Canis lupus familiaris isolate Mischka breed German Shepherd chromosome 38, alternate assembly UU_Cfam_GSD_1.0, whole genome shotgun sequence.
type: Entry
definition: Canis lupus familiaris isolate Mischka breed German Shepherd chromosome 38, alternate assembly UU_Cfam_GSD_1.0, whole genome shotgun sequence.
sequence version: NC_049259.1
sequence date: 2021-01-08
sequence: sequence
division: CON
label: NC_049259.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA643630
dblink: SAMN13230619
keyword: WGS
keyword: RefSeq
source: Canis lupus familiaris (dog)
organism: Canis lupus familiaris
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021999.1.\nAssembly name: UU_Cfam_GSD_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2020/03/10. The original whole-genome shotgun project has the\naccession JAAHUQ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Date :: JUN-2019\nAssembly Method :: FALCON v. 0.5.0\nAssembly Name :: UU_Cfam_GSD_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Canis lupus familiaris Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 24803098
topology: linear
so has quality: SO_0000987
location: 1..24803098
location: region:1-24803098:1
RO_0002162: 9615

NC_049259
type: RefSeq
SIO_000068: refseq

PRJNA643630
type: BioProject
SIO_000068: bioproject

SAMN13230619
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:24803098:1
position: 24803098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-24803098:1:source
so part of: sequence
organism: Canis lupus familiaris
mol type: genomic DNA
isolate: Mischka
sub species: familiaris
chromosome: 38
sex: female
tissue type: blood
breed: German Shepherd

9615
type: Taxonomy
SIO_000068: taxonomy

BTG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: BTG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 668563..672594
location: region:668563-672594:1
so has part: feature:668563-672594:1:exon
subclass of: SO_0000010

488559
type: Gene
SIO_000068: ncbigene

position:668563:1
position: 668563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:672594:1
position: 672594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668563-672594:1:exon

BTG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: BTG2
product: BTG anti-proliferation factor 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585942.1
SIO_010081: BTG2
subclass of: SO_0000673
so part of: BTG2
location: join(668563..668769,670084..672594)
location: region:668563-672594:1
so has part: feature:668563-668769:1:exon
so has part: feature:670084-672594:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:668563-668769:1:exon

position:668769:1
position: 668769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:670084-672594:1:exon

position:670084:1
position: 670084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

BTG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: BTG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein BTG2
translation: MSRARWTASRADVLPEIAAAAGFVSSLLSTRGCVGEQRLKVFSRALQEALTEHYKHHWFPEKPSKGSGYRCIRINHKMDPIISKVASQIGLSQPQLHRLLPSELTLWVDPYEVSYRIGEDGSICVLYEEAPVAASYGLLTCKNQMMLGRSSPSKNYVMAVSS
SIO_010081: BTG2
subclass of: SO_0000673
so part of: BTG2
location: join(668616..668769,670084..670418)
location: region:668616-670418:1
so has part: feature:668616-668769:1:exon
so has part: feature:670084-670418:1:exon

XP_038441870.1
type: Protein
SIO_000068: ncbiprotein

position:668616:1
position: 668616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:670418:1
position: 670418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:668616-668769:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:670084-670418:1:exon

LOC111094587
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094587
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(678530..683613)
location: region:678530-683613:-1
so has part: feature:678530-683613:-1:exon
subclass of: SO_0000011

111094587
type: Gene
SIO_000068: ncbigene

position:678530:-1
position: 678530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683613:-1
position: 683613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678530-683613:-1:exon

LOC111094587
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094587
product: uncharacterized LOC111094587, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385554.1
SIO_010081: LOC111094587
subclass of: SO_0000673
so part of: LOC111094587
location: complement(join(678530..679420,681538..681704,683002..683082,683429..683613))
location: region:678530-683613:-1
so has part: feature:683429-683613:-1:exon
so has part: feature:683002-683082:-1:exon
so has part: feature:681538-681704:-1:exon
so has part: feature:678530-679420:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683429-683613:-1:exon

position:683429:-1
position: 683429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:683002-683082:-1:exon

position:683002:-1
position: 683002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:683082:-1
position: 683082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:681538-681704:-1:exon

position:681538:-1
position: 681538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:681704:-1
position: 681704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:678530-679420:-1:exon

position:679420:-1
position: 679420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111094587
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094587
product: uncharacterized LOC111094587, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005385553.1
SIO_010081: LOC111094587
subclass of: SO_0000673
so part of: LOC111094587
location: complement(join(680959..681704,683002..683082,683429..683613))
location: region:680959-683613:-1
so has part: feature:683429-683613:-1:exon
so has part: feature:683002-683082:-1:exon
so has part: feature:680959-681704:-1:exon

position:680959:-1
position: 680959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683429-683613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:683002-683082:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:680959-681704:-1:exon

FMOD
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: FMOD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(699365..709547)
location: region:699365-709547:-1
so has part: feature:699365-709547:-1:exon
subclass of: SO_0000010

488560
type: Gene
SIO_000068: ncbigene

position:699365:-1
position: 699365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709547:-1
position: 709547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:699365-709547:-1:exon

FMOD
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: FMOD
product: fibromodulin
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038585943.1
SIO_010081: FMOD
subclass of: SO_0000673
so part of: FMOD
location: complement(join(699365..701209,705703..706690,709367..709547))
location: region:699365-709547:-1
so has part: feature:709367-709547:-1:exon
so has part: feature:705703-706690:-1:exon
so has part: feature:699365-701209:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:709367-709547:-1:exon

position:709367:-1
position: 709367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:705703-706690:-1:exon

position:705703:-1
position: 705703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706690:-1
position: 706690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:699365-701209:-1:exon

position:701209:-1
position: 701209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

FMOD
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: FMOD
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: fibromodulin
translation: MQWASLLLLAGLCTLSWAQYDEDPLWWFHYLRSQQSSYYDPYDPYPYEPYEPYPYGVEEGPAYAYGSPPPPEPRDCPQECDCPPNFPTAMYCDNRNLKYLPFVPSRMKYVYFQNNQISSIQEGVFDNATGLLWIALHGNQITSDKVGRKIFSKLRHLERLYLDHNNLTRMPGPLPRSLKELHLDHNQISRVPNNALEGLENLTALYLQHNEIQEVGSAMRGLRSLILLDLSYNHLRKVPDGLPSALEQLYLEHNNVYSVPDSYFRGSPKLLYVRLSHNSLTNNGLASNTFNSSSLLELDLSYNQLQKIPPVNTNLENLYLQGNRINEFSISSFCTVVDVMNFSKLQVLRLDGNEIKRSAMPVDAPLCLRLASLIEI
SIO_010081: FMOD
subclass of: SO_0000673
so part of: FMOD
location: complement(join(701058..701209,705703..706681))
location: region:701058-706681:-1
so has part: feature:705703-706681:-1:exon
so has part: feature:701058-701209:-1:exon

XP_038441871.1
type: Protein
SIO_000068: ncbiprotein

position:701058:-1
position: 701058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:706681:-1
position: 706681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:705703-706681:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:701058-701209:-1:exon

LOC111094576
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094576
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 719512..730400
location: region:719512-730400:1
so has part: feature:719512-730400:1:exon
subclass of: SO_0000011

111094576
type: Gene
SIO_000068: ncbigene

position:719512:1
position: 719512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730400:1
position: 730400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:719512-730400:1:exon

LOC111094576
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094576
product: uncharacterized LOC111094576, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005385555.1
SIO_010081: LOC111094576
subclass of: SO_0000673
so part of: LOC111094576
location: join(719512..719931,721061..722073,725178..725273,726695..730400)
location: region:719512-730400:1
so has part: feature:719512-719931:1:exon
so has part: feature:721061-722073:1:exon
so has part: feature:725178-725273:1:exon
so has part: feature:726695-730400:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:719512-719931:1:exon

position:719931:1
position: 719931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:721061-722073:1:exon

position:721061:1
position: 721061
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:722073:1
position: 722073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:725178-725273:1:exon

position:725178:1
position: 725178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:725273:1
position: 725273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:726695-730400:1:exon

position:726695:1
position: 726695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111094579
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094579
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(734556..766604)
location: region:734556-766604:-1
so has part: feature:734556-766604:-1:exon
subclass of: SO_0000011

111094579
type: Gene
SIO_000068: ncbigene

position:734556:-1
position: 734556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766604:-1
position: 766604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734556-766604:-1:exon

