Herbaspirillum seropedicae strain AU13965 plasmid unnamed, complete sequence.
type: Entry
definition: Herbaspirillum seropedicae strain AU13965 plasmid unnamed, complete sequence.
sequence version: NZ_CP034394.1
sequence date: 2023-03-25
sequence: sequence
division: CON
label: NZ_CP034394.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA224116
dblink: SAMN10532542
keyword: RefSeq
source: Herbaspirillum seropedicae
organism: Herbaspirillum seropedicae
taxonomy: Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.
reference: 1
reference: 2
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCP034394.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 2017\nAssembly Method :: SPAdes v. 3.10.0; MIRA v. 4.0.2; CLC NGS\n Cell v. 9\nAssembly Name :: UFPR_HseroL2_1.1\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 160.0x\nSequencing Technology :: IonTorrent; Illumina MiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/25/2023 00:53:34\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 4,818\nCDSs (total) :: 4,748\nGenes (coding) :: 4,719\nCDSs (with protein) :: 4,719\nGenes (RNA) :: 70\nrRNAs :: 3, 3, 3 (5S, 16S, 23S)\ncomplete rRNAs :: 3, 3, 3 (5S, 16S, 23S)\ntRNAs :: 57\nncRNAs :: 4\nPseudo Genes (total) :: 29\nCDSs (without protein) :: 29\nPseudo Genes (ambiguous residues) :: 0 of 29\nPseudo Genes (frameshifted) :: 6 of 29\nPseudo Genes (incomplete) :: 23 of 29\nPseudo Genes (internal stop) :: 2 of 29\nPseudo Genes (multiple problems) :: 2 of 29\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000155
sequence length: 42977
topology: circular
so has quality: SO_0000988
location: 1..42977
location: region:1-42977:1
RO_0002162: 964

NZ_CP034394
type: RefSeq
SIO_000068: refseq

PRJNA224116
type: BioProject
SIO_000068: bioproject

SAMN10532542
type: BioSample
SIO_000068: biosample

1
title: Genome comparison between clinical and environmental strains of Herbaspirillum seropedicae reveals adaptions to survive in human hosts
author: Faoro, H.
author: Oliveira, W.K.
author: Weiss, V.A.
author: Tadra-Sfeir, M.Z.
author: Cardoso, R.L.
author: Balsanelli, E.
author: Tuleski, T.R.
author: Brusamarello-Santos, L.C.C.
author: Camilos-Neto, D.
author: Cruz, L.M.
author: Raitz, R.
author: Marques, A.C.Q.
author: LiPuma, J.
author: Fadel-Picheth, C.M.T.
author: Souza, E.M.
author: Pedrosa, F.O.
journal: Unpublished

2
title: Direct Submission
author: Faoro, H.
author: Oliveira, W.K.
author: Weiss, V.A.
author: Tadra-Sfeir, M.Z.
author: Cardoso, R.L.
author: Balsanelli, E.
author: Tuleski, T.R.
author: Brusamarello-Santos, L.C.C.
author: Camilos-Neto, D.
author: Cruz, L.M.
author: Raitz, R.
author: Marques, A.C.Q.
author: LiPuma, J.
author: Fadel-Picheth, C.M.T.
author: Souza, E.M.
author: Pedrosa, F.O.
journal: Submitted (07-DEC-2018) Bioinformatics Department, UFPR - Universidade Federal do Parana, R. Dr. Alcides Vieira Arcoverde, 1225 - Jardim das Americas, Curitiba, Parana 81520260, Brazil

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42977:1
position: 42977
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42977:1:source
so part of: sequence
organism: Herbaspirillum seropedicae
mol type: genomic DNA
strain: AU13965
isolation source: sputum
host: Homo sapiens
plasmid: unnamed
country: USA:Ann Arbor, MI
lat lon: 42.284361 N 83.727866 W
collection date: 2008
collected by: Division of Infectious Diseases, Department of Pediatrics and Communicable Diseases, University of Michigan Medical School, Ann Arbor, MI

964
type: Taxonomy
SIO_000068: taxonomy

EJD96_RS00005
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00005
old locus tag: EJD96_00005
so part of: sequence
location: complement(158..733)
location: region:158-733:-1
so has part: feature:158-733:-1:exon
subclass of: SO_0000010

position:158:-1
position: 158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733:-1
position: 733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:158-733:-1:exon

EJD96_RS00005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00005
old locus tag: EJD96_00005
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: 3TM-type holin
translation: MLPIAMALAEFAPLIAGWLGGSNAEKVATKVVDIAKTVTGQSSPDAAVAALQADPQLAYQYQKAVLDQQADLARLAQQVQLAELAADQANTAAVNETMRAEAAADHWPTYSWRPFIGFCFGCMGLVSGGTVAIAYLGVMFFRVDPVVLGHLPGLIGAEAGVMATMAPVLGIASYFRGKMQASPVVASDNRG
SIO_010081: EJD96_RS00005
subclass of: SO_0000673
so part of: EJD96_RS00005
location: complement(158..733)
location: region:158-733:-1
so has part: feature:158-733:-1:exon

WP_139969247.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:158-733:-1:exon

EJD96_RS00010
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00010
old locus tag: EJD96_00010
so part of: sequence
location: complement(735..1217)
location: region:735-1217:-1
so has part: feature:735-1217:-1:exon
subclass of: SO_0000010

position:735:-1
position: 735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217:-1
position: 1217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:735-1217:-1:exon

EJD96_RS00010
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00010
old locus tag: EJD96_00010
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013092495.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: glycosyl hydrolase 108 family protein
translation: MSSFDDAFDALIGNEGGYSNNPKDPGGETMWGVTARVARAEGYTGPMKDLPRDTAKAIAKKLYWNPLKLDQFDPRVAFQIFDANYNGGHPIIWMQGASGAKVDGLLGPATIAAVAATDPLKFMMRWNSLRLRYFTSLKTWPTFGKGWANRIADNLKLGAI
SIO_010081: EJD96_RS00010
subclass of: SO_0000673
so part of: EJD96_RS00010
location: complement(735..1217)
location: region:735-1217:-1
so has part: feature:735-1217:-1:exon

WP_139969248.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:735-1217:-1:exon

EJD96_RS00015
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00015
old locus tag: EJD96_00015
so part of: sequence
location: complement(1214..1540)
location: region:1214-1540:-1
so has part: feature:1214-1540:-1:exon
subclass of: SO_0000010

position:1214:-1
position: 1214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540:-1
position: 1540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1214-1540:-1:exon

EJD96_RS00015
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00015
old locus tag: EJD96_00015
inference: COORDINATES: similar to AA sequence:RefSeq:WP_005875714.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage holin family protein
translation: MTPDKSPETFGWITYAWVIGLSALGGFVSFMRKVKDGHARAWNFVELIGEVCTSAFAGVMTFYLCEWSNFAPLLTAAMVGVAGHMGSRSIMLLERMMESKFPQGGEKL
SIO_010081: EJD96_RS00015
subclass of: SO_0000673
so part of: EJD96_RS00015
location: complement(1214..1540)
location: region:1214-1540:-1
so has part: feature:1214-1540:-1:exon

WP_139969249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1214-1540:-1:exon

EJD96_RS00020
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00020
old locus tag: EJD96_00020
so part of: sequence
location: complement(1609..1974)
location: region:1609-1974:-1
so has part: feature:1609-1974:-1:exon
subclass of: SO_0000010

position:1609:-1
position: 1609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1974:-1
position: 1974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1609-1974:-1:exon

EJD96_RS00020
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00020
old locus tag: EJD96_00020
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGYYINAEIGYYEGDQVSHLDEVVPQRLNPGDVWDGTAWQSAPEPVPASVTQSQARRALLAAGKLAAVETAVAAADQDTQIVWQYAATVERGSPFVAALAAAVGLTDAQIDDLFRRAATFV
SIO_010081: EJD96_RS00020
subclass of: SO_0000673
so part of: EJD96_RS00020
location: complement(1609..1974)
location: region:1609-1974:-1
so has part: feature:1609-1974:-1:exon

WP_139969250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1609-1974:-1:exon

EJD96_RS00025
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00025
old locus tag: EJD96_00025
so part of: sequence
location: complement(1974..4034)
location: region:1974-4034:-1
so has part: feature:1974-4034:-1:exon
subclass of: SO_0000010

position:4034:-1
position: 4034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1974-4034:-1:exon

