745:-1:exon
so has part: feature:457001-457151:-1:exon
so has part: feature:455871-455962:-1:exon
so has part: feature:453724-453780:-1:exon
so has part: feature:453030-453176:-1:exon
so has part: feature:452640-452854:-1:exon
so has part: feature:446470-446521:-1:exon

XP_011235863.1
type: Protein
SIO_000068: ncbiprotein

position:446470:-1
position: 446470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464017-464067:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:460051-460183:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:457534-457745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:457001-457151:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:455871-455962:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:453724-453780:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:453030-453176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452640-452854:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:446470-446521:-1:exon

CCNB1IP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(468027..491527)
location: region:468027-491527:-1
so has part: feature:468027-491527:-1:exon
subclass of: SO_0000010

100483393
type: Gene
SIO_000068: ncbigene

position:468027:-1
position: 468027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:491527:-1
position: 491527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:468027-491527:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_034648492.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..481460,484226..484405,487893..487920,488683..488739,490927..491527))
location: region:468027-491527:-1
so has part: feature:490927-491527:-1:exon
so has part: feature:488683-488739:-1:exon
so has part: feature:487893-487920:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:480166-481460:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:490927-491527:-1:exon

position:490927:-1
position: 490927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:488683-488739:-1:exon

position:488683:-1
position: 488683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:488739:-1
position: 488739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:487893-487920:-1:exon

position:487893:-1
position: 487893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:487920:-1
position: 487920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:484226-484405:-1:exon

position:484226:-1
position: 484226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484405:-1
position: 484405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480166-481460:-1:exon

position:480166:-1
position: 480166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481460:-1
position: 481460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:477448-477523:-1:exon

position:477448:-1
position: 477448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:477523:-1
position: 477523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:474029-474361:-1:exon

position:474029:-1
position: 474029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474361:-1
position: 474361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:470982-471315:-1:exon

position:470982:-1
position: 470982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:471315:-1
position: 471315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:468027-468999:-1:exon

position:468999:-1
position: 468999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034648493.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..481460,484226..484405,487473..487543))
location: region:468027-487543:-1
so has part: feature:487473-487543:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:480166-481460:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

position:487543:-1
position: 487543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487473-487543:-1:exon

position:487473:-1
position: 487473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480166-481460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_034648503.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,484230..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484230-484405:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

position:487489:-1
position: 487489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

position:487389:-1
position: 487389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:484230-484405:-1:exon

position:484230:-1
position: 484230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XM_011237562.3
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,484226..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034648499.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..480231,484226..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:480166-480231:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480166-480231:-1:exon

position:480231:-1
position: 480231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034648498.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..480231,481360..481460,484226..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:481360-481460:-1:exon
so has part: feature:480166-480231:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481360-481460:-1:exon

position:481360:-1
position: 481360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480166-480231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034648502.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,478421..478526,480166..480231,481360..481460,484226..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:481360-481460:-1:exon
so has part: feature:480166-480231:-1:exon
so has part: feature:478421-478526:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481360-481460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480166-480231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478421-478526:-1:exon

position:478421:-1
position: 478421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:478526:-1
position: 478526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034648497.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..480231,481043..481460,484226..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:481043-481460:-1:exon
so has part: feature:480166-480231:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481043-481460:-1:exon

position:481043:-1
position: 481043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:480166-480231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034648500.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,478421..478526,480166..480231,481043..481460,484226..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:481043-481460:-1:exon
so has part: feature:480166-480231:-1:exon
so has part: feature:478421-478526:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:481043-481460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480166-480231:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:478421-478526:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_034648496.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,478421..478526,480166..481460,484226..484405,487389..487489))
location: region:468027-487489:-1
so has part: feature:487389-487489:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:480166-481460:-1:exon
so has part: feature:478421-478526:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:487389-487489:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480166-481460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:478421-478526:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034648494.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..481460,484226..484405,484855..485071))
location: region:468027-485071:-1
so has part: feature:484855-485071:-1:exon
so has part: feature:484226-484405:-1:exon
so has part: feature:480166-481460:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

position:485071:-1
position: 485071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:484855-485071:-1:exon

position:484855:-1
position: 484855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:484226-484405:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480166-481460:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_019810216.2
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..480231,481629..482993))
location: region:468027-482993:-1
so has part: feature:481629-482993:-1:exon
so has part: feature:480166-480231:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

position:482993:-1
position: 482993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481629-482993:-1:exon

position:481629:-1
position: 481629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:480166-480231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034648504.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,478421..478526,480166..480231,481629..482993))
location: region:468027-482993:-1
so has part: feature:481629-482993:-1:exon
so has part: feature:480166-480231:-1:exon
so has part: feature:478421-478526:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481629-482993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480166-480231:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:478421-478526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CCNB1IP1
product: cyclin B1 interacting protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_034648495.1
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468027..468999,470982..471315,474029..474361,477448..477523,480166..481460,481629..482993))
location: region:468027-482993:-1
so has part: feature:481629-482993:-1:exon
so has part: feature:480166-481460:-1:exon
so has part: feature:477448-477523:-1:exon
so has part: feature:474029-474361:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468027-468999:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481629-482993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:480166-481460:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:477448-477523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:474029-474361:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:468027-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_019665775.1
type: Protein
SIO_000068: ncbiprotein

position:468797:-1
position: 468797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:474325:-1
position: 474325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504383.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504384.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504385.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504386.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504387.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504388.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504389.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504390.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504391.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504393.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504394.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_034504395.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

CCNB1IP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: CCNB1IP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: E3 ubiquitin-protein ligase CCNB1IP1
translation: MSLCEDMLLCNYRKCRLKLSGYAWVTACSHIFCDQHGSGEFSRSPAICPACNSTLSGKLDIVRTELSPSEEYKAMVLAGLRPEVVLDISSRALAFWTYQVHQERLYQEYNFSKAEGHLKQVEKIYTQQIQSKDVELTSMKGEVTSMKKVLEEYKKKFSDISEKLMERNRQYQKLQGLYDSLRLRNITIANQESTLEPSMIAQSGVFGFPLGNNSKYPLDSTPVRNRGGGDGDFHFRPFFVGSPTAPEPSNSFFSFASPSRELEQQQISSRAFKVKRI
SIO_010081: CCNB1IP1
subclass of: SO_0000673
so part of: CCNB1IP1
location: complement(join(468797..468999,470982..471315,474029..474325))
location: region:468797-474325:-1
so has part: feature:474029-474325:-1:exon
so has part: feature:470982-471315:-1:exon
so has part: feature:468797-468999:-1:exon

XP_011235864.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:474029-474325:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:470982-471315:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:468797-468999:-1:exon

LOC117797345
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797345
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(479061..479210)
location: region:479061-479210:-1
so has part: feature:479061-479210:-1:exon
subclass of: SO_0000578

117797345
type: Gene
SIO_000068: ncbigene

position:479061:-1
position: 479061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:479210:-1
position: 479210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:479061-479210:-1:exon

LOC117797345
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: snoRNA
gene: LOC117797345
product: small nucleolar RNA SNORA79
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00600
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004622274.1
SIO_010081: LOC117797345
subclass of: SO_0000673
so part of: LOC117797345
location: complement(479061..479210)
location: region:479061-479210:-1
so has part: feature:479061-479210:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:479061-479210:-1:exon

LOC117797347
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797347
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(481116..481192)
location: region:481116-481192:-1
so has part: feature:481116-481192:-1:exon
subclass of: SO_0000578

117797347
type: Gene
SIO_000068: ncbigene

position:481116:-1
position: 481116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:481192:-1
position: 481192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:481116-481192:-1:exon

LOC117797347
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: snoRNA
gene: LOC117797347
product: small nucleolar RNA SNORD126
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01168
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004622275.1
SIO_010081: LOC117797347
subclass of: SO_0000673
so part of: LOC117797347
location: complement(481116..481192)
location: region:481116-481192:-1
so has part: feature:481116-481192:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:481116-481192:-1:exon

PARP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: PARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 491661..500758
location: region:491661-500758:1
so has part: feature:491661-500758:1:exon
subclass of: SO_0000010

100483143
type: Gene
SIO_000068: ncbigene

position:491661:1
position: 491661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500758:1
position: 500758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491661-500758:1:exon

PARP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: PARP2
product: poly(ADP-ribose) polymerase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_002929515.4
SIO_010081: PARP2
subclass of: SO_0000673
so part of: PARP2
location: join(491661..491803,492718..492870,493179..493249,493857..493907,494128..494224,494654..494729,495375..495477,496218..496377,496633..496771,498047..498110,498187..498321,498696..498823,498975..499074,499908..500006,500246..500370,500489..500758)
location: region:491661-500758:1
so has part: feature:491661-491803:1:exon
so has part: feature:492718-492870:1:exon
so has part: feature:493179-493249:1:exon
so has part: feature:493857-493907:1:exon
so has part: feature:494128-494224:1:exon
so has part: feature:494654-494729:1:exon
so has part: feature:495375-495477:1:exon
so has part: feature:496218-496377:1:exon
so has part: feature:496633-496771:1:exon
so has part: feature:498047-498110:1:exon
so has part: feature:498187-498321:1:exon
so has part: feature:498696-498823:1:exon
so has part: feature:498975-499074:1:exon
so has part: feature:499908-500006:1:exon
so has part: feature:500246-500370:1:exon
so has part: feature:500489-500758:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:491661-491803:1:exon

position:491803:1
position: 491803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:492718-492870:1:exon

position:492718:1
position: 492718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:492870:1
position: 492870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:493179-493249:1:exon

position:493179:1
position: 493179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493249:1
position: 493249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:493857-493907:1:exon

position:493857:1
position: 493857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:493907:1
position: 493907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:494128-494224:1:exon

position:494128:1
position: 494128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494224:1
position: 494224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:494654-494729:1:exon

position:494654:1
position: 494654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:494729:1
position: 494729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:495375-495477:1:exon

position:495375:1
position: 495375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:495477:1
position: 495477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:496218-496377:1:exon

position:496218:1
position: 496218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496377:1
position: 496377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:496633-496771:1:exon

position:496633:1
position: 496633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496771:1
position: 496771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:498047-498110:1:exon

position:498047:1
position: 498047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498110:1
position: 498110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:498187-498321:1:exon

position:498187:1
position: 498187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498321:1
position: 498321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:498696-498823:1:exon

position:498696:1
position: 498696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:498823:1
position: 498823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:498975-499074:1:exon

position:498975:1
position: 498975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499074:1
position: 499074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:499908-500006:1:exon

position:499908:1
position: 499908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500006:1
position: 500006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:500246-500370:1:exon

position:500246:1
position: 500246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500370:1
position: 500370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:500489-500758:1:exon

position:500489:1
position: 500489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PARP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: PARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly [ADP-ribose] polymerase 2 isoform X1
translation: MAARRRGTRSGGARASNEAGRVHNGNTAIEDPPPAKKTRRCQRQGVKKEPVTGGEANNDRTEDKQESVKTLLLKGKAPVDPECTAKVGKAHVYCEGNDVYDVMLNQTNLQFNNNKYYLIQLLEDDAQRHFSVWMRWGRVGKMGQHSLVACSGDLNKAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLEMDYTTNTQSEEESKKESLQSPLKPESQLDLRVQELIELICNVQAMEEMMVEMKYDTKKAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHGRALMEACNEFYTRIPHDFGLRTPPLIRTEKELSDKVQLLETLGDIEIAIKLVKTELQSPEHPLDQHYRKLHCALRPLDYESYEFKVISQYLQSTHAPTHRDYTMTLLDVFEVEKEGEKEAFREDLHNRMLLWHGSRLSNWVGILSHGLRIAPPDAPITGYMFGKGIYFADMSSKSANYCFASRVKDTGLLLLSEVALGQCNELLEANPEAEELLRGKHSTKGLGKMAPSPASFITLNGSTVPLGPASDTGILNPEGYTLNYNEFIVYSPNQVRMRYLLKVRFNFLQLW
SIO_010081: PARP2
subclass of: SO_0000673
so part of: PARP2
location: join(491761..491803,492718..492870,493179..493249,493857..493907,494128..494224,494654..494729,495375..495477,496218..496377,496633..496771,498047..498110,498187..498321,498696..498823,498975..499074,499908..500006,500246..500370,500489..500648)
location: region:491761-500648:1
so has part: feature:491761-491803:1:exon
so has part: feature:492718-492870:1:exon
so has part: feature:493179-493249:1:exon
so has part: feature:493857-493907:1:exon
so has part: feature:494128-494224:1:exon
so has part: feature:494654-494729:1:exon
so has part: feature:495375-495477:1:exon
so has part: feature:496218-496377:1:exon
so has part: feature:496633-496771:1:exon
so has part: feature:498047-498110:1:exon
so has part: feature:498187-498321:1:exon
so has part: feature:498696-498823:1:exon
so has part: feature:498975-499074:1:exon
so has part: feature:499908-500006:1:exon
so has part: feature:500246-500370:1:exon
so has part: feature:500489-500648:1:exon

XP_002929561.1
type: Protein
SIO_000068: ncbiprotein

position:491761:1
position: 491761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500648:1
position: 500648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:491761-491803:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:492718-492870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493179-493249:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:493857-493907:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494128-494224:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:494654-494729:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495375-495477:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:496218-496377:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:496633-496771:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498047-498110:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:498187-498321:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498696-498823:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:498975-499074:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:499908-500006:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:500246-500370:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:500489-500648:1:exon

PARP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: PARP2
product: poly(ADP-ribose) polymerase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034648319.1
SIO_010081: PARP2
subclass of: SO_0000673
so part of: PARP2
location: join(492743..492884,493179..493249,493857..493907,494128..494224,494654..494729,495375..495477,496218..496377,496633..496771,498047..498110,498187..498321,498696..498823,498975..499074,499908..500006,500246..500370,500489..500758)
location: region:492743-500758:1
so has part: feature:492743-492884:1:exon
so has part: feature:493179-493249:1:exon
so has part: feature:493857-493907:1:exon
so has part: feature:494128-494224:1:exon
so has part: feature:494654-494729:1:exon
so has part: feature:495375-495477:1:exon
so has part: feature:496218-496377:1:exon
so has part: feature:496633-496771:1:exon
so has part: feature:498047-498110:1:exon
so has part: feature:498187-498321:1:exon
so has part: feature:498696-498823:1:exon
so has part: feature:498975-499074:1:exon
so has part: feature:499908-500006:1:exon
so has part: feature:500246-500370:1:exon
so has part: feature:500489-500758:1:exon

position:492743:1
position: 492743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492743-492884:1:exon

position:492884:1
position: 492884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:493179-493249:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:493857-493907:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:494128-494224:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:494654-494729:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495375-495477:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:496218-496377:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:496633-496771:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:498047-498110:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:498187-498321:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:498696-498823:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:498975-499074:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:499908-500006:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:500246-500370:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:500489-500758:1:exon

TEP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(492884..541761)
location: region:492884-541761:-1
so has part: feature:492884-541761:-1:exon
subclass of: SO_0000010

100482890
type: Gene
SIO_000068: ncbigene

position:492884:-1
position: 492884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541761:-1
position: 541761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:492884-541761:-1:exon

TEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TEP1
product: telomerase associated protein 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034648318.1
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(492884..493647,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523954,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537896,540605..540664))
location: region:492884-540664:-1
so has part: feature:540605-540664:-1:exon
so has part: feature:537414-537896:-1:exon
so has part: feature:536146-536328:-1:exon
so has part: feature:535704-535838:-1:exon
so has part: feature:534830-534991:-1:exon
so has part: feature:534253-534414:-1:exon
so has part: feature:533863-533940:-1:exon
so has part: feature:532167-532291:-1:exon
so has part: feature:531809-531966:-1:exon
so has part: feature:528783-528892:-1:exon
so has part: feature:528202-528292:-1:exon
so has part: feature:527786-527972:-1:exon
so has part: feature:524871-525042:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:540605-540664:-1:exon

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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 12
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
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SIO_000300: 18
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SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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urn:…
SIO_000300: 22
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SIO_000300: 23
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SIO_000300: 24
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SIO_000300: 25
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urn:…
SIO_000300: 26
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SIO_000300: 27
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SIO_000300: 28
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SIO_000300: 29
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urn:…
SIO_000300: 30
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urn:…
SIO_000300: 31
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urn:…
SIO_000300: 32
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urn:…
SIO_000300: 33
SIO_000628: feature:515443-515566:-1:exon

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urn:…
SIO_000300: 34
SIO_000628: feature:514772-515012:-1:exon

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urn:…
SIO_000300: 35
SIO_000628: feature:514453-514576:-1:exon

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urn:…
SIO_000300: 36
SIO_000628: feature:513496-513617:-1:exon

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urn:…
SIO_000300: 37
SIO_000628: feature:513269-513368:-1:exon

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urn:…
SIO_000300: 38
SIO_000628: feature:512904-513059:-1:exon

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urn:…
SIO_000300: 39
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urn:…
SIO_000300: 40
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SIO_000300: 41
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urn:…
SIO_000300: 42
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SIO_000300: 43
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SIO_000300: 44
SIO_000628: feature:509578-509685:-1:exon

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SIO_000300: 45
SIO_000628: feature:509080-509212:-1:exon

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SIO_000300: 46
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SIO_000300: 47
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SIO_000300: 48
SIO_000628: feature:508411-508547:-1:exon

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SIO_000300: 49
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SIO_000300: 50
SIO_000628: feature:506937-507080:-1:exon

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SIO_000300: 51
SIO_000628: feature:506685-506784:-1:exon

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SIO_000300: 52
SIO_000628: feature:505461-505566:-1:exon

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urn:…
SIO_000300: 53
SIO_000628: feature:505151-505356:-1:exon

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SIO_000300: 54
SIO_000628: feature:504925-505029:-1:exon

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urn:…
SIO_000300: 55
SIO_000628: feature:492884-493647:-1:exon

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TEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase protein component 1 isoform X5
translation: MEKLQGHASSHLDILSLENRCLATLPNLQPMKKPHGHVSAHPDILSLENQCLATLPDLKTMEKPHGHVSAHPDILSLENRCLATLPVLKSTVSASPLLHCLQRAPLVQAALRSLPSEPPTWRAQCLSEGLGCLSCPTALKSVSAKERAPETALGRCSSSEEKMPEEKERVEVQMPFYNLSLGEEETLEEPVLKLTAGDSDSHPGPTDQALKDKKMVLISLLCSTLTSKGNIEDAADPTSGTLFEVCSELAPLEPEFILKASLYARQQLNIRTVANKVLAIAAFLPVCRPHLRRYFCAIVQLPSDWLQVAEFYEKLAGGEEDKLVPLPACLRAAMTDKFAQFDEYQLAKYNPRKHRAKRRPRPPPRPPKTGRPFSETQKYLPRYLRPLKDEQKKFEETYNAVPERKQQPRFTLKKLVRRLHIREPAQHVQALLGYRYPSNLQMFSRSRLPGAWDASRAGKRMKLPRPETWERELSLRGNKASVWEELIDSGKLPFMAMLRNLCNLLRAGISARHHELVLQRLQHENSVIHSRQFPFRFLNAHDSIHDLEARLKSKALPPPSNTKLIRSIMTRNAKKDRNWTYRRYPHPPSRRQLRTTMMMPVIYEQLKWEKLKIQKASRRGKYDGEMMARYRQALETAVNISAKHNLPPLPGRTVLVYLTDMGTDELCRKSTLQGRPINYVLLLIGMMIARAEQVDLLLCGRGTMKTAVFKAEEGILKTAGTLLAQVQQGTGDSFLQDLDEEGEWSVNTFGKYLLSLAAQRVPVDRVILFGNTMYNRLVNEAKQLFWQHVNSKCLFVALPLGRTCDTLPDSNPNNVTLSGYTDGILKFIAERGASRLLEHVGQMDKIFKVPPPPGKTGDLSLRPLEENTLSPLAPISQPRWRSVRLFISSTFRDMHGERDLLLRSVLPALQARAAPHCISLHAIDLRWGVTEEETRRNRQLEVCLGEVENAQLFVGILGSRYGHVPPNYNLPDHPHFRWAQQYPAGRSVTEMEVMQFLDRRLRLRLQPSAQALLYFRDSGFLRSVPDAWKSDLTSESEEAARRISELKSFLSRQQGVTCRRYSCEWGGVAAGRPYAGGLEEFGQLVLQDVWNMIQQLYLQPGAQLEQPASIADDDLVQATFQQLQNPPSPARPHLLRDTVKQLMLRRERLSLVTGQSGQGKTAFLASLVSALRAPDGAKVAPFIFFHFSGARPDQGLALTLLRRLCAYLHCQLRKPSALPTTYRGLVWEIQQRLLPEYAQSLRSGQTLVLIIDGADRLVDQHGQPVSDWIPKTLPPRVHLVLSVSTDAGLGDTLEQSQRAHVVALGPLEPSARARLVREELALYGKRLEESPFNNQMRLLLVKRGSSLPLYLRLVTDHLRLYTLYEQVSERLRTLPATVPLLLQHILGTLEKEHGPDVLPQALATLEATRSGLTVDQLHAVLSAWRILPRGAKSWEEAVAAGSSGEPYPMGPFAYLVQSLRSLLGEGPLERAGARLCLPAGPLRTAAQCRYGKRLGLEKTAHILIAAQLWKTCDPEASGTFQNCLPEALADLPYHLLQSGNRGLLAKFLTNIHVVAAHLELGLVSRLLEAHALYDEITSSVPKDEQSLPEADVAVFHTFLRQQAPVLSQYPLLLPQQAANQPLDSPLCRQAPQLSRRWRLQHVLRWLNKPHTMEGQQSSSLSLAVSSSPTAVALSPSGQRAAVGTASGMVYLLDLRTWQEKSLVSGCDGVSSCSFLSDNALFLTAFDGLLELWDLQQGCRVLQTSAHKYQITGCCLSPDRRLLATVCLGGCLKLWDTVRGQLAFQHAGPRPLNCVAFHPEGQMVAVGSWAGSFSLFHVDGLKAAKDLGAPGASVRTVAFSVPGRVVAVGRLDGMVELWSWHEGAQLAAFPAHHGIVATALFLRAGRQLLTAGEDGKVQVWSGSLGRPRGCLGSLSLSPALSVALSPDGDRVAIGYRADGIRIYKIASGSQGAQCQALDVAVSALVWLSPKVLVSGAEDGSLQGWALKESSLQSLWLLSRYQ…
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(493636..493647,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523954,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537872))
location: region:493636-537872:-1
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XP_034504209.1
type: Protein
SIO_000068: ncbiprotein

position:493636:-1
position: 493636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:537872:-1
position: 537872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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SIO_000628: feature:537414-537872:-1:exon

urn:…
SIO_000300: 2
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SIO_000628: feature:534830-534991:-1:exon

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urn:…
SIO_000300: 6
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urn:…
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SIO_000628: feature:493636-493647:-1:exon

PARP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: PARP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly [ADP-ribose] polymerase 2 isoform X2
translation: MLNQTNLQFNNNKYYLIQLLEDDAQRHFSVWMRWGRVGKMGQHSLVACSGDLNKAKEIFQKKFLDKTKNNWEDREKFEKVPGKYDMLEMDYTTNTQSEEESKKESLQSPLKPESQLDLRVQELIELICNVQAMEEMMVEMKYDTKKAPLGKLTVAQIKAGYQSLKKIEDCIRAGQHGRALMEACNEFYTRIPHDFGLRTPPLIRTEKELSDKVQLLETLGDIEIAIKLVKTELQSPEHPLDQHYRKLHCALRPLDYESYEFKVISQYLQSTHAPTHRDYTMTLLDVFEVEKEGEKEAFREDLHNRMLLWHGSRLSNWVGILSHGLRIAPPDAPITGYMFGKGIYFADMSSKSANYCFASRVKDTGLLLLSEVALGQCNELLEANPEAEELLRGKHSTKGLGKMAPSPASFITLNGSTVPLGPASDTGILNPEGYTLNYNEFIVYSPNQVRMRYLLKVRFNFLQLW
SIO_010081: PARP2
subclass of: SO_0000673
so part of: PARP2
location: join(493896..493907,494128..494224,494654..494729,495375..495477,496218..496377,496633..496771,498047..498110,498187..498321,498696..498823,498975..499074,499908..500006,500246..500370,500489..500648)
location: region:493896-500648:1
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so has part: feature:499908-500006:1:exon
so has part: feature:500246-500370:1:exon
so has part: feature:500489-500648:1:exon

XP_034504210.1
type: Protein
SIO_000068: ncbiprotein

position:493896:1
position: 493896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:493896-493907:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:494128-494224:1:exon

urn:…
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SIO_000628: feature:494654-494729:1:exon

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SIO_000300: 4
SIO_000628: feature:495375-495477:1:exon

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SIO_000628: feature:496218-496377:1:exon

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SIO_000628: feature:496633-496771:1:exon

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SIO_000628: feature:498047-498110:1:exon

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SIO_000628: feature:498696-498823:1:exon

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SIO_000300: 10
SIO_000628: feature:498975-499074:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:499908-500006:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:500246-500370:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:500489-500648:1:exon

TEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TEP1
product: telomerase associated protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_019810204.2
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504483..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523954,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537896,541490..541761))
location: region:504483-541761:-1
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so has part: feature:504483-504703:-1:exon

position:504483:-1
position: 504483
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type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541490-541761:-1:exon

position:541490:-1
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urn:…
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urn:…
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TEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TEP1
product: telomerase associated protein 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034648317.1
SIO_010081: TEP1
subclass of: SO_0000673
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TEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TEP1
product: telomerase associated protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034648315.1
SIO_010081: TEP1
subclass of: SO_0000673
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TEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TEP1
product: telomerase associated protein 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_034648316.1
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504483..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523927,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537896,540605..540664))
location: region:504483-540664:-1
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urn:…
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SIO_000628: feature:504925-505029:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:504483-504703:-1:exon

TEP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TEP1
product: telomerase associated protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_019810205.2
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504483..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523954,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537896,540605..540664))
location: region:504483-540664:-1
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urn:…
SIO_000300: 1
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SIO_000300: 40
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urn:…
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urn:…
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SIO_000628: feature:509080-509212:-1:exon

urn:…
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SIO_000628: feature:508686-508818:-1:exon

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urn:…
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urn:…
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SIO_000628: feature:506685-506784:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:504925-505029:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:504483-504703:-1:exon

TEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase protein component 1 isoform X4
translation: MEKLQGHASSHLDILSLENRCLATLPNLQPMKKPHGHVSAHPDILSLENQCLATLPDLKTMEKPHGHVSAHPDILSLENRCLATLPVLKSTVSASPLLHCLQRAPLVQAALRSLPSEPPTWRAQCLSEGLGCLSCPTALKSVSAKERAPETALGRCSSSEEKMPEEKERVEVQMPFYNLSLGEEETLEEPVLKLTAGDSDSHPGPTDQALKDKKMVLISLLCSTLTSKGNIEDAADPTSGTLFEVCSELAPLEPEFILKASLYARQQLNIRTVANKVLAIAAFLPVCRPHLRRYFCAIVQLPSDWLQVAEFYEKLAGGEEDKLVPLPACLRAAMTDKFAQFDEYQLAKYNPRKHRAKRRPRPPPRPPKTGRPFSETQKYLPRYLRPLKDEQKKFEETYNAVPERKQQPRFTLKKLVRRLHIREPAQHVQALLGYRYPSNLQMFSRSRLPGAWDASRAGKRMKLPRPETWERELSLRGNKASVWEELIDSGKLPFMAMLRNLCNLLRAGISARHHELVLQRLQHENSVIHSRQFPFRFLNAHDSIHDLEARLKSKALPPPSNTKLIRSIMTRNAKKDRNWTYRRYPHPPSRRQLRTTMMMPVIYEQLKWEKLKIQKARRGKYDGEMMARYRQALETAVNISAKHNLPPLPGRTVLVYLTDMGTDELCRKSTLQGRPINYVLLLIGMMIARAEQVDLLLCGRGTMKTAVFKAEEGILKTAGTLLAQVQDLDEEGEWSVNTFGKYLLSLAAQRVPVDRVILFGNTMYNRLVNEAKQLFWQHVNSKCLFVALPLGRTCDTLPDSNPNNVTLSGYTDGILKFIAERGASRLLEHVGQMDKIFKVPPPPGKTGDLSLRPLEENTLSPLAPISQPRWRSVRLFISSTFRDMHGERDLLLRSVLPALQARAAPHCISLHAIDLRWGVTEEETRRNRQLEVCLGEVENAQLFVGILGSRYGHVPPNYNLPDHPHFRWAQQYPAGRSVTEMEVMQFLDRRLRLRLQPSAQALLYFRDSGFLRSVPDAWKSDLTSESEEAARRISELKSFLSRQQGVTCRRYSCEWGGVAAGRPYAGGLEEFGQLVLQDVWNMIQQLYLQPGAQLEQPASIADDDLVQATFQQLQNPPSPARPHLLRDTVKQLMLRRERLSLVTGQSGQGKTAFLASLVSALRAPDGAKVAPFIFFHFSGARPDQGLALTLLRRLCAYLHCQLRKPSALPTTYRGLVWEIQQRLLPEYAQSLRSGQTLVLIIDGADRLVDQHGQPVSDWIPKTLPPRVHLVLSVSTDAGLGDTLEQSQRAHVVALGPLEPSARARLVREELALYGKRLEESPFNNQMRLLLVKRGSSLPLYLRLVTDHLRLYTLYEQVSERLRTLPATVPLLLQHILGTLEKEHGPDVLPQALATLEATRSGLTVDQLHAVLSAWRILPRGAKSWEEAVAAGSSGEPYPMGPFAYLVQSLRSLLGEGPLERAGARLCLPAGPLRTAAQCRYGKRLGLEKTAHILIAAQLWKTCDPEASGTFQNCLPEALADLPYHLLQSGNRGLLAKFLTNIHVVAAHLELGLVSRLLEAHALYDEITSSVPKDEQSLPEADVAVFHTFLRQQAPVLSQYPLLLPQQAANQPLDSPLCRQAPQLSRRWRLQHVLRWLNKPHTMEGQQSSSLSLAVSSSPTAVALSPSGQRAAVGTASGMVYLLDLRTWQEKSLVSGCDGVSSCSFLSDNALFLTAFDGLLELWDLQQGCRVLQTSAHKYQITGCCLSPDRRLLATVCLGGCLKLWDTVRGQLAFQHAGPRPLNCVAFHPEGQMVAVGSWAGSFSLFHVDGLKAAKDLGAPGASVRTVAFSVPGRVVAVGRLDGMVELWSWHEGAQLAAFPAHHGIVATALFLRAGRQLLTAGEDGKVQVWSGSLGRPRGCLGSLSLSPALSVALSPDGDRVAIGYRADGIRIYKIASGSQGAQCQALDVAVSALVWLSPKVLVSGAEDGSLQGWALKESSLQSLWLLSRYQKPVLGLATSS…
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504581..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523927,524097..524255,524871..525039,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537872))
location: region:504581-537872:-1
so has part: feature:537414-537872:-1:exon
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so has part: feature:518057-518213:-1:exon
so has part: feature:517769-517948:-1:exon
so has part: feature:517228-517320:-1:exon
so has part: feature:516802-516934:-1:exon
so has part: feature:516492-516642:-1:exon
so has part: feature:516103-516236:-1:exon
so has part: feature:515808-515896:-1:exon
so has part: feature:515443-515566:-1:exon
so has part: feature:514772-515012:-1:exon
so has part: feature:514453-514576:-1:exon
so has part: feature:513496-513617:-1:exon
so has part: feature:513269-513368:-1:exon
so has part: feature:512904-513059:-1:exon
so has part: feature:512547-512759:-1:exon
so has part: feature:512145-512298:-1:exon
so has part: feature:511825-512037:-1:exon
so has part: feature:511075-511235:-1:exon
so has part: feature:510719-510832:-1:exon
so has part: feature:509578-509685:-1:exon
so has part: feature:509080-509212:-1:exon
so has part: feature:508924-509000:-1:exon
so has part: feature:508686-508818:-1:exon
so has part: feature:508411-508547:-1:exon
so has part: feature:508145-508269:-1:exon
so has part: feature:506937-507080:-1:exon
so has part: feature:506685-506784:-1:exon
so has part: feature:505461-505566:-1:exon
so has part: feature:505151-505356:-1:exon
so has part: feature:504925-505029:-1:exon
so has part: feature:504581-504703:-1:exon

XP_034504208.1
type: Protein
SIO_000068: ncbiprotein

position:504581:-1
position: 504581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:537414-537872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536146-536328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535704-535838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534830-534991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534253-534414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533863-533940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532167-532291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531809-531966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528783-528892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527786-527972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524871-525039:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524097-524255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523850-523927:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522750-522880:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522387-522446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:521367-521525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:520580-520756:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:520258-520378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:519538-519668:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:519165-519278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:518957-519074:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:518606-518800:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:518312-518487:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:518057-518213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517769-517948:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517228-517320:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:516802-516934:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:516492-516642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:516103-516236:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:515808-515896:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:515443-515566:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:514772-515012:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:514453-514576:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:513496-513617:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:513269-513368:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:512904-513059:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:512547-512759:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:512145-512298:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:511825-512037:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:511075-511235:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:510719-510832:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:509578-509685:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:509080-509212:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:508924-509000:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:508686-508818:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:508411-508547:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:508145-508269:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:506937-507080:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:506685-506784:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:505461-505566:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:505151-505356:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:504925-505029:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:504581-504703:-1:exon

TEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase protein component 1 isoform X2
translation: MEKLQGHASSHLDILSLENRCLATLPNLQPMKKPHGHVSAHPDILSLENQCLATLPDLKTMEKPHGHVSAHPDILSLENRCLATLPVLKSTVSASPLLHCLQRAPLVQAALRSLPSEPPTWRAQCLSEGLGCLSCPTALKSVSAKERAPETALGRCSSSEEKMPEEKERVEVQMPFYNLSLGEEETLEEPVLKLTAGDSDSHPGPTDQALKDKKMVLISLLCSTLTSKGNIEDAADPTSGTLFEVCSELAPLEPEFILKASLYARQQLNIRTVANKVLAIAAFLPVCRPHLRRYFCAIVQLPSDWLQVAEFYEKLAGGEEDKLVPLPACLRAAMTDKFAQFDEYQLAKYNPRKHRAKRRPRPPPRPPKTGRPFSETQKYLPRYLRPLKDEQKKFEETYNAVPERKQQPRFTLKKLVRRLHIREPAQHVQALLGYRYPSNLQMFSRSRLPGAWDASRAGKRMKLPRPETWERELSLRGNKASVWEELIDSGKLPFMAMLRNLCNLLRAGISARHHELVLQRLQHENSVIHSRQFPFRFLNAHDSIHDLEARLKSKALPPPSNTKLIRSIMTRNAKKDRNWTYRRYPHPPSRRQLRTTMMMPVIYEQLKWEKLKIQKARRGKYDGEMMARYRQALETAVNISAKHNLPPLPGRTVLVYLTDMGTDELCRKSTLQGRPINYVLLLIGMMIARAEQVDLLLCGRGTMKTAVFKAEEGILKTAGTLLAQVQQGTGDSFLQDLDEEGEWSVNTFGKYLLSLAAQRVPVDRVILFGNTMYNRLVNEAKQLFWQHVNSKCLFVALPLGRTCDTLPDSNPNNVTLSGYTDGILKFIAERGASRLLEHVGQMDKIFKVPPPPGKTGDLSLRPLEENTLSPLAPISQPRWRSVRLFISSTFRDMHGERDLLLRSVLPALQARAAPHCISLHAIDLRWGVTEEETRRNRQLEVCLGEVENAQLFVGILGSRYGHVPPNYNLPDHPHFRWAQQYPAGRSVTEMEVMQFLDRRLRLRLQPSAQALLYFRDSGFLRSVPDAWKSDLTSESEEAARRISELKSFLSRQQGVTCRRYSCEWGGVAAGRPYAGGLEEFGQLVLQDVWNMIQQLYLQPGAQLEQPASIADDDLVQATFQQLQNPPSPARPHLLRDTVKQLMLRRERLSLVTGQSGQGKTAFLASLVSALRAPDGAKVAPFIFFHFSGARPDQGLALTLLRRLCAYLHCQLRKPSALPTTYRGLVWEIQQRLLPEYAQSLRSGQTLVLIIDGADRLVDQHGQPVSDWIPKTLPPRVHLVLSVSTDAGLGDTLEQSQRAHVVALGPLEPSARARLVREELALYGKRLEESPFNNQMRLLLVKRGSSLPLYLRLVTDHLRLYTLYEQVSERLRTLPATVPLLLQHILGTLEKEHGPDVLPQALATLEATRSGLTVDQLHAVLSAWRILPRGAKSWEEAVAAGSSGEPYPMGPFAYLVQSLRSLLGEGPLERAGARLCLPAGPLRTAAQCRYGKRLGLEKTAHILIAAQLWKTCDPEASGTFQNCLPEALADLPYHLLQSGNRGLLAKFLTNIHVVAAHLELGLVSRLLEAHALYDEITSSVPKDEQSLPEADVAVFHTFLRQQAPVLSQYPLLLPQQAANQPLDSPLCRQAPQLSRRWRLQHVLRWLNKPHTMEGQQSSSLSLAVSSSPTAVALSPSGQRAAVGTASGMVYLLDLRTWQEKSLVSGCDGVSSCSFLSDNALFLTAFDGLLELWDLQQGCRVLQTSAHKYQITGCCLSPDRRLLATVCLGGCLKLWDTVRGQLAFQHAGPRPLNCVAFHPEGQMVAVGSWAGSFSLFHVDGLKAAKDLGAPGASVRTVAFSVPGRVVAVGRLDGMVELWSWHEGAQLAAFPAHHGIVATALFLRAGRQLLTAGEDGKVQVWSGSLGRPRGCLGSLSLSPALSVALSPDGDRVAIGYRADGIRIYKIASGSQGAQCQALDVAVSALVWLSPKVLVSGAEDGSLQGWALKESSLQSLWLLSRYQK…
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504581..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523954,524097..524255,524871..525039,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537872))
location: region:504581-537872:-1
so has part: feature:537414-537872:-1:exon
so has part: feature:536146-536328:-1:exon
so has part: feature:535704-535838:-1:exon
so has part: feature:534830-534991:-1:exon
so has part: feature:534253-534414:-1:exon
so has part: feature:533863-533940:-1:exon
so has part: feature:532167-532291:-1:exon
so has part: feature:531809-531966:-1:exon
so has part: feature:528783-528892:-1:exon
so has part: feature:528202-528292:-1:exon
so has part: feature:527786-527972:-1:exon
so has part: feature:524871-525039:-1:exon
so has part: feature:524097-524255:-1:exon
so has part: feature:523850-523954:-1:exon
so has part: feature:522750-522880:-1:exon
so has part: feature:522387-522446:-1:exon
so has part: feature:521367-521525:-1:exon
so has part: feature:520580-520756:-1:exon
so has part: feature:520258-520378:-1:exon
so has part: feature:519538-519668:-1:exon
so has part: feature:519165-519278:-1:exon
so has part: feature:518957-519074:-1:exon
so has part: feature:518606-518800:-1:exon
so has part: feature:518312-518487:-1:exon
so has part: feature:518057-518213:-1:exon
so has part: feature:517769-517948:-1:exon
so has part: feature:517228-517320:-1:exon
so has part: feature:516802-516934:-1:exon
so has part: feature:516492-516642:-1:exon
so has part: feature:516103-516236:-1:exon
so has part: feature:515808-515896:-1:exon
so has part: feature:515443-515566:-1:exon
so has part: feature:514772-515012:-1:exon
so has part: feature:514453-514576:-1:exon
so has part: feature:513496-513617:-1:exon
so has part: feature:513269-513368:-1:exon
so has part: feature:512904-513059:-1:exon
so has part: feature:512547-512759:-1:exon
so has part: feature:512145-512298:-1:exon
so has part: feature:511825-512037:-1:exon
so has part: feature:511075-511235:-1:exon
so has part: feature:510719-510832:-1:exon
so has part: feature:509578-509685:-1:exon
so has part: feature:509080-509212:-1:exon
so has part: feature:508924-509000:-1:exon
so has part: feature:508686-508818:-1:exon
so has part: feature:508411-508547:-1:exon
so has part: feature:508145-508269:-1:exon
so has part: feature:506937-507080:-1:exon
so has part: feature:506685-506784:-1:exon
so has part: feature:505461-505566:-1:exon
so has part: feature:505151-505356:-1:exon
so has part: feature:504925-505029:-1:exon
so has part: feature:504581-504703:-1:exon

XP_034504206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537414-537872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536146-536328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535704-535838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534830-534991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534253-534414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533863-533940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532167-532291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531809-531966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528783-528892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527786-527972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524871-525039:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524097-524255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523850-523954:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522750-522880:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522387-522446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:521367-521525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:520580-520756:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:520258-520378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:519538-519668:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:519165-519278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:518957-519074:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:518606-518800:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:518312-518487:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:518057-518213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517769-517948:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517228-517320:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:516802-516934:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:516492-516642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:516103-516236:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:515808-515896:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:515443-515566:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:514772-515012:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:514453-514576:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:513496-513617:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:513269-513368:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:512904-513059:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:512547-512759:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:512145-512298:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:511825-512037:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:511075-511235:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:510719-510832:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:509578-509685:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:509080-509212:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:508924-509000:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:508686-508818:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:508411-508547:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:508145-508269:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:506937-507080:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:506685-506784:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:505461-505566:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:505151-505356:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:504925-505029:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:504581-504703:-1:exon

TEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase protein component 1 isoform X3
translation: MEKLQGHASSHLDILSLENRCLATLPNLQPMKKPHGHVSAHPDILSLENQCLATLPDLKTMEKPHGHVSAHPDILSLENRCLATLPVLKSTVSASPLLHCLQRAPLVQAALRSLPSEPPTWRAQCLSEGLGCLSCPTALKSVSAKERAPETALGRCSSSEEKMPEEKERVEVQMPFYNLSLGEEETLEEPVLKLTAGDSDSHPGPTDQALKDKKMVLISLLCSTLTSKGNIEDAADPTSGTLFEVCSELAPLEPEFILKASLYARQQLNIRTVANKVLAIAAFLPVCRPHLRRYFCAIVQLPSDWLQVAEFYEKLAGGEEDKLVPLPACLRAAMTDKFAQFDEYQLAKYNPRKHRAKRRPRPPPRPPKTGRPFSETQKYLPRYLRPLKDEQKKFEETYNAVPERKQQPRFTLKKLVRRLHIREPAQHVQALLGYRYPSNLQMFSRSRLPGAWDASRAGKRMKLPRPETWERELSLRGNKASVWEELIDSGKLPFMAMLRNLCNLLRAGISARHHELVLQRLQHENSVIHSRQFPFRFLNAHDSIHDLEARLKSKALPPPSNTKLIRSIMTRNAKKDRNWTYRRYPHPPSRRQLRTTMMMPVIYEQLKWEKLKIQKASRRGKYDGEMMARYRQALETAVNISAKHNLPPLPGRTVLVYLTDMGTDELCRKSTLQGRPINYVLLLIGMMIARAEQVDLLLCGRGTMKTAVFKAEEGILKTAGTLLAQVQDLDEEGEWSVNTFGKYLLSLAAQRVPVDRVILFGNTMYNRLVNEAKQLFWQHVNSKCLFVALPLGRTCDTLPDSNPNNVTLSGYTDGILKFIAERGASRLLEHVGQMDKIFKVPPPPGKTGDLSLRPLEENTLSPLAPISQPRWRSVRLFISSTFRDMHGERDLLLRSVLPALQARAAPHCISLHAIDLRWGVTEEETRRNRQLEVCLGEVENAQLFVGILGSRYGHVPPNYNLPDHPHFRWAQQYPAGRSVTEMEVMQFLDRRLRLRLQPSAQALLYFRDSGFLRSVPDAWKSDLTSESEEAARRISELKSFLSRQQGVTCRRYSCEWGGVAAGRPYAGGLEEFGQLVLQDVWNMIQQLYLQPGAQLEQPASIADDDLVQATFQQLQNPPSPARPHLLRDTVKQLMLRRERLSLVTGQSGQGKTAFLASLVSALRAPDGAKVAPFIFFHFSGARPDQGLALTLLRRLCAYLHCQLRKPSALPTTYRGLVWEIQQRLLPEYAQSLRSGQTLVLIIDGADRLVDQHGQPVSDWIPKTLPPRVHLVLSVSTDAGLGDTLEQSQRAHVVALGPLEPSARARLVREELALYGKRLEESPFNNQMRLLLVKRGSSLPLYLRLVTDHLRLYTLYEQVSERLRTLPATVPLLLQHILGTLEKEHGPDVLPQALATLEATRSGLTVDQLHAVLSAWRILPRGAKSWEEAVAAGSSGEPYPMGPFAYLVQSLRSLLGEGPLERAGARLCLPAGPLRTAAQCRYGKRLGLEKTAHILIAAQLWKTCDPEASGTFQNCLPEALADLPYHLLQSGNRGLLAKFLTNIHVVAAHLELGLVSRLLEAHALYDEITSSVPKDEQSLPEADVAVFHTFLRQQAPVLSQYPLLLPQQAANQPLDSPLCRQAPQLSRRWRLQHVLRWLNKPHTMEGQQSSSLSLAVSSSPTAVALSPSGQRAAVGTASGMVYLLDLRTWQEKSLVSGCDGVSSCSFLSDNALFLTAFDGLLELWDLQQGCRVLQTSAHKYQITGCCLSPDRRLLATVCLGGCLKLWDTVRGQLAFQHAGPRPLNCVAFHPEGQMVAVGSWAGSFSLFHVDGLKAAKDLGAPGASVRTVAFSVPGRVVAVGRLDGMVELWSWHEGAQLAAFPAHHGIVATALFLRAGRQLLTAGEDGKVQVWSGSLGRPRGCLGSLSLSPALSVALSPDGDRVAIGYRADGIRIYKIASGSQGAQCQALDVAVSALVWLSPKVLVSGAEDGSLQGWALKESSLQSLWLLSRYQKPVLGLATS…
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504581..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523927,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537872))
location: region:504581-537872:-1
so has part: feature:537414-537872:-1:exon
so has part: feature:536146-536328:-1:exon
so has part: feature:535704-535838:-1:exon
so has part: feature:534830-534991:-1:exon
so has part: feature:534253-534414:-1:exon
so has part: feature:533863-533940:-1:exon
so has part: feature:532167-532291:-1:exon
so has part: feature:531809-531966:-1:exon
so has part: feature:528783-528892:-1:exon
so has part: feature:528202-528292:-1:exon
so has part: feature:527786-527972:-1:exon
so has part: feature:524871-525042:-1:exon
so has part: feature:524097-524255:-1:exon
so has part: feature:523850-523927:-1:exon
so has part: feature:522750-522880:-1:exon
so has part: feature:522387-522446:-1:exon
so has part: feature:521367-521525:-1:exon
so has part: feature:520580-520756:-1:exon
so has part: feature:520258-520378:-1:exon
so has part: feature:519538-519668:-1:exon
so has part: feature:519165-519278:-1:exon
so has part: feature:518957-519074:-1:exon
so has part: feature:518606-518800:-1:exon
so has part: feature:518312-518487:-1:exon
so has part: feature:518057-518213:-1:exon
so has part: feature:517769-517948:-1:exon
so has part: feature:517228-517320:-1:exon
so has part: feature:516802-516934:-1:exon
so has part: feature:516492-516642:-1:exon
so has part: feature:516103-516236:-1:exon
so has part: feature:515808-515896:-1:exon
so has part: feature:515443-515566:-1:exon
so has part: feature:514772-515012:-1:exon
so has part: feature:514453-514576:-1:exon
so has part: feature:513496-513617:-1:exon
so has part: feature:513269-513368:-1:exon
so has part: feature:512904-513059:-1:exon
so has part: feature:512547-512759:-1:exon
so has part: feature:512145-512298:-1:exon
so has part: feature:511825-512037:-1:exon
so has part: feature:511075-511235:-1:exon
so has part: feature:510719-510832:-1:exon
so has part: feature:509578-509685:-1:exon
so has part: feature:509080-509212:-1:exon
so has part: feature:508924-509000:-1:exon
so has part: feature:508686-508818:-1:exon
so has part: feature:508411-508547:-1:exon
so has part: feature:508145-508269:-1:exon
so has part: feature:506937-507080:-1:exon
so has part: feature:506685-506784:-1:exon
so has part: feature:505461-505566:-1:exon
so has part: feature:505151-505356:-1:exon
so has part: feature:504925-505029:-1:exon
so has part: feature:504581-504703:-1:exon

XP_034504207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537414-537872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536146-536328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535704-535838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534830-534991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534253-534414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533863-533940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532167-532291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531809-531966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528783-528892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527786-527972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524871-525042:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524097-524255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523850-523927:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522750-522880:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522387-522446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:521367-521525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:520580-520756:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:520258-520378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:519538-519668:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:519165-519278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:518957-519074:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:518606-518800:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:518312-518487:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:518057-518213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517769-517948:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517228-517320:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:516802-516934:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:516492-516642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:516103-516236:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:515808-515896:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:515443-515566:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:514772-515012:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:514453-514576:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:513496-513617:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:513269-513368:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:512904-513059:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:512547-512759:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:512145-512298:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:511825-512037:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:511075-511235:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:510719-510832:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:509578-509685:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:509080-509212:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:508924-509000:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:508686-508818:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:508411-508547:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:508145-508269:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:506937-507080:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:506685-506784:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:505461-505566:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:505151-505356:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:504925-505029:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:504581-504703:-1:exon

TEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase protein component 1 isoform X1
translation: MEKLQGHASSHLDILSLENRCLATLPNLQPMKKPHGHVSAHPDILSLENQCLATLPDLKTMEKPHGHVSAHPDILSLENRCLATLPVLKSTVSASPLLHCLQRAPLVQAALRSLPSEPPTWRAQCLSEGLGCLSCPTALKSVSAKERAPETALGRCSSSEEKMPEEKERVEVQMPFYNLSLGEEETLEEPVLKLTAGDSDSHPGPTDQALKDKKMVLISLLCSTLTSKGNIEDAADPTSGTLFEVCSELAPLEPEFILKASLYARQQLNIRTVANKVLAIAAFLPVCRPHLRRYFCAIVQLPSDWLQVAEFYEKLAGGEEDKLVPLPACLRAAMTDKFAQFDEYQLAKYNPRKHRAKRRPRPPPRPPKTGRPFSETQKYLPRYLRPLKDEQKKFEETYNAVPERKQQPRFTLKKLVRRLHIREPAQHVQALLGYRYPSNLQMFSRSRLPGAWDASRAGKRMKLPRPETWERELSLRGNKASVWEELIDSGKLPFMAMLRNLCNLLRAGISARHHELVLQRLQHENSVIHSRQFPFRFLNAHDSIHDLEARLKSKALPPPSNTKLIRSIMTRNAKKDRNWTYRRYPHPPSRRQLRTTMMMPVIYEQLKWEKLKIQKASRRGKYDGEMMARYRQALETAVNISAKHNLPPLPGRTVLVYLTDMGTDELCRKSTLQGRPINYVLLLIGMMIARAEQVDLLLCGRGTMKTAVFKAEEGILKTAGTLLAQVQQGTGDSFLQDLDEEGEWSVNTFGKYLLSLAAQRVPVDRVILFGNTMYNRLVNEAKQLFWQHVNSKCLFVALPLGRTCDTLPDSNPNNVTLSGYTDGILKFIAERGASRLLEHVGQMDKIFKVPPPPGKTGDLSLRPLEENTLSPLAPISQPRWRSVRLFISSTFRDMHGERDLLLRSVLPALQARAAPHCISLHAIDLRWGVTEEETRRNRQLEVCLGEVENAQLFVGILGSRYGHVPPNYNLPDHPHFRWAQQYPAGRSVTEMEVMQFLDRRLRLRLQPSAQALLYFRDSGFLRSVPDAWKSDLTSESEEAARRISELKSFLSRQQGVTCRRYSCEWGGVAAGRPYAGGLEEFGQLVLQDVWNMIQQLYLQPGAQLEQPASIADDDLVQATFQQLQNPPSPARPHLLRDTVKQLMLRRERLSLVTGQSGQGKTAFLASLVSALRAPDGAKVAPFIFFHFSGARPDQGLALTLLRRLCAYLHCQLRKPSALPTTYRGLVWEIQQRLLPEYAQSLRSGQTLVLIIDGADRLVDQHGQPVSDWIPKTLPPRVHLVLSVSTDAGLGDTLEQSQRAHVVALGPLEPSARARLVREELALYGKRLEESPFNNQMRLLLVKRGSSLPLYLRLVTDHLRLYTLYEQVSERLRTLPATVPLLLQHILGTLEKEHGPDVLPQALATLEATRSGLTVDQLHAVLSAWRILPRGAKSWEEAVAAGSSGEPYPMGPFAYLVQSLRSLLGEGPLERAGARLCLPAGPLRTAAQCRYGKRLGLEKTAHILIAAQLWKTCDPEASGTFQNCLPEALADLPYHLLQSGNRGLLAKFLTNIHVVAAHLELGLVSRLLEAHALYDEITSSVPKDEQSLPEADVAVFHTFLRQQAPVLSQYPLLLPQQAANQPLDSPLCRQAPQLSRRWRLQHVLRWLNKPHTMEGQQSSSLSLAVSSSPTAVALSPSGQRAAVGTASGMVYLLDLRTWQEKSLVSGCDGVSSCSFLSDNALFLTAFDGLLELWDLQQGCRVLQTSAHKYQITGCCLSPDRRLLATVCLGGCLKLWDTVRGQLAFQHAGPRPLNCVAFHPEGQMVAVGSWAGSFSLFHVDGLKAAKDLGAPGASVRTVAFSVPGRVVAVGRLDGMVELWSWHEGAQLAAFPAHHGIVATALFLRAGRQLLTAGEDGKVQVWSGSLGRPRGCLGSLSLSPALSVALSPDGDRVAIGYRADGIRIYKIASGSQGAQCQALDVAVSALVWLSPKVLVSGAEDGSLQGWALKESSLQSLWLLSRYQ…
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504581..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523954,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537872))
location: region:504581-537872:-1
so has part: feature:537414-537872:-1:exon
so has part: feature:536146-536328:-1:exon
so has part: feature:535704-535838:-1:exon
so has part: feature:534830-534991:-1:exon
so has part: feature:534253-534414:-1:exon
so has part: feature:533863-533940:-1:exon
so has part: feature:532167-532291:-1:exon
so has part: feature:531809-531966:-1:exon
so has part: feature:528783-528892:-1:exon
so has part: feature:528202-528292:-1:exon
so has part: feature:527786-527972:-1:exon
so has part: feature:524871-525042:-1:exon
so has part: feature:524097-524255:-1:exon
so has part: feature:523850-523954:-1:exon
so has part: feature:522750-522880:-1:exon
so has part: feature:522387-522446:-1:exon
so has part: feature:521367-521525:-1:exon
so has part: feature:520580-520756:-1:exon
so has part: feature:520258-520378:-1:exon
so has part: feature:519538-519668:-1:exon
so has part: feature:519165-519278:-1:exon
so has part: feature:518957-519074:-1:exon
so has part: feature:518606-518800:-1:exon
so has part: feature:518312-518487:-1:exon
so has part: feature:518057-518213:-1:exon
so has part: feature:517769-517948:-1:exon
so has part: feature:517228-517320:-1:exon
so has part: feature:516802-516934:-1:exon
so has part: feature:516492-516642:-1:exon
so has part: feature:516103-516236:-1:exon
so has part: feature:515808-515896:-1:exon
so has part: feature:515443-515566:-1:exon
so has part: feature:514772-515012:-1:exon
so has part: feature:514453-514576:-1:exon
so has part: feature:513496-513617:-1:exon
so has part: feature:513269-513368:-1:exon
so has part: feature:512904-513059:-1:exon
so has part: feature:512547-512759:-1:exon
so has part: feature:512145-512298:-1:exon
so has part: feature:511825-512037:-1:exon
so has part: feature:511075-511235:-1:exon
so has part: feature:510719-510832:-1:exon
so has part: feature:509578-509685:-1:exon
so has part: feature:509080-509212:-1:exon
so has part: feature:508924-509000:-1:exon
so has part: feature:508686-508818:-1:exon
so has part: feature:508411-508547:-1:exon
so has part: feature:508145-508269:-1:exon
so has part: feature:506937-507080:-1:exon
so has part: feature:506685-506784:-1:exon
so has part: feature:505461-505566:-1:exon
so has part: feature:505151-505356:-1:exon
so has part: feature:504925-505029:-1:exon
so has part: feature:504581-504703:-1:exon