LOC111094579
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094579
product: uncharacterized LOC111094579
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_005385556.1
SIO_010081: LOC111094579
subclass of: SO_0000673
so part of: LOC111094579
location: complement(join(734556..734866,766095..766220,766466..766604))
location: region:734556-766604:-1
so has part: feature:766466-766604:-1:exon
so has part: feature:766095-766220:-1:exon
so has part: feature:734556-734866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:766466-766604:-1:exon

position:766466:-1
position: 766466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766095-766220:-1:exon

position:766095:-1
position: 766095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766220:-1
position: 766220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:734556-734866:-1:exon

position:734866:-1
position: 734866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRELP
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: PRELP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 795591..809246
location: region:795591-809246:1
so has part: feature:795591-809246:1:exon
subclass of: SO_0000010

488561
type: Gene
SIO_000068: ncbigene

position:795591:1
position: 795591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:809246:1
position: 809246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795591-809246:1:exon

PRELP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PRELP
product: proline and arginine rich end leucine rich repeat protein, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 91 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585945.1
SIO_010081: PRELP
subclass of: SO_0000673
so part of: PRELP
location: join(795591..795774,803323..804302,806677..809246)
location: region:795591-809246:1
so has part: feature:795591-795774:1:exon
so has part: feature:803323-804302:1:exon
so has part: feature:806677-809246:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:795591-795774:1:exon

position:795774:1
position: 795774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803323-804302:1:exon

position:803323:1
position: 803323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804302:1
position: 804302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:806677-809246:1:exon

position:806677:1
position: 806677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PRELP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PRELP
product: proline and arginine rich end leucine rich repeat protein, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 93 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585944.1
SIO_010081: PRELP
subclass of: SO_0000673
so part of: PRELP
location: join(795592..795784,803323..804302,806677..809246)
location: region:795592-809246:1
so has part: feature:795592-795784:1:exon
so has part: feature:803323-804302:1:exon
so has part: feature:806677-809246:1:exon

position:795592:1
position: 795592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:795592-795784:1:exon

position:795784:1
position: 795784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:803323-804302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:806677-809246:1:exon

PRELP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PRELP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolargin
translation: MRSSLCWLLPLLLILASVAQGQLTRRPRPRPRPRPRPRPTPSFSQPYEPPEPTDLPPPLPPGPPSIFPDCPRECYCPSDFPSALYCDSRNLRKVPIIPPRIHYLYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQKVLEKLPSLVFLYMEKNQLEEVPSALPRNLEQLRLSQNQISRIPPGVFSKLDSLLLLDLQHNKLSDGVFKPDTFQGLKNLMQLNLAHNILRKMPPKVPAAIHQLYLDSNKIETIPNGYFKGFPNLAFIRLNYNRLSDRGLPKNSFNISNLLVLHLSHNKISSVPAINNKLEHLYLNNNSIEKINGTQICPNNLVAFHDFSSDLENVPHLRYLRLDGNHLKPPIPLDLMMCFRLLQSVVI
SIO_010081: PRELP
subclass of: SO_0000673
so part of: PRELP
location: join(803339..804302,806677..806852)
location: region:803339-806852:1
so has part: feature:803339-804302:1:exon
so has part: feature:806677-806852:1:exon

XP_038441872.1
type: Protein
SIO_000068: ncbiprotein

position:803339:1
position: 803339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806852:1
position: 806852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:803339-804302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806677-806852:1:exon

PRELP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PRELP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: prolargin
translation: MRSSLCWLLPLLLILASVAQGQLTRRPRPRPRPRPRPRPTPSFSQPYEPPEPTDLPPPLPPGPPSIFPDCPRECYCPSDFPSALYCDSRNLRKVPIIPPRIHYLYLQNNFITELPVESFQNATGLRWINLDNNRIRKIDQKVLEKLPSLVFLYMEKNQLEEVPSALPRNLEQLRLSQNQISRIPPGVFSKLDSLLLLDLQHNKLSDGVFKPDTFQGLKNLMQLNLAHNILRKMPPKVPAAIHQLYLDSNKIETIPNGYFKGFPNLAFIRLNYNRLSDRGLPKNSFNISNLLVLHLSHNKISSVPAINNKLEHLYLNNNSIEKINGTQICPNNLVAFHDFSSDLENVPHLRYLRLDGNHLKPPIPLDLMMCFRLLQSVVI
SIO_010081: PRELP
subclass of: SO_0000673
so part of: PRELP
location: join(803339..804302,806677..806852)
location: region:803339-806852:1
so has part: feature:803339-804302:1:exon
so has part: feature:806677-806852:1:exon

XP_038441873.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:803339-804302:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:806677-806852:1:exon

OPTC
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: OPTC
note: opticin; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 812328..820173
location: region:812328-820173:1
so has part: feature:812328-820173:1:exon
subclass of: SO_0000010

403591
type: Gene
SIO_000068: ncbigene

position:812328:1
position: 812328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820173:1
position: 820173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:812328-820173:1:exon

OPTC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: OPTC
product: opticin
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001003056.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions, 1 frameshift compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001003056.1
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: join(812328..812364,813545..813828,814755..814890,816386..816544,817328..817530,818672..818767,819270..820173)
location: region:812328-820173:1
so has part: feature:812328-812364:1:exon
so has part: feature:813545-813828:1:exon
so has part: feature:814755-814890:1:exon
so has part: feature:816386-816544:1:exon
so has part: feature:817328-817530:1:exon
so has part: feature:818672-818767:1:exon
so has part: feature:819270-820173:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:812328-812364:1:exon

position:812364:1
position: 812364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:813545-813828:1:exon

position:813545:1
position: 813545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813828:1
position: 813828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:814755-814890:1:exon

position:814755:1
position: 814755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814890:1
position: 814890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:816386-816544:1:exon

position:816386:1
position: 816386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816544:1
position: 816544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:817328-817530:1:exon

position:817328:1
position: 817328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817530:1
position: 817530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:818672-818767:1:exon

position:818672:1
position: 818672
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818767:1
position: 818767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:819270-820173:1:exon

position:819270:1
position: 819270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

OPTC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: OPTC
inference: similar to AA sequence (same species):RefSeq:NP_001003056.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution, 1 frameshift compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: opticin precursor
translation: MKLPAFLSLLALVLLEAGTASLPKERKRRDEMHGEGDSYVVLGNYVLGPDNYDEVIDLSDYEGLMDYGDQLPEAKVTNLAPPTGISSAQSTMTPRTLSLKPTMIRPTELGVLGSPNSHGLPTCLICVCLGSSVYCDDADLENIPPLPKTTTYLYARFNRIRRIRAGDFKGLTKLKRIDLSSNSISSIDDDALRLLPALQDLILPENQLAALPALPPAIEVLDARHNQLQSSGIQPEALRALEKLQFLYLADNLLDSIPGPLPPSLRSLHLQNNLIETMQTDAFCDPEEHKHSRRWLEDIRLDGNPINLGLFPSAYFCLPRLPTGHCC
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: join(813609..813828,814755..814890,816386..816544,817328..817530,818672..818767,819270..819440)
location: region:813609-819440:1
so has part: feature:813609-813828:1:exon
so has part: feature:814755-814890:1:exon
so has part: feature:816386-816544:1:exon
so has part: feature:817328-817530:1:exon
so has part: feature:818672-818767:1:exon
so has part: feature:819270-819440:1:exon

NP_001003056.1
type: Protein
SIO_000068: ncbiprotein

position:813609:1
position: 813609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819440:1
position: 819440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813609-813828:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:814755-814890:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:816386-816544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:817328-817530:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:818672-818767:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:819270-819440:1:exon