EJD96_RS00025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00025
old locus tag: EJD96_00025
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: LamG domain-containing protein
translation: MSQGSLILPTTGTLSGLALVTAINTALAAISSKTSGATDPATLTGGVQPFSYWADTSVTPSVLRMRNAANTGWILIGDLTQPAWGLATIAATQQGAYSSAVAGGTANALTATIATTLTSLTNGQPFTLTAQTSSTSPSVTLALTLGSTTLPAYPVVKGANSPLVPNDIPGAGYPMLLTWSQAFGAYVLQNPANGIIPQGTTSPAVRQTVLQGVTNALGYAAMLAAGSGLALNLSATAMPMRTAFAQGAADFIATLSADTTGVVSALPANNLSYITQDYVSPTSVTWGKTLAPPQYGYSYNQSAQALLHFDGTAGSTSFIDDFGNTWTAQGGAKLQSNQSKFGGTALGGAGTNNALNGSTDFARTTSISNLGADSWTMRGWFYFTSFGSQSRALLGATNANGYGVHLFALTTGKLNWQLSSTGNSLDIASSSGSTTMALNAWNFVEIGYDKVAGQYFVNLNGARELTQASAARICAITEIRVGGANNAGSSLGFDGYIDEFEFLPYCDHPGGTTYSVPGSAPSITAAGYASDFFNIPNMTMYGISGASTAAGANPTFTAKNRVYVGECITGGSSVSSVVNYALNARYLSSTVSPVAFSSLGAYTFSHNIGIPVELVNTTGYARRTSADSWFENTLAASSNTNNPPWPATTGITRNAALVNTGGSGLYIGAGLLAGAGQLLLSAKRAF
SIO_010081: EJD96_RS00025
subclass of: SO_0000673
so part of: EJD96_RS00025
location: complement(1974..4034)
location: region:1974-4034:-1
so has part: feature:1974-4034:-1:exon

WP_139969251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1974-4034:-1:exon

EJD96_RS00030
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00030
old locus tag: EJD96_00030
so part of: sequence
location: complement(4036..7038)
location: region:4036-7038:-1
so has part: feature:4036-7038:-1:exon
subclass of: SO_0000010

position:4036:-1
position: 4036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7038:-1
position: 7038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4036-7038:-1:exon

EJD96_RS00030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00030
old locus tag: EJD96_00030
inference: COORDINATES: protein motif:HMM:NF024939.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage tail protein
translation: MAGLFGGGTKGINTTGTMALGLQIQTSAYGLGLPIVYGTTRVSGNLIWYGDFTPIAHTTSSSAGGGGGKGGGGGGESTNTTYTYTAGLAIAICEGPIASVNGVFVDKSYYDVGRLFSYFKGTYPQAPWSYLATYHPDQAISYQGIAYVAAGAYDLGSNTSLPNHNYVVTGRLPFDVAAGVLDANPRDIVLDFLTNPNYGAGYPVDKVGNWDAYSNYCLAQGILLSPAYSNQQDAATTLTTLMQLTNSAIYFSEDMLKITPYGDQTVSGNGATFVPNLAPIYDLTDDHFISGDGEDPVRATRNTVDDAFNSAKLEFLNRNNSYNVETAEAKDQANIDTFGLRPMSMITAHEIADPDVASLVVNLVMQRSLYIRNTYEFRLPWNFCLLEPTDIVTITDSQLGLVRWPVRITSVEESDDGELTFQAEDAPEGVASSPLIPLPASAGYSANYNAAPNNTNPPVIFEAPDLLTVSGLEVWIAASGDATWSGCQVWVSEDGNTYRQIGAVVNPARQGILTSALPTVLDPDTASTLAVDLTQSRGQMSSGTQADADGLNTLCYVDGELIAYRDATLTAQYKYGLQYLRRGAYGTAIKDHAAGTQFARLDGAVFKYPFGAEKIGVTMYVKLPAVNQFGGGLQALADVPAYQYTITGSALNSPLPSVANVVTNFVAGLTQISWDAVSDFRQPAVDYEIRIGPTWDSAQVIGRTPTTSFTAVGDGTYWISAHYLAASSLNVYSYVPVSIVIAGATLTKNVIQSFSEAATGWSGTLSAGLVVQGGELMLQGAGNILAEANVLTVTDVLWYGGVASSGVYDLPASHTVNIGRLAPCNVLMSYTARGQSVHDNVFTIADFLGVADLFASALGAKINVQPQIATAGTDGVYGPWQNFVPGAYNAQYFKARVLVTSSDSQVIAVVSDFMFSVDVPDRLDAYQVATSGTPTTVNFSTPFNGGPAGQSVPSVQATILSAQAGDDCQITGITAGSCVVKVVNAGALVSRTVNLQIQGY
SIO_010081: EJD96_RS00030
subclass of: SO_0000673
so part of: EJD96_RS00030
location: complement(4036..7038)
location: region:4036-7038:-1
so has part: feature:4036-7038:-1:exon

WP_139969252.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4036-7038:-1:exon

EJD96_RS00035
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00035
old locus tag: EJD96_00035
so part of: sequence
location: complement(7039..7458)
location: region:7039-7458:-1
so has part: feature:7039-7458:-1:exon
subclass of: SO_0000010

position:7039:-1
position: 7039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7458:-1
position: 7458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7039-7458:-1:exon

EJD96_RS00035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00035
old locus tag: EJD96_00035
inference: COORDINATES: similar to AA sequence:RefSeq:WP_009658639.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: C40 family peptidase
translation: MTTREAVVDEAMTWLRTPYHHMARVKGGGADCATLLLEVYHAVGLLPKIDVGYYPQDWHFHRDDERYLGWVKQYARRTDNPRPGDIALFKFGRCVSHGAIVTGWPNLIHSYFRLGCVLGSADDGELQGRLDSHWTLFED
SIO_010081: EJD96_RS00035
subclass of: SO_0000673
so part of: EJD96_RS00035
location: complement(7039..7458)
location: region:7039-7458:-1
so has part: feature:7039-7458:-1:exon

WP_139969253.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7039-7458:-1:exon

EJD96_RS00040
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00040
old locus tag: EJD96_00040
so part of: sequence
location: complement(7455..8309)
location: region:7455-8309:-1
so has part: feature:7455-8309:-1:exon
subclass of: SO_0000010

position:7455:-1
position: 7455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8309:-1
position: 8309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7455-8309:-1:exon

EJD96_RS00040
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00040
old locus tag: EJD96_00040
inference: COORDINATES: protein motif:HMM:TIGR02218.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2163 domain-containing protein
translation: MKSANPELIALFASGQPFAMADLYTFFLINGTILRYALWDSDITYQGNLFSSSGPGFSRSKVRCVTGVEVDTLDLNIYANSSHLVNGQPFLAAARAGAFDGANVRVDRVFMTAAPAIVGGIIHFTGVVGPMVVGRTEAKVTISSPLQKLNIQMPRNLFQPGCLHTLYDAGCAVARAAVAVPTAADAATTTRLTTSTLGAYAKGYFDAGYVQFTSGDLAGTTRTVKTFADGIVQLLNPLPTAPAVGDKFNIFPGCDKSQGTCRQKFNNLPNFRAMPYIPVPETSQ
SIO_010081: EJD96_RS00040
subclass of: SO_0000673
so part of: EJD96_RS00040
location: complement(7455..8309)
location: region:7455-8309:-1
so has part: feature:7455-8309:-1:exon

WP_139969254.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7455-8309:-1:exon

EJD96_RS00045
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00045
old locus tag: EJD96_00045
so part of: sequence
location: complement(8306..8905)
location: region:8306-8905:-1
so has part: feature:8306-8905:-1:exon
subclass of: SO_0000010

position:8306:-1
position: 8306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8905:-1
position: 8905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8306-8905:-1:exon

EJD96_RS00045
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00045
old locus tag: EJD96_00045
inference: COORDINATES: protein motif:HMM:NF020901.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF2460 domain-containing protein
translation: MSNAIYPSLPGLAWPVMKQPEFSTSIKKSVSGKEFRAAFMQYPLWTFELTYEYLRNGVAGNDLNTLTGFFLARQGSFDSFLFTEPSDHAVADQLLGVGDGVTTSFQLIRALGTFVEPVQNVNALANIKVNGVVVNNYTLSSTGMVTFTTPPAVNAQLTWSGSYYFRVRFLQDTSQFSQFMQDLWELKKVQFIGSPGNKV
SIO_010081: EJD96_RS00045
subclass of: SO_0000673
so part of: EJD96_RS00045
location: complement(8306..8905)
location: region:8306-8905:-1
so has part: feature:8306-8905:-1:exon

WP_139969255.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8306-8905:-1:exon

EJD96_RS00050
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00050
old locus tag: EJD96_00050
so part of: sequence
location: complement(8908..11355)
location: region:8908-11355:-1
so has part: feature:8908-11355:-1:exon
subclass of: SO_0000010

position:8908:-1
position: 8908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11355:-1
position: 11355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8908-11355:-1:exon