XP_019665764.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537414-537872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536146-536328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535704-535838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534830-534991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534253-534414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533863-533940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532167-532291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531809-531966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528783-528892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527786-527972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524871-525042:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524097-524255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523850-523954:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522750-522880:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522387-522446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:521367-521525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:520580-520756:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:520258-520378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:519538-519668:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:519165-519278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:518957-519074:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:518606-518800:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:518312-518487:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:518057-518213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517769-517948:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517228-517320:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:516802-516934:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:516492-516642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:516103-516236:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:515808-515896:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:515443-515566:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:514772-515012:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:514453-514576:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:513496-513617:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:513269-513368:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:512904-513059:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:512547-512759:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:512145-512298:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:511825-512037:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:511075-511235:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:510719-510832:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:509578-509685:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:509080-509212:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:508924-509000:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:508686-508818:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:508411-508547:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:508145-508269:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:506937-507080:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:506685-506784:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:505461-505566:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:505151-505356:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:504925-505029:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:504581-504703:-1:exon

TEP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TEP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: telomerase protein component 1 isoform X1
translation: MEKLQGHASSHLDILSLENRCLATLPNLQPMKKPHGHVSAHPDILSLENQCLATLPDLKTMEKPHGHVSAHPDILSLENRCLATLPVLKSTVSASPLLHCLQRAPLVQAALRSLPSEPPTWRAQCLSEGLGCLSCPTALKSVSAKERAPETALGRCSSSEEKMPEEKERVEVQMPFYNLSLGEEETLEEPVLKLTAGDSDSHPGPTDQALKDKKMVLISLLCSTLTSKGNIEDAADPTSGTLFEVCSELAPLEPEFILKASLYARQQLNIRTVANKVLAIAAFLPVCRPHLRRYFCAIVQLPSDWLQVAEFYEKLAGGEEDKLVPLPACLRAAMTDKFAQFDEYQLAKYNPRKHRAKRRPRPPPRPPKTGRPFSETQKYLPRYLRPLKDEQKKFEETYNAVPERKQQPRFTLKKLVRRLHIREPAQHVQALLGYRYPSNLQMFSRSRLPGAWDASRAGKRMKLPRPETWERELSLRGNKASVWEELIDSGKLPFMAMLRNLCNLLRAGISARHHELVLQRLQHENSVIHSRQFPFRFLNAHDSIHDLEARLKSKALPPPSNTKLIRSIMTRNAKKDRNWTYRRYPHPPSRRQLRTTMMMPVIYEQLKWEKLKIQKASRRGKYDGEMMARYRQALETAVNISAKHNLPPLPGRTVLVYLTDMGTDELCRKSTLQGRPINYVLLLIGMMIARAEQVDLLLCGRGTMKTAVFKAEEGILKTAGTLLAQVQQGTGDSFLQDLDEEGEWSVNTFGKYLLSLAAQRVPVDRVILFGNTMYNRLVNEAKQLFWQHVNSKCLFVALPLGRTCDTLPDSNPNNVTLSGYTDGILKFIAERGASRLLEHVGQMDKIFKVPPPPGKTGDLSLRPLEENTLSPLAPISQPRWRSVRLFISSTFRDMHGERDLLLRSVLPALQARAAPHCISLHAIDLRWGVTEEETRRNRQLEVCLGEVENAQLFVGILGSRYGHVPPNYNLPDHPHFRWAQQYPAGRSVTEMEVMQFLDRRLRLRLQPSAQALLYFRDSGFLRSVPDAWKSDLTSESEEAARRISELKSFLSRQQGVTCRRYSCEWGGVAAGRPYAGGLEEFGQLVLQDVWNMIQQLYLQPGAQLEQPASIADDDLVQATFQQLQNPPSPARPHLLRDTVKQLMLRRERLSLVTGQSGQGKTAFLASLVSALRAPDGAKVAPFIFFHFSGARPDQGLALTLLRRLCAYLHCQLRKPSALPTTYRGLVWEIQQRLLPEYAQSLRSGQTLVLIIDGADRLVDQHGQPVSDWIPKTLPPRVHLVLSVSTDAGLGDTLEQSQRAHVVALGPLEPSARARLVREELALYGKRLEESPFNNQMRLLLVKRGSSLPLYLRLVTDHLRLYTLYEQVSERLRTLPATVPLLLQHILGTLEKEHGPDVLPQALATLEATRSGLTVDQLHAVLSAWRILPRGAKSWEEAVAAGSSGEPYPMGPFAYLVQSLRSLLGEGPLERAGARLCLPAGPLRTAAQCRYGKRLGLEKTAHILIAAQLWKTCDPEASGTFQNCLPEALADLPYHLLQSGNRGLLAKFLTNIHVVAAHLELGLVSRLLEAHALYDEITSSVPKDEQSLPEADVAVFHTFLRQQAPVLSQYPLLLPQQAANQPLDSPLCRQAPQLSRRWRLQHVLRWLNKPHTMEGQQSSSLSLAVSSSPTAVALSPSGQRAAVGTASGMVYLLDLRTWQEKSLVSGCDGVSSCSFLSDNALFLTAFDGLLELWDLQQGCRVLQTSAHKYQITGCCLSPDRRLLATVCLGGCLKLWDTVRGQLAFQHAGPRPLNCVAFHPEGQMVAVGSWAGSFSLFHVDGLKAAKDLGAPGASVRTVAFSVPGRVVAVGRLDGMVELWSWHEGAQLAAFPAHHGIVATALFLRAGRQLLTAGEDGKVQVWSGSLGRPRGCLGSLSLSPALSVALSPDGDRVAIGYRADGIRIYKIASGSQGAQCQALDVAVSALVWLSPKVLVSGAEDGSLQGWALKESSLQSLWLLSRYQ…
SIO_010081: TEP1
subclass of: SO_0000673
so part of: TEP1
location: complement(join(504581..504703,504925..505029,505151..505356,505461..505566,506685..506784,506937..507080,508145..508269,508411..508547,508686..508818,508924..509000,509080..509212,509578..509685,510719..510832,511075..511235,511825..512037,512145..512298,512547..512759,512904..513059,513269..513368,513496..513617,514453..514576,514772..515012,515443..515566,515808..515896,516103..516236,516492..516642,516802..516934,517228..517320,517769..517948,518057..518213,518312..518487,518606..518800,518957..519074,519165..519278,519538..519668,520258..520378,520580..520756,521367..521525,522387..522446,522750..522880,523850..523954,524097..524255,524871..525042,527786..527972,528202..528292,528783..528892,531809..531966,532167..532291,533863..533940,534253..534414,534830..534991,535704..535838,536146..536328,537414..537872))
location: region:504581-537872:-1
so has part: feature:537414-537872:-1:exon
so has part: feature:536146-536328:-1:exon
so has part: feature:535704-535838:-1:exon
so has part: feature:534830-534991:-1:exon
so has part: feature:534253-534414:-1:exon
so has part: feature:533863-533940:-1:exon
so has part: feature:532167-532291:-1:exon
so has part: feature:531809-531966:-1:exon
so has part: feature:528783-528892:-1:exon
so has part: feature:528202-528292:-1:exon
so has part: feature:527786-527972:-1:exon
so has part: feature:524871-525042:-1:exon
so has part: feature:524097-524255:-1:exon
so has part: feature:523850-523954:-1:exon
so has part: feature:522750-522880:-1:exon
so has part: feature:522387-522446:-1:exon
so has part: feature:521367-521525:-1:exon
so has part: feature:520580-520756:-1:exon
so has part: feature:520258-520378:-1:exon
so has part: feature:519538-519668:-1:exon
so has part: feature:519165-519278:-1:exon
so has part: feature:518957-519074:-1:exon
so has part: feature:518606-518800:-1:exon
so has part: feature:518312-518487:-1:exon
so has part: feature:518057-518213:-1:exon
so has part: feature:517769-517948:-1:exon
so has part: feature:517228-517320:-1:exon
so has part: feature:516802-516934:-1:exon
so has part: feature:516492-516642:-1:exon
so has part: feature:516103-516236:-1:exon
so has part: feature:515808-515896:-1:exon
so has part: feature:515443-515566:-1:exon
so has part: feature:514772-515012:-1:exon
so has part: feature:514453-514576:-1:exon
so has part: feature:513496-513617:-1:exon
so has part: feature:513269-513368:-1:exon
so has part: feature:512904-513059:-1:exon
so has part: feature:512547-512759:-1:exon
so has part: feature:512145-512298:-1:exon
so has part: feature:511825-512037:-1:exon
so has part: feature:511075-511235:-1:exon
so has part: feature:510719-510832:-1:exon
so has part: feature:509578-509685:-1:exon
so has part: feature:509080-509212:-1:exon
so has part: feature:508924-509000:-1:exon
so has part: feature:508686-508818:-1:exon
so has part: feature:508411-508547:-1:exon
so has part: feature:508145-508269:-1:exon
so has part: feature:506937-507080:-1:exon
so has part: feature:506685-506784:-1:exon
so has part: feature:505461-505566:-1:exon
so has part: feature:505151-505356:-1:exon
so has part: feature:504925-505029:-1:exon
so has part: feature:504581-504703:-1:exon

XP_019665763.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:537414-537872:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:536146-536328:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:535704-535838:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:534830-534991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:534253-534414:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:533863-533940:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:532167-532291:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:531809-531966:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:528783-528892:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:528202-528292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:527786-527972:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:524871-525042:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:524097-524255:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:523850-523954:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:522750-522880:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:522387-522446:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:521367-521525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:520580-520756:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:520258-520378:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:519538-519668:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:519165-519278:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:518957-519074:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:518606-518800:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:518312-518487:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:518057-518213:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:517769-517948:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:517228-517320:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:516802-516934:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:516492-516642:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:516103-516236:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:515808-515896:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:515443-515566:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:514772-515012:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:514453-514576:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:513496-513617:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:513269-513368:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:512904-513059:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:512547-512759:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:512145-512298:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:511825-512037:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:511075-511235:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:510719-510832:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:509578-509685:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:509080-509212:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:508924-509000:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:508686-508818:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:508411-508547:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:508145-508269:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:506937-507080:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:506685-506784:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:505461-505566:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:505151-505356:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:504925-505029:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:504581-504703:-1:exon

KLHL33
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: KLHL33
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(554968..561785)
location: region:554968-561785:-1
so has part: feature:554968-561785:-1:exon
subclass of: SO_0000010

100484400
type: Gene
SIO_000068: ncbigene

position:554968:-1
position: 554968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561785:-1
position: 561785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:554968-561785:-1:exon

KLHL33
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: KLHL33
product: kelch like family member 33
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_002929520.4
SIO_010081: KLHL33
subclass of: SO_0000673
so part of: KLHL33
location: complement(join(554968..555519,555625..555792,555908..556832,560549..561301,561576..561785))
location: region:554968-561785:-1
so has part: feature:561576-561785:-1:exon
so has part: feature:560549-561301:-1:exon
so has part: feature:555908-556832:-1:exon
so has part: feature:555625-555792:-1:exon
so has part: feature:554968-555519:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561576-561785:-1:exon

position:561576:-1
position: 561576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:560549-561301:-1:exon

position:560549:-1
position: 560549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561301:-1
position: 561301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:555908-556832:-1:exon

position:555908:-1
position: 555908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:556832:-1
position: 556832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:555625-555792:-1:exon

position:555625:-1
position: 555625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:555792:-1
position: 555792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:554968-555519:-1:exon

position:555519:-1
position: 555519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHL33
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: KLHL33
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: kelch-like protein 33
translation: MSVSDSAHRSSEPLPAQKDRLGLPLPDRRTPSWPPSPDEDPGLPPFPLEEAVPRPVAPGNLPSPALSLEEDEEEENEDGEDAADLEGLRSEEHPSQFFAEAQRLREQRLLLDEEVSVGGRVYGVHRVILAAVSSLFRNRMLGGTGPRPPLSLDVAAGAWEAALTFAYEGFLGPAPWGDVLVAAEALGAPRVKAAAQRRGKGAGSAREDEKQPSQAEELRENLHNIELLYKEGVGCDLELEAGGCRLRVHRAALACGSEFFGAMLLSGMRESQGTEVSLHTISAQDLRLLVSFAYSGVVRARWPGLLRAAQAAVQYQSSSCLALCQRALARGLSPARCLALFPIAEAPGLERLWSKARHYLLTHLPAVALCPTFPSLPSACLAELLDSDELHVQEEFEAFMAAWRWLAAHPETEESEAKALLRCVRFGRMSTRELRRVRAAGLPPPLAPDLLHQLLVEAAVPGQERRREPDQALVVIGGDGLRSDMARTQPSRGVWWARAFCCGTGLVRTVEWGRLPALPGPGRFRHGAASLAGSELYVCGGQDFYSPTNTLASTLRWDPSQEDWGEVAPLCQARSFFPLVALDGLLYALGGRDGDVALNSVEAYDPELNVWRPAPALPAPRFAHAAAVLEGRLYVSGGCSGAGQYLASLLHYDPKLERPGTLLSPMGVPRAGHVMAALGGRLYVAGGLGEKGDLLSFEAYEPKTDSWTHLAPLPSPHVGAAGAALQGELLVLGGYSHCTYALSHLIHAYCPGLGRWLCLGTLPRPRAEMPACVLTRPXVQHIPLVPARHQTKPAG
SIO_010081: KLHL33
subclass of: SO_0000673
so part of: KLHL33
location: complement(join(554968..555519,555625..555792,555908..556832,560549..561290))
location: region:554968-561290:-1
so has part: feature:560549-561290:-1:exon
so has part: feature:555908-556832:-1:exon
so has part: feature:555625-555792:-1:exon
so has part: feature:554968-555519:-1:exon

XP_002929566.2
type: Protein
SIO_000068: ncbiprotein

position:561290:-1
position: 561290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:560549-561290:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:555908-556832:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:555625-555792:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:554968-555519:-1:exon

LOC117797234
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797234
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 561875..577680
location: region:561875-577680:1
so has part: feature:561875-577680:1:exon
subclass of: SO_0000011

117797234
type: Gene
SIO_000068: ncbigene

position:561875:1
position: 561875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:577680:1
position: 577680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561875-577680:1:exon

LOC117797234
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC117797234
product: uncharacterized LOC117797234, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004622161.1
SIO_010081: LOC117797234
subclass of: SO_0000673
so part of: LOC117797234
location: join(561875..562620,562717..562828,564461..565415,568445..568633,577424..577680)
location: region:561875-577680:1
so has part: feature:561875-562620:1:exon
so has part: feature:562717-562828:1:exon
so has part: feature:564461-565415:1:exon
so has part: feature:568445-568633:1:exon
so has part: feature:577424-577680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561875-562620:1:exon

position:562620:1
position: 562620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:562717-562828:1:exon

position:562717:1
position: 562717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:562828:1
position: 562828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:564461-565415:1:exon

position:564461:1
position: 564461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:565415:1
position: 565415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:568445-568633:1:exon

position:568445:1
position: 568445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:568633:1
position: 568633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:577424-577680:1:exon

position:577424:1
position: 577424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117797234
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC117797234
product: uncharacterized LOC117797234, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_004622160.1
SIO_010081: LOC117797234
subclass of: SO_0000673
so part of: LOC117797234
location: join(561875..562620,562717..562828,564461..565415,577424..577679)
location: region:561875-577679:1
so has part: feature:561875-562620:1:exon
so has part: feature:562717-562828:1:exon
so has part: feature:564461-565415:1:exon
so has part: feature:577424-577679:1:exon

position:577679:1
position: 577679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561875-562620:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:562717-562828:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:564461-565415:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:577424-577679:1:exon

OSGEP
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: OSGEP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(572240..579458)
location: region:572240-579458:-1
so has part: feature:572240-579458:-1:exon
subclass of: SO_0000010

100482644
type: Gene
SIO_000068: ncbigene

position:572240:-1
position: 572240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579458:-1
position: 579458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:572240-579458:-1:exon

OSGEP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: OSGEP
product: O-sialoglycoprotein endopeptidase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_002929513.4
SIO_010081: OSGEP
subclass of: SO_0000673
so part of: OSGEP
location: complement(join(572240..572448,572594..572692,572793..572868,573094..573184,573298..573363,573949..574027,574174..574223,574360..574455,576501..576676,576859..576978,579078..579458))
location: region:572240-579458:-1
so has part: feature:579078-579458:-1:exon
so has part: feature:576859-576978:-1:exon
so has part: feature:576501-576676:-1:exon
so has part: feature:574360-574455:-1:exon
so has part: feature:574174-574223:-1:exon
so has part: feature:573949-574027:-1:exon
so has part: feature:573298-573363:-1:exon
so has part: feature:573094-573184:-1:exon
so has part: feature:572793-572868:-1:exon
so has part: feature:572594-572692:-1:exon
so has part: feature:572240-572448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579078-579458:-1:exon

position:579078:-1
position: 579078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:576859-576978:-1:exon

position:576859:-1
position: 576859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576978:-1
position: 576978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:576501-576676:-1:exon

position:576501:-1
position: 576501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:576676:-1
position: 576676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:574360-574455:-1:exon

position:574360:-1
position: 574360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574455:-1
position: 574455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:574174-574223:-1:exon

position:574174:-1
position: 574174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574223:-1
position: 574223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:573949-574027:-1:exon

position:573949:-1
position: 573949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574027:-1
position: 574027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:573298-573363:-1:exon

position:573298:-1
position: 573298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573363:-1
position: 573363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:573094-573184:-1:exon

position:573094:-1
position: 573094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:573184:-1
position: 573184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:572793-572868:-1:exon

position:572793:-1
position: 572793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572868:-1
position: 572868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:572594-572692:-1:exon

position:572594:-1
position: 572594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:572692:-1
position: 572692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:572240-572448:-1:exon

position:572448:-1
position: 572448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OSGEP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: OSGEP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable tRNA N6-adenosine threonylcarbamoyltransferase
translation: MPAVLGFEGSANKIGVGVVRDGTVLANPRRTYVTPPGTGFLPGDTARHHRAVILDLLQEALTEAGLTSQDIDCIAYTKGPGMGAPLVSVAVVARTVAQLWNKPLLGVNHCIGHIEMGRLITGATSPTVLYVSGGNTQVIAYSEHRYRIFGETIDIAVGNCLDRFARVLKISNDPSPGYNIEQMAKRGKKLVELPYTVKGMDVSFSGILSFIEDAAQRMLATGECTPEDLCFSLQETVFAMLVEITERAMAHCGSQEALIVGGVGCNLRLQEMMETMCQERGARLFATDERFCIDNGAMIAQAGWEMFRAGHRTPLSDSGITQRYRTDEVEVTWRD
SIO_010081: OSGEP
subclass of: SO_0000673
so part of: OSGEP
location: complement(join(572409..572448,572594..572692,572793..572868,573094..573184,573298..573363,573949..574027,574174..574223,574360..574455,576501..576676,576859..576978,579078..579192))
location: region:572409-579192:-1
so has part: feature:579078-579192:-1:exon
so has part: feature:576859-576978:-1:exon
so has part: feature:576501-576676:-1:exon
so has part: feature:574360-574455:-1:exon
so has part: feature:574174-574223:-1:exon
so has part: feature:573949-574027:-1:exon
so has part: feature:573298-573363:-1:exon
so has part: feature:573094-573184:-1:exon
so has part: feature:572793-572868:-1:exon
so has part: feature:572594-572692:-1:exon
so has part: feature:572409-572448:-1:exon

XP_002929559.1
type: Protein
SIO_000068: ncbiprotein

position:572409:-1
position: 572409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:579192:-1
position: 579192
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579078-579192:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:576859-576978:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:576501-576676:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:574360-574455:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:574174-574223:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:573949-574027:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:573298-573363:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:573094-573184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:572793-572868:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:572594-572692:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:572409-572448:-1:exon

APEX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 579654..582814
location: region:579654-582814:1
so has part: feature:579654-582814:1:exon
subclass of: SO_0000010

100482041
type: Gene
SIO_000068: ncbigene

position:579654:1
position: 579654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582814:1
position: 582814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579654-582814:1:exon

APEX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_002929511.4
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(579654..579799,580137..580262,580472..580659,581504..581696,582034..582814)
location: region:579654-582814:1
so has part: feature:579654-579799:1:exon
so has part: feature:580137-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582814:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:579654-579799:1:exon

position:579799:1
position: 579799
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580137-580262:1:exon

position:580137:1
position: 580137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580262:1
position: 580262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:580472-580659:1:exon

position:580472:1
position: 580472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:580659:1
position: 580659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:581504-581696:1:exon

position:581504:1
position: 581504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581696:1
position: 581696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:582034-582814:1:exon

position:582034:1
position: 582034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

APEX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_002929510.4
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(579747..579830,580137..580262,580472..580659,581504..581696,582034..582814)
location: region:579747-582814:1
so has part: feature:579747-579830:1:exon
so has part: feature:580137-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582814:1:exon

position:579747:1
position: 579747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579747-579830:1:exon

position:579830:1
position: 579830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580137-580262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582034-582814:1:exon

APEX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_019810210.2
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(579837..579983,580137..580262,580472..580659,581504..581696,582034..582814)
location: region:579837-582814:1
so has part: feature:579837-579983:1:exon
so has part: feature:580137-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582814:1:exon

position:579837:1
position: 579837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579837-579983:1:exon

position:579983:1
position: 579983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580137-580262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582034-582814:1:exon

APEX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_011237557.3
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(579841..579987,580137..580262,580472..580659,581504..581696,582034..582814)
location: region:579841-582814:1
so has part: feature:579841-579987:1:exon
so has part: feature:580137-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582814:1:exon

position:579841:1
position: 579841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:579841-579987:1:exon

position:579987:1
position: 579987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580137-580262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582034-582814:1:exon

APEX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: APEX1
product: apurinic/apyrimidinic endodeoxyribonuclease 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 21 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_034648425.1
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(580026..580046,580137..580262,580472..580659,581504..581696,582034..582814)
location: region:580026-582814:1
so has part: feature:580026-580046:1:exon
so has part: feature:580137-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582814:1:exon

position:580026:1
position: 580026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580026-580046:1:exon

position:580046:1
position: 580046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:580137-580262:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:582034-582814:1:exon

APEX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) lyase
translation: MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEAAGEGSVLYEDPPDQKTSPSGKSATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(580205..580262,580472..580659,581504..581696,582034..582551)
location: region:580205-582551:1
so has part: feature:580205-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582551:1:exon

XP_019665769.1
type: Protein
SIO_000068: ncbiprotein

position:580205:1
position: 580205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582551:1
position: 582551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580205-580262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582034-582551:1:exon

APEX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) lyase
translation: MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEAAGEGSVLYEDPPDQKTSPSGKSATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(580205..580262,580472..580659,581504..581696,582034..582551)
location: region:580205-582551:1
so has part: feature:580205-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582551:1:exon

XP_034504316.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580205-580262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582034-582551:1:exon

APEX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) lyase
translation: MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEAAGEGSVLYEDPPDQKTSPSGKSATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(580205..580262,580472..580659,581504..581696,582034..582551)
location: region:580205-582551:1
so has part: feature:580205-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582551:1:exon

XP_002929556.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580205-580262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582034-582551:1:exon

APEX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) lyase
translation: MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEAAGEGSVLYEDPPDQKTSPSGKSATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(580205..580262,580472..580659,581504..581696,582034..582551)
location: region:580205-582551:1
so has part: feature:580205-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582551:1:exon

XP_002929557.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580205-580262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582034-582551:1:exon

APEX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: APEX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA-(apurinic or apyrimidinic site) lyase
translation: MPKRGKKGAVAEDGEEPKIEPEAKKSKAGAKKNEKEAAGEGSVLYEDPPDQKTSPSGKSATLKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELSGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDAFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKALGSDHCPITLYLAL
SIO_010081: APEX1
subclass of: SO_0000673
so part of: APEX1
location: join(580205..580262,580472..580659,581504..581696,582034..582551)
location: region:580205-582551:1
so has part: feature:580205-580262:1:exon
so has part: feature:580472-580659:1:exon
so has part: feature:581504-581696:1:exon
so has part: feature:582034-582551:1:exon

XP_011235859.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:580205-580262:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:580472-580659:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:581504-581696:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:582034-582551:1:exon

PIP4P1
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: PIP4P1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(582899..586761)
location: region:582899-586761:-1
so has part: feature:582899-586761:-1:exon
subclass of: SO_0000010

100484149
type: Gene
SIO_000068: ncbigene

position:582899:-1
position: 582899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586761:-1
position: 586761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582899-586761:-1:exon

PIP4P1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: PIP4P1
product: phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_034648426.1
SIO_010081: PIP4P1
subclass of: SO_0000673
so part of: PIP4P1
location: complement(join(582899..583748,584224..584314,584412..584464,584671..584776,585443..585549,585896..586086,586409..586761))
location: region:582899-586761:-1
so has part: feature:586409-586761:-1:exon
so has part: feature:585896-586086:-1:exon
so has part: feature:585443-585549:-1:exon
so has part: feature:584671-584776:-1:exon
so has part: feature:584412-584464:-1:exon
so has part: feature:584224-584314:-1:exon
so has part: feature:582899-583748:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:586409-586761:-1:exon

position:586409:-1
position: 586409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585896-586086:-1:exon

position:585896:-1
position: 585896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586086:-1
position: 586086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:585443-585549:-1:exon

position:585443:-1
position: 585443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585549:-1
position: 585549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:584671-584776:-1:exon

position:584671:-1
position: 584671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584776:-1
position: 584776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:584412-584464:-1:exon

position:584412:-1
position: 584412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584464:-1
position: 584464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:584224-584314:-1:exon

position:584224:-1
position: 584224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584314:-1
position: 584314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:582899-583748:-1:exon

position:583748:-1
position: 583748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIP4P1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: PIP4P1
product: phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_034648427.1
SIO_010081: PIP4P1
subclass of: SO_0000673
so part of: PIP4P1
location: complement(join(582899..583748,584224..584314,584412..584464,584671..584776,585443..585549,585896..586086,586430..586760))
location: region:582899-586760:-1
so has part: feature:586430-586760:-1:exon
so has part: feature:585896-586086:-1:exon
so has part: feature:585443-585549:-1:exon
so has part: feature:584671-584776:-1:exon
so has part: feature:584412-584464:-1:exon
so has part: feature:584224-584314:-1:exon
so has part: feature:582899-583748:-1:exon

position:586760:-1
position: 586760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586430-586760:-1:exon

position:586430:-1
position: 586430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:585896-586086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:585443-585549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584671-584776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584412-584464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584224-584314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:582899-583748:-1:exon

PIP4P1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: PIP4P1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase isoform X2
translation: MAADGERSPLLSEPIDGGAGGNGLVGPGGSGAGPGGGLTPSAPPYGAAFPPFPEGHPAVLPGEDPPPYSPLTSPDSGSAPMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPMGVRVICGHCKNTFLWTEFTDRTLARCPHCRKVSSIGRRYPRKRCICCFLLGLLLAVTATGLAFGTWKHAQRYGGIYAAWAFVILLAVLCLGRALYWACMKVSHPVQNFS
SIO_010081: PIP4P1
subclass of: SO_0000673
so part of: PIP4P1
location: complement(join(583605..583748,584224..584314,584412..584464,584671..584776,585443..585549,585896..586086,586430..586571))
location: region:583605-586571:-1
so has part: feature:586430-586571:-1:exon
so has part: feature:585896-586086:-1:exon
so has part: feature:585443-585549:-1:exon
so has part: feature:584671-584776:-1:exon
so has part: feature:584412-584464:-1:exon
so has part: feature:584224-584314:-1:exon
so has part: feature:583605-583748:-1:exon

XP_034504318.1
type: Protein
SIO_000068: ncbiprotein

position:583605:-1
position: 583605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586571:-1
position: 586571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:586430-586571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585896-586086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:585443-585549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584671-584776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584412-584464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584224-584314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:583605-583748:-1:exon