OPTC
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9615
gene: OPTC
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 813609..813668
location: region:813609-813668:1
so has part: feature:813609-813668:1:exon

position:813668:1
position: 813668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813609-813668:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: Cleavage, by MMP7. /evidence=ECO:0000250|UniProtKB:Q9UBM4; propagated from UniProtKB/Swiss-Prot (P83286.1); cleavage site
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 813666..813671
location: region:813666-813671:1
so has part: feature:813666-813671:1:exon

position:813666:1
position: 813666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813671:1
position: 813671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813666-813671:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: Sulfotyrosine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P83286.1); sulfatation site
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 813789..813791
location: region:813789-813791:1
so has part: feature:813789-813791:1:exon

position:813789:1
position: 813789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813791:1
position: 813791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813789-813791:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: Sulfotyrosine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P83286.1); sulfatation site
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 813807..813809
location: region:813807-813809:1
so has part: feature:813807-813809:1:exon

position:813807:1
position: 813807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:813809:1
position: 813809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:813807-813809:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: Cleavage, by MMP13. /evidence=ECO:0000250|UniProtKB:P58874; propagated from UniProtKB/Swiss-Prot (P83286.1); cleavage site
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 814862..814867
location: region:814862-814867:1
so has part: feature:814862-814867:1:exon

position:814862:1
position: 814862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:814867:1
position: 814867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:814862-814867:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: propagated from UniProtKB/Swiss-Prot (P83286.1); Region: LRR 1
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 816474..816539
location: region:816474-816539:1
so has part: feature:816474-816539:1:exon

position:816474:1
position: 816474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:816539:1
position: 816539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:816474-816539:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: propagated from UniProtKB/Swiss-Prot (P83286.1); Region: LRR 2
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 817329..817394
location: region:817329-817394:1
so has part: feature:817329-817394:1:exon

position:817329:1
position: 817329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817394:1
position: 817394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817329-817394:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: propagated from UniProtKB/Swiss-Prot (P83286.1); Region: LRR 3
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 817401..817466
location: region:817401-817466:1
so has part: feature:817401-817466:1:exon

position:817401:1
position: 817401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817466:1
position: 817466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817401-817466:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: propagated from UniProtKB/Swiss-Prot (P83286.1); Region: LRR 4
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 817467..817523
location: region:817467-817523:1
so has part: feature:817467-817523:1:exon

position:817467:1
position: 817467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:817523:1
position: 817523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:817467-817523:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: propagated from UniProtKB/Swiss-Prot (P83286.1); Region: LRR 5
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 818680..818742
location: region:818680-818742:1
so has part: feature:818680-818742:1:exon

position:818680:1
position: 818680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:818742:1
position: 818742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818680-818742:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: propagated from UniProtKB/Swiss-Prot (P83286.1); Region: LRR 6
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: join(818743..818767,819270..819310)
location: region:818743-819310:1
so has part: feature:818743-818767:1:exon
so has part: feature:819270-819310:1:exon

position:818743:1
position: 818743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819310:1
position: 819310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:818743-818767:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:819270-819310:1:exon

OPTC
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: OPTC
note: propagated from UniProtKB/Swiss-Prot (P83286.1); Region: LRR 7
SIO_010081: OPTC
subclass of: SO_0000673
so part of: OPTC
location: 819338..819400
location: region:819338-819400:1
so has part: feature:819338-819400:1:exon

position:819338:1
position: 819338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819400:1
position: 819400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819338-819400:1:exon

ATP2B4
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 918139..1017502
location: region:918139-1017502:1
so has part: feature:918139-1017502:1:exon
subclass of: SO_0000010

403731
type: Gene
SIO_000068: ncbigene

position:918139:1
position: 918139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017502:1
position: 1017502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:918139-1017502:1:exon

ATP2B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP2B4
product: ATPase plasma membrane Ca2+ transporting 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038585953.1
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(918139..918650,963631..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1007788..1007895,1012880..1017502)
location: region:918139-1017502:1
so has part: feature:918139-918650:1:exon
so has part: feature:963631-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:980190-980225:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1007788-1007895:1:exon
so has part: feature:1012880-1017502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:918139-918650:1:exon

position:918650:1
position: 918650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:963631-964280:1:exon

position:963631:1
position: 963631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:964280:1
position: 964280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976790-976987:1:exon

position:976790:1
position: 976790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976987:1
position: 976987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:977623-977880:1:exon

position:977623:1
position: 977623
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:977880:1
position: 977880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:978346-978471:1:exon

position:978346:1
position: 978346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:978471:1
position: 978471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:978962-979087:1:exon

position:978962:1
position: 978962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:979087:1
position: 979087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:980190-980225:1:exon

position:980190:1
position: 980190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:980225:1
position: 980225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:981787-981948:1:exon

position:981787:1
position: 981787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981948:1
position: 981948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:984914-985128:1:exon

position:984914:1
position: 984914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985128:1
position: 985128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:985478-985720:1:exon

position:985478:1
position: 985478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:985720:1
position: 985720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:986281-986522:1:exon

position:986281:1
position: 986281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:986522:1
position: 986522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:989875-990106:1:exon

position:989875:1
position: 989875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:990106:1
position: 990106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:990972-991151:1:exon

position:990972:1
position: 990972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:991151:1
position: 991151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:992003-992090:1:exon

position:992003:1
position: 992003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:992090:1
position: 992090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:993603-993709:1:exon

position:993603:1
position: 993603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:993709:1
position: 993709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:999169-999360:1:exon

position:999169:1
position: 999169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:999360:1
position: 999360
reference: sequence
type: ForwardStrandPosition
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ATP2B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP2B4
product: ATPase plasma membrane Ca2+ transporting 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_038585952.1
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
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location: region:918141-1013115:1
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ATP2B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP2B4
product: ATPase plasma membrane Ca2+ transporting 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_038585950.1
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(918142..918650,963631..964280,976790..976987,977623..977880,978346..978471,978962..979087,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1012880..1017502)
location: region:918142-1017502:1
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ATP2B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP2B4
product: ATPase plasma membrane Ca2+ transporting 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 EST, 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_038585951.1
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
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location: region:918142-1013115:1
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ATP2B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP2B4
product: ATPase plasma membrane Ca2+ transporting 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038585948.1
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
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location: region:918143-1017502:1
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position:918143:1
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ATP2B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP2B4
product: ATPase plasma membrane Ca2+ transporting 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_038585946.1
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(918143..918650,963631..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1012880..1017502)
location: region:918143-1017502:1
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urn:…
SIO_000300: 15
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1012880-1017502:1:exon

LOC102153438
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102153438
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(959598..963774)
location: region:959598-963774:-1
so has part: feature:959598-963774:-1:exon
subclass of: SO_0000011

102153438
type: Gene
SIO_000068: ncbigene

position:959598:-1
position: 959598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:963774:-1
position: 963774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:959598-963774:-1:exon

LOC102153438
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102153438
product: uncharacterized LOC102153438
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005385557.1
SIO_010081: LOC102153438
subclass of: SO_0000673
so part of: LOC102153438
location: complement(join(959598..959717,961559..961648,963557..963774))
location: region:959598-963774:-1
so has part: feature:963557-963774:-1:exon
so has part: feature:961559-961648:-1:exon
so has part: feature:959598-959717:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:963557-963774:-1:exon

position:963557:-1
position: 963557
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:961559-961648:-1:exon

position:961559:-1
position: 961559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:961648:-1
position: 961648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:959598-959717:-1:exon

position:959717:-1
position: 959717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP2B4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP2B4
product: ATPase plasma membrane Ca2+ transporting 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038585949.1
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(963608..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1012880..1017502)
location: region:963608-1017502:1
so has part: feature:963608-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:980190-980225:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1012880-1017502:1:exon

position:963608:1
position: 963608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:963608-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980190-980225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1012880-1017502:1:exon

ATP2B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 4 isoform X5
translation: MTNPTEHALPANSTVESREGDFGCTVMDLRKLMELRSTDGVDQINVHYGGVMNLCSRLKTNPVEGLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGEENKQCGLPVSSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNRIEKEQKFAVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGANEGEEEEKKKKGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRRPWLSECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYHQLPSPDVLVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTVIEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTLCIAYRDFNDGEPPWDNESEILTELTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRKAPLHSPPSQHYTIIFNTFVLMQLFNEINSRKIHGERNVFAGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKLTLSQWFWCLFIGIGELLWGQIISTIPTQSLKFLKEAGHGTTKEEITKDAEGLDEIDHAEMELRRGQILWFRGLNRIQTQIDVINTFQTGASFKGVLKRQTMGQHLDVKHVPSSSYIKVVKAFHSSLHESIQKPKNQNSIHNFMTHPEFAIDEEVPRTPLLDEHEEENLEVPKAGTRVLLLDGEVTPYANKNNNAVDCSQVQIIASHSDSPLHSLETSV
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(964088..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1007788..1007895,1012880..1013191)
location: region:964088-1013191:1
so has part: feature:964088-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:980190-980225:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1007788-1007895:1:exon
so has part: feature:1012880-1013191:1:exon

XP_038441881.1
type: Protein
SIO_000068: ncbiprotein

position:964088:1
position: 964088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1013191:1
position: 1013191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964088-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980190-980225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1007788-1007895:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1012880-1013191:1:exon