EJD96_RS00050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00050
old locus tag: EJD96_00050
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEHTEAGAKATENMSSVVSGAVKVMSGSFGSILESVKMVAAALAGGALFKETIADTVKEVGEVKKLANAFGETLEAANQMNIQLKLAGMTADDYTGIAMKFDKQLRSNEQGLNALGVVTRNSSNALLSQEQLLQNAVSTMMEFKAGTDRNAVAMAMFGKSAEDSYKLLKLNSEIQERATQLTSMGIGVSAEAAEAVKAYKLESATANIVLGEFSDKIGEAVLPGVTSMKSAFTDIAITILPVVQAAITVLGAAFEVLGAVVKAVCEIIREYVGYVGELIHTLFGWAMPNDIGVLKAIIATLVTPIYLLKGLFQELAQVVQTAMGVIMNTMLMFANVARKALALDFSGAVAAFNEGTEKIKGVVLKHSAEMVKIAEQTRDKIKAAWSGEEEGGHASKKGTKEYQGQDKIEKNTADKSRVAEWDAELNDRKVAYQKEHDLREMSKADEISYWRNILATTSTNAAETLAIRRKINQAQLEAMKKQRADEKALSTEKIDQTQRLAEAEIASAKDVLSTKKELGLITAQDELRGQIDLENQKYQVQLKALQDKMALYENDKVARQKALDEIQLLELTHAKSVQRIGQQIAIDQQKEMAQWVNPIKSAFSQSIAGIIQGTQTLQQAMSRIFQSILLEFVNNLVTKMVDRWIVGELTKRLFSQETLVMLGLEQKAAAAEQVATQQVAGVSGVMSNASIAAAAAMASVAAIPLIGWAMAPAVGAETYATAMAFLPSAAGGYDIPAGVNPLVQTHEKEMILPAKHADTIRRLGESGSGGGGGDTHYHINAMDARSLRDYLKANASSLAPSIKKINRNFTPVKG
SIO_010081: EJD96_RS00050
subclass of: SO_0000673
so part of: EJD96_RS00050
location: complement(8908..11355)
location: region:8908-11355:-1
so has part: feature:8908-11355:-1:exon

WP_139969256.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8908-11355:-1:exon

EJD96_RS00055
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00055
old locus tag: EJD96_00055
so part of: sequence
location: complement(11586..11807)
location: region:11586-11807:-1
so has part: feature:11586-11807:-1:exon
subclass of: SO_0000010

position:11586:-1
position: 11586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11807:-1
position: 11807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11586-11807:-1:exon

EJD96_RS00055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00055
old locus tag: EJD96_00055
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTDNHFSTSFRERREPDEIDKATRPGYLPGVTGVAVQLAIEHLAASEEDCSVVIEKRRNAGGKFSITVNVKK
SIO_010081: EJD96_RS00055
subclass of: SO_0000673
so part of: EJD96_RS00055
location: complement(11586..11807)
location: region:11586-11807:-1
so has part: feature:11586-11807:-1:exon

WP_139969257.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11586-11807:-1:exon

EJD96_RS00060
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00060
old locus tag: EJD96_00060
so part of: sequence
location: complement(12000..12323)
location: region:12000-12323:-1
so has part: feature:12000-12323:-1:exon
subclass of: SO_0000010

position:12000:-1
position: 12000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12323:-1
position: 12323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12000-12323:-1:exon

EJD96_RS00060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00060
old locus tag: EJD96_00060
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTANQLIDGAQVKMGGKEWVIPALSLGQIKRLAPKIESLANMSNMLTSDQVSNVCEIVHAALKRNYPDVTIEEVEDMVDMGNMRQVIQTVMGQAGLVARGEAQAVKS
SIO_010081: EJD96_RS00060
subclass of: SO_0000673
so part of: EJD96_RS00060
location: complement(12000..12323)
location: region:12000-12323:-1
so has part: feature:12000-12323:-1:exon

WP_139969258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12000-12323:-1:exon

EJD96_RS00065
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00065
old locus tag: EJD96_00065
so part of: sequence
location: complement(12328..13095)
location: region:12328-13095:-1
so has part: feature:12328-13095:-1:exon
subclass of: SO_0000010

position:12328:-1
position: 12328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13095:-1
position: 13095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12328-13095:-1:exon

EJD96_RS00065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00065
old locus tag: EJD96_00065
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQYAFGSGNMYVTQLQDALGNAVVGATPYPLMTLQEGSIDISSDSKELYGQNQFPVAVGRGKAKLTGKVKPARIFAGVWNAIYFGQTVNAGLFANYTDTVGTVVPASPYTITAAPPNTGTFAADLGVIDANGNPMKRVASAPATGQYMVNVTTGVYTFASTDTGKLVYINFQYTAAVAGAQKQTVQNLPMGYAPAFKADLSVSYQGKIVTFSFLKAISTKFSMGFKNEDFAVPEFDFSGFDDGTGNVLTWSTSE
SIO_010081: EJD96_RS00065
subclass of: SO_0000673
so part of: EJD96_RS00065
location: complement(12328..13095)
location: region:12328-13095:-1
so has part: feature:12328-13095:-1:exon

WP_139969259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:12328-13095:-1:exon

EJD96_RS00070
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00070
old locus tag: EJD96_00070
so part of: sequence
location: complement(13156..13572)
location: region:13156-13572:-1
so has part: feature:13156-13572:-1:exon
subclass of: SO_0000010

position:13156:-1
position: 13156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13572:-1
position: 13572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13156-13572:-1:exon

EJD96_RS00070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00070
old locus tag: EJD96_00070
inference: COORDINATES: similar to AA sequence:RefSeq:WP_002238694.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNREQIYAALFAKLSASSAFKTKSRKLRHWADVKDIEQPALFQAQKRELAMTTPGQPTVWSLQVDVYIYVHQKNGMPSTLLNGLLDALADSLAPDPITNKCTLGGLVQHAWIEGAIETDEGTLGDQAVAIVPIVIKAV
SIO_010081: EJD96_RS00070
subclass of: SO_0000673
so part of: EJD96_RS00070
location: complement(13156..13572)
location: region:13156-13572:-1
so has part: feature:13156-13572:-1:exon

WP_139969260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13156-13572:-1:exon

EJD96_RS00075
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00075
old locus tag: EJD96_00075
so part of: sequence
location: complement(13569..14060)
location: region:13569-14060:-1
so has part: feature:13569-14060:-1:exon
subclass of: SO_0000010

position:13569:-1
position: 13569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14060:-1
position: 14060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13569-14060:-1:exon

EJD96_RS00075
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00075
old locus tag: EJD96_00075
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004935630.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: HK97 gp10 family phage protein
translation: MINGWLVGDASLIAKMEGRADAMQAGLEKSVQRLALQLLTTVKQKLSDDVLRVRTGRLRRSINQRVTVEQTSVTGIVGTNVEYARRLEFGFKGTENVRESLRHITQAFGKPLKAPMTIKVRAHTRKVDFPPHSFLRSALAEMRPQIERDMAAALVKAAREGTA
SIO_010081: EJD96_RS00075
subclass of: SO_0000673
so part of: EJD96_RS00075
location: complement(13569..14060)
location: region:13569-14060:-1
so has part: feature:13569-14060:-1:exon

WP_139969261.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13569-14060:-1:exon

EJD96_RS00080
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00080
old locus tag: EJD96_00080
so part of: sequence
location: complement(14057..14626)
location: region:14057-14626:-1
so has part: feature:14057-14626:-1:exon
subclass of: SO_0000010

position:14057:-1
position: 14057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14626:-1
position: 14626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14057-14626:-1:exon

EJD96_RS00080
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00080
old locus tag: EJD96_00080
inference: COORDINATES: protein motif:HMM:NF016990.2
GO process: GO:0016032 - viral process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: head-tail connector protein
translation: MPVGSNDLTTLANVKQWLGLDASSTDDDELLQRLITAVSGYVQTWLNRTFLISPYVETLDGKGKSRMMCANYPITAVDSVVINGQAIGPSPDIHSPGYYFDDYMIGLRSYCFSRGESNVVLAYHAGFASVPPEIEQACIEVIALRYSEKSRVGYSSKTLAGETIAFTITDFPASVQTVLGNYKKVVPLS
SIO_010081: EJD96_RS00080
subclass of: SO_0000673
so part of: EJD96_RS00080
location: complement(14057..14626)
location: region:14057-14626:-1
so has part: feature:14057-14626:-1:exon

WP_139969262.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14057-14626:-1:exon

EJD96_RS00085
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00085
old locus tag: EJD96_00085
so part of: sequence
location: complement(14630..15025)
location: region:14630-15025:-1
so has part: feature:14630-15025:-1:exon
subclass of: SO_0000010

position:14630:-1
position: 14630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15025:-1
position: 15025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14630-15025:-1:exon

EJD96_RS00085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00085
old locus tag: EJD96_00085
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDTVKLKAPKGASSVSVLGEEYKVVKGLVTVLAEHVAHLVGLGFTSPDGDELTEENDDPLLPAGVKSNLELQPSAGDQARQDAEAQAAAAAEAERAAQAQKDAEAQAAAAAAAGAEGGGGVSQSVPPSGQ
SIO_010081: EJD96_RS00085
subclass of: SO_0000673
so part of: EJD96_RS00085
location: complement(14630..15025)
location: region:14630-15025:-1
so has part: feature:14630-15025:-1:exon

WP_139969263.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14630-15025:-1:exon

EJD96_RS00090
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00090
old locus tag: EJD96_00090
so part of: sequence
location: complement(15102..16619)
location: region:15102-16619:-1
so has part: feature:15102-16619:-1:exon
subclass of: SO_0000010

position:15102:-1
position: 15102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16619:-1
position: 16619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15102-16619:-1:exon