PIP4P1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: PIP4P1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase isoform X1
translation: MAADGERSPLLSEPIDGGAGGNGLVGPGGSGAGPGGGLTPSAPPYGAGKHAPPQAFPPFPEGHPAVLPGEDPPPYSPLTSPDSGSAPMITCRVCQSLINVEGKMHQHVVKCGVCNEATPIKNAPPGKKYVRCPCNCLLICKVTSQRIACPRPYCKRIINLGPVHPGPLSPEPQPMGVRVICGHCKNTFLWTEFTDRTLARCPHCRKVSSIGRRYPRKRCICCFLLGLLLAVTATGLAFGTWKHAQRYGGIYAAWAFVILLAVLCLGRALYWACMKVSHPVQNFS
SIO_010081: PIP4P1
subclass of: SO_0000673
so part of: PIP4P1
location: complement(join(583605..583748,584224..584314,584412..584464,584671..584776,585443..585549,585896..586086,586409..586571))
location: region:583605-586571:-1
so has part: feature:586409-586571:-1:exon
so has part: feature:585896-586086:-1:exon
so has part: feature:585443-585549:-1:exon
so has part: feature:584671-584776:-1:exon
so has part: feature:584412-584464:-1:exon
so has part: feature:584224-584314:-1:exon
so has part: feature:583605-583748:-1:exon

XP_034504317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:586409-586571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:585896-586086:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:585443-585549:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:584671-584776:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:584412-584464:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:584224-584314:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:583605-583748:-1:exon

PNP
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: PNP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 605151..613023
location: region:605151-613023:1
so has part: feature:605151-613023:1:exon
subclass of: SO_0000010

100481637
type: Gene
SIO_000068: ncbigene

position:605151:1
position: 605151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:613023:1
position: 613023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605151-613023:1:exon

PNP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: PNP
product: purine nucleoside phosphorylase
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_002929509.4
SIO_010081: PNP
subclass of: SO_0000673
so part of: PNP
location: join(605151..605308,608082..608251,610979..611082,611286..611461,611578..611768,612342..613023)
location: region:605151-613023:1
so has part: feature:605151-605308:1:exon
so has part: feature:608082-608251:1:exon
so has part: feature:610979-611082:1:exon
so has part: feature:611286-611461:1:exon
so has part: feature:611578-611768:1:exon
so has part: feature:612342-613023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:605151-605308:1:exon

position:605308:1
position: 605308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:608082-608251:1:exon

position:608082:1
position: 608082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:608251:1
position: 608251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:610979-611082:1:exon

position:610979:1
position: 610979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611082:1
position: 611082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:611286-611461:1:exon

position:611286:1
position: 611286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611461:1
position: 611461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:611578-611768:1:exon

position:611578:1
position: 611578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:611768:1
position: 611768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:612342-613023:1:exon

position:612342:1
position: 612342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PNP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: PNP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: purine nucleoside phosphorylase
translation: MEKRYTYDDYQKTSEWLLSRTKHRPQVAVICGSGLGSLAGKVTEAQSFDYSEIPNFPQSTVPGHAGRLVFGFLNGKACVMMQGRFHMYEGYSISKVTFPVRVFFLMGVDTLVVTNAAGGLNPEFEVGDIMLIRDHINLPGFSGVNPLIGPNDERFGLRFPAMSDAYDRDMRQTAHRVWKEMGQQRELKEGTYVMLAGPSFETVAECWLLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKVVFDYESKEKVNHEEVLEAGRQAAQKLEEFVSILMMSIPPPAEVS
SIO_010081: PNP
subclass of: SO_0000673
so part of: PNP
location: join(605298..605308,608082..608251,610979..611082,611286..611461,611578..611768,612342..612559)
location: region:605298-612559:1
so has part: feature:605298-605308:1:exon
so has part: feature:608082-608251:1:exon
so has part: feature:610979-611082:1:exon
so has part: feature:611286-611461:1:exon
so has part: feature:611578-611768:1:exon
so has part: feature:612342-612559:1:exon

XP_002929555.1
type: Protein
SIO_000068: ncbiprotein

position:605298:1
position: 605298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:612559:1
position: 612559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:605298-605308:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:608082-608251:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:610979-611082:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:611286-611461:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:611578-611768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:612342-612559:1:exon

LOC117797306
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797306
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 609056..609203
location: region:609056-609203:1
so has part: feature:609056-609203:1:exon
subclass of: SO_0000623

117797306
type: Gene
SIO_000068: ncbigene

position:609056:1
position: 609056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:609203:1
position: 609203
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:609056-609203:1:exon

LOC117797306
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: snRNA
gene: LOC117797306
product: U12 minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00007
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004622237.1
SIO_010081: LOC117797306
subclass of: SO_0000673
so part of: LOC117797306
location: 609056..609203
location: region:609056-609203:1
so has part: feature:609056-609203:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:609056-609203:1:exon

RNASE10
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: RNASE10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 631387..639127
location: region:631387-639127:1
so has part: feature:631387-639127:1:exon
subclass of: SO_0000010

100481386
type: Gene
SIO_000068: ncbigene

position:631387:1
position: 631387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:639127:1
position: 639127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:631387-639127:1:exon

RNASE10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE10
product: ribonuclease A family member 10 (inactive), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034648582.1
SIO_010081: RNASE10
subclass of: SO_0000673
so part of: RNASE10
location: join(631387..633710,637547..639127)
location: region:631387-639127:1
so has part: feature:631387-633710:1:exon
so has part: feature:637547-639127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:631387-633710:1:exon

position:633710:1
position: 633710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637547-639127:1:exon

position:637547:1
position: 637547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNASE10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ribonuclease-like protein 10 isoform X1
translation: MRSYGTMKLTLVQIFFMMLLLLLGLGLGLGLGLQMAAAILEDSDQSLSELWSSDSDDKTKATKGEGSRTAETLLLSNKGVVQPGWSEDTVLGEDEVRGSKMLRDEPPLHSHKDYLRSDLMTRECNTLMAQKLKEHNRTCISQYTFIHEDVDTVKAVCNSPVVACELKGGKCHKSSRPFDLTLCRLSKPGQVTPHCNYLTFIFERRIIISCPDMKVQIMSGQ
SIO_010081: RNASE10
subclass of: SO_0000673
so part of: RNASE10
location: join(633698..633710,637547..638199)
location: region:633698-638199:1
so has part: feature:633698-633710:1:exon
so has part: feature:637547-638199:1:exon

XP_034504473.1
type: Protein
SIO_000068: ncbiprotein

position:633698:1
position: 633698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:638199:1
position: 638199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633698-633710:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637547-638199:1:exon

RNASE10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE10
product: ribonuclease A family member 10 (inactive), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_034648583.1
SIO_010081: RNASE10
subclass of: SO_0000673
so part of: RNASE10
location: join(634804..635986,637520..639127)
location: region:634804-639127:1
so has part: feature:634804-635986:1:exon
so has part: feature:637520-639127:1:exon

position:634804:1
position: 634804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634804-635986:1:exon

position:635986:1
position: 635986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:637520-639127:1:exon

position:637520:1
position: 637520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNASE10
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE10
product: ribonuclease A family member 10 (inactive), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_011237555.3
SIO_010081: RNASE10
subclass of: SO_0000673
so part of: RNASE10
location: join(634804..635986,637547..639127)
location: region:634804-639127:1
so has part: feature:634804-635986:1:exon
so has part: feature:637547-639127:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634804-635986:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:637547-639127:1:exon

RNASE10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ribonuclease-like protein 10 isoform X2
translation: MKLTLVQIFFMMLLLLLGLGLGLGLGLQMAAAILEDSDQSLSELWSSDSDDKTKATKGEGSRTAETLLLSNKGVVQPGWSEDTVLGEDEVRGSKMLRDEPPLHSHKDYLRSDLMTRECNTLMAQKLKEHNRTCISQYTFIHEDVDTVKAVCNSPVVACELKGGKCHKSSRPFDLTLCRLSKPGQVTPHCNYLTFIFERRIIISCPDMKVQIMSGQ
SIO_010081: RNASE10
subclass of: SO_0000673
so part of: RNASE10
location: 637552..638199
location: region:637552-638199:1
so has part: feature:637552-638199:1:exon

XP_034504474.1
type: Protein
SIO_000068: ncbiprotein

position:637552:1
position: 637552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:637552-638199:1:exon

RNASE10
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE10
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ribonuclease-like protein 10 isoform X2
translation: MKLTLVQIFFMMLLLLLGLGLGLGLGLQMAAAILEDSDQSLSELWSSDSDDKTKATKGEGSRTAETLLLSNKGVVQPGWSEDTVLGEDEVRGSKMLRDEPPLHSHKDYLRSDLMTRECNTLMAQKLKEHNRTCISQYTFIHEDVDTVKAVCNSPVVACELKGGKCHKSSRPFDLTLCRLSKPGQVTPHCNYLTFIFERRIIISCPDMKVQIMSGQ
SIO_010081: RNASE10
subclass of: SO_0000673
so part of: RNASE10
location: 637552..638199
location: region:637552-638199:1
so has part: feature:637552-638199:1:exon

XP_011235857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:637552-638199:1:exon

RNASE9
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: RNASE9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(671987..674782)
location: region:671987-674782:-1
so has part: feature:671987-674782:-1:exon
subclass of: SO_0000010

105242162
type: Gene
SIO_000068: ncbigene

position:671987:-1
position: 671987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:674782:-1
position: 674782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:671987-674782:-1:exon

RNASE9
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE9
product: ribonuclease A family member 9 (inactive)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_011237566.3
SIO_010081: RNASE9
subclass of: SO_0000673
so part of: RNASE9
location: complement(join(671987..672969,674697..674782))
location: region:671987-674782:-1
so has part: feature:674697-674782:-1:exon
so has part: feature:671987-672969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:674697-674782:-1:exon

position:674697:-1
position: 674697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:671987-672969:-1:exon

position:672969:-1
position: 672969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNASE9
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE9
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inactive ribonuclease-like protein 9
translation: MRAPRAARPLALLLLLLQPLQFKFLRMHLGKSEEETEEFEDYLEELLRPGPARPLTKDAFQQRTIIDPTRPLTDPEYCTAEMKMKNVHNKFRCVREHFFLQVAYEELQKLCKNIFVPCKNGVKKCHRSRQLIEGVYCNLTRGVRMSDCEYESSYRQGYVLITCRWQNDIQEIIPAYVNDIMTLDKHVKGGNIFYSELEWPF
SIO_010081: RNASE9
subclass of: SO_0000673
so part of: RNASE9
location: complement(672350..672955)
location: region:672350-672955:-1
so has part: feature:672350-672955:-1:exon

XP_011235868.1
type: Protein
SIO_000068: ncbiprotein

position:672350:-1
position: 672350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:672955:-1
position: 672955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:672350-672955:-1:exon

RNASE11
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: RNASE11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(692559..693659)
location: region:692559-693659:-1
so has part: feature:692559-693659:-1:exon
subclass of: SO_0000010

117797267
type: Gene
SIO_000068: ncbigene

position:692559:-1
position: 692559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:693659:-1
position: 693659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:692559-693659:-1:exon

RNASE11
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE11
product: ribonuclease A family member 11 (inactive)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648638.1
SIO_010081: RNASE11
subclass of: SO_0000673
so part of: RNASE11
location: complement(692559..693659)
location: region:692559-693659:-1
so has part: feature:692559-693659:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:692559-693659:-1:exon

RNASE11
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE11
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable ribonuclease 11
translation: METFSLLLLSLGLVLAGDSESLMERIKEEFSGGEMQYDMGNSDQGKQTIEVLMNLTLLYKNTSLRMSKDILSSSLLTFRRLRYSFAKGNSPGNDKEYRNDMVVWREVSEANGSRKLSYNFTHGSMGVIHGAPKASSCKCGQNLGTNCSRSPELDTTTCQLAVGEQFPRCQYHSDTSLKKILAVLTGHSLMSWLVSGSKL
SIO_010081: RNASE11
subclass of: SO_0000673
so part of: RNASE11
location: complement(693060..693659)
location: region:693060-693659:-1
so has part: feature:693060-693659:-1:exon

XP_034504529.1
type: Protein
SIO_000068: ncbiprotein

position:693060:-1
position: 693060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693060-693659:-1:exon

RNASE12
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: RNASE12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(697392..702154)
location: region:697392-702154:-1
so has part: feature:697392-702154:-1:exon
subclass of: SO_0000010

100481137
type: Gene
SIO_000068: ncbigene

position:697392:-1
position: 697392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702154:-1
position: 702154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697392-702154:-1:exon

RNASE12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE12
product: ribonuclease A family member 12 (inactive)
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_034648639.1
SIO_010081: RNASE12
subclass of: SO_0000673
so part of: RNASE12
location: complement(join(697392..698040,701707..702154))
location: region:697392-702154:-1
so has part: feature:701707-702154:-1:exon
so has part: feature:697392-698040:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:701707-702154:-1:exon

position:701707:-1
position: 701707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:697392-698040:-1:exon

position:698040:-1
position: 698040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNASE12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive ribonuclease-like protein 12
translation: MILMVIIFLMLLFWENELNEEGEVWTMERLHVDYPKSDIPVRYCNRMVLQRVIRGPDNTCKKEHVFIHERPRNINRVCTSSKKRICQNRSSTLCFQSMTKFKMTVCQLVGGTRYPACRYRMSSMKGFVAFTCDDMGPVSLQGYVE
SIO_010081: RNASE12
subclass of: SO_0000673
so part of: RNASE12
location: complement(697565..698002)
location: region:697565-698002:-1
so has part: feature:697565-698002:-1:exon

XP_034504530.1
type: Protein
SIO_000068: ncbiprotein

position:697565:-1
position: 697565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:698002:-1
position: 698002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697565-698002:-1:exon

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(713231..713302)
location: region:713231-713302:-1
so has part: feature:713231-713302:-1:exon
subclass of: SO_0000663

109491297
type: Gene
SIO_000068: ncbigene

position:713231:-1
position: 713231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:713302:-1
position: 713302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:713231-713302:-1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(713268..713270),aa:Pro,seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: complement(713231..713302)
location: region:713231-713302:-1
so has part: feature:713231-713302:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:713231-713302:-1:exon

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 714154..714235
location: region:714154-714235:1
so has part: feature:714154-714235:1:exon
subclass of: SO_0000663

109491293
type: Gene
SIO_000068: ncbigene

position:714154:1
position: 714154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:714235:1
position: 714235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714154-714235:1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:714188..714190,aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: 714154..714235
location: region:714154-714235:1
so has part: feature:714154-714235:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714154-714235:1:exon

TRNAP-AGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAP-AGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(716318..716389)
location: region:716318-716389:-1
so has part: feature:716318-716389:-1:exon
subclass of: SO_0000663

109491296
type: Gene
SIO_000068: ncbigene

position:716318:-1
position: 716318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716389:-1
position: 716389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716318-716389:-1:exon

TRNAP-AGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAP-AGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon AGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(716355..716357),aa:Pro,seq:agg)
SIO_010081: TRNAP-AGG
subclass of: SO_0000673
so part of: TRNAP-AGG
location: complement(716318..716389)
location: region:716318-716389:-1
so has part: feature:716318-716389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716318-716389:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(716706..716778)
location: region:716706-716778:-1
so has part: feature:716706-716778:-1:exon
subclass of: SO_0000663

109491295
type: Gene
SIO_000068: ncbigene

position:716706:-1
position: 716706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716778:-1
position: 716778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:716706-716778:-1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(716743..716745),aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: complement(716706..716778)
location: region:716706-716778:-1
so has part: feature:716706-716778:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:716706-716778:-1:exon

TRNAL-UAG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAL-UAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 722968..723049
location: region:722968-723049:1
so has part: feature:722968-723049:1:exon
subclass of: SO_0000663

109491292
type: Gene
SIO_000068: ncbigene

position:722968:1
position: 722968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:723049:1
position: 723049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:722968-723049:1:exon

TRNAL-UAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAL-UAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:723002..723004,aa:Leu,seq:tag)
SIO_010081: TRNAL-UAG
subclass of: SO_0000673
so part of: TRNAL-UAG
location: 722968..723049
location: region:722968-723049:1
so has part: feature:722968-723049:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:722968-723049:1:exon

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(725912..726002)
location: region:725912-726002:-1
so has part: feature:725912-726002:-1:exon
subclass of: SO_0000663

109491294
type: Gene
SIO_000068: ncbigene

position:725912:-1
position: 725912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726002:-1
position: 726002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:725912-726002:-1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(725967..725969),aa:Tyr,seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: complement(join(725912..725947,725966..726002))
location: region:725912-726002:-1
so has part: feature:725966-726002:-1:exon
so has part: feature:725912-725947:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:725966-726002:-1:exon

position:725966:-1
position: 725966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:725912-725947:-1:exon

position:725947:-1
position: 725947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(726648..726720)
location: region:726648-726720:-1
so has part: feature:726648-726720:-1:exon
subclass of: SO_0000663

109491290
type: Gene
SIO_000068: ncbigene

position:726648:-1
position: 726648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726720:-1
position: 726720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:726648-726720:-1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(726685..726687),aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: complement(726648..726720)
location: region:726648-726720:-1
so has part: feature:726648-726720:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:726648-726720:-1:exon

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 728346..728417
location: region:728346-728417:1
so has part: feature:728346-728417:1:exon
subclass of: SO_0000663

109491291
type: Gene
SIO_000068: ncbigene

position:728346:1
position: 728346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:728417:1
position: 728417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728346-728417:1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:728378..728380,aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: 728346..728417
location: region:728346-728417:1
so has part: feature:728346-728417:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:728346-728417:1:exon

LOC100483896
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100483896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734630..735683)
location: region:734630-735683:-1
so has part: feature:734630-735683:-1:exon
subclass of: SO_0000010

100483896
type: Gene
SIO_000068: ncbigene

position:734630:-1
position: 734630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735683:-1
position: 735683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734630-735683:-1:exon

LOC100483896
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100483896
product: olfactory receptor 6S1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002929518.2
SIO_010081: LOC100483896
subclass of: SO_0000673
so part of: LOC100483896
location: complement(734630..735683)
location: region:734630-735683:-1
so has part: feature:734630-735683:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:734630-735683:-1:exon

LOC100483896
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100483896
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 6S1
translation: MAPGENQSSGVTEFILAGFPNLNNTKAELFSVFLLVYLLTLTGNVLIVGVVGADTRLQTPMYFFLGNLSCLEILLTSVIIPKMLSNFLSRQHTISFAACITQFYFYFFLGASEFLLLAVMSVDRYLAICRPLHYPLLMNGTVCSRVALACWMGGLFPVLGPTVAVALLPFCEQDGVVQHFFCDSGPLLRLACTNTKKLEETDFVLASLVIVPSLMITAVSYGHIVLAVLRIPSVSGRQKAFSTCTSHLMVVTLFYGSAIFLYVRPSQSGSVDTNWAATVVTFVTPLLNPFIYALRNKQVKEALKDTFRKVGASLLGDLLLAKSFNRKTVT
SIO_010081: LOC100483896
subclass of: SO_0000673
so part of: LOC100483896
location: complement(734691..735683)
location: region:734691-735683:-1
so has part: feature:734691-735683:-1:exon

XP_002929564.2
type: Protein
SIO_000068: ncbiprotein

position:734691:-1
position: 734691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734691-735683:-1:exon

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(765376..765465)
location: region:765376-765465:-1
so has part: feature:765376-765465:-1:exon
subclass of: SO_0000663

109488650
type: Gene
SIO_000068: ncbigene

position:765376:-1
position: 765376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:765465:-1
position: 765465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:765376-765465:-1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(765430..765432),aa:Tyr,seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: complement(join(765376..765411,765429..765465))
location: region:765376-765465:-1
so has part: feature:765429-765465:-1:exon
so has part: feature:765376-765411:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:765429-765465:-1:exon

position:765429:-1
position: 765429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:765376-765411:-1:exon

position:765411:-1
position: 765411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(768543..768632)
location: region:768543-768632:-1
so has part: feature:768543-768632:-1:exon
subclass of: SO_0000663

109488651
type: Gene
SIO_000068: ncbigene

position:768543:-1
position: 768543
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768632:-1
position: 768632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:768543-768632:-1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(768597..768599),aa:Tyr,seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: complement(join(768543..768578,768596..768632))
location: region:768543-768632:-1
so has part: feature:768596-768632:-1:exon
so has part: feature:768543-768578:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:768596-768632:-1:exon

position:768596:-1
position: 768596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:768543-768578:-1:exon

position:768578:-1
position: 768578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TRNAL-AAG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAL-AAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(774266..774347)
location: region:774266-774347:-1
so has part: feature:774266-774347:-1:exon
subclass of: SO_0000663

109488646
type: Gene
SIO_000068: ncbigene

position:774266:-1
position: 774266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774347:-1
position: 774347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:774266-774347:-1:exon

TRNAL-AAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAL-AAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon AAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(774311..774313),aa:Leu,seq:aag)
SIO_010081: TRNAL-AAG
subclass of: SO_0000673
so part of: TRNAL-AAG
location: complement(774266..774347)
location: region:774266-774347:-1
so has part: feature:774266-774347:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:774266-774347:-1:exon

TRNAL-UAG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAL-UAG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(779746..779827)
location: region:779746-779827:-1
so has part: feature:779746-779827:-1:exon
subclass of: SO_0000663

109488647
type: Gene
SIO_000068: ncbigene

position:779746:-1
position: 779746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779827:-1
position: 779827
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:779746-779827:-1:exon

TRNAL-UAG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAL-UAG
product: tRNA-Leu
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA leucine (anticodon UAG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(779791..779793),aa:Leu,seq:tag)
SIO_010081: TRNAL-UAG
subclass of: SO_0000673
so part of: TRNAL-UAG
location: complement(779746..779827)
location: region:779746-779827:-1
so has part: feature:779746-779827:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:779746-779827:-1:exon

TRNAT-UGU
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAT-UGU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 785877..785949
location: region:785877-785949:1
so has part: feature:785877-785949:1:exon
subclass of: SO_0000663

109488645
type: Gene
SIO_000068: ncbigene

position:785877:1
position: 785877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:785949:1
position: 785949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785877-785949:1:exon

TRNAT-UGU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAT-UGU
product: tRNA-Thr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:785910..785912,aa:Thr,seq:tgt)
SIO_010081: TRNAT-UGU
subclass of: SO_0000673
so part of: TRNAT-UGU
location: 785877..785949
location: region:785877-785949:1
so has part: feature:785877-785949:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785877-785949:1:exon

TRNAY-GUA
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAY-GUA
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 786895..786985
location: region:786895-786985:1
so has part: feature:786895-786985:1:exon
subclass of: SO_0000663

109488648
type: Gene
SIO_000068: ncbigene

position:786895:1
position: 786895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:786985:1
position: 786985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:786895-786985:1:exon

TRNAY-GUA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAY-GUA
product: tRNA-Tyr
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA tyrosine (anticodon GUA); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:786928..786930,aa:Tyr,seq:gta)
SIO_010081: TRNAY-GUA
subclass of: SO_0000673
so part of: TRNAY-GUA
location: join(786895..786931,786950..786985)
location: region:786895-786985:1
so has part: feature:786895-786931:1:exon
so has part: feature:786950-786985:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:786895-786931:1:exon

position:786931:1
position: 786931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:786950-786985:1:exon

position:786950:1
position: 786950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TRNAP-UGG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TRNAP-UGG
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 788166..788237
location: region:788166-788237:1
so has part: feature:788166-788237:1:exon
subclass of: SO_0000663

109488649
type: Gene
SIO_000068: ncbigene

position:788166:1
position: 788166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:788237:1
position: 788237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788166-788237:1:exon

TRNAP-UGG
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9646
gene: TRNAP-UGG
product: tRNA-Pro
inference: COORDINATES: profile:tRNAscan-SE:1.23
note: transfer RNA proline (anticodon UGG); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:788198..788200,aa:Pro,seq:tgg)
SIO_010081: TRNAP-UGG
subclass of: SO_0000673
so part of: TRNAP-UGG
location: 788166..788237
location: region:788166-788237:1
so has part: feature:788166-788237:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788166-788237:1:exon

ANG
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: ANG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 788699..801167
location: region:788699-801167:1
so has part: feature:788699-801167:1:exon
subclass of: SO_0000010

100466455
type: Gene
SIO_000068: ncbigene

position:788699:1
position: 788699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801167:1
position: 801167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788699-801167:1:exon

ANG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ANG
product: angiogenin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_011217890.3
SIO_010081: ANG
subclass of: SO_0000673
so part of: ANG
location: join(788699..788836,800555..801167)
location: region:788699-801167:1
so has part: feature:788699-788836:1:exon
so has part: feature:800555-801167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788699-788836:1:exon

position:788836:1
position: 788836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:800555-801167:1:exon

position:800555:1
position: 800555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RNASE4
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: RNASE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 788704..806987
location: region:788704-806987:1
so has part: feature:788704-806987:1:exon
subclass of: SO_0000010

105234286
type: Gene
SIO_000068: ncbigene

position:788704:1
position: 788704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806987:1
position: 806987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:788704-806987:1:exon

RNASE4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE4
product: ribonuclease A family member 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_019793740.2
SIO_010081: RNASE4
subclass of: SO_0000673
so part of: RNASE4
location: join(788704..788836,805727..806987)
location: region:788704-806987:1
so has part: feature:788704-788836:1:exon
so has part: feature:805727-806987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:788704-788836:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805727-806987:1:exon

position:805727:1
position: 805727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC109488644
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC109488644
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(791396..805824)
location: region:791396-805824:-1
so has part: feature:791396-805824:-1:exon
subclass of: SO_0000011

109488644
type: Gene
SIO_000068: ncbigene

position:791396:-1
position: 791396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:805824:-1
position: 805824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:791396-805824:-1:exon

LOC109488644
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC109488644
product: uncharacterized LOC109488644, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004622180.1
SIO_010081: LOC109488644
subclass of: SO_0000673
so part of: LOC109488644
location: complement(join(791396..791486,791807..792001,792402..792510,796669..796781,805693..805824))
location: region:791396-805824:-1
so has part: feature:805693-805824:-1:exon
so has part: feature:796669-796781:-1:exon
so has part: feature:792402-792510:-1:exon
so has part: feature:791807-792001:-1:exon
so has part: feature:791396-791486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805693-805824:-1:exon

position:805693:-1
position: 805693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:796669-796781:-1:exon

position:796669:-1
position: 796669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:796781:-1
position: 796781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:792402-792510:-1:exon

position:792402:-1
position: 792402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792510:-1
position: 792510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:791807-792001:-1:exon

position:791807:-1
position: 791807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:792001:-1
position: 792001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:791396-791486:-1:exon

position:791486:-1
position: 791486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC109488644
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC109488644
product: uncharacterized LOC109488644, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004622178.1
SIO_010081: LOC109488644
subclass of: SO_0000673
so part of: LOC109488644
location: complement(join(791396..791486,791807..792001,792402..792510,796669..796781,799876..799997,805693..805824))
location: region:791396-805824:-1
so has part: feature:805693-805824:-1:exon
so has part: feature:799876-799997:-1:exon
so has part: feature:796669-796781:-1:exon
so has part: feature:792402-792510:-1:exon
so has part: feature:791807-792001:-1:exon
so has part: feature:791396-791486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805693-805824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799876-799997:-1:exon

position:799876:-1
position: 799876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799997:-1
position: 799997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:796669-796781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792402-792510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:791807-792001:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:791396-791486:-1:exon

LOC109488644
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC109488644
product: uncharacterized LOC109488644, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004622179.1
SIO_010081: LOC109488644
subclass of: SO_0000673
so part of: LOC109488644
location: complement(join(791396..791486,791807..792004,792402..792510,796669..796781,799876..799997,805693..805824))
location: region:791396-805824:-1
so has part: feature:805693-805824:-1:exon
so has part: feature:799876-799997:-1:exon
so has part: feature:796669-796781:-1:exon
so has part: feature:792402-792510:-1:exon
so has part: feature:791807-792004:-1:exon
so has part: feature:791396-791486:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:805693-805824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:799876-799997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796669-796781:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792402-792510:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:791807-792004:-1:exon

position:792004:-1
position: 792004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:791396-791486:-1:exon

ANG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ANG
product: angiogenin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_011217892.3
SIO_010081: ANG
subclass of: SO_0000673
so part of: ANG
location: join(795269..795401,800555..801167)
location: region:795269-801167:1
so has part: feature:795269-795401:1:exon
so has part: feature:800555-801167:1:exon

position:795269:1
position: 795269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795269-795401:1:exon

position:795401:1
position: 795401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:800555-801167:1:exon