ATP2B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 4 isoform X1
translation: MTNPTEHALPANSTVESREGDFGCTVMDLRKLMELRSTDGVDQINVHYGGVMNLCSRLKTNPVEGLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGEENKQCGLPVSSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNRIEKEQKFAVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGANEGEEEEKKKKGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRRPWLSECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYHQLPSPDVLVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTVIEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTLCIAYRDFNDGEPPWDNESEILTELTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRKAPLHSPPSQHYTIIFNTFVLMQLFNEINSRKIHGERNVFAGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKLTLSQWFWCLFIGIGELLWGQIISTIPTQSLKFLKEAGHGTTKEEITKDAEGLDEIDHAEMELRRGQILWFRGLNRIQTQIKVVKAFHSSLHESIQKPKNQNSIHNFMTHPEFAIDEEVPRTPLLDEHEEENLEVPKAGTRVLLLDGEVTPYANKNNNAVDCSQVQIIASHSDSPLHSLETSV
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(964088..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1012880..1013191)
location: region:964088-1013191:1
so has part: feature:964088-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:980190-980225:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1012880-1013191:1:exon

XP_038441874.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964088-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980190-980225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1012880-1013191:1:exon

ATP2B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 4 isoform X1
translation: MTNPTEHALPANSTVESREGDFGCTVMDLRKLMELRSTDGVDQINVHYGGVMNLCSRLKTNPVEGLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGEENKQCGLPVSSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNRIEKEQKFAVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGANEGEEEEKKKKGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRRPWLSECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYHQLPSPDVLVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTVIEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTLCIAYRDFNDGEPPWDNESEILTELTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRKAPLHSPPSQHYTIIFNTFVLMQLFNEINSRKIHGERNVFAGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKLTLSQWFWCLFIGIGELLWGQIISTIPTQSLKFLKEAGHGTTKEEITKDAEGLDEIDHAEMELRRGQILWFRGLNRIQTQIKVVKAFHSSLHESIQKPKNQNSIHNFMTHPEFAIDEEVPRTPLLDEHEEENLEVPKAGTRVLLLDGEVTPYANKNNNAVDCSQVQIIASHSDSPLHSLETSV
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(964088..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1012880..1013191)
location: region:964088-1013191:1
so has part: feature:964088-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:980190-980225:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1012880-1013191:1:exon

XP_038441876.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964088-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980190-980225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1012880-1013191:1:exon

ATP2B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 4 isoform X1
translation: MTNPTEHALPANSTVESREGDFGCTVMDLRKLMELRSTDGVDQINVHYGGVMNLCSRLKTNPVEGLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGEENKQCGLPVSSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNRIEKEQKFAVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGANEGEEEEKKKKGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRRPWLSECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYHQLPSPDVLVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTVIEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTLCIAYRDFNDGEPPWDNESEILTELTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRKAPLHSPPSQHYTIIFNTFVLMQLFNEINSRKIHGERNVFAGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKLTLSQWFWCLFIGIGELLWGQIISTIPTQSLKFLKEAGHGTTKEEITKDAEGLDEIDHAEMELRRGQILWFRGLNRIQTQIKVVKAFHSSLHESIQKPKNQNSIHNFMTHPEFAIDEEVPRTPLLDEHEEENLEVPKAGTRVLLLDGEVTPYANKNNNAVDCSQVQIIASHSDSPLHSLETSV
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(964088..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1012880..1013191)
location: region:964088-1013191:1
so has part: feature:964088-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:980190-980225:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1012880-1013191:1:exon

XP_038441877.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964088-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980190-980225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1012880-1013191:1:exon

ATP2B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 4 isoform X2
translation: MTNPTEHALPANSTVESREGDFGCTVMDLRKLMELRSTDGVDQINVHYGGVMNLCSRLKTNPVEGLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGEENKQCGLPVSSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNRIEKEQKFAVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGANEGEEEEKKKKAKTQDGVALEIQPLNSQEGIDNEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRRPWLSECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYHQLPSPDVLVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTVIEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTLCIAYRDFNDGEPPWDNESEILTELTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRKAPLHSPPSQHYTIIFNTFVLMQLFNEINSRKIHGERNVFAGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKLTLSQWFWCLFIGIGELLWGQIISTIPTQSLKFLKEAGHGTTKEEITKDAEGLDEIDHAEMELRRGQILWFRGLNRIQTQIKVVKAFHSSLHESIQKPKNQNSIHNFMTHPEFAIDEEVPRTPLLDEHEEENLEVPKAGTRVLLLDGEVTPYANKNNNAVDCSQVQIIASHSDSPLHSLETSV
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(964088..964280,976790..976987,977623..977880,978346..978471,978962..979087,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1012880..1013191)
location: region:964088-1013191:1
so has part: feature:964088-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1012880-1013191:1:exon

XP_038441878.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964088-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1012880-1013191:1:exon

ATP2B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 4 isoform X3
translation: MTNPTEHALPANSTVESREGDFGCTVMDLRKLMELRSTDGVDQINVHYGGVMNLCSRLKTNPVEGLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGEENKQCGLPVSSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNRIEKEQKFAVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGANEGEEEEKKKKGKKQGVPENRNKAKTQDGVALEIQPLNSQEGIDNEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRRPWLSECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYHQLPSPDVLVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTVIEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTLCIAYRDFNDGEPPWDNESEILTELTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRKAPLHSPPSQHYTIIFNTFVLMQLFNEINSRKIHGERNVFAGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKLTLSQWFWCLFIGIGELLWGQIISTIPTQSLKFLKEAGHGTTKEEITKDAEGLDEIDHAEMELRRGQILWFRGLNRIQTQIDVINTFQTGASFKGVLKRQTMGQHLDVKHVPSSSYVTVAPVTSPPTTSVPAAVSSPTLGNQSGESVP
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(964088..964280,976790..976987,977623..977880,978346..978471,978962..979087,980190..980225,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1007788..1007968,1012880..1012905)
location: region:964088-1012905:1
so has part: feature:964088-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:980190-980225:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1007788-1007968:1:exon
so has part: feature:1012880-1012905:1:exon

XP_038441879.1
type: Protein
SIO_000068: ncbiprotein

position:1012905:1
position: 1012905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:964088-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:980190-980225:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1007788-1007968:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1012880-1012905:1:exon

ATP2B4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP2B4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: plasma membrane calcium-transporting ATPase 4 isoform X4
translation: MTNPTEHALPANSTVESREGDFGCTVMDLRKLMELRSTDGVDQINVHYGGVMNLCSRLKTNPVEGLSGNPADLEKRKQVFGQNLIPPKKPKTFLELVWEALQDVTLIILEIAAIISLVLSFYRPPGEENKQCGLPVSSPEDEGEAEAGWIEGAAILFSVIIVVLVTAFNDWSKEKQFRGLQNRIEKEQKFAVIRNGHIIQLPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDESSLTGESDHVKKSLERDPMLLSGTHVMEGSGRMVVTAVGINSQTGIIFTLLGANEGEEEEKKKKAKTQDGVALEIQPLNSQEGIDNEEKEKKAAKLPKKEKSVLQGKLTRLAVQIGKAGLIMSAITVLILILYFVIDNFVIHRRPWLSECTPIYIQYFVKFFIIGITVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIGDTHYHQLPSPDVLVPKVLDLIVNGISINSAYTSKILPPEKEGGLPRQVGNKTECALLGFVTDLKQDYHAVRNEVPEEKLYKVYTFNSVRKSMSTVIEKPSGGYRMYSKGASEIILRKCNRILDKRGEVVPFKNKDRDEMVRTVIEPMASQGLRTLCIAYRDFNDGEPPWDNESEILTELTCIAVVGIEDPVRPEVPEAIAKCKRAGITVRMVTGDNINTARAIATKCGIVTPGDDFLCLEGKEFNRLIRNEKGEVEQEKLDKIWPKLRVLARSSPTDKHTLVKGIIDSTVGEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASLALATEPPTESLLKRRPYGRNKPLISRTMMKNILGHAVYQLTVIFFLVFAGEKFFDIDSGRKAPLHSPPSQHYTIIFNTFVLMQLFNEINSRKIHGERNVFAGIFRNLIFCSVVLGTFISQIIIVEFGGKPFSCTKLTLSQWFWCLFIGIGELLWGQIISTIPTQSLKFLKEAGHGTTKEEITKDAEGLDEIDHAEMELRRGQILWFRGLNRIQTQIDVINTFQTGASFKGVLKRQTMGQHLDVKHVPSSSYVTVAPVTSPPTTSVPAAVSSPTLGNQSGESVP
SIO_010081: ATP2B4
subclass of: SO_0000673
so part of: ATP2B4
location: join(964088..964280,976790..976987,977623..977880,978346..978471,978962..979087,981787..981948,984914..985128,985478..985720,986281..986522,989875..990106,990972..991151,992003..992090,993603..993709,999169..999360,999821..1000034,1000856..1001067,1002070..1002177,1004168..1004344,1007788..1007968,1012880..1012905)
location: region:964088-1012905:1
so has part: feature:964088-964280:1:exon
so has part: feature:976790-976987:1:exon
so has part: feature:977623-977880:1:exon
so has part: feature:978346-978471:1:exon
so has part: feature:978962-979087:1:exon
so has part: feature:981787-981948:1:exon
so has part: feature:984914-985128:1:exon
so has part: feature:985478-985720:1:exon
so has part: feature:986281-986522:1:exon
so has part: feature:989875-990106:1:exon
so has part: feature:990972-991151:1:exon
so has part: feature:992003-992090:1:exon
so has part: feature:993603-993709:1:exon
so has part: feature:999169-999360:1:exon
so has part: feature:999821-1000034:1:exon
so has part: feature:1000856-1001067:1:exon
so has part: feature:1002070-1002177:1:exon
so has part: feature:1004168-1004344:1:exon
so has part: feature:1007788-1007968:1:exon
so has part: feature:1012880-1012905:1:exon