EJD96_RS00090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00090
old locus tag: EJD96_00090
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014235318.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MGANNTAETLVLLKTAQMSPDDLIKSFVQPGTATTGLQAYNLEAPSKKLYPVLTPLRNSIARIGGGYAIQANWKAITSINVSNQRAGVAEGKRGGVINHAQSEYFAAFRGFGLENNVTFEANYASKNYEDVKALAVQSTLEATMIQEERMILGGNTSVAMGTTPTPTLVGSTTGGTLAAGTWSVICVALGLQAYLDMVGVNNGSIGQSLTLASAAVPGQISRTNADGSTDTFGGGNAQKSASATVATTGATGSITGTVAVVNGAVGYAWFWGAAGSEVLGAVTSINSVLITAAASGTQTAASLAAVDSSTSAIDFDGLLYQAFKPGSNAQVVSQPTGTAGVGTPLTSDGAGGIVEFEAMFINFYNKYRLSPTKIYVSAQELVNITKKIVANGGAPLLRLNVSADNLGSIQAGVKVGEYLNKVMGVMVPLVVHPNVPAGTIFFFTESLPYPLSNVSNVVQMLMRQDYYQLEWPLRSRKYEYGVYADGVLQHYAPFSMGVLNNIANG
SIO_010081: EJD96_RS00090
subclass of: SO_0000673
so part of: EJD96_RS00090
location: complement(15102..16619)
location: region:15102-16619:-1
so has part: feature:15102-16619:-1:exon

WP_139969264.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:15102-16619:-1:exon

EJD96_RS00095
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00095
old locus tag: EJD96_00095
so part of: sequence
location: complement(16723..18024)
location: region:16723-18024:-1
so has part: feature:16723-18024:-1:exon
subclass of: SO_0000010

position:16723:-1
position: 16723
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18024:-1
position: 18024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16723-18024:-1:exon

EJD96_RS00095
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00095
old locus tag: EJD96_00095
inference: COORDINATES: similar to AA sequence:RefSeq:WP_010951062.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKLYGEISKTEELDDGTIKVWGYASSAVVDSDGETITADAMKAALPDYMKFGAVREMHQAKAAGTAIEAEVQEDGRTWFGAHVVDSEAVKKVKANVYKGFSIGGKATERDELNKSIIKGLRLVEVSLVDRPANPEAVFTMFKADGVDDAAPTPIDTLAELLNKGEITPERLIELAKADKAQPTTDPIKKSMWSVQDFAGTLMSLGWICRDAQDEAAYEGDGSPVPAALRAWLAQGIKIFQDMAAEECAEMLACLKTAAGEVDVIELAARGSDIAKGGKKFSADTKDKLAKAHKAIQDANDHMAAVGYDADDGEDEGDGTDKVAKGELAKVAAAHDALTKALRDAGCEEGQVMVDFVKGLVASRDDMQKQLATLKAQPAPGKALLKAITKGEDVGNTTPAKEEEAVVKMADGSQNEVASLIKQAHKTGGVLARV
SIO_010081: EJD96_RS00095
subclass of: SO_0000673
so part of: EJD96_RS00095
location: complement(16723..18024)
location: region:16723-18024:-1
so has part: feature:16723-18024:-1:exon

WP_139969265.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:16723-18024:-1:exon

EJD96_RS00100
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00100
old locus tag: EJD96_00100
so part of: sequence
location: complement(18026..20320)
location: region:18026-20320:-1
so has part: feature:18026-20320:-1:exon
subclass of: SO_0000010

position:18026:-1
position: 18026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20320:-1
position: 20320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:18026-20320:-1:exon

EJD96_RS00100
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00100
old locus tag: EJD96_00100
inference: COORDINATES: protein motif:HMM:NF016732.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage portal protein
translation: MAIPKGAASATPVEPGLLRRVVEGVRYAVTGQSAWFGPMQPLAPVVGQQEQPSVVGRQFDYPVGFNVQTTPRQNEPISFAQMRALADGYDVMRLVIETRKDQMAKMKWKIRPRDKKAKPDDRCKMVSDFLAMPDKEHTWDEWLRMLLEELFVTDAPTLYVRPTLGGDVFALEPIDGATIKRVLDEHGRTPQPPEVAYQQILKGVPAVDYTREELIYRPRNVRTHKVYGYSPVEQVIMTVNIALRRQLHQLQYYTEGNIPEALASVPANWNPDQIKQFQQYWDWLLEGDTAERRHLKFIPDGVKYIETKSQSLKDEYDEWLARVVCFAFSIAPTPFVKQQNRATAGTAHEQSLQEGLIPIMNWVKGLMDYVVVQVFQFPDLEYAWDEEEALDLVEQADIQDKKIRNGSLTINEARAHDGLEPVEGGDQPVIFTASGVIRLVDALEQAANPPPPPMPFGATAVDPEADDEDPHAGHDHGAAEKPDDKSIPTGKEAVTKAKKAVRSIDRERKSIMALQAQLQDKVAAFLKDQAPKIAAQVVAAKDEVVGKVDASQIRTILERLNFEDWVVLVGEIEPLIEALTKDGGAAALAQIGLKDDEDIVNLTNEKAVAWAKDRAAEWVGMKRDADGSLQPNPNESWQIDESTRELLNSTVAQAIDEGWSNERLAQEIEDSHGFSPERAEMIARTETAFADVAGNMEGYRASGQVAQKQWAASADCCDDCQALDGEVVDLDDNFPNDGGDGPPLHPKCRCDVLPVLTDESNNEE
SIO_010081: EJD96_RS00100
subclass of: SO_0000673
so part of: EJD96_RS00100
location: complement(18026..20320)
location: region:18026-20320:-1
so has part: feature:18026-20320:-1:exon

WP_139969266.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:18026-20320:-1:exon

EJD96_RS00105
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00105
old locus tag: EJD96_00105
so part of: sequence
location: complement(20327..20620)
location: region:20327-20620:-1
so has part: feature:20327-20620:-1:exon
subclass of: SO_0000010

position:20327:-1
position: 20327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20620:-1
position: 20620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20327-20620:-1:exon

EJD96_RS00105
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00105
old locus tag: EJD96_00105
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKMTHRLSPPASGFYNPMTINGVVYSAAAGGTVDVPDHVADVMKANGWTASSDTGVGTTTSRPVPTKVGQTFLDTSLGLTIKWDGKAWRNPVTGAAV
SIO_010081: EJD96_RS00105
subclass of: SO_0000673
so part of: EJD96_RS00105
location: complement(20327..20620)
location: region:20327-20620:-1
so has part: feature:20327-20620:-1:exon

WP_139969267.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20327-20620:-1:exon

EJD96_RS00110
type: Gene
subclass of: SO_0000704
RO_0002162: 964
gene: terL
locus tag: EJD96_RS00110
old locus tag: EJD96_00110
so part of: sequence
location: complement(20617..22047)
location: region:20617-22047:-1
so has part: feature:20617-22047:-1:exon
subclass of: SO_0000010

position:20617:-1
position: 20617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22047:-1
position: 22047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:20617-22047:-1:exon

EJD96_RS00110
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
gene: terL
locus tag: EJD96_RS00110
old locus tag: EJD96_00110
inference: COORDINATES: similar to AA sequence:RefSeq:WP_014235315.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: phage terminase large subunit
translation: MRTYSPEERFVATQLARADLYEFSRWMFVQRKGFIWNRAPHHKIICDALMRVFRGECKRLIINVPPRYSKTELAVINFMAWALGKVPDSEFIHTSYSGKLASKNAFQTRDLVLSQAYHEIFPELVLRHDSKAKDDWKTTAGGCVYAVGDGGTITGYGAGKQRPGFGGAIIIDDPHKADEARSEVIRKGVIDWFQNTLESRKNGPETPIILIMQRLHEDDLAGWLLKGGNGETWENVVIPALQEDGTALWPAKHTVEALRIMQNAAPYMFAGQYQQRPSPAEGGVFKPDNLVTVDAIPAGVVEWVRAWDLAAAIDGDYTAGPKLGKLPDGRYIIADMVRDRMAPDDRDKVMKNTAERDGTGTKISIPQDPGQAGKTQVLDLTRKLAGFSVSSSPESGDKVTRAEPFASQVNVGNVLMLRAPWNQALIDEMRMFPNGSHDDQVDGLSRAFSVFIDNNFGMLDYLAQLAAQKAATQTGP
SIO_010081: EJD96_RS00110
subclass of: SO_0000673
so part of: EJD96_RS00110
location: complement(20617..22047)
location: region:20617-22047:-1
so has part: feature:20617-22047:-1:exon

WP_139969268.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:20617-22047:-1:exon

EJD96_RS00115
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00115
old locus tag: EJD96_00115
so part of: sequence
location: complement(22050..22769)
location: region:22050-22769:-1
so has part: feature:22050-22769:-1:exon
subclass of: SO_0000010

position:22050:-1
position: 22050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:22769:-1
position: 22769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22050-22769:-1:exon