RNASE4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE4
product: ribonuclease A family member 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_019793741.2
SIO_010081: RNASE4
subclass of: SO_0000673
so part of: RNASE4
location: join(795271..795401,805727..806987)
location: region:795271-806987:1
so has part: feature:795271-795401:1:exon
so has part: feature:805727-806987:1:exon

position:795271:1
position: 795271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795271-795401:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:805727-806987:1:exon

ANG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ANG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiogenin
translation: MVKGLGPLLLVFMLGLGLTPPARAQDDSRYKHFLTQHSDAKPRGRNDRYCESMMERRGLTTPCKDTNTFIHGNKGSIKAICGNKNGNPYGEALRLSKSPFQVTTCRHVGGSPRPPCRYRATPGFRHIVVACEHGLPVHFDESFFRL
SIO_010081: ANG
subclass of: SO_0000673
so part of: ANG
location: 800573..801013
location: region:800573-801013:1
so has part: feature:800573-801013:1:exon

XP_011216192.1
type: Protein
SIO_000068: ncbiprotein

position:800573:1
position: 800573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:801013:1
position: 801013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800573-801013:1:exon

ANG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ANG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: angiogenin
translation: MVKGLGPLLLVFMLGLGLTPPARAQDDSRYKHFLTQHSDAKPRGRNDRYCESMMERRGLTTPCKDTNTFIHGNKGSIKAICGNKNGNPYGEALRLSKSPFQVTTCRHVGGSPRPPCRYRATPGFRHIVVACEHGLPVHFDESFFRL
SIO_010081: ANG
subclass of: SO_0000673
so part of: ANG
location: 800573..801013
location: region:800573-801013:1
so has part: feature:800573-801013:1:exon

XP_011216194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:800573-801013:1:exon

RNASE4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease 4
translation: MALHRTRSLLLLLLLTLLGLGLVQPSYGQDRMYQRFLRQHVDPEGTGGNDTYCNLMMQRRKMTTHQCKRFNTFVHEDIWSIRSICSTTNIQCKNGKMNCHEGVVKVTDCRETGSSSAPNCRYRASASTRHVVIACEGDPQLPVHFDR
SIO_010081: RNASE4
subclass of: SO_0000673
so part of: RNASE4
location: 805744..806187
location: region:805744-806187:1
so has part: feature:805744-806187:1:exon

XP_019649299.1
type: Protein
SIO_000068: ncbiprotein

position:805744:1
position: 805744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806187:1
position: 806187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805744-806187:1:exon

RNASE4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease 4
translation: MALHRTRSLLLLLLLTLLGLGLVQPSYGQDRMYQRFLRQHVDPEGTGGNDTYCNLMMQRRKMTTHQCKRFNTFVHEDIWSIRSICSTTNIQCKNGKMNCHEGVVKVTDCRETGSSSAPNCRYRASASTRHVVIACEGDPQLPVHFDR
SIO_010081: RNASE4
subclass of: SO_0000673
so part of: RNASE4
location: 805744..806187
location: region:805744-806187:1
so has part: feature:805744-806187:1:exon

XP_019649300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:805744-806187:1:exon

RNASE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: RNASE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(821889..830959)
location: region:821889-830959:-1
so has part: feature:821889-830959:-1:exon
subclass of: SO_0000010

100467619
type: Gene
SIO_000068: ncbigene

position:821889:-1
position: 821889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:830959:-1
position: 830959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:821889-830959:-1:exon

RNASE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE1
product: ribonuclease A family member 1, pancreatic, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_019808549.2
SIO_010081: RNASE1
subclass of: SO_0000673
so part of: RNASE1
location: complement(join(821889..822585,830670..830959))
location: region:821889-830959:-1
so has part: feature:830670-830959:-1:exon
so has part: feature:821889-822585:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:830670-830959:-1:exon

position:830670:-1
position: 830670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821889-822585:-1:exon

position:822585:-1
position: 822585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNASE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE1
product: ribonuclease A family member 1, pancreatic, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_011235536.2
SIO_010081: RNASE1
subclass of: SO_0000673
so part of: RNASE1
location: complement(join(821889..822585,823531..823635))
location: region:821889-823635:-1
so has part: feature:823531-823635:-1:exon
so has part: feature:821889-822585:-1:exon

position:823635:-1
position: 823635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823531-823635:-1:exon

position:823531:-1
position: 823531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821889-822585:-1:exon

RNASE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE1
product: ribonuclease A family member 1, pancreatic, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019808550.2
SIO_010081: RNASE1
subclass of: SO_0000673
so part of: RNASE1
location: complement(join(821889..822585,823184..823361))
location: region:821889-823361:-1
so has part: feature:823184-823361:-1:exon
so has part: feature:821889-822585:-1:exon

position:823361:-1
position: 823361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:823184-823361:-1:exon

position:823184:-1
position: 823184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:821889-822585:-1:exon

RNASE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease pancreatic
translation: MAQEKFFILFPLLVLVLLALGCVQPSLGKESRAKKFQRQHMDSDTSIVGSSYCNQMMKRRNMTAGWCKPVNTFVHEPLPDVQAVCLQKNVTCKNGQPDCHQSSSRMHITDCRLKRGSKYPKCEYQTEQKEKSIIVACGGNPYVPVHFDASV
SIO_010081: RNASE1
subclass of: SO_0000673
so part of: RNASE1
location: complement(822105..822560)
location: region:822105-822560:-1
so has part: feature:822105-822560:-1:exon

XP_019664108.1
type: Protein
SIO_000068: ncbiprotein

position:822105:-1
position: 822105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:822560:-1
position: 822560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:822105-822560:-1:exon

RNASE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease pancreatic
translation: MAQEKFFILFPLLVLVLLALGCVQPSLGKESRAKKFQRQHMDSDTSIVGSSYCNQMMKRRNMTAGWCKPVNTFVHEPLPDVQAVCLQKNVTCKNGQPDCHQSSSRMHITDCRLKRGSKYPKCEYQTEQKEKSIIVACGGNPYVPVHFDASV
SIO_010081: RNASE1
subclass of: SO_0000673
so part of: RNASE1
location: complement(822105..822560)
location: region:822105-822560:-1
so has part: feature:822105-822560:-1:exon

XP_019664109.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:822105-822560:-1:exon

RNASE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease pancreatic
translation: MAQEKFFILFPLLVLVLLALGCVQPSLGKESRAKKFQRQHMDSDTSIVGSSYCNQMMKRRNMTAGWCKPVNTFVHEPLPDVQAVCLQKNVTCKNGQPDCHQSSSRMHITDCRLKRGSKYPKCEYQTEQKEKSIIVACGGNPYVPVHFDASV
SIO_010081: RNASE1
subclass of: SO_0000673
so part of: RNASE1
location: complement(822105..822560)
location: region:822105-822560:-1
so has part: feature:822105-822560:-1:exon

XP_011233838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:822105-822560:-1:exon

LOC117797250
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(842829..852968)
location: region:842829-852968:-1
so has part: feature:842829-852968:-1:exon
subclass of: SO_0000010

117797250
type: Gene
SIO_000068: ncbigene

position:842829:-1
position: 842829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852968:-1
position: 852968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:842829-852968:-1:exon

LOC117797250
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9646
gene: LOC117797250
product: uncharacterized LOC117797250, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_004622190.1
SIO_010081: LOC117797250
so part of: LOC117797250
location: complement(join(842829..845829,852428..852968))
location: region:842829-852968:-1
so has part: feature:852428-852968:-1:exon
so has part: feature:842829-845829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852428-852968:-1:exon

position:852428:-1
position: 852428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842829-845829:-1:exon

position:845829:-1
position: 845829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC117797250
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797250
product: uncharacterized LOC117797250, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648581.1
SIO_010081: LOC117797250
subclass of: SO_0000673
so part of: LOC117797250
location: complement(join(842829..845829,846570..846755,852428..852968))
location: region:842829-852968:-1
so has part: feature:852428-852968:-1:exon
so has part: feature:846570-846755:-1:exon
so has part: feature:842829-845829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852428-852968:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846570-846755:-1:exon

position:846570:-1
position: 846570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:846755:-1
position: 846755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:842829-845829:-1:exon

LOC117797250
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9646
gene: LOC117797250
product: uncharacterized LOC117797250, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004622191.1
SIO_010081: LOC117797250
so part of: LOC117797250
location: complement(join(842829..845829,852183..852968))
location: region:842829-852968:-1
so has part: feature:852183-852968:-1:exon
so has part: feature:842829-845829:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:852183-852968:-1:exon

position:852183:-1
position: 852183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:842829-845829:-1:exon

LOC117797250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797250
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC117797250
translation: MMLFGLPGCSNNTPAALPLRPERPGPPRYSSGPFTPGAPPPRGRVTARAEQSGGSTRRASRLLHRNNTRTWGHSPGTRRCRRGGRGAGETAPLPPHPRWCRRVQLPPPPGPAGGAAPPFPARPGTRGDLWFFLRGGLPKAFRNPADFFHVAFTLKSGKKTSTVSFLRIRGKREARRSILGRNIHVREGRTDFCGCHLPGKHPFLGLPGNMNLTWTPLPFLLEQTSSPQACLSPHSRQTTPSHGSLEDTTDPGM
SIO_010081: LOC117797250
subclass of: SO_0000673
so part of: LOC117797250
location: complement(join(845690..845829,846570..846755,852428..852863))
location: region:845690-852863:-1
so has part: feature:852428-852863:-1:exon
so has part: feature:846570-846755:-1:exon
so has part: feature:845690-845829:-1:exon

XP_034504472.1
type: Protein
SIO_000068: ncbiprotein

position:845690:-1
position: 845690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:852863:-1
position: 852863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:852428-852863:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:846570-846755:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:845690-845829:-1:exon

METTL17
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: METTL17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 882002..888321
location: region:882002-888321:1
so has part: feature:882002-888321:1:exon
subclass of: SO_0000010

100467368
type: Gene
SIO_000068: ncbigene

position:882002:1
position: 882002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888321:1
position: 888321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882002-888321:1:exon

METTL17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: METTL17
product: methyltransferase like 17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_002927825.4
SIO_010081: METTL17
subclass of: SO_0000673
so part of: METTL17
location: join(882002..882117,882268..882421,882509..882643,883565..883646,883882..883963,884286..884359,884810..884904,885428..885498,885697..885804,886079..886147,887190..887240,887487..887579,887807..887994,888069..888321)
location: region:882002-888321:1
so has part: feature:882002-882117:1:exon
so has part: feature:882268-882421:1:exon
so has part: feature:882509-882643:1:exon
so has part: feature:883565-883646:1:exon
so has part: feature:883882-883963:1:exon
so has part: feature:884286-884359:1:exon
so has part: feature:884810-884904:1:exon
so has part: feature:885428-885498:1:exon
so has part: feature:885697-885804:1:exon
so has part: feature:886079-886147:1:exon
so has part: feature:887190-887240:1:exon
so has part: feature:887487-887579:1:exon
so has part: feature:887807-887994:1:exon
so has part: feature:888069-888321:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:882002-882117:1:exon

position:882117:1
position: 882117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:882268-882421:1:exon

position:882268:1
position: 882268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882421:1
position: 882421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:882509-882643:1:exon

position:882509:1
position: 882509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:882643:1
position: 882643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:883565-883646:1:exon

position:883565:1
position: 883565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883646:1
position: 883646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:883882-883963:1:exon

position:883882:1
position: 883882
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:883963:1
position: 883963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:884286-884359:1:exon

position:884286:1
position: 884286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884359:1
position: 884359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:884810-884904:1:exon

position:884810:1
position: 884810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:884904:1
position: 884904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:885428-885498:1:exon

position:885428:1
position: 885428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885498:1
position: 885498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:885697-885804:1:exon

position:885697:1
position: 885697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:885804:1
position: 885804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:886079-886147:1:exon

position:886079:1
position: 886079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:886147:1
position: 886147
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:887190-887240:1:exon

position:887190:1
position: 887190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887240:1
position: 887240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:887487-887579:1:exon

position:887487:1
position: 887487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887579:1
position: 887579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:887807-887994:1:exon

position:887807:1
position: 887807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:887994:1
position: 887994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:888069-888321:1:exon

position:888069:1
position: 888069
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: METTL17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 17, mitochondrial
translation: MATARGLRHLLTSSRWRRRGGEAPQSRALAAVVPGVSQVDNNKDFLGKKPHRQHPGILRLPCVEVPEALAAAAQLLLLEYSMPNVEKKVQALTNYLWSRRLPVEPEELQRRAVHLEEKFLENPDLLQVEEKLREAVLRALRKTTYHWQELSYNESLSLVYMAARLDGGFAAVSRAFHEIRARVPEFQPQTLMDFGSGTGSVTWAAHSAWGQSLREYMCVDSSAAMLVLAEKLLKGGSESGEPYVPGVFFRQFLPVSPKVQFDVVVSAFSLSELPSKADRTELVHTLWRKTSHFLILVENGTKAGHCLLMDARDLVLKGKEKSPLDPRPGFVFAPCPHELPCPQLTASKPLACSFSQAYHCIPFSWNKKNQKEEKFSMVILARGSPEEADRWPRITQPVLKRPRHVHCHLCCPDGHMQHAVITARQHGRDLYRCARVSSWGDRLPVITPSESELPPSLAEDPPGK
SIO_010081: METTL17
subclass of: SO_0000673
so part of: METTL17
location: join(882037..882117,882268..882421,882509..882643,883565..883646,883882..883963,884286..884359,884810..884904,885428..885498,885697..885804,886079..886147,887190..887240,887487..887579,887807..887994,888069..888180)
location: region:882037-888180:1
so has part: feature:882037-882117:1:exon
so has part: feature:882268-882421:1:exon
so has part: feature:882509-882643:1:exon
so has part: feature:883565-883646:1:exon
so has part: feature:883882-883963:1:exon
so has part: feature:884286-884359:1:exon
so has part: feature:884810-884904:1:exon
so has part: feature:885428-885498:1:exon
so has part: feature:885697-885804:1:exon
so has part: feature:886079-886147:1:exon
so has part: feature:887190-887240:1:exon
so has part: feature:887487-887579:1:exon
so has part: feature:887807-887994:1:exon
so has part: feature:888069-888180:1:exon

XP_002927871.3
type: Protein
SIO_000068: ncbiprotein

position:882037:1
position: 882037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:888180:1
position: 888180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:882037-882117:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:882268-882421:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:882509-882643:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:883565-883646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:883882-883963:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:884286-884359:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:884810-884904:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:885428-885498:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:885697-885804:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:886079-886147:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:887190-887240:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:887487-887579:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:887807-887994:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:888069-888180:1:exon

SLC39A2
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: SLC39A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 888475..892225
location: region:888475-892225:1
so has part: feature:888475-892225:1:exon
subclass of: SO_0000010

100466613
type: Gene
SIO_000068: ncbigene

position:888475:1
position: 888475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:892225:1
position: 892225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888475-892225:1:exon

SLC39A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: SLC39A2
product: solute carrier family 39 member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_034648490.1
SIO_010081: SLC39A2
subclass of: SO_0000673
so part of: SLC39A2
location: join(888475..888750,890053..890168,890354..890484,890688..890738,891302..891931)
location: region:888475-891931:1
so has part: feature:888475-888750:1:exon
so has part: feature:890053-890168:1:exon
so has part: feature:890354-890484:1:exon
so has part: feature:890688-890738:1:exon
so has part: feature:891302-891931:1:exon

position:891931:1
position: 891931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888475-888750:1:exon

position:888750:1
position: 888750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:890053-890168:1:exon

position:890053:1
position: 890053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890168:1
position: 890168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:890354-890484:1:exon

position:890354:1
position: 890354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890484:1
position: 890484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:890688-890738:1:exon

position:890688:1
position: 890688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:890738:1
position: 890738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:891302-891931:1:exon

position:891302:1
position: 891302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SLC39A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: SLC39A2
product: solute carrier family 39 member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_019808563.2
SIO_010081: SLC39A2
subclass of: SO_0000673
so part of: SLC39A2
location: join(888475..890168,890354..890484,890693..890738,891302..891437)
location: region:888475-891437:1
so has part: feature:888475-890168:1:exon
so has part: feature:890354-890484:1:exon
so has part: feature:890693-890738:1:exon
so has part: feature:891302-891437:1:exon

position:891437:1
position: 891437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:888475-890168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890354-890484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890693-890738:1:exon

position:890693:1
position: 890693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891302-891437:1:exon

SLC39A2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: SLC39A2
product: solute carrier family 39 member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_019808562.2
SIO_010081: SLC39A2
subclass of: SO_0000673
so part of: SLC39A2
location: join(890054..890168,890354..890484,890688..890738,891302..892225)
location: region:890054-892225:1
so has part: feature:890054-890168:1:exon
so has part: feature:890354-890484:1:exon
so has part: feature:890688-890738:1:exon
so has part: feature:891302-892225:1:exon

position:890054:1
position: 890054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890054-890168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890354-890484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890688-890738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891302-892225:1:exon

SLC39A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: SLC39A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter ZIP2 isoform X1
translation: MEPLLGVKIGCLFALLVLTLACGLIPICFKWFQIDAATGRHRRILSLLGCVSAGVFLGAGLMHMTAEALEGIDSEIQKFKMQNRTEKEGNASDDSESAQMEYPYGELVISLGFFFVFFLESLALQCCPGAAGGTPVQEEWSGTHVLELHSHGPLPLPSKRPLRALVLLLSLSFHSVFEGLAVGLQPTVATAVQLCLAVLAHKGLVVFGVGLRLVQIGTGSRWATVSILSLALMSPMGLVLGLAVTQGDSKGGQGLAQAVLEGVAAGTFLYVTFLEILPRELAGPEAPLAKWGCVAAGFAFMAFIALWA
SIO_010081: SLC39A2
subclass of: SO_0000673
so part of: SLC39A2
location: join(890054..890168,890354..890484,890688..890738,891302..891931)
location: region:890054-891931:1
so has part: feature:890054-890168:1:exon
so has part: feature:890354-890484:1:exon
so has part: feature:890688-890738:1:exon
so has part: feature:891302-891931:1:exon

XP_019664121.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:890054-890168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890354-890484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890688-890738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891302-891931:1:exon

SLC39A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: SLC39A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter ZIP2 isoform X1
translation: MEPLLGVKIGCLFALLVLTLACGLIPICFKWFQIDAATGRHRRILSLLGCVSAGVFLGAGLMHMTAEALEGIDSEIQKFKMQNRTEKEGNASDDSESAQMEYPYGELVISLGFFFVFFLESLALQCCPGAAGGTPVQEEWSGTHVLELHSHGPLPLPSKRPLRALVLLLSLSFHSVFEGLAVGLQPTVATAVQLCLAVLAHKGLVVFGVGLRLVQIGTGSRWATVSILSLALMSPMGLVLGLAVTQGDSKGGQGLAQAVLEGVAAGTFLYVTFLEILPRELAGPEAPLAKWGCVAAGFAFMAFIALWA
SIO_010081: SLC39A2
subclass of: SO_0000673
so part of: SLC39A2
location: join(890054..890168,890354..890484,890688..890738,891302..891931)
location: region:890054-891931:1
so has part: feature:890054-890168:1:exon
so has part: feature:890354-890484:1:exon
so has part: feature:890688-890738:1:exon
so has part: feature:891302-891931:1:exon

XP_034504381.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:890054-890168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890354-890484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890688-890738:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:891302-891931:1:exon

SLC39A2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: SLC39A2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc transporter ZIP2 isoform X2
translation: MEPLLGVKIGCLFALLVLTLACGLIPICFKWFQIDAATGRHRRILSLLGCVSAGVFLGAGLMHMTAEALEGIDSEIQKFKMQDRKGGKRF
SIO_010081: SLC39A2
subclass of: SO_0000673
so part of: SLC39A2
location: join(890054..890168,890354..890484,890693..890719)
location: region:890054-890719:1
so has part: feature:890054-890168:1:exon
so has part: feature:890354-890484:1:exon
so has part: feature:890693-890719:1:exon

XP_019664122.1
type: Protein
SIO_000068: ncbiprotein

position:890719:1
position: 890719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890054-890168:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:890354-890484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:890693-890719:1:exon

NDRG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: NDRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(897813..906625)
location: region:897813-906625:-1
so has part: feature:897813-906625:-1:exon
subclass of: SO_0000010

100466364
type: Gene
SIO_000068: ncbigene

position:897813:-1
position: 897813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:906625:-1
position: 906625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:897813-906625:-1:exon

NDRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: NDRG2
product: NDRG family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_034648528.1
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(897813..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,903599..903640,904010..904090,904809..904875,906472..906625))
location: region:897813-906625:-1
so has part: feature:906472-906625:-1:exon
so has part: feature:904809-904875:-1:exon
so has part: feature:904010-904090:-1:exon
so has part: feature:903599-903640:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:897813-898803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906472-906625:-1:exon

position:906472:-1
position: 906472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904809-904875:-1:exon

position:904809:-1
position: 904809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904875:-1
position: 904875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:904010-904090:-1:exon

position:904010:-1
position: 904010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904090:-1
position: 904090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:903599-903640:-1:exon

position:903599:-1
position: 903599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903640:-1
position: 903640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:903110-903215:-1:exon

position:903110:-1
position: 903110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:903215:-1
position: 903215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:902758-902878:-1:exon

position:902758:-1
position: 902758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902878:-1
position: 902878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:902510-902572:-1:exon

position:902510:-1
position: 902510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902572:-1
position: 902572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:901519-901579:-1:exon

position:901519:-1
position: 901519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901579:-1
position: 901579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:901207-901293:-1:exon

position:901207:-1
position: 901207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901293:-1
position: 901293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:901008-901064:-1:exon

position:901008:-1
position: 901008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:901064:-1
position: 901064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:900733-900836:-1:exon

position:900733:-1
position: 900733
reference: sequence
type: ReverseStrandPosition
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position:900836:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:900192-900236:-1:exon

position:900192:-1
position: 900192
reference: sequence
type: ReverseStrandPosition
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position:900236:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:899847-899898:-1:exon

position:899847:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899898:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:899534-899581:-1:exon

position:899534:-1
position: 899534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:899581:-1
position: 899581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:899249-899284:-1:exon

position:899249:-1
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reference: sequence
type: ReverseStrandPosition
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position:899284:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:899046-899097:-1:exon

position:899046:-1
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reference: sequence
type: ReverseStrandPosition
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position:899097:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 17
SIO_000628: feature:897813-898803:-1:exon

position:898803:-1
position: 898803
reference: sequence
type: ReverseStrandPosition
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NDRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: NDRG2
product: NDRG family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_034648529.1
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(897813..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,903599..903640,904010..904090,904809..904875,906260..906370))
location: region:897813-906370:-1
so has part: feature:906260-906370:-1:exon
so has part: feature:904809-904875:-1:exon
so has part: feature:904010-904090:-1:exon
so has part: feature:903599-903640:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:897813-898803:-1:exon

position:906370:-1
position: 906370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906260-906370:-1:exon

position:906260:-1
position: 906260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904809-904875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:904010-904090:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903599-903640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903110-903215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902758-902878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:897813-898803:-1:exon

NDRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: NDRG2
product: NDRG family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_034648530.1
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(897813..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,904010..904090,904809..904875,905822..905971))
location: region:897813-905971:-1
so has part: feature:905822-905971:-1:exon
so has part: feature:904809-904875:-1:exon
so has part: feature:904010-904090:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:897813-898803:-1:exon

position:905971:-1
position: 905971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:905822-905971:-1:exon

position:905822:-1
position: 905822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:904809-904875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:904010-904090:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903110-903215:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902758-902878:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901519-901579:-1:exon

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SIO_000300: 8
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:901008-901064:-1:exon

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SIO_000300: 10
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:897813-898803:-1:exon

NDRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: NDRG2
product: NDRG family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 41 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034648527.1
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(897813..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,903599..903640,904010..904090,904809..904875,905822..905971))
location: region:897813-905971:-1
so has part: feature:905822-905971:-1:exon
so has part: feature:904809-904875:-1:exon
so has part: feature:904010-904090:-1:exon
so has part: feature:903599-903640:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:897813-898803:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:905822-905971:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:904809-904875:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:904010-904090:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:903599-903640:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:903110-903215:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:902758-902878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:897813-898803:-1:exon

NDRG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: NDRG2
product: NDRG family member 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_011235529.1
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(897813..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902861,903110..903169))
location: region:897813-903169:-1
so has part: feature:903110-903169:-1:exon
so has part: feature:902758-902861:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:897813-898803:-1:exon

position:903169:-1
position: 903169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:903110-903169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:902758-902861:-1:exon

position:902861:-1
position: 902861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:897813-898803:-1:exon

NDRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: NDRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG2 isoform X2
translation: MAELQEVQITEEKPLLPGQTPEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQSLFQFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSAIIGVGVGAGAYVLSRYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSISEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNLERGGAVTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASIDGNRSRSRTLSQSSESGTLPSGPPGHTMEVSC
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(898637..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,904010..904084))
location: region:898637-904084:-1
so has part: feature:904010-904084:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:898637-898803:-1:exon

XP_034504421.1
type: Protein
SIO_000068: ncbiprotein

position:898637:-1
position: 898637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:904084:-1
position: 904084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:904010-904084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903110-903215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902758-902878:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:898637-898803:-1:exon

NDRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: NDRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG2 isoform X1
translation: MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQSLFQFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSAIIGVGVGAGAYVLSRYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSISEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNLERGGAVTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASIDGNRSRSRTLSQSSESGTLPSGPPGHTMEVSC
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(898637..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,903599..903640,904010..904084))
location: region:898637-904084:-1
so has part: feature:904010-904084:-1:exon
so has part: feature:903599-903640:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:898637-898803:-1:exon

XP_034504418.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:904010-904084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903599-903640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903110-903215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902758-902878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:898637-898803:-1:exon

NDRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: NDRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG2 isoform X1
translation: MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQSLFQFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSAIIGVGVGAGAYVLSRYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSISEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNLERGGAVTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASIDGNRSRSRTLSQSSESGTLPSGPPGHTMEVSC
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(898637..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,903599..903640,904010..904084))
location: region:898637-904084:-1
so has part: feature:904010-904084:-1:exon
so has part: feature:903599-903640:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:898637-898803:-1:exon

XP_034504419.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:904010-904084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903599-903640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903110-903215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902758-902878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:898637-898803:-1:exon

NDRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: NDRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG2 isoform X1
translation: MAELQEVQITEEKPLLPGQTPEAAKEAELAARILLDQGQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQSLFQFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSAIIGVGVGAGAYVLSRYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSISEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNLERGGAVTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASIDGNRSRSRTLSQSSESGTLPSGPPGHTMEVSC
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(898637..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902878,903110..903215,903599..903640,904010..904084))
location: region:898637-904084:-1
so has part: feature:904010-904084:-1:exon
so has part: feature:903599-903640:-1:exon
so has part: feature:903110-903215:-1:exon
so has part: feature:902758-902878:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:898637-898803:-1:exon

XP_034504420.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:904010-904084:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:903599-903640:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:903110-903215:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:902758-902878:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:898637-898803:-1:exon

NDRG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: NDRG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein NDRG2 isoform X3
translation: MAPPNPNAQRYSPTTMWDSTSLFQFGDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSAIIGVGVGAGAYVLSRYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLTGLTSSISEMILGHLFSQEELSGNSELIQKYRNIITHAPNLDNIELYWNSYNNRRDLNLERGGAVTLKCPVMLVVGDQAPHEDAVVECNSKLDPTQTSFLKMADSGGQPQLTQPGKLTEAFKYFLQGMGYMASSCMTRLSRSRTASLTSAASIDGNRSRSRTLSQSSESGTLPSGPPGHTMEVSC
SIO_010081: NDRG2
subclass of: SO_0000673
so part of: NDRG2
location: complement(join(898637..898803,899046..899097,899249..899284,899534..899581,899847..899898,900192..900236,900733..900836,901008..901064,901207..901293,901519..901579,902510..902572,902758..902861,903110..903169))
location: region:898637-903169:-1
so has part: feature:903110-903169:-1:exon
so has part: feature:902758-902861:-1:exon
so has part: feature:902510-902572:-1:exon
so has part: feature:901519-901579:-1:exon
so has part: feature:901207-901293:-1:exon
so has part: feature:901008-901064:-1:exon
so has part: feature:900733-900836:-1:exon
so has part: feature:900192-900236:-1:exon
so has part: feature:899847-899898:-1:exon
so has part: feature:899534-899581:-1:exon
so has part: feature:899249-899284:-1:exon
so has part: feature:899046-899097:-1:exon
so has part: feature:898637-898803:-1:exon