XP_038441880.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:964088-964280:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976790-976987:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:977623-977880:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:978346-978471:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:978962-979087:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:981787-981948:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:984914-985128:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:985478-985720:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:986281-986522:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:989875-990106:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:990972-991151:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:992003-992090:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:993603-993709:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:999169-999360:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:999821-1000034:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1000856-1001067:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1002070-1002177:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1004168-1004344:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1007788-1007968:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1012880-1012905:1:exon

LOC119868023
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119868023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(979970..982489)
location: region:979970-982489:-1
so has part: feature:979970-982489:-1:exon
subclass of: SO_0000011

119868023
type: Gene
SIO_000068: ncbigene

position:979970:-1
position: 979970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:982489:-1
position: 982489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979970-982489:-1:exon

LOC119868023
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119868023
product: uncharacterized LOC119868023
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385558.1
SIO_010081: LOC119868023
subclass of: SO_0000673
so part of: LOC119868023
location: complement(join(979970..980014,980650..980843,982262..982489))
location: region:979970-982489:-1
so has part: feature:982262-982489:-1:exon
so has part: feature:980650-980843:-1:exon
so has part: feature:979970-980014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:982262-982489:-1:exon

position:982262:-1
position: 982262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:980650-980843:-1:exon

position:980650:-1
position: 980650
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:980843:-1
position: 980843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:979970-980014:-1:exon

position:980014:-1
position: 980014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LAX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LAX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1026302..1035550
location: region:1026302-1035550:1
so has part: feature:1026302-1035550:1:exon
subclass of: SO_0000010

100684578
type: Gene
SIO_000068: ncbigene

position:1026302:1
position: 1026302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1035550:1
position: 1035550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026302-1035550:1:exon

LAX1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LAX1
product: lymphocyte transmembrane adaptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038585954.1
SIO_010081: LAX1
subclass of: SO_0000673
so part of: LAX1
location: join(1026302..1026543,1026768..1026946,1029877..1029989,1030418..1030528,1031307..1031392,1033162..1035550)
location: region:1026302-1035550:1
so has part: feature:1026302-1026543:1:exon
so has part: feature:1026768-1026946:1:exon
so has part: feature:1029877-1029989:1:exon
so has part: feature:1030418-1030528:1:exon
so has part: feature:1031307-1031392:1:exon
so has part: feature:1033162-1035550:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1026302-1026543:1:exon

position:1026543:1
position: 1026543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1026768-1026946:1:exon

position:1026768:1
position: 1026768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026946:1
position: 1026946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1029877-1029989:1:exon

position:1029877:1
position: 1029877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029989:1
position: 1029989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1030418-1030528:1:exon

position:1030418:1
position: 1030418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1030528:1
position: 1030528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1031307-1031392:1:exon

position:1031307:1
position: 1031307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1031392:1
position: 1031392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1033162-1035550:1:exon

position:1033162:1
position: 1033162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LAX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LAX1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lymphocyte transmembrane adapter 1
translation: MTMDGITPTISEIRGRILEARTLQVTAGSLDREKDQSRAIFSGFAGFLAVLLTTLIFYSLWNWNKWKKQRHIPYFRVTITPLLSLSRPRQGAKNIYDSLPQRQGELGRRQSRSNHIFSTESLLSRNYDSPPSDPVPSQAGNTLWLYRDHTHANSYAVGIYDNATGLQMCGDLTPSAHYVNVRAARDCLSISSEDSRDYINVPTAEEIAKALASTDSTPTSLFALPSAQELESTEEKDKGCGNASDHITFGSLRSESNDPLSDGEDSSETSNDYVNMAGLNLETIQGKQSCLVFQCYRDYENVPPAHTNGNQQQGEEEVTSSDTEGRMDGPGTHIQFVVKSGSFLALGEHVTCQPSAQSESSQMKHEEEMSNDTSSDYENVLAVKSEDRDSKQGPDT
SIO_010081: LAX1
subclass of: SO_0000673
so part of: LAX1
location: join(1026852..1026946,1029877..1029989,1030418..1030528,1031307..1031392,1033162..1033947)
location: region:1026852-1033947:1
so has part: feature:1026852-1026946:1:exon
so has part: feature:1029877-1029989:1:exon
so has part: feature:1030418-1030528:1:exon
so has part: feature:1031307-1031392:1:exon
so has part: feature:1033162-1033947:1:exon

XP_038441882.1
type: Protein
SIO_000068: ncbiprotein

position:1026852:1
position: 1026852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1033947:1
position: 1033947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1026852-1026946:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1029877-1029989:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1030418-1030528:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1031307-1031392:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1033162-1033947:1:exon

LOC100688224
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100688224
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1050635..1051327
location: region:1050635-1051327:1
so has part: feature:1050635-1051327:1:exon

100688224
type: Gene
SIO_000068: ncbigene

position:1050635:1
position: 1050635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1051327:1
position: 1051327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1050635-1051327:1:exon

LOC100688224
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100688224
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100688224
subclass of: SO_0000673
so part of: LOC100688224
location: 1050635..1051327
location: region:1050635-1051327:1
so has part: feature:1050635-1051327:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1050635-1051327:1:exon

ZC3H11A
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1057617..1103068
location: region:1057617-1103068:1
so has part: feature:1057617-1103068:1:exon
subclass of: SO_0000010

478932
type: Gene
SIO_000068: ncbigene

position:1057617:1
position: 1057617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1103068:1
position: 1103068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057617-1103068:1:exon

ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_038585957.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057617..1057775,1058295..1058342,1058441..1058592,1063622..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057617-1103068:1
so has part: feature:1057617-1057775:1:exon
so has part: feature:1058295-1058342:1:exon
so has part: feature:1058441-1058592:1:exon
so has part: feature:1063622-1065109:1:exon
so has part: feature:1074860-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1103068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057617-1057775:1:exon

position:1057775:1
position: 1057775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1058295-1058342:1:exon

position:1058295:1
position: 1058295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058342:1
position: 1058342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1058441-1058592:1:exon

position:1058441:1
position: 1058441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1058592:1
position: 1058592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1063622-1065109:1:exon

position:1063622:1
position: 1063622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1065109:1
position: 1065109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1074860-1075059:1:exon

position:1074860:1
position: 1074860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1075059:1
position: 1075059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1076183-1076302:1:exon

position:1076183:1
position: 1076183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1076302:1
position: 1076302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1084595-1084718:1:exon

position:1084595:1
position: 1084595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1084718:1
position: 1084718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1085788-1085991:1:exon

position:1085788:1
position: 1085788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1085991:1
position: 1085991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1086109-1086225:1:exon

position:1086109:1
position: 1086109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086225:1
position: 1086225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1086479-1086559:1:exon

position:1086479:1
position: 1086479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1086559:1
position: 1086559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1087767-1087877:1:exon

position:1087767:1
position: 1087767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1087877:1
position: 1087877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1088707-1088766:1:exon

position:1088707:1
position: 1088707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088766:1
position: 1088766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1089840-1089938:1:exon

position:1089840:1
position: 1089840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1089938:1
position: 1089938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1092422-1092490:1:exon