EJD96_RS00115
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00115
old locus tag: EJD96_00115
inference: COORDINATES: protein motif:HMM:NF015550.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: terminase small subunit
translation: MQITPKIRRFVEEYLVDLNGTKAAVRAGYSAKTAKVQASQMLAKPEIKALVEEAKTALSERTQISTSMVLSRLWQQATADPNEIVQYVRECCRYCYGKDHQYQWTKGEYQRKQEEAREAKKETPSCAGGFGFNPKRPPRKDCPECFGDGHGRLLVSDTRNLSPAALAIYAGVKRGKDGLEAKLLDQQVALRQVGEHIGMFNKRVELSAPGGGPIQQRTVTTTMTPEQFQEIARTLMNEY
SIO_010081: EJD96_RS00115
subclass of: SO_0000673
so part of: EJD96_RS00115
location: complement(22050..22769)
location: region:22050-22769:-1
so has part: feature:22050-22769:-1:exon

WP_139969269.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22050-22769:-1:exon

EJD96_RS00120
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00120
old locus tag: EJD96_00120
so part of: sequence
location: complement(22986..23603)
location: region:22986-23603:-1
so has part: feature:22986-23603:-1:exon
subclass of: SO_0000010

position:22986:-1
position: 22986
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23603:-1
position: 23603
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22986-23603:-1:exon

EJD96_RS00120
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00120
old locus tag: EJD96_00120
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNMAEPTLFKDGYQALVFAFNHAGQTIDRPMMNRLAAPTVGKGGMAGLDAIGQAGMIRSQVKKLGKVSEAVLIARTAPRDRPCECKAPCCSGSKLNREWVEAIGYLADYVRTTALAGCTTNGILRTEYVVRYFTHKKLRRTIESIAKDHDIDRNTVSAHAGKVNVLFAGRPARKVKNEYVPAEPGLESLALMQIEELLRDRAVVG
SIO_010081: EJD96_RS00120
subclass of: SO_0000673
so part of: EJD96_RS00120
location: complement(22986..23603)
location: region:22986-23603:-1
so has part: feature:22986-23603:-1:exon

WP_139969270.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:22986-23603:-1:exon

EJD96_RS00125
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00125
old locus tag: EJD96_00125
so part of: sequence
location: complement(23643..24131)
location: region:23643-24131:-1
so has part: feature:23643-24131:-1:exon
subclass of: SO_0000010

position:23643:-1
position: 23643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24131:-1
position: 24131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23643-24131:-1:exon

EJD96_RS00125
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00125
old locus tag: EJD96_00125
inference: COORDINATES: similar to AA sequence:RefSeq:WP_012436136.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: RusA family crossover junction endodeoxyribonuclease
translation: MTPITLILPYPVSANAYWATRIIPANRSTGKPAMAITYVTKEAEAYKTAVGWKVRGAGVREPITGRVQIDVRLYPARPQDWQKRQRQAGASWDDTVRCIDLDNANKVLLDALKGVAIEDDKWVRRIVAERMEPDAEGARVVLTITPLGVEQPQAGLFGDIAA
SIO_010081: EJD96_RS00125
subclass of: SO_0000673
so part of: EJD96_RS00125
location: complement(23643..24131)
location: region:23643-24131:-1
so has part: feature:23643-24131:-1:exon

WP_139969271.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:23643-24131:-1:exon

EJD96_RS24220
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS24220
pseudo: true
so part of: sequence
location: complement(<24431..24739)
location: region:24431-24739:-1
so has part: feature:24431-24739:-1:exon
subclass of: SO_0000010

position:24431:-1
position: 24431
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:24739:-1
position: 24739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24431-24739:-1:exon

EJD96_RS24220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS24220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004152449.1
note: incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
pseudo: true
codon start: 1
transl table: 11
product: Gp49 family protein
SIO_010081: EJD96_RS24220
subclass of: SO_0000673
so part of: EJD96_RS24220
location: complement(<24431..24739)
location: region:24431-24739:-1
so has part: feature:24431-24739:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:24431-24739:-1:exon

EJD96_RS00135
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00135
old locus tag: EJD96_00135
so part of: sequence
location: complement(24773..24991)
location: region:24773-24991:-1
so has part: feature:24773-24991:-1:exon
subclass of: SO_0000010

position:24773:-1
position: 24773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24991:-1
position: 24991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24773-24991:-1:exon

EJD96_RS00135
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00135
old locus tag: EJD96_00135
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKARARLRPFVASERTPNTNANDLRIELNHYFNNVLPARLSTFGRSILNGGPLTCISCGARTQPDGSLPCGH
SIO_010081: EJD96_RS00135
subclass of: SO_0000673
so part of: EJD96_RS00135
location: complement(24773..24991)
location: region:24773-24991:-1
so has part: feature:24773-24991:-1:exon

WP_139969273.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24773-24991:-1:exon

EJD96_RS24000
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS24000
so part of: sequence
location: complement(24988..25734)
location: region:24988-25734:-1
so has part: feature:24988-25734:-1:exon
subclass of: SO_0000010

position:24988:-1
position: 24988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:25734:-1
position: 25734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:24988-25734:-1:exon

EJD96_RS24000
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS24000
inference: COORDINATES: similar to AA sequence:RefSeq:WP_019025346.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRSNENEMPLETSEAEARPYAAPQTTGLRYSATTFKDNGKPILLNADGTRSIFCDVDDGPDDDDGGQLEDAAQVPAQAQPKSMLPWPGESAEQFSRRMEHIAQLAAAGAWQHPDDVAVDLFATVMKQKLAQARDKGRVGWEQCDPVELSVMLRQHVEKGDPRDVANFCMFLWSLGKPIIAIPAPAVAKEPSSTLVLKYCELTNRTPMGIQTVSSSEGWIESTFYQVAERELQAMFAAQAALAQEGGEQ
SIO_010081: EJD96_RS24000
subclass of: SO_0000673
so part of: EJD96_RS24000
location: complement(24988..25734)
location: region:24988-25734:-1
so has part: feature:24988-25734:-1:exon

WP_180937435.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:24988-25734:-1:exon

EJD96_RS00145
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00145
old locus tag: EJD96_00145
so part of: sequence
location: complement(25931..26185)
location: region:25931-26185:-1
so has part: feature:25931-26185:-1:exon
subclass of: SO_0000010

position:25931:-1
position: 25931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26185:-1
position: 26185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25931-26185:-1:exon

EJD96_RS00145
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00145
old locus tag: EJD96_00145
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MPTYRTPSGAVYTIRNNHGRYRPHYGKKESARFVRNERIRQISAYPIRDHDDELDHVPCEGCGEYGEPNFAGGKRYCGGQFCCP
SIO_010081: EJD96_RS00145
subclass of: SO_0000673
so part of: EJD96_RS00145
location: complement(25931..26185)
location: region:25931-26185:-1
so has part: feature:25931-26185:-1:exon

WP_139969274.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:25931-26185:-1:exon

EJD96_RS00150
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00150
old locus tag: EJD96_00150
so part of: sequence
location: complement(26232..26669)
location: region:26232-26669:-1
so has part: feature:26232-26669:-1:exon
subclass of: SO_0000010

position:26232:-1
position: 26232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:26669:-1
position: 26669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26232-26669:-1:exon

EJD96_RS00150
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00150
old locus tag: EJD96_00150
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSDTNRSQCAAYGCPCAATASSGGANWYCTYHFGTEATNWARITLELKRLEWLLTVCRGIRAWYGTERWERVYRLIQKDIVLNQRSDLLFNPETDGNVTNWLRRLENFIDQSARGSLQPSLPVTPQQLAAHDPMQRVQFAAPQAA
SIO_010081: EJD96_RS00150
subclass of: SO_0000673
so part of: EJD96_RS00150
location: complement(26232..26669)
location: region:26232-26669:-1
so has part: feature:26232-26669:-1:exon

WP_139969275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26232-26669:-1:exon

EJD96_RS24005
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS24005
so part of: sequence
location: complement(26666..27826)
location: region:26666-27826:-1
so has part: feature:26666-27826:-1:exon
subclass of: SO_0000010

position:26666:-1
position: 26666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:27826:-1
position: 27826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:26666-27826:-1:exon

EJD96_RS24005
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS24005
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016452840.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MNDLPQPLTPPDCELQDFAFMPLDVSRLRDSELASNETPEACWAAVLIWCASWHQVPAASIPDDEQWIAKQAHYANRGRIDPEWSNVRAGALRGWIKCADGRMYHPVVAEKALDAWKSKLEQRWRSEVARIKKHNQRHNSNLYVPDFDEWVANGRPQGQPLPVPRDNGQCPEDNGSCPPDRGGDTPPEVRDNPGDNGSKRQREGQGQGQGQGQGQGQGQGQGENIKPESSTLAPGGVKLPPHPDDDDRQQQGTPPANRAVQIAVLLRGLGVRPLTSAHPKAHEWAANPKLTDQLLRECVASARDYKPEPEPISPNYLDPIITKALNPPPPKHDNSWRASDQATDAKARELGIVAPLGWTYSQLRDRIQQEIDKRRQSPASPEGAAA
SIO_010081: EJD96_RS24005
subclass of: SO_0000673
so part of: EJD96_RS24005
location: complement(26666..27826)
location: region:26666-27826:-1
so has part: feature:26666-27826:-1:exon