XP_011233831.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:903110-903169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:902758-902861:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:902510-902572:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:901519-901579:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:901207-901293:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:901008-901064:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:900733-900836:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:900192-900236:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:899847-899898:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:899534-899581:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:899249-899284:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:899046-899097:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:898637-898803:-1:exon

TPPP2
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TPPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 906054..912207
location: region:906054-912207:1
so has part: feature:906054-912207:1:exon
subclass of: SO_0000010

100466866
type: Gene
SIO_000068: ncbigene

position:906054:1
position: 906054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912207:1
position: 912207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:906054-912207:1:exon

TPPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TPPP2
product: tubulin polymerization promoting protein family member 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019808558.2
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(906054..906383,908885..909028,910555..910795,911045..911198,911930..912207)
location: region:906054-912207:1
so has part: feature:906054-906383:1:exon
so has part: feature:908885-909028:1:exon
so has part: feature:910555-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906054-906383:1:exon

position:906383:1
position: 906383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908885-909028:1:exon

position:908885:1
position: 908885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:909028:1
position: 909028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:910555-910795:1:exon

position:910555:1
position: 910555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:910795:1
position: 910795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:911045-911198:1:exon

position:911045:1
position: 911045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:911198:1
position: 911198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:911930-912207:1:exon

position:911930:1
position: 911930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TPPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TPPP2
product: tubulin polymerization promoting protein family member 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019808559.2
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(906054..906299,908885..909028,910555..910795,911045..911198,911930..912207)
location: region:906054-912207:1
so has part: feature:906054-906299:1:exon
so has part: feature:908885-909028:1:exon
so has part: feature:910555-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:906054-906299:1:exon

position:906299:1
position: 906299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:908885-909028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:910555-910795:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911045-911198:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:911930-912207:1:exon

TPPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TPPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polymerization-promoting protein family member 2 isoform X1
translation: MTNPRLRSPPRSFHSKALLLPLRVLPSPPPSPPSFPRTVLPPTQLIMASEAGKTFQRFAVFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFQEAMKELAQKRFKDKNPDEALENVYKLMEGKDPATTGVTKATTVGGVSRLTDTSKYTGTHKERFDESGKGKGIAGREETTDNSGYVSGYKGAGTYEKKSSK
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(908959..909028,910555..910795,911045..911198,911930..912118)
location: region:908959-912118:1
so has part: feature:908959-909028:1:exon
so has part: feature:910555-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912118:1:exon

XP_019664117.1
type: Protein
SIO_000068: ncbiprotein

position:908959:1
position: 908959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:912118:1
position: 912118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:908959-909028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910555-910795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911045-911198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911930-912118:1:exon

TPPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TPPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polymerization-promoting protein family member 2 isoform X1
translation: MTNPRLRSPPRSFHSKALLLPLRVLPSPPPSPPSFPRTVLPPTQLIMASEAGKTFQRFAVFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFQEAMKELAQKRFKDKNPDEALENVYKLMEGKDPATTGVTKATTVGGVSRLTDTSKYTGTHKERFDESGKGKGIAGREETTDNSGYVSGYKGAGTYEKKSSK
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(908959..909028,910555..910795,911045..911198,911930..912118)
location: region:908959-912118:1
so has part: feature:908959-909028:1:exon
so has part: feature:910555-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912118:1:exon

XP_019664118.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:908959-909028:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:910555-910795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911045-911198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911930-912118:1:exon

TPPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TPPP2
product: tubulin polymerization promoting protein family member 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_011235525.3
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(909648..909881,910555..910795,911045..911198,911930..912207)
location: region:909648-912207:1
so has part: feature:909648-909881:1:exon
so has part: feature:910555-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912207:1:exon

position:909648:1
position: 909648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:909648-909881:1:exon

position:909881:1
position: 909881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910555-910795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911045-911198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911930-912207:1:exon

TPPP2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TPPP2
product: tubulin polymerization promoting protein family member 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_019808561.2
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(910276..910357,910555..910795,911045..911198,911930..912207)
location: region:910276-912207:1
so has part: feature:910276-910357:1:exon
so has part: feature:910555-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912207:1:exon

position:910276:1
position: 910276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910276-910357:1:exon

position:910357:1
position: 910357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:910555-910795:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911045-911198:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:911930-912207:1:exon

TPPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TPPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polymerization-promoting protein family member 2 isoform X2
translation: MASEAGKTFQRFAVFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFQEAMKELAQKRFKDKNPDEALENVYKLMEGKDPATTGVTKATTVGGVSRLTDTSKYTGTHKERFDESGKGKGIAGREETTDNSGYVSGYKGAGTYEKKSSK
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(910623..910795,911045..911198,911930..912118)
location: region:910623-912118:1
so has part: feature:910623-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912118:1:exon

XP_019664120.1
type: Protein
SIO_000068: ncbiprotein

position:910623:1
position: 910623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:910623-910795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:911045-911198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911930-912118:1:exon

TPPP2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TPPP2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin polymerization-promoting protein family member 2 isoform X2
translation: MASEAGKTFQRFAVFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQQFQEAMKELAQKRFKDKNPDEALENVYKLMEGKDPATTGVTKATTVGGVSRLTDTSKYTGTHKERFDESGKGKGIAGREETTDNSGYVSGYKGAGTYEKKSSK
SIO_010081: TPPP2
subclass of: SO_0000673
so part of: TPPP2
location: join(910623..910795,911045..911198,911930..912118)
location: region:910623-912118:1
so has part: feature:910623-910795:1:exon
so has part: feature:911045-911198:1:exon
so has part: feature:911930-912118:1:exon

XP_011233827.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:910623-910795:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:911045-911198:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:911930-912118:1:exon

RNASE13
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: RNASE13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(912895..915093)
location: region:912895-915093:-1
so has part: feature:912895-915093:-1:exon
subclass of: SO_0000010

100467115
type: Gene
SIO_000068: ncbigene

position:912895:-1
position: 912895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:915093:-1
position: 915093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:912895-915093:-1:exon

RNASE13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE13
product: ribonuclease A family member 13 (inactive), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_019808548.1
SIO_010081: RNASE13
subclass of: SO_0000673
so part of: RNASE13
location: complement(join(912895..913588,913861..914307,914575..915093))
location: region:912895-915093:-1
so has part: feature:914575-915093:-1:exon
so has part: feature:913861-914307:-1:exon
so has part: feature:912895-913588:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:914575-915093:-1:exon

position:914575:-1
position: 914575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:913861-914307:-1:exon

position:913861:-1
position: 913861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914307:-1
position: 914307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:912895-913588:-1:exon

position:913588:-1
position: 913588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNASE13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: RNASE13
product: ribonuclease A family member 13 (inactive), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_011235526.3
SIO_010081: RNASE13
subclass of: SO_0000673
so part of: RNASE13
location: complement(join(912895..914307,914575..915092))
location: region:912895-915092:-1
so has part: feature:914575-915092:-1:exon
so has part: feature:912895-914307:-1:exon

position:915092:-1
position: 915092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:914575-915092:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:912895-914307:-1:exon

RNASE13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive ribonuclease-like protein 13 isoform X1
translation: MAPAVARVLFLQLVLGPTLVVDIKVQIAIKNFRMLHVDYPRVNYPEGFQGYCNGLMAYVRGRKQSWFCPQIHYTVHAPWGEIKRFCLYSDSFCENYDEYCTVTEDSFPVTICSLASGQPPVSCHYNDTLTNQRLYLLCSGKHDAEPIDGLTHPRS
SIO_010081: RNASE13
subclass of: SO_0000673
so part of: RNASE13
location: complement(join(913563..913588,913861..914302))
location: region:913563-914302:-1
so has part: feature:913861-914302:-1:exon
so has part: feature:913563-913588:-1:exon

XP_019664107.1
type: Protein
SIO_000068: ncbiprotein

position:913563:-1
position: 913563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:914302:-1
position: 914302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913861-914302:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:913563-913588:-1:exon

RNASE13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: RNASE13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: probable inactive ribonuclease-like protein 13 isoform X2
translation: MAPAVARVLFLQLVLGPTLVVDIKVQIAIKNFRMLHVDYPRVNYPEGFQGYCNGLMAYVRGRKQSWFCPQIHYTVHAPWGEIKRFCLYSDSFCENYDEYCTVTEDSFPVTICSLASGQPPVSCHYNDTLTNQRLYLLCSGKHDAEPIGIIGLY
SIO_010081: RNASE13
subclass of: SO_0000673
so part of: RNASE13
location: complement(913841..914302)
location: region:913841-914302:-1
so has part: feature:913841-914302:-1:exon

XP_011233828.1
type: Protein
SIO_000068: ncbiprotein

position:913841:-1
position: 913841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:913841-914302:-1:exon

LOC105241381
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC105241381
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(915904..919345)
location: region:915904-919345:-1
so has part: feature:915904-919345:-1:exon
subclass of: SO_0000011

105241381
type: Gene
SIO_000068: ncbigene

position:915904:-1
position: 915904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:919345:-1
position: 919345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:915904-919345:-1:exon

LOC105241381
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC105241381
product: uncharacterized LOC105241381, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_004622218.1
SIO_010081: LOC105241381
subclass of: SO_0000673
so part of: LOC105241381
location: complement(join(915904..917510,918354..918526,919238..919345))
location: region:915904-919345:-1
so has part: feature:919238-919345:-1:exon
so has part: feature:918354-918526:-1:exon
so has part: feature:915904-917510:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:919238-919345:-1:exon

position:919238:-1
position: 919238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:918354-918526:-1:exon

position:918354:-1
position: 918354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:918526:-1
position: 918526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:915904-917510:-1:exon

position:917510:-1
position: 917510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC105241381
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC105241381
product: uncharacterized LOC105241381, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_002144347.2
SIO_010081: LOC105241381
subclass of: SO_0000673
so part of: LOC105241381
location: complement(join(917536..917861,918354..918526,919238..919345))
location: region:917536-919345:-1
so has part: feature:919238-919345:-1:exon
so has part: feature:918354-918526:-1:exon
so has part: feature:917536-917861:-1:exon

position:917536:-1
position: 917536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:919238-919345:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:918354-918526:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:917536-917861:-1:exon

position:917861:-1
position: 917861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100468875
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100468875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 922981..923451
location: region:922981-923451:1
so has part: feature:922981-923451:1:exon
subclass of: SO_0000010

100468875
type: Gene
SIO_000068: ncbigene

position:922981:1
position: 922981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:923451:1
position: 923451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:922981-923451:1:exon

LOC100468875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100468875
product: ribonuclease 7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_011235523.2
SIO_010081: LOC100468875
subclass of: SO_0000673
so part of: LOC100468875
location: 922981..923451
location: region:922981-923451:1
so has part: feature:922981-923451:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:922981-923451:1:exon

LOC100468875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100468875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease 7
translation: MAAVSMGSCPLLLPLLLGLRVAEVPVRAKPSNMTSAQWFEIQHVQPKPQRCDAAMGKVNKYTKHCKPFNTFLHQSFSSVAATCQTPTVACKRGRRNCHQSKKPVSLSTCELTSRKYPGCKYKEKRQVASYIVACDPPEKGDSRKFKLVPVHVDKTL
SIO_010081: LOC100468875
subclass of: SO_0000673
so part of: LOC100468875
location: 922981..923451
location: region:922981-923451:1
so has part: feature:922981-923451:1:exon

XP_011233825.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:922981-923451:1:exon

LOC117797281
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 928301..937748
location: region:928301-937748:1
so has part: feature:928301-937748:1:exon
subclass of: SO_0000010

117797281
type: Gene
SIO_000068: ncbigene

position:928301:1
position: 928301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:937748:1
position: 937748
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928301-937748:1:exon

LOC117797281
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797281
product: ribonuclease 7-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648667.1
SIO_010081: LOC117797281
subclass of: SO_0000673
so part of: LOC117797281
location: join(928301..928373,937296..937748)
location: region:928301-937748:1
so has part: feature:928301-928373:1:exon
so has part: feature:937296-937748:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:928301-928373:1:exon

position:928373:1
position: 928373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:937296-937748:1:exon

position:937296:1
position: 937296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117797281
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797281
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribonuclease 7-like
translation: MKPQEREKTSLMGPCRKPIVPKTGERAAARAGSCPMRQPLLLGLWVAEVPVRAKPSHMTSAQGFETQHMQPRPQGCNTAMGNVNKSTTHCKGPSTFLHESFSRVATTCQTPTVACKNAQENCHLGQGVQTAV
SIO_010081: LOC117797281
subclass of: SO_0000673
so part of: LOC117797281
location: join(928301..928373,937296..937621)
location: region:928301-937621:1
so has part: feature:928301-928373:1:exon
so has part: feature:937296-937621:1:exon

XP_034504558.1
type: Protein
SIO_000068: ncbiprotein

position:937621:1
position: 937621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:928301-928373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:937296-937621:1:exon

ARHGEF40
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: ARHGEF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 950180..968207
location: region:950180-968207:1
so has part: feature:950180-968207:1:exon
subclass of: SO_0000010

100468626
type: Gene
SIO_000068: ncbigene

position:950180:1
position: 950180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:968207:1
position: 968207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950180-968207:1:exon

ARHGEF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ARHGEF40
product: Rho guanine nucleotide exchange factor 40, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_034648436.1
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950180..950221,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967561,967794..968207)
location: region:950180-968207:1
so has part: feature:950180-950221:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967561:1:exon
so has part: feature:967794-968207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950180-950221:1:exon

position:950221:1
position: 950221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

position:952798:1
position: 952798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:952995:1
position: 952995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

position:953599:1
position: 953599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954844:1
position: 954844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

position:954982:1
position: 954982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955149:1
position: 955149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

position:955291:1
position: 955291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:955411:1
position: 955411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

position:955995:1
position: 955995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956091:1
position: 956091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

position:956200:1
position: 956200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956280:1
position: 956280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

position:956406:1
position: 956406
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:956522:1
position: 956522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

position:957596:1
position: 957596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957691:1
position: 957691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

position:957780:1
position: 957780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:957895:1
position: 957895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

position:958244:1
position: 958244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:958370:1
position: 958370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

position:959962:1
position: 959962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960084:1
position: 960084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

position:960186:1
position: 960186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:960329:1
position: 960329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

position:960824:1
position: 960824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961434:1
position: 961434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

position:961556:1
position: 961556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:961790:1
position: 961790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

position:962127:1
position: 962127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:962213:1
position: 962213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

position:962788:1
position: 962788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963003:1
position: 963003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

position:963723:1
position: 963723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:963893:1
position: 963893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

position:965073:1
position: 965073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:965250:1
position: 965250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

position:966011:1
position: 966011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966115:1
position: 966115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

position:966339:1
position: 966339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:966482:1
position: 966482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

position:966987:1
position: 966987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967117:1
position: 967117
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967561:1:exon

position:967515:1
position: 967515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967561:1
position: 967561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:967794-968207:1:exon

position:967794:1
position: 967794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ARHGEF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 40 isoform X2
translation: MEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLAKVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLALKCLAPGGGRVQELPVPHEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAELICPRFVHKGGLMVGHRPSTLPPELPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEGEYVELLEVTLPVRGSPTDAEGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRDQDGARPPGEGSSTRASPGSPPGAEALPEATALEVSESAAEVLGAASESCPLRPGGAGGGAGQAAEGPPGTPRRTGKGNRRKKRAAGRGALSRGGDSVPLSPGDKEEASHQEVLVSLPPPNEHELPGCSPVEGEHKGSGKPESEPKEELKPADKKEPQPPEACGPIDETARERDPEGPSLACVAGPTGPDGLLPDPPTLPLETVQEVEGDSVPEEASPVSISDDPDVVWDLMASGFLVLTGGVDQCGRALLTITPPCPPEEPPPSRDMLSTALHYLHSLLRPDLQMLGLSVLLDLRKAPPLPPALVAVLGQLQDSGDPPLIQRLLVLTHDCPLTELHGLQGTELLSESDLKRVAKPEELPWDLGGHKEPSPSYWVETHQEVARLGRLCRGVLGSVRQAIEELEGAAEPEGEEAVGMLEPLQKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPAALYQEVDEAIHQLVRLSNLHAQQQERRQRLHRLEQVLQWLSGPGEERLASFAVPGDSLSALQETELQFRAFSTEVQERLAQAREALALEEDAASQKVLDVFEQRLEQAESGLHRGLRLQRFFQQAHEWVNEGSARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRGHRRQRADSASSGGAPRGSHSPSPSLSSLLLPSSPGPHAAPSHCSLAPCGEDCEEEGPDLAPEVEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWAVGTPRMERKRSISAQQRLVSELIACEQEYVATLSEPVPPPGPELTPELRGTWAAALSIRERLRSFHRTHFLRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLASLGPPTKGSTESGPHLPRALQQPLEQLARYGRLLEELLREAGPELGSERQALGAAVQLLREQETRGRDLLAVEAVRGCETDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEQLLLFSKLKGPEGGSESFVYKQAFKTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEVKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRNSPSLQPPHPGSSTPTLAGGGILGLSRQSHARALSDPTTPL
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950219..950221,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967556)
location: region:950219-967556:1
so has part: feature:950219-950221:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967556:1:exon

XP_034504327.1
type: Protein
SIO_000068: ncbiprotein

position:950219:1
position: 950219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:967556:1
position: 967556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950219-950221:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967556:1:exon

ARHGEF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ARHGEF40
product: Rho guanine nucleotide exchange factor 40, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034648433.1
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950860..950982,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967561,967676..968207)
location: region:950860-968207:1
so has part: feature:950860-950982:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967561:1:exon
so has part: feature:967676-968207:1:exon

position:950860:1
position: 950860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950860-950982:1:exon

position:950982:1
position: 950982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967561:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:967676-968207:1:exon

position:967676:1
position: 967676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ARHGEF40
product: Rho guanine nucleotide exchange factor 40, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_034648432.1
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950860..950982,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967561,967794..968207)
location: region:950860-968207:1
so has part: feature:950860-950982:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967561:1:exon
so has part: feature:967794-968207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950860-950982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967561:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:967794-968207:1:exon

ARHGEF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ARHGEF40
product: Rho guanine nucleotide exchange factor 40, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_034648435.1
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950860..950982,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967561,968021..968207)
location: region:950860-968207:1
so has part: feature:950860-950982:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967561:1:exon
so has part: feature:968021-968207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950860-950982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967561:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:968021-968207:1:exon

position:968021:1
position: 968021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ARHGEF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ARHGEF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 40 isoform X1
translation: MGGKSAPEHSLQGTEALSQSTPAAEGREHQREDPQEEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLAKVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLALKCLAPGGGRVQELPVPHEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAELICPRFVHKGGLMVGHRPSTLPPELPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEGEYVELLEVTLPVRGSPTDAEGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRDQDGARPPGEGSSTRASPGSPPGAEALPEATALEVSESAAEVLGAASESCPLRPGGAGGGAGQAAEGPPGTPRRTGKGNRRKKRAAGRGALSRGGDSVPLSPGDKEEASHQEVLVSLPPPNEHELPGCSPVEGEHKGSGKPESEPKEELKPADKKEPQPPEACGPIDETARERDPEGPSLACVAGPTGPDGLLPDPPTLPLETVQEVEGDSVPEEASPVSISDDPDVVWDLMASGFLVLTGGVDQCGRALLTITPPCPPEEPPPSRDMLSTALHYLHSLLRPDLQMLGLSVLLDLRKAPPLPPALVAVLGQLQDSGDPPLIQRLLVLTHDCPLTELHGLQGTELLSESDLKRVAKPEELPWDLGGHKEPSPSYWVETHQEVARLGRLCRGVLGSVRQAIEELEGAAEPEGEEAVGMLEPLQKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPAALYQEVDEAIHQLVRLSNLHAQQQERRQRLHRLEQVLQWLSGPGEERLASFAVPGDSLSALQETELQFRAFSTEVQERLAQAREALALEEDAASQKVLDVFEQRLEQAESGLHRGLRLQRFFQQAHEWVNEGSARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRGHRRQRADSASSGGAPRGSHSPSPSLSSLLLPSSPGPHAAPSHCSLAPCGEDCEEEGPDLAPEVEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWAVGTPRMERKRSISAQQRLVSELIACEQEYVATLSEPVPPPGPELTPELRGTWAAALSIRERLRSFHRTHFLRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLASLGPPTKGSTESGPHLPRALQQPLEQLARYGRLLEELLREAGPELGSERQALGAAVQLLREQETRGRDLLAVEAVRGCETDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEQLLLFSKLKGPEGGSESFVYKQAFKTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEVKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRNSPSLQPPHPGSSTPTLAGGGILGLSRQSHARALSDPTTPL
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950875..950982,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967556)
location: region:950875-967556:1
so has part: feature:950875-950982:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967556:1:exon

XP_034504323.1
type: Protein
SIO_000068: ncbiprotein

position:950875:1
position: 950875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950875-950982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967556:1:exon

ARHGEF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ARHGEF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 40 isoform X1
translation: MGGKSAPEHSLQGTEALSQSTPAAEGREHQREDPQEEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLAKVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLALKCLAPGGGRVQELPVPHEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAELICPRFVHKGGLMVGHRPSTLPPELPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEGEYVELLEVTLPVRGSPTDAEGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRDQDGARPPGEGSSTRASPGSPPGAEALPEATALEVSESAAEVLGAASESCPLRPGGAGGGAGQAAEGPPGTPRRTGKGNRRKKRAAGRGALSRGGDSVPLSPGDKEEASHQEVLVSLPPPNEHELPGCSPVEGEHKGSGKPESEPKEELKPADKKEPQPPEACGPIDETARERDPEGPSLACVAGPTGPDGLLPDPPTLPLETVQEVEGDSVPEEASPVSISDDPDVVWDLMASGFLVLTGGVDQCGRALLTITPPCPPEEPPPSRDMLSTALHYLHSLLRPDLQMLGLSVLLDLRKAPPLPPALVAVLGQLQDSGDPPLIQRLLVLTHDCPLTELHGLQGTELLSESDLKRVAKPEELPWDLGGHKEPSPSYWVETHQEVARLGRLCRGVLGSVRQAIEELEGAAEPEGEEAVGMLEPLQKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPAALYQEVDEAIHQLVRLSNLHAQQQERRQRLHRLEQVLQWLSGPGEERLASFAVPGDSLSALQETELQFRAFSTEVQERLAQAREALALEEDAASQKVLDVFEQRLEQAESGLHRGLRLQRFFQQAHEWVNEGSARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRGHRRQRADSASSGGAPRGSHSPSPSLSSLLLPSSPGPHAAPSHCSLAPCGEDCEEEGPDLAPEVEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWAVGTPRMERKRSISAQQRLVSELIACEQEYVATLSEPVPPPGPELTPELRGTWAAALSIRERLRSFHRTHFLRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLASLGPPTKGSTESGPHLPRALQQPLEQLARYGRLLEELLREAGPELGSERQALGAAVQLLREQETRGRDLLAVEAVRGCETDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEQLLLFSKLKGPEGGSESFVYKQAFKTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEVKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRNSPSLQPPHPGSSTPTLAGGGILGLSRQSHARALSDPTTPL
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950875..950982,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967556)
location: region:950875-967556:1
so has part: feature:950875-950982:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967556:1:exon

XP_034504324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950875-950982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967556:1:exon

ARHGEF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ARHGEF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 40 isoform X1
translation: MGGKSAPEHSLQGTEALSQSTPAAEGREHQREDPQEEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDALRYTLDFLVPAKHLLAKVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDFYLQVVPSAAQAPRLALKCLAPGGGRVQELPVPHEACAYLFTPEWLQGINKDRPTGRLSTCLLSAPSGIQRLPWAELICPRFVHKGGLMVGHRPSTLPPELPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEGEYVELLEVTLPVRGSPTDAEGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRDQDGARPPGEGSSTRASPGSPPGAEALPEATALEVSESAAEVLGAASESCPLRPGGAGGGAGQAAEGPPGTPRRTGKGNRRKKRAAGRGALSRGGDSVPLSPGDKEEASHQEVLVSLPPPNEHELPGCSPVEGEHKGSGKPESEPKEELKPADKKEPQPPEACGPIDETARERDPEGPSLACVAGPTGPDGLLPDPPTLPLETVQEVEGDSVPEEASPVSISDDPDVVWDLMASGFLVLTGGVDQCGRALLTITPPCPPEEPPPSRDMLSTALHYLHSLLRPDLQMLGLSVLLDLRKAPPLPPALVAVLGQLQDSGDPPLIQRLLVLTHDCPLTELHGLQGTELLSESDLKRVAKPEELPWDLGGHKEPSPSYWVETHQEVARLGRLCRGVLGSVRQAIEELEGAAEPEGEEAVGMLEPLQKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPAALYQEVDEAIHQLVRLSNLHAQQQERRQRLHRLEQVLQWLSGPGEERLASFAVPGDSLSALQETELQFRAFSTEVQERLAQAREALALEEDAASQKVLDVFEQRLEQAESGLHRGLRLQRFFQQAHEWVNEGSARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRGHRRQRADSASSGGAPRGSHSPSPSLSSLLLPSSPGPHAAPSHCSLAPCGEDCEEEGPDLAPEVEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWAVGTPRMERKRSISAQQRLVSELIACEQEYVATLSEPVPPPGPELTPELRGTWAAALSIRERLRSFHRTHFLRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLASLGPPTKGSTESGPHLPRALQQPLEQLARYGRLLEELLREAGPELGSERQALGAAVQLLREQETRGRDLLAVEAVRGCETDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEQLLLFSKLKGPEGGSESFVYKQAFKTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEVKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRNSPSLQPPHPGSSTPTLAGGGILGLSRQSHARALSDPTTPL
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(950875..950982,952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967556)
location: region:950875-967556:1
so has part: feature:950875-950982:1:exon
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967556:1:exon

XP_034504326.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:950875-950982:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967515-967556:1:exon

ARHGEF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ARHGEF40
product: Rho guanine nucleotide exchange factor 40, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_019808557.2
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(952798..952995,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966987..967117,967515..967561,967794..968207)
location: region:952798-968207:1
so has part: feature:952798-952995:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967561:1:exon
so has part: feature:967794-968207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952798-952995:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:967515-967561:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967794-968207:1:exon

ARHGEF40
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ARHGEF40
product: Rho guanine nucleotide exchange factor 40, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_034648437.1
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(952798..952931,953599..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967561,967794..968207)
location: region:952798-968207:1
so has part: feature:952798-952931:1:exon
so has part: feature:953599-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967561:1:exon
so has part: feature:967794-968207:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952798-952931:1:exon

position:952931:1
position: 952931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:953599-954844:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:967515-967561:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:967794-968207:1:exon

ARHGEF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ARHGEF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 40 isoform X3
translation: MVGHRPSTLPPELPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEGEYVELLEVTLPVRGSPTDAEGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRDQDGARPPGEGSSTRASPGSPPGAEALPEATALEVSESAAEVLGAASESCPLRPGGAGGGAGQAAEGPPGTPRRTGKGNRRKKRAAGRGALSRGGDSVPLSPGDKEEASHQEVLVSLPPPNEHELPGCSPVEGEHKGSGKPESEPKEELKPADKKEPQPPEACGPIDETARERDPEGPSLACVAGPTGPDGLLPDPPTLPLETVQEVEGDSVPEEASPVSISDDPDVVWDLMASGFLVLTGGVDQCGRALLTITPPCPPEEPPPSRDMLSTALHYLHSLLRPDLQMLGLSVLLDLRKAPPLPPALVAVLGQLQDSGDPPLIQRLLVLTHDCPLTELHGLQGTELLSESDLKRVAKPEELPWDLGGHKEPSPSYWVETHQEVARLGRLCRGVLGSVRQAIEELEGAAEPEGEEAVGMLEPLQKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPAALYQEVDEAIHQLVRLSNLHAQQQERRQRLHRLEQVLQWLSGPGEERLASFAVPGDSLSALQETELQFRAFSTEVQERLAQAREALALEEDAASQKVLDVFEQRLEQAESGLHRGLRLQRFFQQAHEWVNEGSARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRGHRRQRADSASSGGAPRGSHSPSPSLSSLLLPSSPGPHAAPSHCSLAPCGEDCEEEGPDLAPEVEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWAVGTPRMERKRSISAQQRLVSELIACEQEYVATLSEPVPPPGPELTPELRGTWAAALSIRERLRSFHRTHFLRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLASLGPPTKGSTESGPHLPRALQQPLEQLARYGRLLEELLREAGPELGSERQALGAAVQLLREQETRGRDLLAVEAVRGCETDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEQLLLFSKLKGPEGGSESFVYKQAFKTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEVKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAGPSLPGLSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRNSPSLQPPHPGSSTPTLAGGGILGLSRQSHARALSDPTTPL
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(953974..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966339..966482,966987..967117,967515..967556)
location: region:953974-967556:1
so has part: feature:953974-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966339-966482:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967556:1:exon