position:1092422:1
position: 1092422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1092490:1
position: 1092490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1095694-1096197:1:exon

position:1095694:1
position: 1095694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1096197:1
position: 1096197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1096971-1097050:1:exon

position:1096971:1
position: 1096971
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1097050:1
position: 1097050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1098371-1098701:1:exon

position:1098371:1
position: 1098371
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1098701:1
position: 1098701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1100033-1100199:1:exon

position:1100033:1
position: 1100033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100199:1
position: 1100199
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1100571-1100638:1:exon

position:1100571:1
position: 1100571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1100638:1
position: 1100638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1101084-1103068:1:exon

position:1101084:1
position: 1101084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585956.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057617..1057775,1058441..1058592,1063622..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057617-1103068:1
so has part: feature:1057617-1057775:1:exon
so has part: feature:1058441-1058592:1:exon
so has part: feature:1063622-1065109:1:exon
so has part: feature:1074860-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1103068:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1057617-1057775:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058441-1058592:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1063622-1065109:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1074860-1075059:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 9
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038585968.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057617..1057775,1058441..1058592,1063622..1063686,1065050..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057617-1103068:1
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position:1063686:1
position: 1063686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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position:1065050:1
position: 1065050
reference: sequence
type: ForwardStrandPosition
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_038585962.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057617..1057775,1058441..1058592,1063622..1063675,1064647..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057617-1103068:1
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position:1063675:1
position: 1063675
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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position:1064647:1
position: 1064647
reference: sequence
type: ForwardStrandPosition
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urn:…
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585966.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057617..1057775,1058441..1058592,1063622..1063675,1065050..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057617-1103068:1
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SIO_000300: 17
SIO_000628: feature:1098371-1098701:1:exon

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SIO_000300: 18
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1101084-1103068:1:exon

ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_038585969.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057617..1057775,1063622..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057617-1103068:1
so has part: feature:1057617-1057775:1:exon
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urn:…
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038585965.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057617..1057775,1063622..1063686,1065050..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057617-1103068:1
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urn:…
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038585961.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
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location: region:1057617-1103068:1
so has part: feature:1057617-1057775:1:exon
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038585964.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
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location: region:1057617-1103068:1
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_038585960.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
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location: region:1057635-1103068:1
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position:1057635:1
position: 1057635
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type: ForwardStrandPosition
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038585963.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057635..1057756,1063622..1063675,1064647..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_038585967.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585958.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
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ZC3H11A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZC3H11A
product: zinc finger CCCH-type containing 11A, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XM_038585959.1
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1057654..1057756,1058295..1058342,1058441..1058592,1063622..1065109,1074860..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1103068)
location: region:1057654-1103068:1
so has part: feature:1057654-1057756:1:exon
so has part: feature:1058295-1058342:1:exon
so has part: feature:1058441-1058592:1:exon
so has part: feature:1063622-1065109:1:exon
so has part: feature:1074860-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1103068:1:exon

position:1057654:1
position: 1057654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1057654-1057756:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1058295-1058342:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1058441-1058592:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1063622-1065109:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1074860-1075059:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1101084-1103068:1:exon

ZBED6
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: ZBED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1058599..1063615
location: region:1058599-1063615:1
so has part: feature:1058599-1063615:1:exon
subclass of: SO_0000010

100682640
type: Gene
SIO_000068: ncbigene

position:1058599:1
position: 1058599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1063615:1
position: 1063615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1058599-1063615:1:exon

ZBED6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ZBED6
product: zinc finger BED-type containing 6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038585955.1
SIO_010081: ZBED6
subclass of: SO_0000673
so part of: ZBED6
location: 1058599..1063615
location: region:1058599-1063615:1
so has part: feature:1058599-1063615:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1058599-1063615:1:exon

ZBED6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZBED6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger BED domain-containing protein 6
translation: MSVCTLSVPVSSLSPGRRCNTFSDAGILGCVPIDANTDEEDVVEGKMVAEGMDKEAKLPAKKKRKKGLRIKGKRRRKKLILAKKFSKDLGSGRPVADAPALLASSAHEQDEEGLFESNIEKQIYLPSTRAKTSIVWHFFHVDPQYTWRAICNLCEKSVSRGKPGSHLGTSTLQRHLQARHSPHWTRANKFGVTSGEEDFTLDVPLSPSSAGSNGSFEYMSTDPLDENRMGKKRDKSVSDALRAERGRFLIKSNIVKHALIPGTRAKTSAVWNFFYTDPQHISRAVCNICKRSVSRGRPGSHLGTSTLQRHLQATHPIHWAVANKDSGAVGNGLDEAETERNDLLSDPLHGEKSTGSHDLTAEDLSDSDSDEPPVLEVENSRRSESPIPVAEQDTLTHAQEGETTYSENSVSSQISQAIIQMIVEDMHPYNYFSTPAFQRFMQIVAPDYRLPSETYFFTKAVPQLYDWVREKIFLTLENVQSQKIHLTVDIWTHDPSTDYFIVTVHWVSLETAPSSSNGRIPNFRKWAVLCVTGLAKDCLITNILQELNDQIGLWLSPNFLIPSFIVSDNSSNVVHAIKDGGFTHVPCFLHCLNIVIQDFFCEHKSIENMLVAARKTCHHFSHSVKARQILQEFQNDHQLPWKNLKQDETGHWISTFYMLKWLLEHCYSVHHSLGRASGVVLTSLQWTLMTYVCDILKPFEEATQKVSVKTTGLNQVLPLIHHLLLSLQKLREDFQIRGITQALNLVDSLSLKLETDTLLSAMLKSKPCVLAALLDPCFKNSLEDFFPQGADLETYKQILAEEVCNYMESSEVCHIATSDAAGPSAIVGADSFTSSIREGASSSGSFDSSAADNVAVGSKSFMFPSAIAVVDEYFKEKYSEISGGGDPLIYWQRKVSIWPALTQVAIQYLSCPMCSWQSECIFTANSQFHPKQIMSLDFDNIEQLMFLKMNLKNVNYDYSTLVLSWDPGNEVIQSNEKEILQ
SIO_010081: ZBED6
subclass of: SO_0000673
so part of: ZBED6
location: 1059529..1062474
location: region:1059529-1062474:1
so has part: feature:1059529-1062474:1:exon

XP_038441883.1
type: Protein
SIO_000068: ncbiprotein

position:1059529:1
position: 1059529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1062474:1
position: 1062474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1059529-1062474:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441884.1
type: Protein
SIO_000068: ncbiprotein

position:1075006:1
position: 1075006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1101342:1
position: 1101342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441893.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X1
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKVHVSKSLKERLGMSAGPNSEEAAERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1092422..1092490,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1092422-1092490:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441896.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1092422-1092490:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1101084-1101342:1:exon

ZC3H11A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ZC3H11A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger CCCH domain-containing protein 11A isoform X2
translation: MPNQGEDCYFFFYSTCTKGDSCPFRHCEAALGNETVCTLWQEGRCFRQVCRFRHMEIDKKRSEIPCYWENQPMGCQKLNCAFHHNRGRYVDGLFLPPSKTVLPTVPESPEEEVKANQLTVQQNKLSVQSNPSPQLRSVMKVESSENVPSPTHPPVVINAADDDEDDDDQFSEEGDETKTPILQPPPEVHNGLRTASARKPGVNLKQGECLNFGIKTLEEIKSKKMKEKSKKQGEGSSGVSSLLLQPQPIPGPEKENVRTVVRTVTLSSKQGEEPLVRLSLTERLGKRKFSGGDSDPPLKRSLAQRLGKKVEATETNTDKAPKKERVTKVGEIHVKTLEEILLEKASQKRGELQPKLKTEGPSKVDDSTLGTRSPSTIRIKTFSEVLAEKKHRQQEAERQKSKKDVTCIKLKTDSDIKKTVVLPPIATSKGQSEEPTGRTKSMQDVHIKTLEEIKQEKALRGQQGTESSTSSQPQPEAIPGPRRLLRITKKTGIKEEKKLQEGSEVASQSSVARTEAKETSEETTGVGITKIQVKRCETMREKHIQKQPERGTSQKEKSVLTPLRGDVDSCNTQIAEKPVLTTMPGITRHLTKRPPTKSSQKAEVETSGIGDSILNVKCAAQTLEKRGKAKPKVNVKPSVVKVVSSPKLAPKRKAVEVHPAVIAAVKPLSSSSMLQESPTKKTAVAVVPLLSEDKSVTLPEMEKPRDSHVLPPTQSSSDSSPQEVSGPSSSQIATKTRRLSSTSTGKPPLSVEDDFEKLIWEISGGKLEAEIDLDPGKDEDDLLLELSEMIDS
SIO_010081: ZC3H11A
subclass of: SO_0000673
so part of: ZC3H11A
location: join(1075006..1075059,1076183..1076302,1084595..1084718,1085788..1085991,1086109..1086225,1086479..1086559,1087767..1087877,1088707..1088766,1089840..1089938,1095694..1096197,1096971..1097050,1098371..1098701,1100033..1100199,1100571..1100638,1101084..1101342)
location: region:1075006-1101342:1
so has part: feature:1075006-1075059:1:exon
so has part: feature:1076183-1076302:1:exon
so has part: feature:1084595-1084718:1:exon
so has part: feature:1085788-1085991:1:exon
so has part: feature:1086109-1086225:1:exon
so has part: feature:1086479-1086559:1:exon
so has part: feature:1087767-1087877:1:exon
so has part: feature:1088707-1088766:1:exon
so has part: feature:1089840-1089938:1:exon
so has part: feature:1095694-1096197:1:exon
so has part: feature:1096971-1097050:1:exon
so has part: feature:1098371-1098701:1:exon
so has part: feature:1100033-1100199:1:exon
so has part: feature:1100571-1100638:1:exon
so has part: feature:1101084-1101342:1:exon