WP_180937436.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:26666-27826:-1:exon

EJD96_RS00165
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00165
old locus tag: EJD96_00165
so part of: sequence
location: complement(27823..28896)
location: region:27823-28896:-1
so has part: feature:27823-28896:-1:exon
subclass of: SO_0000010

position:27823:-1
position: 27823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28896:-1
position: 28896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:27823-28896:-1:exon

EJD96_RS00165
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00165
old locus tag: EJD96_00165
EC number: 2.1.1.-
inference: COORDINATES: similar to AA sequence:RefSeq:WP_016981987.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: site-specific DNA-methyltransferase
translation: MTVTIHVGDSLEILRSLPDESVHCVVTSPPYWALRDYGVDGQIGLEASPAEFIAKLVAVFEEVRRVLRSDGTCWINMGDSYSHGGGGARDDARWPKQATHGNGMPIHGKSQSGLKPKDLMMMPHRLAIALQDSGWWVRQDIVWSKPNPMPESVRDRCTKSHEYIFLLTKSERYFFDQDAISEPVSPNTHSRLSQDVQNQIGSERANGGAKTNGPMKAVGRGVGWGHGTDAEQRQRGRVRKLAEAGSGTKNNGSFDQAMAIMPSVRNKRSVWSIATQSFKEAHFATFPLEIPMICIKAGCPAGGVVLDPFFGAGTTGLASDQLQRHCIGIELNPQYAEMARRRIQADAPLLATVQVAA
SIO_010081: EJD96_RS00165
subclass of: SO_0000673
so part of: EJD96_RS00165
location: complement(27823..28896)
location: region:27823-28896:-1
so has part: feature:27823-28896:-1:exon

WP_139969276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:27823-28896:-1:exon

EJD96_RS00170
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00170
old locus tag: EJD96_00170
so part of: sequence
location: complement(28893..29372)
location: region:28893-29372:-1
so has part: feature:28893-29372:-1:exon
subclass of: SO_0000010

position:28893:-1
position: 28893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29372:-1
position: 29372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:28893-29372:-1:exon

EJD96_RS00170
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00170
old locus tag: EJD96_00170
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MTAQKKRAKAYKPGRLAGENIKLKLQPWKVAALMNPLTSILDQLEQEGTIDVTGQKGVAVFRDHNDGHWYESSVAIAGVVEAFEIHEIRFGLDLHLDGLRKLGKALEYGMPVDAHQTAAARDSLKHIRAATLEMSAGYARDLIQDFQIKEALGQAREAV
SIO_010081: EJD96_RS00170
subclass of: SO_0000673
so part of: EJD96_RS00170
location: complement(28893..29372)
location: region:28893-29372:-1
so has part: feature:28893-29372:-1:exon

WP_139969277.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:28893-29372:-1:exon

EJD96_RS00175
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00175
old locus tag: EJD96_00175
so part of: sequence
location: complement(29369..29710)
location: region:29369-29710:-1
so has part: feature:29369-29710:-1:exon
subclass of: SO_0000010

position:29369:-1
position: 29369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29710:-1
position: 29710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29369-29710:-1:exon

EJD96_RS00175
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00175
old locus tag: EJD96_00175
inference: COORDINATES: protein motif:HMM:NF017113.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: CII family transcriptional regulator
translation: MSTAADKVSSDVQENTRTNAAQIAAVVVQRLSEVTRARAAACIGVHGSTVSRMATEHLDDLALLLAALDLKVVSADSIVCTQEELRFYKLGAFKFLQADLEKDRMREKDKVSA
SIO_010081: EJD96_RS00175
subclass of: SO_0000673
so part of: EJD96_RS00175
location: complement(29369..29710)
location: region:29369-29710:-1
so has part: feature:29369-29710:-1:exon

WP_139969278.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29369-29710:-1:exon

EJD96_RS00180
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00180
old locus tag: EJD96_00180
so part of: sequence
location: complement(29707..29964)
location: region:29707-29964:-1
so has part: feature:29707-29964:-1:exon
subclass of: SO_0000010

position:29707:-1
position: 29707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:29964:-1
position: 29964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29707-29964:-1:exon

EJD96_RS00180
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00180
old locus tag: EJD96_00180
inference: COORDINATES: protein motif:HMM:NF027273.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix domain-containing protein
translation: MEHPIDKAIRVSDLKTVSALARKLGVTRAAVDQWKEDGRRVPPKHCPEIEKISNGEVKCEELNSEVDWQYVRSTGQLPTEAEAHQ
SIO_010081: EJD96_RS00180
subclass of: SO_0000673
so part of: EJD96_RS00180
location: complement(29707..29964)
location: region:29707-29964:-1
so has part: feature:29707-29964:-1:exon

WP_139969279.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29707-29964:-1:exon

EJD96_RS00185
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00185
old locus tag: EJD96_00185
so part of: sequence
location: 29963..30439
location: region:29963-30439:1
so has part: feature:29963-30439:1:exon
subclass of: SO_0000010

position:29963:1
position: 29963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30439:1
position: 30439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29963-30439:1:exon

EJD96_RS00185
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00185
old locus tag: EJD96_00185
inference: COORDINATES: protein motif:HMM:NF024949.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: helix-turn-helix transcriptional regulator
translation: MKSPFESDIYAKDRISIVTTQENLAIKKIGFLYDVAMEIHEWVASARKKAKLTQDQMADALGVTRGNVSAWENNRHEPSLSQLMKIGAICHADMSALFAGTSVATPISVKQAAGWPFKIDYQLYATLPADEKERLDDDVTHFIERWHARNPAKSAKTG
SIO_010081: EJD96_RS00185
subclass of: SO_0000673
so part of: EJD96_RS00185
location: 29963..30439
location: region:29963-30439:1
so has part: feature:29963-30439:1:exon

WP_244940004.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:29963-30439:1:exon

EJD96_RS00190
type: Gene
subclass of: SO_0000704
RO_0002162: 964
gene: bamE
locus tag: EJD96_RS00190
old locus tag: EJD96_00190
so part of: sequence
location: 30564..30971
location: region:30564-30971:1
so has part: feature:30564-30971:1:exon
subclass of: SO_0000010

position:30564:1
position: 30564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:30971:1
position: 30971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30564-30971:1:exon

EJD96_RS00190
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
gene: bamE
locus tag: EJD96_RS00190
old locus tag: EJD96_00190
inference: COORDINATES: similar to AA sequence:RefSeq:WP_011875792.1
GO component: GO:0019867 - outer membrane [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: outer membrane protein assembly factor BamE
translation: MKKTAVSLFLCAAALLSGCASTGNQALASADQAAIDQHLVKGKTTKADVLAYLGPANSVSTSSAAAGETWVYVYASSQAKGATFIPVVGLFAGGATGNSKVLSVSFDQQGVVSRYSFSSSNTDTRLGAPSTTTTN
SIO_010081: EJD96_RS00190
subclass of: SO_0000673
so part of: EJD96_RS00190
location: 30564..30971
location: region:30564-30971:1
so has part: feature:30564-30971:1:exon

WP_139969280.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:30564-30971:1:exon

EJD96_RS00195
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00195
old locus tag: EJD96_00195
so part of: sequence
location: 31143..31433
location: region:31143-31433:1
so has part: feature:31143-31433:1:exon
subclass of: SO_0000010

position:31143:1
position: 31143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31433:1
position: 31433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31143-31433:1:exon

EJD96_RS00195
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00195
old locus tag: EJD96_00195
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQTRTNIDVTPWRFERINPDDKKWTACEILEGDRFVATHVCTEEDAARIVCAANTHADLVAALRLAVETIETHQAFWSRADLESMKAVLAKAGAA
SIO_010081: EJD96_RS00195
subclass of: SO_0000673
so part of: EJD96_RS00195
location: 31143..31433
location: region:31143-31433:1
so has part: feature:31143-31433:1:exon

WP_139969281.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31143-31433:1:exon

EJD96_RS00200
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00200
old locus tag: EJD96_00200
so part of: sequence
location: 31558..31755
location: region:31558-31755:1
so has part: feature:31558-31755:1:exon
subclass of: SO_0000010

position:31558:1
position: 31558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31755:1
position: 31755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31558-31755:1:exon

EJD96_RS00200
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00200
old locus tag: EJD96_00200
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSQLHLIDWRAGLRRQSSNNRPTVSRLERRAKRWAIRIWLVLVHLLAVVGGFCLLALFVKSCGVL
SIO_010081: EJD96_RS00200
subclass of: SO_0000673
so part of: EJD96_RS00200
location: 31558..31755
location: region:31558-31755:1
so has part: feature:31558-31755:1:exon

WP_139969282.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31558-31755:1:exon

EJD96_RS00205
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00205
old locus tag: EJD96_00205
so part of: sequence
location: 31755..32027
location: region:31755-32027:1
so has part: feature:31755-32027:1:exon
subclass of: SO_0000010

position:32027:1
position: 32027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:31755-32027:1:exon