XP_034504328.1
type: Protein
SIO_000068: ncbiprotein

position:953974:1
position: 953974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:953974-954844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966339-966482:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:967515-967556:1:exon

ARHGEF40
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ARHGEF40
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rho guanine nucleotide exchange factor 40 isoform X4
translation: MVGHRPSTLPPELPSGPPGLPSPPLPEEALGTRSPGDGHNAPAEGPEGEYVELLEVTLPVRGSPTDAEGSSGLSRTRTVPTRKGAGGKGRHRRHRAWMHQKGLGPRDQDGARPPGEGSSTRASPGSPPGAEALPEATALEVSESAAEVLGAASESCPLRPGGAGGGAGQAAEGPPGTPRRTGKGNRRKKRAAGRGALSRGGDSVPLSPGDKEEASHQEVLVSLPPPNEHELPGCSPVEGEHKGSGKPESEPKEELKPADKKEPQPPEACGPIDETARERDPEGPSLACVAGPTGPDGLLPDPPTLPLETVQEVEGDSVPEEASPVSISDDPDVVWDLMASGFLVLTGGVDQCGRALLTITPPCPPEEPPPSRDMLSTALHYLHSLLRPDLQMLGLSVLLDLRKAPPLPPALVAVLGQLQDSGDPPLIQRLLVLTHDCPLTELHGLQGTELLSESDLKRVAKPEELPWDLGGHKEPSPSYWVETHQEVARLGRLCRGVLGSVRQAIEELEGAAEPEGEEAVGMLEPLQKVLADPRLTELQRDGGAILMRLRSTHSSKLEGPGPAALYQEVDEAIHQLVRLSNLHAQQQERRQRLHRLEQVLQWLSGPGEERLASFAVPGDSLSALQETELQFRAFSTEVQERLAQAREALALEEDAASQKVLDVFEQRLEQAESGLHRGLRLQRFFQQAHEWVNEGSARLAGAGPGREAVLAALALRRAPEPSAGTFQEMRALALDLGSPAALREWGRCRARCQELERRIQQQLGEEASPRGHRRQRADSASSGGAPRGSHSPSPSLSSLLLPSSPGPHAAPSHCSLAPCGEDCEEEGPDLAPEVEGRPPRTVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWAVGTPRMERKRSISAQQRLVSELIACEQEYVATLSEPVPPPGPELTPELRGTWAAALSIRERLRSFHRTHFLRELQGCATHPLRIGACFLRHGDQFSLYAQYVKHRHKLENGLASLGPPTKGSTESGPHLPRALQQPLEQLARYGRLLEELLREAGPELGSERQALGAAVQLLREQETRGRDLLAVEAVRGCETDLKEQGQLLHRDPFTVICGRKKCLRHVFLFEQLLLFSKLKGPEGGSESFVYKQAFKTADMGLTENIGDSGLCFELWFRRRRAREAYTLQAASPEVKLKWTSSIAQLLWRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAPETLDSSGDVSPGPRNSPSLQPPHPGSSTPTLAGGGILGLSRQSHARALSDPTTPL
SIO_010081: ARHGEF40
subclass of: SO_0000673
so part of: ARHGEF40
location: join(953974..954844,954982..955149,955291..955411,955995..956091,956200..956280,956406..956522,957596..957691,957780..957895,958244..958370,959962..960084,960186..960329,960824..961434,961556..961790,962127..962213,962788..963003,963723..963893,965073..965250,966011..966115,966987..967117,967515..967556)
location: region:953974-967556:1
so has part: feature:953974-954844:1:exon
so has part: feature:954982-955149:1:exon
so has part: feature:955291-955411:1:exon
so has part: feature:955995-956091:1:exon
so has part: feature:956200-956280:1:exon
so has part: feature:956406-956522:1:exon
so has part: feature:957596-957691:1:exon
so has part: feature:957780-957895:1:exon
so has part: feature:958244-958370:1:exon
so has part: feature:959962-960084:1:exon
so has part: feature:960186-960329:1:exon
so has part: feature:960824-961434:1:exon
so has part: feature:961556-961790:1:exon
so has part: feature:962127-962213:1:exon
so has part: feature:962788-963003:1:exon
so has part: feature:963723-963893:1:exon
so has part: feature:965073-965250:1:exon
so has part: feature:966011-966115:1:exon
so has part: feature:966987-967117:1:exon
so has part: feature:967515-967556:1:exon

XP_019664116.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:953974-954844:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954982-955149:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:955291-955411:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:955995-956091:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:956200-956280:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:956406-956522:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:957596-957691:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:957780-957895:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:958244-958370:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:959962-960084:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:960186-960329:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:960824-961434:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:961556-961790:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:962127-962213:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:962788-963003:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:963723-963893:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:965073-965250:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:966011-966115:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:966987-967117:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:967515-967556:1:exon

ZNF219
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: ZNF219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(968727..982664)
location: region:968727-982664:-1
so has part: feature:968727-982664:-1:exon
subclass of: SO_0000010

100468375
type: Gene
SIO_000068: ncbigene

position:968727:-1
position: 968727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982664:-1
position: 982664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:968727-982664:-1:exon

ZNF219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ZNF219
product: zinc finger protein 219, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_034648439.1
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(968727..969787,970017..970148,970448..971855,972124..972215,982530..982664))
location: region:968727-982664:-1
so has part: feature:982530-982664:-1:exon
so has part: feature:972124-972215:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:968727-969787:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982530-982664:-1:exon

position:982530:-1
position: 982530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972124-972215:-1:exon

position:972124:-1
position: 972124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972215:-1
position: 972215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:970448-971855:-1:exon

position:970448:-1
position: 970448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:971855:-1
position: 971855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:970017-970148:-1:exon

position:970017:-1
position: 970017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:970148:-1
position: 970148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:968727-969787:-1:exon

position:969787:-1
position: 969787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ZNF219
product: zinc finger protein 219, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_002927829.4
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(968727..969787,970017..970148,970448..971855,972124..972215,976902..977441))
location: region:968727-977441:-1
so has part: feature:976902-977441:-1:exon
so has part: feature:972124-972215:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:968727-969787:-1:exon

position:977441:-1
position: 977441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976902-977441:-1:exon

position:976902:-1
position: 976902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972124-972215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970448-971855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970017-970148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968727-969787:-1:exon

ZNF219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ZNF219
product: zinc finger protein 219, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_034648440.1
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(968727..969787,970017..970148,970448..971855,972124..972215,976474..976554))
location: region:968727-976554:-1
so has part: feature:976474-976554:-1:exon
so has part: feature:972124-972215:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:968727-969787:-1:exon

position:976554:-1
position: 976554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976474-976554:-1:exon

position:976474:-1
position: 976474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:972124-972215:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970448-971855:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:970017-970148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:968727-969787:-1:exon

ZNF219
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: ZNF219
product: zinc finger protein 219, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_034648438.1
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(968727..969787,970017..970148,970448..971855,972124..976421))
location: region:968727-976421:-1
so has part: feature:972124-976421:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:968727-969787:-1:exon

position:976421:-1
position: 976421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972124-976421:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970448-971855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970017-970148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:968727-969787:-1:exon

ZNF219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ZNF219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 219
translation: MEGSRPRAPGGHLAPSPPAFDGELDLQRYSNGPGVSAGSPGMGAVGWSESRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSSGGMQSTPATEGLARSQAPSSAAFRCPFCKGKFRTAAERERHLHILHRPWKCGLCSFGSSQEEELLHHSLTAHGAPERPLAATSAAPQPQPPPQPEPRSVPESEPEPEREAVPAPAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHASKLGPLRAPGPGSGAARAPQPPDLGLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSLRAGEARPNGEGAEPGAGRSFGSFRPLPSALPARARRHRAEEPEEEEEVVEAEEETWARSRALGPLASLHPRPGEGPGHSAPAAGTQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAQQSGAKPAPQTATWVEGAANPRPPTSAAPGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRPPQADASPPYAPAQSGETPPSPCPPQEGEEGPGLSRSGEAGLGGQER
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(969180..969787,970017..970148,970448..971855,972124..972129))
location: region:969180-972129:-1
so has part: feature:972124-972129:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:969180-969787:-1:exon

XP_034504329.1
type: Protein
SIO_000068: ncbiprotein

position:969180:-1
position: 969180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:972129:-1
position: 972129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972124-972129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970448-971855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970017-970148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969180-969787:-1:exon

ZNF219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ZNF219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 219
translation: MEGSRPRAPGGHLAPSPPAFDGELDLQRYSNGPGVSAGSPGMGAVGWSESRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSSGGMQSTPATEGLARSQAPSSAAFRCPFCKGKFRTAAERERHLHILHRPWKCGLCSFGSSQEEELLHHSLTAHGAPERPLAATSAAPQPQPPPQPEPRSVPESEPEPEREAVPAPAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHASKLGPLRAPGPGSGAARAPQPPDLGLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSLRAGEARPNGEGAEPGAGRSFGSFRPLPSALPARARRHRAEEPEEEEEVVEAEEETWARSRALGPLASLHPRPGEGPGHSAPAAGTQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAQQSGAKPAPQTATWVEGAANPRPPTSAAPGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRPPQADASPPYAPAQSGETPPSPCPPQEGEEGPGLSRSGEAGLGGQER
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(969180..969787,970017..970148,970448..971855,972124..972129))
location: region:969180-972129:-1
so has part: feature:972124-972129:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:969180-969787:-1:exon

XP_034504330.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972124-972129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970448-971855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970017-970148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969180-969787:-1:exon

ZNF219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ZNF219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 219
translation: MEGSRPRAPGGHLAPSPPAFDGELDLQRYSNGPGVSAGSPGMGAVGWSESRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSSGGMQSTPATEGLARSQAPSSAAFRCPFCKGKFRTAAERERHLHILHRPWKCGLCSFGSSQEEELLHHSLTAHGAPERPLAATSAAPQPQPPPQPEPRSVPESEPEPEREAVPAPAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHASKLGPLRAPGPGSGAARAPQPPDLGLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSLRAGEARPNGEGAEPGAGRSFGSFRPLPSALPARARRHRAEEPEEEEEVVEAEEETWARSRALGPLASLHPRPGEGPGHSAPAAGTQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAQQSGAKPAPQTATWVEGAANPRPPTSAAPGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRPPQADASPPYAPAQSGETPPSPCPPQEGEEGPGLSRSGEAGLGGQER
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(969180..969787,970017..970148,970448..971855,972124..972129))
location: region:969180-972129:-1
so has part: feature:972124-972129:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:969180-969787:-1:exon

XP_002927875.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972124-972129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970448-971855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970017-970148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969180-969787:-1:exon

ZNF219
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: ZNF219
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 219
translation: MEGSRPRAPGGHLAPSPPAFDGELDLQRYSNGPGVSAGSPGMGAVGWSESRAGERRFPCPVCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLLLELEERALLREARLGRARSSGGMQSTPATEGLARSQAPSSAAFRCPFCKGKFRTAAERERHLHILHRPWKCGLCSFGSSQEEELLHHSLTAHGAPERPLAATSAAPQPQPPPQPEPRSVPESEPEPEREAVPAPAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASFDHACPVCGRCFKEPWFLKNHMKVHASKLGPLRAPGPGSGAARAPQPPDLGLLAYEPLGPALLLAPAPTPAERREPPSLLGYLSLRAGEARPNGEGAEPGAGRSFGSFRPLPSALPARARRHRAEEPEEEEEVVEAEEETWARSRALGPLASLHPRPGEGPGHSAPAAGTQARSTATQEENGLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGSLKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAQQSGAKPAPQTATWVEGAANPRPPTSAAPGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPELMALHLQVHHSRRARGRRPPQADASPPYAPAQSGETPPSPCPPQEGEEGPGLSRSGEAGLGGQER
SIO_010081: ZNF219
subclass of: SO_0000673
so part of: ZNF219
location: complement(join(969180..969787,970017..970148,970448..971855,972124..972129))
location: region:969180-972129:-1
so has part: feature:972124-972129:-1:exon
so has part: feature:970448-971855:-1:exon
so has part: feature:970017-970148:-1:exon
so has part: feature:969180-969787:-1:exon

XP_034504331.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:972124-972129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:970448-971855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:970017-970148:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:969180-969787:-1:exon

TMEM253
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: TMEM253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 979107..981365
location: region:979107-981365:1
so has part: feature:979107-981365:1:exon
subclass of: SO_0000010

100468122
type: Gene
SIO_000068: ncbigene

position:979107:1
position: 979107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981365:1
position: 981365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979107-981365:1:exon

TMEM253
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: TMEM253
product: transmembrane protein 253
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002927828.4
SIO_010081: TMEM253
subclass of: SO_0000673
so part of: TMEM253
location: join(979107..979187,979305..979448,979793..979903,979997..980053,980375..980485,980597..980743,981112..981365)
location: region:979107-981365:1
so has part: feature:979107-979187:1:exon
so has part: feature:979305-979448:1:exon
so has part: feature:979793-979903:1:exon
so has part: feature:979997-980053:1:exon
so has part: feature:980375-980485:1:exon
so has part: feature:980597-980743:1:exon
so has part: feature:981112-981365:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979107-979187:1:exon

position:979187:1
position: 979187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:979305-979448:1:exon

position:979305:1
position: 979305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979448:1
position: 979448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:979793-979903:1:exon

position:979793:1
position: 979793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979903:1
position: 979903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:979997-980053:1:exon

position:979997:1
position: 979997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980053:1
position: 980053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:980375-980485:1:exon

position:980375:1
position: 980375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980485:1
position: 980485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:980597-980743:1:exon

position:980597:1
position: 980597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980743:1
position: 980743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:981112-981365:1:exon

position:981112:1
position: 981112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMEM253
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: TMEM253
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 253
translation: MEERAAQREQERPSLRLEKLQHWARNRQSGRLLVLAVSQLWLAVAVVPFAVSVACLNSACHMATALPLGPGALGLLTGTVTLELRRAPRLWKVQATMILNIFSLILGFIVVAVEVMKTALGPAPAAPSQLAGLLVVELSTEAFTLGGVLVSAYSLFLLSWRKPGCCRSRSLHYQELQEGLSELEEVAALENGPTVASTANATND
SIO_010081: TMEM253
subclass of: SO_0000673
so part of: TMEM253
location: join(979341..979448,979793..979903,979997..980053,980375..980485,980597..980743,981112..981192)
location: region:979341-981192:1
so has part: feature:979341-979448:1:exon
so has part: feature:979793-979903:1:exon
so has part: feature:979997-980053:1:exon
so has part: feature:980375-980485:1:exon
so has part: feature:980597-980743:1:exon
so has part: feature:981112-981192:1:exon

XP_002927874.1
type: Protein
SIO_000068: ncbiprotein

position:979341:1
position: 979341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981192:1
position: 981192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979341-979448:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:979793-979903:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:979997-980053:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:980375-980485:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:980597-980743:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:981112-981192:1:exon

LOC100466117
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100466117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1016606..1017629)
location: region:1016606-1017629:-1
so has part: feature:1016606-1017629:-1:exon
subclass of: SO_0000010

100466117
type: Gene
SIO_000068: ncbigene

position:1016606:-1
position: 1016606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1017629:-1
position: 1017629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016606-1017629:-1:exon

LOC100466117
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100466117
product: olfactory receptor 5AU1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_002927820.4
SIO_010081: LOC100466117
subclass of: SO_0000673
so part of: LOC100466117
location: complement(1016606..1017629)
location: region:1016606-1017629:-1
so has part: feature:1016606-1017629:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1016606-1017629:-1:exon

LOC100466117
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100466117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: olfactory receptor 5AU1
translation: MEGANLSREIEFELVGLTSDPQLQKLLFTVFLGVYTITVLGNLVVFLLMHVSAALHTRMHSLLKKLSFLDFCCSSTVVPQTLVSFLAKRKVLSHFGCMAQMFFYVGFATSECYLVAATAYDRYAAICNPLLYPLTMSREICISLIVGSYGAGFLNSLIHTSCIFSLKFCGAHVVAHFFCDGPPILSLSCADTSLCEILLFIFAGFNLLSCTLAILVSYLFILISILTVNSAQGRFKAFSTCASHLTAVCLFYGTTLFMYLRPRSSYSLTQDRIVAVIYTVVIPMLNPLIYSLRNKDVKEALRKVWGRKTME
SIO_010081: LOC100466117
subclass of: SO_0000673
so part of: LOC100466117
location: complement(1016606..1017541)
location: region:1016606-1017541:-1
so has part: feature:1016606-1017541:-1:exon

XP_002927866.2
type: Protein
SIO_000068: ncbiprotein

position:1017541:-1
position: 1017541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016606-1017541:-1:exon

HNRNPC
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1041090..1098161)
location: region:1041090-1098161:-1
so has part: feature:1041090-1098161:-1:exon
subclass of: SO_0000010

100465698
type: Gene
SIO_000068: ncbigene

position:1041090:-1
position: 1041090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1098161:-1
position: 1098161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1041090-1098161:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_011235516.3
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1092639..1092664,1098007..1098161))
location: region:1041090-1098161:-1
so has part: feature:1098007-1098161:-1:exon
so has part: feature:1092639-1092664:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098161:-1:exon

position:1098007:-1
position: 1098007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1092639-1092664:-1:exon

position:1092639:-1
position: 1092639
reference: sequence
type: ReverseStrandPosition
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position:1092664:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:1064295-1064409:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:1064409:-1
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reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:1063643-1063690:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1042956-1043116:-1:exon

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reference: sequence
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position:1043116:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:1042359-1042472:-1:exon

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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:1041956-1042116:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:1041090-1041856:-1:exon

position:1041856:-1
position: 1041856
reference: sequence
type: ReverseStrandPosition
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HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_019808551.2
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1097321..1097366,1098007..1098160))
location: region:1041090-1098160:-1
so has part: feature:1098007-1098160:-1:exon
so has part: feature:1097321-1097366:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

position:1098160:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097321-1097366:-1:exon

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position: 1097321
reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_019808555.2
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042113,1042359..1042472,1042956..1043116,1063643..1063690,1064334..1064409,1070344..1070621,1092639..1092664,1097321..1097366,1098007..1098160))
location: region:1041090-1098160:-1
so has part: feature:1098007-1098160:-1:exon
so has part: feature:1097321-1097366:-1:exon
so has part: feature:1092639-1092664:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064334-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042113:-1:exon
so has part: feature:1041090-1041856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097321-1097366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092639-1092664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064334-1064409:-1:exon

position:1064334:-1
position: 1064334
reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041956-1042113:-1:exon

position:1042113:-1
position: 1042113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_019808554.2
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064334..1064409,1070344..1070621,1092639..1092664,1097321..1097366,1098007..1098160))
location: region:1041090-1098160:-1
so has part: feature:1098007-1098160:-1:exon
so has part: feature:1097321-1097366:-1:exon
so has part: feature:1092639-1092664:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064334-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097321-1097366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092639-1092664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064334-1064409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_019808553.2
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042113,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1092639..1092664,1097321..1097366,1098007..1098160))
location: region:1041090-1098160:-1
so has part: feature:1098007-1098160:-1:exon
so has part: feature:1097321-1097366:-1:exon
so has part: feature:1092639-1092664:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042113:-1:exon
so has part: feature:1041090-1041856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097321-1097366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092639-1092664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041956-1042113:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_002927819.4
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1092639..1092664,1097321..1097366,1098007..1098160))
location: region:1041090-1098160:-1
so has part: feature:1098007-1098160:-1:exon
so has part: feature:1097321-1097366:-1:exon
so has part: feature:1092639-1092664:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097321-1097366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092639-1092664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_034648622.1
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1092639..1092664,1092995..1093158,1097321..1097366,1098007..1098160))
location: region:1041090-1098160:-1
so has part: feature:1098007-1098160:-1:exon
so has part: feature:1097321-1097366:-1:exon
so has part: feature:1092995-1093158:-1:exon
so has part: feature:1092639-1092664:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098160:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1097321-1097366:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092995-1093158:-1:exon

position:1092995:-1
position: 1092995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093158:-1
position: 1093158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1092639-1092664:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 41 samples with support for all annotated introns
transcript id: XM_034648623.1
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1092639..1092664,1092995..1093158,1098007..1098158))
location: region:1041090-1098158:-1
so has part: feature:1098007-1098158:-1:exon
so has part: feature:1092995-1093158:-1:exon
so has part: feature:1092639-1092664:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

position:1098158:-1
position: 1098158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098158:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1092995-1093158:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1092639-1092664:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_011235519.3
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1098007..1098156))
location: region:1041090-1098156:-1
so has part: feature:1098007-1098156:-1:exon
so has part: feature:1070344-1070621:-1:exon
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so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

position:1098156:-1
position: 1098156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1098007-1098156:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 49 samples with support for all annotated introns
transcript id: XM_011235520.3
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1091927..1092572))
location: region:1041090-1092572:-1
so has part: feature:1091927-1092572:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

position:1092572:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1091927-1092572:-1:exon

position:1091927:-1
position: 1091927
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 4
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SIO_000300: 5
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SIO_000300: 6
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SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: HNRNPC
product: heterogeneous nuclear ribonucleoprotein C, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_011235521.3
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041090..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070621,1091920..1092572))
location: region:1041090-1092572:-1
so has part: feature:1091920-1092572:-1:exon
so has part: feature:1070344-1070621:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041090-1041856:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1091920-1092572:-1:exon

position:1091920:-1
position: 1091920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1070344-1070621:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1041090-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X4
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042113,1042359..1042472,1042956..1043116,1063643..1063690,1064334..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064334-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042113:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_019664114.1
type: Protein
SIO_000068: ncbiprotein

position:1041773:-1
position: 1041773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1070584:-1
position: 1070584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064334-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X3
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064334..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064334-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_019664113.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064334-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X2
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042113,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042113:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_019664112.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042113:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_019664110.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_034504513.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_034504514.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_002927865.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_011233818.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_011233821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_011233822.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

HNRNPC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: HNRNPC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1
translation: MASNVTNKTDPRSMNSRVFIGNLNTLVVKKSDVEAIFSKYGKIVGCSVHKGFAFVQYVNERNARAAVAGEDGRMIAGQVLDINLAAEPKVNRGKAGVKRSAAEMYGSVPEHPSPSPLLSSSFDLDYDFQRDYYDRMYSYPARVPPPPPIARAVVPSKRQRVSGNTSRRGKSGFNSKSGQRGSSSKSGKLKGDDLQTIKKELTQIKQKVDSLLESLEKIEKEQSKQGVEMKNDKSEEEQSSSSLKKDETNVKMESEGGADDSAEEGDLLDDDDNEDRGDDQLELIKDDEKEAEEGEDDRDSANGEDDS
SIO_010081: HNRNPC
subclass of: SO_0000673
so part of: HNRNPC
location: complement(join(1041773..1041856,1041956..1042116,1042359..1042472,1042956..1043116,1063643..1063690,1064295..1064409,1070344..1070584))
location: region:1041773-1070584:-1
so has part: feature:1070344-1070584:-1:exon
so has part: feature:1064295-1064409:-1:exon
so has part: feature:1063643-1063690:-1:exon
so has part: feature:1042956-1043116:-1:exon
so has part: feature:1042359-1042472:-1:exon
so has part: feature:1041956-1042116:-1:exon
so has part: feature:1041773-1041856:-1:exon

XP_011233823.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1070344-1070584:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1064295-1064409:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063643-1063690:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1042956-1043116:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1042359-1042472:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1041956-1042116:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1041773-1041856:-1:exon

LOC117797282
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC117797282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1107701..1148827
location: region:1107701-1148827:1
so has part: feature:1107701-1148827:1:exon
subclass of: SO_0000010

117797282
type: Gene
SIO_000068: ncbigene

position:1107701:1
position: 1107701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148827:1
position: 1148827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1107701-1148827:1:exon

LOC117797282
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC117797282
product: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_034648668.1
SIO_010081: LOC117797282
subclass of: SO_0000673
so part of: LOC117797282
location: join(1107701..1107753,1108231..1108358,1127244..1127363,1136561..1136693,1139273..1139538,1140678..1140768,1141296..1141409,1143965..1144070,1147185..1147208,1148073..1148219,1148750..1148827)
location: region:1107701-1148827:1
so has part: feature:1107701-1107753:1:exon
so has part: feature:1108231-1108358:1:exon
so has part: feature:1127244-1127363:1:exon
so has part: feature:1136561-1136693:1:exon
so has part: feature:1139273-1139538:1:exon
so has part: feature:1140678-1140768:1:exon
so has part: feature:1141296-1141409:1:exon
so has part: feature:1143965-1144070:1:exon
so has part: feature:1147185-1147208:1:exon
so has part: feature:1148073-1148219:1:exon
so has part: feature:1148750-1148827:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1107701-1107753:1:exon

position:1107753:1
position: 1107753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1108231-1108358:1:exon

position:1108231:1
position: 1108231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1108358:1
position: 1108358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1127244-1127363:1:exon

position:1127244:1
position: 1127244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1127363:1
position: 1127363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1136561-1136693:1:exon

position:1136561:1
position: 1136561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136693:1
position: 1136693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1139273-1139538:1:exon

position:1139273:1
position: 1139273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1139538:1
position: 1139538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1140678-1140768:1:exon

position:1140678:1
position: 1140678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1140768:1
position: 1140768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1141296-1141409:1:exon

position:1141296:1
position: 1141296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1141409:1
position: 1141409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1143965-1144070:1:exon

position:1143965:1
position: 1143965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1144070:1
position: 1144070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1147185-1147208:1:exon

position:1147185:1
position: 1147185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1147208:1
position: 1147208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1148073-1148219:1:exon

position:1148073:1
position: 1148073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1148219:1
position: 1148219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1148750-1148827:1:exon

position:1148750:1
position: 1148750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC117797282
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC117797282
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like
translation: MVPVSKGKNIKAQPPLSRMSREELEDNLFRLREEHMLVKELSWKQQDEIKRMRTALLRLRATGRDPRAEAAEADQPARRRRNVGWWQPPAKHQRPLMHGLQPQFQRVGPPAPRCWQPRIRAGHRQLRTAGAPSPEKPKRGPSDRLSYTAPPTFKDHVTNGKTRGETPSELNTMRVEDPPKSAEKMWSKDEDFEQRRSLECAQKATELRASIKENIELIRLKKLLHERNTSLVATKAQLTEVQEAYETLLQKNQGILSAAHDALLGQVNELRAELKEQSKKAVSLKSQLEDVSILQITLKEFQERVEDLEKERNLLNDNYDKLLEK
SIO_010081: LOC117797282
subclass of: SO_0000673
so part of: LOC117797282
location: join(1127345..1127363,1136561..1136693,1139273..1139538,1140678..1140768,1141296..1141409,1143965..1144070,1147185..1147208,1148073..1148219,1148750..1148827)
location: region:1127345-1148827:1
so has part: feature:1127345-1127363:1:exon
so has part: feature:1136561-1136693:1:exon
so has part: feature:1139273-1139538:1:exon
so has part: feature:1140678-1140768:1:exon
so has part: feature:1141296-1141409:1:exon
so has part: feature:1143965-1144070:1:exon
so has part: feature:1147185-1147208:1:exon
so has part: feature:1148073-1148219:1:exon
so has part: feature:1148750-1148827:1:exon

XP_034504559.1
type: Protein
SIO_000068: ncbiprotein

position:1127345:1
position: 1127345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127345-1127363:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1136561-1136693:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1139273-1139538:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1140678-1140768:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1141296-1141409:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1143965-1144070:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1147185-1147208:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1148073-1148219:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1148750-1148827:1:exon