XP_038441897.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1075006-1075059:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1076183-1076302:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084595-1084718:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1085788-1085991:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1086109-1086225:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086479-1086559:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1087767-1087877:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1088707-1088766:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1089840-1089938:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1095694-1096197:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1096971-1097050:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1098371-1098701:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1100033-1100199:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1100571-1100638:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1101084-1101342:1:exon

LOC606833
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC606833
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1108456..1108958)
location: region:1108456-1108958:-1
so has part: feature:1108456-1108958:-1:exon

606833
type: Gene
SIO_000068: ncbigene

position:1108456:-1
position: 1108456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108958:-1
position: 1108958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108456-1108958:-1:exon

SNRPE
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: SNRPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1112955..1118678
location: region:1112955-1118678:1
so has part: feature:1112955-1118678:1:exon
subclass of: SO_0000010

100855941
type: Gene
SIO_000068: ncbigene

position:1112955:1
position: 1112955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118678:1
position: 1118678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112955-1118678:1:exon

SNRPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SNRPE
product: small nuclear ribonucleoprotein polypeptide E, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038585971.1
SIO_010081: SNRPE
subclass of: SO_0000673
so part of: SNRPE
location: join(1112955..1113090,1113494..1113520,1115266..1115328,1116517..1116595,1118455..1118678)
location: region:1112955-1118678:1
so has part: feature:1112955-1113090:1:exon
so has part: feature:1113494-1113520:1:exon
so has part: feature:1115266-1115328:1:exon
so has part: feature:1116517-1116595:1:exon
so has part: feature:1118455-1118678:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1112955-1113090:1:exon

position:1113090:1
position: 1113090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1113494-1113520:1:exon

position:1113494:1
position: 1113494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113520:1
position: 1113520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1115266-1115328:1:exon

position:1115266:1
position: 1115266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1115328:1
position: 1115328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1116517-1116595:1:exon

position:1116517:1
position: 1116517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116595:1
position: 1116595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1118455-1118678:1:exon

position:1118455:1
position: 1118455
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNRPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SNRPE
product: small nuclear ribonucleoprotein polypeptide E, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038585972.1
SIO_010081: SNRPE
subclass of: SO_0000673
so part of: SNRPE
location: join(1112980..1113072,1115266..1115328,1116517..1116595,1118455..1118678)
location: region:1112980-1118678:1
so has part: feature:1112980-1113072:1:exon
so has part: feature:1115266-1115328:1:exon
so has part: feature:1116517-1116595:1:exon
so has part: feature:1118455-1118678:1:exon

position:1112980:1
position: 1112980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1112980-1113072:1:exon

position:1113072:1
position: 1113072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1115266-1115328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116517-1116595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118455-1118678:1:exon

SNRPE
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SNRPE
product: small nuclear ribonucleoprotein polypeptide E, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_038585970.1
SIO_010081: SNRPE
subclass of: SO_0000673
so part of: SNRPE
location: join(1113022..1113072,1113450..1113524,1115266..1115328,1116517..1116595,1118455..1118678)
location: region:1113022-1118678:1
so has part: feature:1113022-1113072:1:exon
so has part: feature:1113450-1113524:1:exon
so has part: feature:1115266-1115328:1:exon
so has part: feature:1116517-1116595:1:exon
so has part: feature:1118455-1118678:1:exon

position:1113022:1
position: 1113022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113022-1113072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1113450-1113524:1:exon

position:1113450:1
position: 1113450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1113524:1
position: 1113524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1115266-1115328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116517-1116595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118455-1118678:1:exon

SNRPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SNRPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein E isoform X2
translation: MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
SIO_010081: SNRPE
subclass of: SO_0000673
so part of: SNRPE
location: join(1113037..1113090,1113494..1113520,1115266..1115328,1116517..1116595,1118455..1118510)
location: region:1113037-1118510:1
so has part: feature:1113037-1113090:1:exon
so has part: feature:1113494-1113520:1:exon
so has part: feature:1115266-1115328:1:exon
so has part: feature:1116517-1116595:1:exon
so has part: feature:1118455-1118510:1:exon

XP_038441899.1
type: Protein
SIO_000068: ncbiprotein

position:1113037:1
position: 1113037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1118510:1
position: 1118510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1113037-1113090:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1113494-1113520:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115266-1115328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116517-1116595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118455-1118510:1:exon

SNRPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SNRPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein E isoform X1
translation: MAYRGQGQKVQKAGRLCLCFFLNRCRRTSSSDTCKTYRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
SIO_010081: SNRPE
subclass of: SO_0000673
so part of: SNRPE
location: join(1113037..1113072,1113450..1113524,1115266..1115328,1116517..1116595,1118455..1118510)
location: region:1113037-1118510:1
so has part: feature:1113037-1113072:1:exon
so has part: feature:1113450-1113524:1:exon
so has part: feature:1115266-1115328:1:exon
so has part: feature:1116517-1116595:1:exon
so has part: feature:1118455-1118510:1:exon

XP_038441898.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1113037-1113072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1113450-1113524:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1115266-1115328:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1116517-1116595:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1118455-1118510:1:exon

SNRPE
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SNRPE
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: small nuclear ribonucleoprotein E isoform X3
translation: MAYRGQGQKVQKRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
SIO_010081: SNRPE
subclass of: SO_0000673
so part of: SNRPE
location: join(1113037..1113072,1115266..1115328,1116517..1116595,1118455..1118510)
location: region:1113037-1118510:1
so has part: feature:1113037-1113072:1:exon
so has part: feature:1115266-1115328:1:exon
so has part: feature:1116517-1116595:1:exon
so has part: feature:1118455-1118510:1:exon

XP_038441900.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1113037-1113072:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1115266-1115328:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1116517-1116595:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1118455-1118510:1:exon

LOC119868024
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119868024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1120034..1121483
location: region:1120034-1121483:1
so has part: feature:1120034-1121483:1:exon
subclass of: SO_0000011

119868024
type: Gene
SIO_000068: ncbigene

position:1120034:1
position: 1120034
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1121483:1
position: 1121483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1120034-1121483:1:exon

LOC119868024
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119868024
product: uncharacterized LOC119868024
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005385559.1
SIO_010081: LOC119868024
subclass of: SO_0000673
so part of: LOC119868024
location: join(1120034..1120637,1120783..1120855,1121426..1121483)
location: region:1120034-1121483:1
so has part: feature:1120034-1120637:1:exon
so has part: feature:1120783-1120855:1:exon
so has part: feature:1121426-1121483:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1120034-1120637:1:exon

position:1120637:1
position: 1120637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1120783-1120855:1:exon

position:1120783:1
position: 1120783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120855:1
position: 1120855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1121426-1121483:1:exon

position:1121426:1
position: 1121426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100856063
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100856063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1171276..1171634)
location: region:1171276-1171634:-1
so has part: feature:1171276-1171634:-1:exon

100856063
type: Gene
SIO_000068: ncbigene

position:1171276:-1
position: 1171276
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1171634:-1
position: 1171634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1171276-1171634:-1:exon