EJD96_RS00205
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00205
old locus tag: EJD96_00205
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MAIDKTGGPAFPGAIAVGPHGEPVPAAFHGVAEGMTLRDYFATHAPIDLAWANDIFYKRNGRNAGWRETLEMLAELRGAYADLMVKERTQ
SIO_010081: EJD96_RS00205
subclass of: SO_0000673
so part of: EJD96_RS00205
location: 31755..32027
location: region:31755-32027:1
so has part: feature:31755-32027:1:exon

WP_139969283.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:31755-32027:1:exon

EJD96_RS00210
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00210
old locus tag: EJD96_00210
so part of: sequence
location: 32024..32212
location: region:32024-32212:1
so has part: feature:32024-32212:1:exon
subclass of: SO_0000010

position:32024:1
position: 32024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32212:1
position: 32212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32024-32212:1:exon

EJD96_RS00210
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00210
old locus tag: EJD96_00210
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKRSTIYAYAGAALVIGLILLMTDADRRAEEAGLLQLNQRLVNKFPTAELAQLATPVQGDER
SIO_010081: EJD96_RS00210
subclass of: SO_0000673
so part of: EJD96_RS00210
location: 32024..32212
location: region:32024-32212:1
so has part: feature:32024-32212:1:exon

WP_139969284.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32024-32212:1:exon

EJD96_RS00215
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00215
old locus tag: EJD96_00215
so part of: sequence
location: 32209..32448
location: region:32209-32448:1
so has part: feature:32209-32448:1:exon
subclass of: SO_0000010

position:32209:1
position: 32209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:32448:1
position: 32448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32209-32448:1:exon

EJD96_RS00215
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00215
old locus tag: EJD96_00215
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MRTIIIELDGPQGAFNVREGDKHTLGVTWDEMLGMVAAMTVPQRVVGSGPYALRTDAEWEEWRQAIKSRAEDDDFREVR
SIO_010081: EJD96_RS00215
subclass of: SO_0000673
so part of: EJD96_RS00215
location: 32209..32448
location: region:32209-32448:1
so has part: feature:32209-32448:1:exon

WP_139969285.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32209-32448:1:exon

EJD96_RS00220
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00220
old locus tag: EJD96_00220
so part of: sequence
location: 32445..33245
location: region:32445-33245:1
so has part: feature:32445-33245:1:exon
subclass of: SO_0000010

position:32445:1
position: 32445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:33245:1
position: 33245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32445-33245:1:exon

EJD96_RS00220
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00220
old locus tag: EJD96_00220
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004349421.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: PD-(D/E)XK nuclease family protein
translation: MSEIRVRASSWGSLFDCAHRWEGEHILGMRKASGLRAQLGTAIHAGTAAFDQANLDGAPISIDDAAGVFVETLHNPEQEVDYNQDDLKPRDGEAIGLKLLARYCSQIAPHMDYQSVEMALKPFVIDCGNGILIRLTGTMDRSRVARVDGRKIIPDIKTGARVIANGVVSIQGRAAQIGTYQLMSENTDGEPTDGGQIIGLQTTASANVGVSRIFDAKRVMVGTETQKGLIEYAAVMFKTGLFPPNPQSQLCSPKYCARWGSCMYHE
SIO_010081: EJD96_RS00220
subclass of: SO_0000673
so part of: EJD96_RS00220
location: 32445..33245
location: region:32445-33245:1
so has part: feature:32445-33245:1:exon

WP_139969286.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:32445-33245:1:exon

EJD96_RS24225
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS24225
so part of: sequence
location: 33265..34560
location: region:33265-34560:1
so has part: feature:33265-34560:1:exon
subclass of: SO_0000010

position:33265:1
position: 33265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:34560:1
position: 34560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:33265-34560:1:exon

EJD96_RS24225
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS24225
inference: COORDINATES: protein motif:HMM:TIGR00616.1
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0006259 - DNA metabolic process [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: recombinase RecT
translation: MSQINTLADVKQGAMRKSPAEVQAMRPKDQIAYFLEQKKGDIAKMLPAHLNPERLMKVAQIAATTTPALLNCDVPSLVGAIGQCAQMGLEPNTVLGHAYLVPFNTKRKDANGNERWVNSVQVIIGYKGLIDLARRSGQIVSIAAHEVCERDKFELVYGLDEKLNHTPSLGERGAVIGFYAVAKLKDGGHCCEFMSLHQVQEIMRGTKSKGGYGPWKDNFVEMGRKTVIRRLAKYLPLSIEFQQAAALDGMAEVGRDQGMGTIDADFLLLPDDAPAVDPDTGEVTGQLSASASVSTPQGTGQRDPAEFDDQGKQNSPASPQQETGAAQTGTAAGPAGETSQQAAQGPQQGAPGQDQQDDGLSYAKVRDSLEKAKDGDVLDVAADLIGQVRDPSQQEELRAFYRERKEALTNPPAAAGTTTRAANPRPTFTAE
SIO_010081: EJD96_RS24225
subclass of: SO_0000673
so part of: EJD96_RS24225
location: 33265..34560
location: region:33265-34560:1
so has part: feature:33265-34560:1:exon

WP_244940005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:33265-34560:1:exon

EJD96_RS00230
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00230
old locus tag: EJD96_00230
so part of: sequence
location: 34575..35195
location: region:34575-35195:1
so has part: feature:34575-35195:1:exon
subclass of: SO_0000010

position:34575:1
position: 34575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35195:1
position: 35195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:34575-35195:1:exon

EJD96_RS00230
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00230
old locus tag: EJD96_00230
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: 3'-5' exonuclease
translation: MRTALFYDDESTGFPLFKEPSEDPRQPHIFQIAAELVDLDTRRTIASMNQLIKPAGWVIPPDVEALTGVSTERAAMFGHDAKDVLAMFFKMWSMATEFRVAHNEQFDARLVRIAILRHYQDNAFADQWKAGAAFCTCTAATPIVNLPPSEKMKAAGRNNPKQPKLSEAYEFFTGQPLRNAHDAGADVAACRLIYFALLDHLTKAAT
SIO_010081: EJD96_RS00230
subclass of: SO_0000673
so part of: EJD96_RS00230
location: 34575..35195
location: region:34575-35195:1
so has part: feature:34575-35195:1:exon

WP_139969287.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:34575-35195:1:exon

EJD96_RS00235
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00235
old locus tag: EJD96_00235
so part of: sequence
location: 35231..35914
location: region:35231-35914:1
so has part: feature:35231-35914:1:exon
subclass of: SO_0000010

position:35231:1
position: 35231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:35914:1
position: 35914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35231-35914:1:exon

EJD96_RS00235
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00235
old locus tag: EJD96_00235
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MFQLETHMVKIISVDLRTEIEEGKDPVGACDISITTDVANDVLNEFATGLKESFYVVADTPQQDLIASETYLPKPKFPGFARFPWKADLEGYTFVVHIGTGGPSEVTMLDVKVNKITFKIKDKAIVEMCFIIRGHDNPGDIDKLRKLLGLEVQISLVPPDKAKQHQIEQGKKNQRLALEDHFSGGEQTSGTGDADAEHDAAEGGQAADDPDSSEVEKAAGQGQYQVE
SIO_010081: EJD96_RS00235
subclass of: SO_0000673
so part of: EJD96_RS00235
location: 35231..35914
location: region:35231-35914:1
so has part: feature:35231-35914:1:exon

WP_139969288.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35231-35914:1:exon

EJD96_RS00240
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00240
old locus tag: EJD96_00240
so part of: sequence
location: 35972..37765
location: region:35972-37765:1
so has part: feature:35972-37765:1:exon
subclass of: SO_0000010

position:35972:1
position: 35972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:37765:1
position: 37765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:35972-37765:1:exon

EJD96_RS00240
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00240
old locus tag: EJD96_00240
inference: COORDINATES: protein motif:HMM:NF024867.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: AAA family ATPase
translation: MKISHIQVDNILGVRTVDIKLPTPVALIAGRNGSGKSSIQEAVRMAISGEVVRAKLKKEYPALVHAGSKAGGVLVGLDDGRSYAFNLPKGQAQISDGLPTGAAIGVALNGQRFAAMKDDERRSFLFAVSGCKLSGEEIKKRLLGRNLNPQLVEMVMPVLRTGFPAGKDFAAEEARKKKGAWQQITGANWGGVASEGWAADKPTVPAVAHTTEDVAKLRQEIDQINKQIGEARAKQQAQAQAKQRRTELQELSKKAPDISGYLKKAEEELAQYEPQVVAMRQRAAGGRPLGLVHDLAYALHDLREVFPVPSTGEDDVPYQVANAALDAYEHAHGEIKPAGEADTEAQNSLPEYERGLEVLKNRATNLKRDFDAATGADQRLAELEAQTDFETDHGAGVQELEQRLGALRTSLAKMTEEIEAAAGAQRDFDAADARTAEAAKVHDEVKAWLAVADACAPDGIPSELLAEALLPVNSALTASAAFSGWASVYIDQDMAITAGKRPYALLSESEQWRVDAMIAQAVAQVTGLRLLMLDRFDVLDLQGRSDAINWLHSLSEEGHIETALVFGTLKQLPAQLPPTFTSFWIANGVIEALREAA
SIO_010081: EJD96_RS00240
subclass of: SO_0000673
so part of: EJD96_RS00240
location: 35972..37765
location: region:35972-37765:1
so has part: feature:35972-37765:1:exon