LOC100467875
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100467875
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1157065..1203669
location: region:1157065-1203669:1
so has part: feature:1157065-1203669:1:exon
subclass of: SO_0000010

100467875
type: Gene
SIO_000068: ncbigene

position:1157065:1
position: 1157065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1203669:1
position: 1203669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157065-1203669:1:exon

LOC100467875
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: LOC100467875
product: RPGR interacting protein 1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_034648613.1
SIO_010081: LOC100467875
subclass of: SO_0000673
so part of: LOC100467875
location: join(1157065..1157337,1159369..1159529,1159960..1160103,1160565..1160715,1163188..1163640,1163802..1163953,1164407..1164749,1166178..1166359,1166636..1166839,1168816..1168954,1180194..1180291,1189189..1189381,1196224..1196308,1198285..1198415,1201306..1201668,1203332..1203669)
location: region:1157065-1203669:1
so has part: feature:1157065-1157337:1:exon
so has part: feature:1159369-1159529:1:exon
so has part: feature:1159960-1160103:1:exon
so has part: feature:1160565-1160715:1:exon
so has part: feature:1163188-1163640:1:exon
so has part: feature:1163802-1163953:1:exon
so has part: feature:1164407-1164749:1:exon
so has part: feature:1166178-1166359:1:exon
so has part: feature:1166636-1166839:1:exon
so has part: feature:1168816-1168954:1:exon
so has part: feature:1180194-1180291:1:exon
so has part: feature:1189189-1189381:1:exon
so has part: feature:1196224-1196308:1:exon
so has part: feature:1198285-1198415:1:exon
so has part: feature:1201306-1201668:1:exon
so has part: feature:1203332-1203669:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1157065-1157337:1:exon

position:1157337:1
position: 1157337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1159369-1159529:1:exon

position:1159369:1
position: 1159369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1159529:1
position: 1159529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1159960-1160103:1:exon

position:1159960:1
position: 1159960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160103:1
position: 1160103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1160565-1160715:1:exon

position:1160565:1
position: 1160565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1160715:1
position: 1160715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1163188-1163640:1:exon

position:1163188:1
position: 1163188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163640:1
position: 1163640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1163802-1163953:1:exon

position:1163802:1
position: 1163802
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1163953:1
position: 1163953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1164407-1164749:1:exon

position:1164407:1
position: 1164407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1164749:1
position: 1164749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1166178-1166359:1:exon

position:1166178:1
position: 1166178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166359:1
position: 1166359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1166636-1166839:1:exon

position:1166636:1
position: 1166636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1166839:1
position: 1166839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1168816-1168954:1:exon

position:1168816:1
position: 1168816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1168954:1
position: 1168954
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1180194-1180291:1:exon

position:1180194:1
position: 1180194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180291:1
position: 1180291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1189189-1189381:1:exon

position:1189189:1
position: 1189189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1189381:1
position: 1189381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1196224-1196308:1:exon

position:1196224:1
position: 1196224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1196308:1
position: 1196308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1198285-1198415:1:exon

position:1198285:1
position: 1198285
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1198415:1
position: 1198415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1201306-1201668:1:exon

position:1201306:1
position: 1201306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201668:1
position: 1201668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1203332-1203669:1:exon

position:1203332:1
position: 1203332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100467875
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: LOC100467875
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa GTPase regulator-interacting protein 1
translation: MLKLCNKDVTSHTFEYPTXSLLAPYLRPIFSMLDSSNQPHWNPQLGEQLQQQVSQLQDQLEAELQERRKVLLQLSREKAQNKDLQLEVTNLLQKHKQEVEILQKQETISQSPDRQSEPAAQPALFQETDPTEPCEPKNQEEKKLSQMLSELQVSHAETTLELEKTRDMLLLQRKINVCYQEELEAMMTKADNENKDHKEKLERLHQLLDLKNNRINQLEGILRSHGLPISEQLKDVAYGTRQLSLCLETLPTRGDEEEVDISLLHQSENLFELHIHQAFLTSAALAQAGDTEPTTFCTYAFYDFETHCTPLAVGPQPLYDFTSQYVVETDSLFLSYLHGASARFDLHQAVASEHHTLAAGWICFERVLETVEKVHGSTILTGAGGEDCGVLEYWMRLRFPIGPCLQAGNKRKKAQAYLSASVFGACEAQEDQSRSETWKHQNELRVEIIRCYGLQSRRLGTQPSPYVMYRFFTFSDHDTAIIPASNNPYFRDQARFPVLVTSDLDKYLRREALSVYVFDDEDSEPGSYLGRVQVPLLPLAQNKSIKGDFNLTDPAGNPNGFVEAQLDWKSFYLPPESFLKPEAQPEEDTKDGLELSSEEEKASFSPQDQMAFAEIPIEAGQYQAKRKPPQVGERKEREHQVASYSRRKHGKRTGVQGKNRMEYLSRNILTGNTLQQVNYTEWKFSGLKSSIDDGLKNQQKEEEMTSSHSAVMEKEALNPVNDKESCEQASEVSEAPTTDSDDIVTPASLKCPKAGSEKMCIEIISLAFYPEAGVMCDESVKQVYVEYKFYDLPLSETETPVSLRKPQAGEEIHFHFSKVIDLDPLEQKGRRQFLFAMLNRQDPEQGRLKFTVVSDPMDDEKKECQEVGYAFLELWQNMESGKDGVEQGLDIVSSEDQATKIGRLKVSLRAAAALHAIYKEMTEERFS
SIO_010081: LOC100467875
subclass of: SO_0000673
so part of: LOC100467875
location: join(1157104..1157337,1159369..1159529,1159960..1160103,1160565..1160715,1163188..1163640,1163802..1163953,1164407..1164749,1166178..1166359,1166636..1166839,1168816..1168954,1180194..1180291,1189189..1189381,1196224..1196308,1198285..1198415,1201306..1201418)
location: region:1157104-1201418:1
so has part: feature:1157104-1157337:1:exon
so has part: feature:1159369-1159529:1:exon
so has part: feature:1159960-1160103:1:exon
so has part: feature:1160565-1160715:1:exon
so has part: feature:1163188-1163640:1:exon
so has part: feature:1163802-1163953:1:exon
so has part: feature:1164407-1164749:1:exon
so has part: feature:1166178-1166359:1:exon
so has part: feature:1166636-1166839:1:exon
so has part: feature:1168816-1168954:1:exon
so has part: feature:1180194-1180291:1:exon
so has part: feature:1189189-1189381:1:exon
so has part: feature:1196224-1196308:1:exon
so has part: feature:1198285-1198415:1:exon
so has part: feature:1201306-1201418:1:exon

XP_034504504.1
type: Protein
SIO_000068: ncbiprotein

position:1157104:1
position: 1157104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1201418:1
position: 1201418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1157104-1157337:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1159369-1159529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1159960-1160103:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1160565-1160715:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1163188-1163640:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1163802-1163953:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1164407-1164749:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1166178-1166359:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1166636-1166839:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1168816-1168954:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1180194-1180291:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1189189-1189381:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1196224-1196308:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1198285-1198415:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1201306-1201418:1:exon

LOC100465446
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC100465446
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1167628..1168008)
location: region:1167628-1168008:-1
so has part: feature:1167628-1168008:-1:exon

100465446
type: Gene
SIO_000068: ncbigene

position:1167628:-1
position: 1167628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1168008:-1
position: 1168008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1167628-1168008:-1:exon

LOC100465446
type: Exon
subclass of: SO_0000147
RO_0002162: 9646
gene: LOC100465446
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100465446
subclass of: SO_0000673
so part of: LOC100465446
location: complement(1167628..1168008)
location: region:1167628-1168008:-1
so has part: feature:1167628-1168008:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1167628-1168008:-1:exon

SUPT16H
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: SUPT16H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1202797..1238708)
location: region:1202797-1238708:-1
so has part: feature:1202797-1238708:-1:exon
subclass of: SO_0000010

100465194
type: Gene
SIO_000068: ncbigene

position:1202797:-1
position: 1202797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238708:-1
position: 1238708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1202797-1238708:-1:exon

SUPT16H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: SUPT16H
product: SPT16 homolog, facilitates chromatin remodeling subunit
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 46 samples with support for all annotated introns
transcript id: XM_002927817.4
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(1202797..1203014,1203676..1203753,1203884..1204013,1204651..1204780,1210429..1210598,1211209..1211284,1211795..1211907,1212235..1212360,1212861..1212979,1213212..1213338,1213441..1213576,1214085..1214212,1214681..1214834,1214922..1215037,1215147..1215242,1215358..1215423,1216352..1216464,1216599..1216672,1218229..1218319,1219793..1219965,1220795..1220946,1221590..1221736,1222287..1222439,1223468..1223638,1224905..1224997,1238525..1238708))
location: region:1202797-1238708:-1
so has part: feature:1238525-1238708:-1:exon
so has part: feature:1224905-1224997:-1:exon
so has part: feature:1223468-1223638:-1:exon
so has part: feature:1222287-1222439:-1:exon
so has part: feature:1221590-1221736:-1:exon
so has part: feature:1220795-1220946:-1:exon
so has part: feature:1219793-1219965:-1:exon
so has part: feature:1218229-1218319:-1:exon
so has part: feature:1216599-1216672:-1:exon
so has part: feature:1216352-1216464:-1:exon
so has part: feature:1215358-1215423:-1:exon
so has part: feature:1215147-1215242:-1:exon
so has part: feature:1214922-1215037:-1:exon
so has part: feature:1214681-1214834:-1:exon
so has part: feature:1214085-1214212:-1:exon
so has part: feature:1213441-1213576:-1:exon
so has part: feature:1213212-1213338:-1:exon
so has part: feature:1212861-1212979:-1:exon
so has part: feature:1212235-1212360:-1:exon
so has part: feature:1211795-1211907:-1:exon
so has part: feature:1211209-1211284:-1:exon
so has part: feature:1210429-1210598:-1:exon
so has part: feature:1204651-1204780:-1:exon
so has part: feature:1203884-1204013:-1:exon
so has part: feature:1203676-1203753:-1:exon
so has part: feature:1202797-1203014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238525-1238708:-1:exon

position:1238525:-1
position: 1238525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1224905-1224997:-1:exon

position:1224905:-1
position: 1224905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1224997:-1
position: 1224997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1223468-1223638:-1:exon

position:1223468:-1
position: 1223468
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1223638:-1
position: 1223638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1222287-1222439:-1:exon

position:1222287:-1
position: 1222287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222439:-1
position: 1222439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1221590-1221736:-1:exon

position:1221590:-1
position: 1221590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221736:-1
position: 1221736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1220795-1220946:-1:exon

position:1220795:-1
position: 1220795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220946:-1
position: 1220946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1219793-1219965:-1:exon

position:1219793:-1
position: 1219793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1219965:-1
position: 1219965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1218229-1218319:-1:exon

position:1218229:-1
position: 1218229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1218319:-1
position: 1218319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1216599-1216672:-1:exon

position:1216599:-1
position: 1216599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216672:-1
position: 1216672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1216352-1216464:-1:exon

position:1216352:-1
position: 1216352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1216464:-1
position: 1216464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1215358-1215423:-1:exon

position:1215358:-1
position: 1215358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215423:-1
position: 1215423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1215147-1215242:-1:exon

position:1215147:-1
position: 1215147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215242:-1
position: 1215242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1214922-1215037:-1:exon

position:1214922:-1
position: 1214922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1215037:-1
position: 1215037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1214681-1214834:-1:exon

position:1214681:-1
position: 1214681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214834:-1
position: 1214834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1214085-1214212:-1:exon

position:1214085:-1
position: 1214085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1214212:-1
position: 1214212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1213441-1213576:-1:exon

position:1213441:-1
position: 1213441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213576:-1
position: 1213576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1213212-1213338:-1:exon

position:1213212:-1
position: 1213212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1213338:-1
position: 1213338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1212861-1212979:-1:exon

position:1212861:-1
position: 1212861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212979:-1
position: 1212979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1212235-1212360:-1:exon

position:1212235:-1
position: 1212235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212360:-1
position: 1212360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1211795-1211907:-1:exon

position:1211795:-1
position: 1211795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211907:-1
position: 1211907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1211209-1211284:-1:exon

position:1211209:-1
position: 1211209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1211284:-1
position: 1211284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1210429-1210598:-1:exon

position:1210429:-1
position: 1210429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210598:-1
position: 1210598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1204651-1204780:-1:exon

position:1204651:-1
position: 1204651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204780:-1
position: 1204780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1203884-1204013:-1:exon

position:1203884:-1
position: 1203884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1204013:-1
position: 1204013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1203676-1203753:-1:exon

position:1203676:-1
position: 1203676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203753:-1
position: 1203753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1202797-1203014:-1:exon

position:1203014:-1
position: 1203014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SUPT16H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9646
gene: SUPT16H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: FACT complex subunit SPT16
translation: MAVTLDKDAYYRRVKRLYSNWRKGEDEYASVDAIVVSVGVDEEIVYAKSTALQTWLFGYELTDTIMVFCDDKIIFMASKKKVEFLKQIANTKGNENANGAPAITLLIREKNESNKSSFDKMIEAIKESKNGKKIGVFSKDKFPGEFMKNWNDCLNKEGFDKIDISAVVAYTIAVKEDGELNLMKKAASITSEVFNKFFKERVMEIVDADEKVRHSKLAESVEKAIEEKKYLAGADPSTVEMCYPPIIQSGGNYNLKFSVVSDKNHMHFGAITCAMGIRFKSYCSNLVRTLMVDPSQEVQENYNFLLQLQEELLKELRHGVKICDVYNAVMDVVKKQKPELLNKITKNLGFGMGIEFREGSLVINSKNQYKLKKGMVFSINLGFSDLTNKEGKKPEEKTYALFIGDTVLVDEDGPATVLTSVKKKVKNVGIFLKNEDEEEEEEEKDEAEDLLGRGSRAALLTERTRNEMTAEEKRRAHQKELAAQLNEEAKRRLTEQKGEQQIQKARKSNVSYKNPSLMPKEPHIREMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFYCPGSALGRNEGNIFPNPEATFVKEITYRASNMKAPGEQTVPALNLQNAFRIIKEVQKRYKTREAEEKEKEGIVKQDSLVINLNRSNPKLKDLYIRPNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDVQFYTEVGEITTDLGKHQHMHDRDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKEELEFEVPFRDLGFNGAPYRSTCLLQPTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWLNSCDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLEPEGEGSDAEEGDSESEIEDETFNPSEDDYEEEEEDSDEDYSSEAEESDYSKESLGSEEESGKDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKKRK
SIO_010081: SUPT16H
subclass of: SO_0000673
so part of: SUPT16H
location: complement(join(1202869..1203014,1203676..1203753,1203884..1204013,1204651..1204780,1210429..1210598,1211209..1211284,1211795..1211907,1212235..1212360,1212861..1212979,1213212..1213338,1213441..1213576,1214085..1214212,1214681..1214834,1214922..1215037,1215147..1215242,1215358..1215423,1216352..1216464,1216599..1216672,1218229..1218319,1219793..1219965,1220795..1220946,1221590..1221736,1222287..1222439,1223468..1223638,1224905..1224997,1238525..1238590))
location: region:1202869-1238590:-1
so has part: feature:1238525-1238590:-1:exon
so has part: feature:1224905-1224997:-1:exon
so has part: feature:1223468-1223638:-1:exon
so has part: feature:1222287-1222439:-1:exon
so has part: feature:1221590-1221736:-1:exon
so has part: feature:1220795-1220946:-1:exon
so has part: feature:1219793-1219965:-1:exon
so has part: feature:1218229-1218319:-1:exon
so has part: feature:1216599-1216672:-1:exon
so has part: feature:1216352-1216464:-1:exon
so has part: feature:1215358-1215423:-1:exon
so has part: feature:1215147-1215242:-1:exon
so has part: feature:1214922-1215037:-1:exon
so has part: feature:1214681-1214834:-1:exon
so has part: feature:1214085-1214212:-1:exon
so has part: feature:1213441-1213576:-1:exon
so has part: feature:1213212-1213338:-1:exon
so has part: feature:1212861-1212979:-1:exon
so has part: feature:1212235-1212360:-1:exon
so has part: feature:1211795-1211907:-1:exon
so has part: feature:1211209-1211284:-1:exon
so has part: feature:1210429-1210598:-1:exon
so has part: feature:1204651-1204780:-1:exon
so has part: feature:1203884-1204013:-1:exon
so has part: feature:1203676-1203753:-1:exon
so has part: feature:1202869-1203014:-1:exon

XP_002927863.1
type: Protein
SIO_000068: ncbiprotein

position:1202869:-1
position: 1202869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1238590:-1
position: 1238590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238525-1238590:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1224905-1224997:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1223468-1223638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1222287-1222439:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1221590-1221736:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1220795-1220946:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1219793-1219965:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1218229-1218319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1216599-1216672:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1216352-1216464:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1215358-1215423:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1215147-1215242:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1214922-1215037:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1214681-1214834:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1214085-1214212:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1213441-1213576:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1213212-1213338:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1212861-1212979:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1212235-1212360:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1211795-1211907:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1211209-1211284:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1210429-1210598:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1204651-1204780:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1203884-1204013:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1203676-1203753:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1202869-1203014:-1:exon

LOC105241380
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: LOC105241380
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1238788..1244015
location: region:1238788-1244015:1
so has part: feature:1238788-1244015:1:exon
subclass of: SO_0000011

105241380
type: Gene
SIO_000068: ncbigene

position:1238788:1
position: 1238788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1244015:1
position: 1244015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1238788-1244015:1:exon

LOC105241380
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9646
nc RNA class: lncRNA
gene: LOC105241380
product: uncharacterized LOC105241380
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_860426.3
SIO_010081: LOC105241380
subclass of: SO_0000673
so part of: LOC105241380
location: join(1238788..1239128,1243231..1243325,1243879..1244015)
location: region:1238788-1244015:1
so has part: feature:1238788-1239128:1:exon
so has part: feature:1243231-1243325:1:exon
so has part: feature:1243879-1244015:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1238788-1239128:1:exon

position:1239128:1
position: 1239128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1243231-1243325:1:exon

position:1243231:1
position: 1243231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1243325:1
position: 1243325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1243879-1244015:1:exon

position:1243879:1
position: 1243879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CHD8
type: Gene
subclass of: SO_0000704
RO_0002162: 9646
gene: CHD8
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1239780..1298611)
location: region:1239780-1298611:-1
so has part: feature:1239780-1298611:-1:exon
subclass of: SO_0000010

100464946
type: Gene
SIO_000068: ncbigene

position:1239780:-1
position: 1239780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1298611:-1
position: 1298611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1239780-1298611:-1:exon

CHD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CHD8
product: chromodomain helicase DNA binding protein 8, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_011235512.3
SIO_010081: CHD8
subclass of: SO_0000673
so part of: CHD8
location: complement(join(1239780..1240761,1243419..1243535,1244297..1244410,1245474..1245776,1246070..1246221,1246445..1247164,1247256..1247464,1247919..1248126,1248305..1248359,1248826..1248901,1250073..1250202,1251536..1251639,1251925..1252014,1252105..1252285,1252366..1252565,1252764..1252960,1253311..1253421,1253573..1253752,1253938..1254105,1254604..1254799,1255051..1255261,1256298..1256553,1256777..1256920,1257924..1258100,1259175..1259418,1259564..1259685,1261136..1261273,1263848..1263931,1266861..1266978,1267493..1267548,1267911..1267979,1268060..1268242,1273738..1273852,1275202..1275587,1276297..1276668,1277540..1278597,1298498..1298611))
location: region:1239780-1298611:-1
so has part: feature:1298498-1298611:-1:exon
so has part: feature:1277540-1278597:-1:exon
so has part: feature:1276297-1276668:-1:exon
so has part: feature:1275202-1275587:-1:exon
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so has part: feature:1256298-1256553:-1:exon
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so has part: feature:1251925-1252014:-1:exon
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so has part: feature:1239780-1240761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298498-1298611:-1:exon

position:1298498:-1
position: 1298498
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 2
SIO_000628: feature:1277540-1278597:-1:exon

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position: 1277540
reference: sequence
type: ReverseStrandPosition
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position:1278597:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:1276297-1276668:-1:exon

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position: 1276297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:1275202-1275587:-1:exon

position:1275202:-1
position: 1275202
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:1273738-1273852:-1:exon

position:1273738:-1
position: 1273738
reference: sequence
type: ReverseStrandPosition
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 6
SIO_000628: feature:1268060-1268242:-1:exon

position:1268060:-1
position: 1268060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1268242:-1
position: 1268242
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:1267911-1267979:-1:exon

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position: 1267911
reference: sequence
type: ReverseStrandPosition
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position:1267979:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:1267493-1267548:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:1266861-1266978:-1:exon

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position: 1266861
reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 10
SIO_000628: feature:1263848-1263931:-1:exon

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position: 1263848
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:1261136-1261273:-1:exon

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position: 1261136
reference: sequence
type: ReverseStrandPosition
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position:1261273:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:1259564-1259685:-1:exon

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position: 1259564
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:1259175-1259418:-1:exon

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position: 1259175
reference: sequence
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position:1259418:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:1257924-1258100:-1:exon

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position: 1257924
reference: sequence
type: ReverseStrandPosition
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position:1258100:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:1256777-1256920:-1:exon

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position: 1256777
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 16
SIO_000628: feature:1256298-1256553:-1:exon

position:1256298:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1256553:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:1255051-1255261:-1:exon

position:1255051:-1
position: 1255051
reference: sequence
type: ReverseStrandPosition
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position:1255261:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1254604-1254799:-1:exon

position:1254604:-1
position: 1254604
reference: sequence
type: ReverseStrandPosition
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position:1254799:-1
position: 1254799
reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:1253938-1254105:-1:exon

position:1253938:-1
position: 1253938
reference: sequence
type: ReverseStrandPosition
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position:1254105:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:1253573-1253752:-1:exon

position:1253573:-1
position: 1253573
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position:1253752:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:1253311-1253421:-1:exon

position:1253311:-1
position: 1253311
reference: sequence
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position:1253421:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:1252764-1252960:-1:exon

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urn:…
SIO_000300: 23
SIO_000628: feature:1252366-1252565:-1:exon

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urn:…
SIO_000300: 24
SIO_000628: feature:1252105-1252285:-1:exon

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reference: sequence
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position:1252285:-1
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urn:…
SIO_000300: 25
SIO_000628: feature:1251925-1252014:-1:exon

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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:1251536-1251639:-1:exon

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urn:…
SIO_000300: 27
SIO_000628: feature:1250073-1250202:-1:exon

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urn:…
SIO_000300: 28
SIO_000628: feature:1248826-1248901:-1:exon

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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:1248305-1248359:-1:exon

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urn:…
SIO_000300: 30
SIO_000628: feature:1247919-1248126:-1:exon

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urn:…
SIO_000300: 31
SIO_000628: feature:1247256-1247464:-1:exon

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urn:…
SIO_000300: 32
SIO_000628: feature:1246445-1247164:-1:exon

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urn:…
SIO_000300: 33
SIO_000628: feature:1246070-1246221:-1:exon

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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:1245474-1245776:-1:exon

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reference: sequence
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urn:…
SIO_000300: 35
SIO_000628: feature:1244297-1244410:-1:exon

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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:1243419-1243535:-1:exon

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position: 1243419
reference: sequence
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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:1239780-1240761:-1:exon

position:1240761:-1
position: 1240761
reference: sequence
type: ReverseStrandPosition
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CHD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CHD8
product: chromodomain helicase DNA binding protein 8, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_011235510.3
SIO_010081: CHD8
subclass of: SO_0000673
so part of: CHD8
location: complement(join(1239780..1240761,1243419..1243535,1243932..1244111,1244297..1244410,1245474..1245776,1246070..1246221,1246445..1247164,1247256..1247464,1247919..1248126,1248305..1248359,1248826..1248901,1250073..1250202,1251536..1251639,1251925..1252014,1252105..1252285,1252366..1252565,1252764..1252960,1253311..1253421,1253573..1253752,1253938..1254105,1254604..1254799,1255051..1255261,1256298..1256553,1256777..1256920,1257924..1258100,1259175..1259418,1259564..1259685,1261136..1261273,1263848..1263931,1266861..1266978,1267493..1267548,1267911..1267979,1268060..1268242,1273738..1273852,1275202..1275587,1276297..1276668,1277540..1278597,1298498..1298611))
location: region:1239780-1298611:-1
so has part: feature:1298498-1298611:-1:exon
so has part: feature:1277540-1278597:-1:exon
so has part: feature:1276297-1276668:-1:exon
so has part: feature:1275202-1275587:-1:exon
so has part: feature:1273738-1273852:-1:exon
so has part: feature:1268060-1268242:-1:exon
so has part: feature:1267911-1267979:-1:exon
so has part: feature:1267493-1267548:-1:exon
so has part: feature:1266861-1266978:-1:exon
so has part: feature:1263848-1263931:-1:exon
so has part: feature:1261136-1261273:-1:exon
so has part: feature:1259564-1259685:-1:exon
so has part: feature:1259175-1259418:-1:exon
so has part: feature:1257924-1258100:-1:exon
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so has part: feature:1256298-1256553:-1:exon
so has part: feature:1255051-1255261:-1:exon
so has part: feature:1254604-1254799:-1:exon
so has part: feature:1253938-1254105:-1:exon
so has part: feature:1253573-1253752:-1:exon
so has part: feature:1253311-1253421:-1:exon
so has part: feature:1252764-1252960:-1:exon
so has part: feature:1252366-1252565:-1:exon
so has part: feature:1252105-1252285:-1:exon
so has part: feature:1251925-1252014:-1:exon
so has part: feature:1251536-1251639:-1:exon
so has part: feature:1250073-1250202:-1:exon
so has part: feature:1248826-1248901:-1:exon
so has part: feature:1248305-1248359:-1:exon
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so has part: feature:1247256-1247464:-1:exon
so has part: feature:1246445-1247164:-1:exon
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so has part: feature:1245474-1245776:-1:exon
so has part: feature:1244297-1244410:-1:exon
so has part: feature:1243932-1244111:-1:exon
so has part: feature:1243419-1243535:-1:exon
so has part: feature:1239780-1240761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1298498-1298611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1277540-1278597:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1276297-1276668:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1275202-1275587:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1273738-1273852:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1268060-1268242:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1267911-1267979:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1267493-1267548:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1266861-1266978:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1263848-1263931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1261136-1261273:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1259564-1259685:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1259175-1259418:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1257924-1258100:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1256777-1256920:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1256298-1256553:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1255051-1255261:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1254604-1254799:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1253938-1254105:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1253573-1253752:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1253311-1253421:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1252764-1252960:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1252366-1252565:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1252105-1252285:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1251925-1252014:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1251536-1251639:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1250073-1250202:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1248826-1248901:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1248305-1248359:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1247919-1248126:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1247256-1247464:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1246445-1247164:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1246070-1246221:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1245474-1245776:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1244297-1244410:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1243932-1244111:-1:exon

position:1243932:-1
position: 1243932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1244111:-1
position: 1244111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1243419-1243535:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1239780-1240761:-1:exon

CHD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CHD8
product: chromodomain helicase DNA binding protein 8, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_011235514.3
SIO_010081: CHD8
subclass of: SO_0000673
so part of: CHD8
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CHD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CHD8
product: chromodomain helicase DNA binding protein 8, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_034648611.1
SIO_010081: CHD8
subclass of: SO_0000673
so part of: CHD8
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CHD8
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9646
gene: CHD8
product: chromodomain helicase DNA binding protein 8, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_034648609.1
SIO_010081: CHD8
subclass of: SO_0000673
so part of: CHD8
location: complement(join(1239780..1240761,1243419..1243535,1243932..1244111,1244297..1244410,1245474..1245776,1246070..1246221,1246445..1247164,1247256..1247464,1247919..1248126,1248305..1248359,1248826..1248901,1250073..1250202,1251536..1251639,1251925..1252014,1252105..1252285,1252366..1252565,1252764..1252960,1253311..1253421,1253573..1253752,1253938..1254105,1254604..1254799,1255051..1255261,1256298..1256553,1256777..1256920,1257924..1258100,1259175..1259418,1259564..1259685,1261136..1261273,1263848..1263931,1266861..1266978,1267493..1267548,1267911..1267979,1268060..1268242,1273738..1273852,1275202..1275587,1276297..1276668,1277540..1278597,1283964..1284064))
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