WP_139969289.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:35972-37765:1:exon

EJD96_RS00245
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00245
old locus tag: EJD96_00245
so part of: sequence
location: 37765..38208
location: region:37765-38208:1
so has part: feature:37765-38208:1:exon
subclass of: SO_0000010

position:38208:1
position: 38208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:37765-38208:1:exon

EJD96_RS00245
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00245
old locus tag: EJD96_00245
inference: COORDINATES: similar to AA sequence:RefSeq:WP_004532285.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: zinc-finger-containing protein
translation: MPRAIQFKPSAKQAALVKNPLPIPTECPYCKGTVGRVDNSVIYGRQYGKWPFAYMCQTPGCDSYVGIHPKTDIPLGTMADKATRNARKRAKAVFSPLWEDEGMTKDQAYAWLAKELGIEDVNHCHVGWFDIAQCNRVVEVCLRRVTA
SIO_010081: EJD96_RS00245
subclass of: SO_0000673
so part of: EJD96_RS00245
location: 37765..38208
location: region:37765-38208:1
so has part: feature:37765-38208:1:exon

WP_139969290.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:37765-38208:1:exon

EJD96_RS00250
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00250
old locus tag: EJD96_00250
so part of: sequence
location: 38205..40430
location: region:38205-40430:1
so has part: feature:38205-40430:1:exon
subclass of: SO_0000010

position:38205:1
position: 38205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40430:1
position: 40430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:38205-40430:1:exon

EJD96_RS00250
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00250
old locus tag: EJD96_00250
inference: COORDINATES: similar to AA sequence:RefSeq:WP_013813829.1
GO function: GO:0008168 - methyltransferase activity [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DNA cytosine methyltransferase
translation: MKRDSFTLPLGLASELLIDNFAGGGGASKGIEQAFGRPVDVAINHDGEALAMHEANHPTTKHYREDVFTVHPGFVTQQQPIGLAWFSPDCKHHSKAKGGKPREKKIRGLAWVCLKWGTFQMPRAIAIENVEEFQDWGPLDEEGSPIKSEKGRTFRAFIDALTTGLDRNHPDVPEIFEALGADFPMDRLYAGLGYKVEWRILRACDYGTPTIRKRLFIFARRDGLPIVWPEPTHGDPKSAAVKAGKLLPYRTAAECIDWSIPCPSIFERTRPLKPATLRRIAKGVMKFVVNSSDPFIVKFSENSTGQQLDEPLHTVMAGAPRFGLVVPSLMHMTHQGADRNAPAGEPLATVTGANRGEQAVVAAHITKFRTGSTGSAIDEPLHTVTAGGDPNPDHQSTGNVMGIVEAKLAPFITEHANASTQRNMSADEPLRTQCAEVKGGHFAVVSATLVDAAHGEESPGGVKRWGSGAHDIETPMGTVVASGNKALVSATLVQTGYGERPGQAPRAPGLDKPLGTVVAGGGKHALVSAMLAKHYGGVVGTGVDVPFGTITTSDHHSVVTANLVHYNAEKRSGEVRASGMQEPLKTQTTENRHAVVTSHLVKLRNNQFGQAVDEPMPTLTAGGGHVGEVRAFLMKFYSEGGQHQGCDEPLHTVPTKDRFGLVMVHGEQYQIVDIGMRMLTPRELARAQGFPDDYVLDPVVNGKPLSKTAQVRMIGNSVCPPLARALLAANFTHERQIARTA
SIO_010081: EJD96_RS00250
subclass of: SO_0000673
so part of: EJD96_RS00250
location: 38205..40430
location: region:38205-40430:1
so has part: feature:38205-40430:1:exon

WP_139969291.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:38205-40430:1:exon

EJD96_RS00255
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00255
old locus tag: EJD96_00255
so part of: sequence
location: 40427..40747
location: region:40427-40747:1
so has part: feature:40427-40747:1:exon
subclass of: SO_0000010

position:40427:1
position: 40427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:40747:1
position: 40747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40427-40747:1:exon

EJD96_RS00255
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00255
old locus tag: EJD96_00255
inference: COORDINATES: ab initio prediction:GeneMarkS-2+
note: Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MSAQETNAEPIKIFGLLMRHPDQEGLIRKHCFGDCGKISLAGCIDDPQTGGLGVCCETKCPWLKGEMDQPYGETMSFGKRHHIYLRAITDSPDHAEPISTASERQP
SIO_010081: EJD96_RS00255
subclass of: SO_0000673
so part of: EJD96_RS00255
location: 40427..40747
location: region:40427-40747:1
so has part: feature:40427-40747:1:exon

WP_139969292.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40427-40747:1:exon

EJD96_RS00260
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00260
old locus tag: EJD96_00260
so part of: sequence
location: 40744..41457
location: region:40744-41457:1
so has part: feature:40744-41457:1:exon
subclass of: SO_0000010

position:40744:1
position: 40744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41457:1
position: 41457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:40744-41457:1:exon

EJD96_RS00260
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00260
old locus tag: EJD96_00260
inference: COORDINATES: similar to AA sequence:RefSeq:WP_020803811.1
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: hypothetical protein
translation: MKEGPILMNGAMVRATLAGDKTNTRRTQGLEFFSDNDAGNWRCVRVSGGNAYFVYGNSPKEHVEKCPYGQPGDRLWVRETCRAEELDDGSDGVRYAADDAFIHIRAGAAEAEAWHKLFNYRGQQGAVVPSIHMPRWASRILLEITSVRVERLWNISEQDALAEGIEKNWTGDPSKGQNGFGTVGWVPDCGWINYMEDMDGEPAYTPQDSFRSLWQSINGRDSWAANPWVWVVEFRRI
SIO_010081: EJD96_RS00260
subclass of: SO_0000673
so part of: EJD96_RS00260
location: 40744..41457
location: region:40744-41457:1
so has part: feature:40744-41457:1:exon

WP_139969293.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:40744-41457:1:exon

EJD96_RS00265
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00265
old locus tag: EJD96_00265
so part of: sequence
location: 41460..41687
location: region:41460-41687:1
so has part: feature:41460-41687:1:exon
subclass of: SO_0000010

position:41460:1
position: 41460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:41687:1
position: 41687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41460-41687:1:exon

EJD96_RS00265
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00265
old locus tag: EJD96_00265
inference: COORDINATES: protein motif:HMM:NF025352.2
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: DUF4224 domain-containing protein
translation: MQAIAQPITLTEEEVVAITGYHRAAFQLRRLEEMGIPAHRRPDNTVMVLRVYATTRPAAEAAPEKQEPKLRLIRK
SIO_010081: EJD96_RS00265
subclass of: SO_0000673
so part of: EJD96_RS00265
location: 41460..41687
location: region:41460-41687:1
so has part: feature:41460-41687:1:exon

WP_139969294.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41460-41687:1:exon

EJD96_RS00270
type: Gene
subclass of: SO_0000704
RO_0002162: 964
locus tag: EJD96_RS00270
old locus tag: EJD96_00270
so part of: sequence
location: 41684..42847
location: region:41684-42847:1
so has part: feature:41684-42847:1:exon
subclass of: SO_0000010

position:41684:1
position: 41684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42847:1
position: 42847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:41684-42847:1:exon

EJD96_RS00270
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 964
locus tag: EJD96_RS00270
old locus tag: EJD96_00270
inference: COORDINATES: protein motif:HMM:NF012798.2
GO function: GO:0003677 - DNA binding [Evidence IEA]
GO process: GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
note: Derived by automated computational analysis using gene prediction method: Protein Homology.
codon start: 1
transl table: 11
product: tyrosine-type recombinase/integrase
translation: MNRSRKTGKGLPRRVYQKHGAYFFVPAEPMLDPKDGKIKRWIPLAKIAEGEAAMLLALGNLLQDDALNVESMRYVCAEFKKHKLNRYTDETKATYGRYLDTIGEAFADFSARQVTTKSWAQFLRQNFSAHPNTAQKYTALARKLFKFVISELGLREDNPIDQIELEDYETTRRLILPTHEQVQAIRQAGMISKVRSDTGKALPTASGPMFACLVDAAYLLWARAIDVRTLKESQIDGEIGGYIRLKPSKTLKTSGKSVDILITPAIWDVIQRARAIKKEYKVHGKPLITGFVFPTRKGTEYSKNGLFSMWDRARDRLGIGKDSPPEERIQFRDLRALGATDAARTKLPIEQIQTRLAHTSPQTSEIYIKEVIAQVSEIDLPLPWPTK
SIO_010081: EJD96_RS00270
subclass of: SO_0000673
so part of: EJD96_RS00270
location: 41684..42847
location: region:41684-42847:1
so has part: feature:41684-42847:1:exon

WP_139969295.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:41684-42847:1:exon