LOC100856063
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100856063
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 Proteins
pseudo: true
SIO_010081: LOC100856063
subclass of: SO_0000673
so part of: LOC100856063
location: complement(1171276..1171634)
location: region:1171276-1171634:-1
so has part: feature:1171276-1171634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1171276-1171634:-1:exon

LOC111094581
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1173794..1174963
location: region:1173794-1174963:1
so has part: feature:1173794-1174963:1:exon
subclass of: SO_0000010

111094581
type: Gene
SIO_000068: ncbigene

position:1173794:1
position: 1173794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174963:1
position: 1174963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173794-1174963:1:exon

LOC111094581
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC111094581
product: 60S ribosomal protein L39-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038585974.1
SIO_010081: LOC111094581
subclass of: SO_0000673
so part of: LOC111094581
location: 1173794..1174963
location: region:1173794-1174963:1
so has part: feature:1173794-1174963:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1173794-1174963:1:exon

LOC111094581
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC111094581
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 60S ribosomal protein L39-like
translation: MWLTVIAISSHKTFRIKRFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWRRTKLGL
SIO_010081: LOC111094581
subclass of: SO_0000673
so part of: LOC111094581
location: 1174388..1174564
location: region:1174388-1174564:1
so has part: feature:1174388-1174564:1:exon

XP_038441902.1
type: Protein
SIO_000068: ncbiprotein

position:1174388:1
position: 1174388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174564:1
position: 1174564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174388-1174564:1:exon

SOX13
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: SOX13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1286221..1304778
location: region:1286221-1304778:1
so has part: feature:1286221-1304778:1:exon
subclass of: SO_0000010

488562
type: Gene
SIO_000068: ncbigene

position:1286221:1
position: 1286221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304778:1
position: 1304778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286221-1304778:1:exon

SOX13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SOX13
product: SRY-box transcription factor 13, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038585977.1
SIO_010081: SOX13
subclass of: SO_0000673
so part of: SOX13
location: join(1286221..1286553,1292631..1292829,1293944..1294055,1294344..1294430,1295616..1295788,1296108..1296176,1296541..1296655,1299049..1299134,1299344..1299506,1299887..1299996,1300168..1300264,1300510..1300653,1301869..1302085,1303012..1303288)
location: region:1286221-1303288:1
so has part: feature:1286221-1286553:1:exon
so has part: feature:1292631-1292829:1:exon
so has part: feature:1293944-1294055:1:exon
so has part: feature:1294344-1294430:1:exon
so has part: feature:1295616-1295788:1:exon
so has part: feature:1296108-1296176:1:exon
so has part: feature:1296541-1296655:1:exon
so has part: feature:1299049-1299134:1:exon
so has part: feature:1299344-1299506:1:exon
so has part: feature:1299887-1299996:1:exon
so has part: feature:1300168-1300264:1:exon
so has part: feature:1300510-1300653:1:exon
so has part: feature:1301869-1302085:1:exon
so has part: feature:1303012-1303288:1:exon

position:1303288:1
position: 1303288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286221-1286553:1:exon

position:1286553:1
position: 1286553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1292631-1292829:1:exon

position:1292631:1
position: 1292631
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1292829:1
position: 1292829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293944-1294055:1:exon

position:1293944:1
position: 1293944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294055:1
position: 1294055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1294344-1294430:1:exon

position:1294344:1
position: 1294344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294430:1
position: 1294430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1295616-1295788:1:exon

position:1295616:1
position: 1295616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295788:1
position: 1295788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1296108-1296176:1:exon

position:1296108:1
position: 1296108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296176:1
position: 1296176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1296541-1296655:1:exon

position:1296541:1
position: 1296541
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296655:1
position: 1296655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1299049-1299134:1:exon

position:1299049:1
position: 1299049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299134:1
position: 1299134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1299344-1299506:1:exon

position:1299344:1
position: 1299344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299506:1
position: 1299506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1299887-1299996:1:exon

position:1299887:1
position: 1299887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299996:1
position: 1299996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1300168-1300264:1:exon

position:1300168:1
position: 1300168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300264:1
position: 1300264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1300510-1300653:1:exon

position:1300510:1
position: 1300510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300653:1
position: 1300653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1301869-1302085:1:exon

position:1301869:1
position: 1301869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1302085:1
position: 1302085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1303012-1303288:1:exon

position:1303012:1
position: 1303012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOX13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SOX13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-13 isoform X3
translation: MLRMSMRSPGSALLAPDGVGTMVNCTVKSEGKKEPCHEALQGSAAGAEPQLGDPARAPQDGADPQAPAQDCSSPESNGSPEPKRPGGSEAASGSQEKLDFNQNLKEVVPAIEKLLSSDWKERFLGRSSVEAKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLPLLHSPPAPVVKRPGAMAAHPPLQEPSQPLNLTAKPKAPELPNASSSPSLKMNNCGTRPPSHGAPTRDLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGHGGALESSPNAPFRKDLISLDTSPAKERLEEGCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQMSSSDVLYPRVAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEATEDRHSVAEGELYRYSEDEDSEGEEKSDGELVVLTD
SIO_010081: SOX13
subclass of: SO_0000673
so part of: SOX13
location: join(1286546..1286553,1292631..1292829,1293944..1294055,1294344..1294430,1295616..1295788,1296108..1296176,1296541..1296655,1299049..1299134,1299344..1299506,1299887..1299996,1300168..1300264,1300510..1300653,1301869..1302085,1303012..1303288)
location: region:1286546-1303288:1
so has part: feature:1286546-1286553:1:exon
so has part: feature:1292631-1292829:1:exon
so has part: feature:1293944-1294055:1:exon
so has part: feature:1294344-1294430:1:exon
so has part: feature:1295616-1295788:1:exon
so has part: feature:1296108-1296176:1:exon
so has part: feature:1296541-1296655:1:exon
so has part: feature:1299049-1299134:1:exon
so has part: feature:1299344-1299506:1:exon
so has part: feature:1299887-1299996:1:exon
so has part: feature:1300168-1300264:1:exon
so has part: feature:1300510-1300653:1:exon
so has part: feature:1301869-1302085:1:exon
so has part: feature:1303012-1303288:1:exon

XP_038441905.1
type: Protein
SIO_000068: ncbiprotein

position:1286546:1
position: 1286546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1286546-1286553:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1292631-1292829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1293944-1294055:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1294344-1294430:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1295616-1295788:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1296108-1296176:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1296541-1296655:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299049-1299134:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1299344-1299506:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1299887-1299996:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300168-1300264:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1300510-1300653:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1301869-1302085:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1303012-1303288:1:exon

SOX13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SOX13
product: SRY-box transcription factor 13, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585975.1
SIO_010081: SOX13
subclass of: SO_0000673
so part of: SOX13
location: join(1292631..1292829,1293944..1294055,1294344..1294430,1295616..1295788,1296108..1296176,1296541..1296655,1299049..1299134,1299344..1299506,1299887..1299996,1300168..1300264,1300510..1300653,1301869..1302085,1303012..1304778)
location: region:1292631-1304778:1
so has part: feature:1292631-1292829:1:exon
so has part: feature:1293944-1294055:1:exon
so has part: feature:1294344-1294430:1:exon
so has part: feature:1295616-1295788:1:exon
so has part: feature:1296108-1296176:1:exon
so has part: feature:1296541-1296655:1:exon
so has part: feature:1299049-1299134:1:exon
so has part: feature:1299344-1299506:1:exon
so has part: feature:1299887-1299996:1:exon
so has part: feature:1300168-1300264:1:exon
so has part: feature:1300510-1300653:1:exon
so has part: feature:1301869-1302085:1:exon
so has part: feature:1303012-1304778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292631-1292829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293944-1294055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294344-1294430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1295616-1295788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1296108-1296176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1296541-1296655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299049-1299134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299344-1299506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1299887-1299996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300168-1300264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300510-1300653:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1301869-1302085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1303012-1304778:1:exon

SOX13
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SOX13
product: SRY-box transcription factor 13, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585976.1
SIO_010081: SOX13
subclass of: SO_0000673
so part of: SOX13
location: join(1292631..1292829,1293944..1294055,1294344..1294430,1295616..1295788,1296108..1296176,1296544..1296655,1299049..1299134,1299344..1299506,1299887..1299996,1300168..1300264,1300510..1300653,1301869..1302085,1303012..1304778)
location: region:1292631-1304778:1
so has part: feature:1292631-1292829:1:exon
so has part: feature:1293944-1294055:1:exon
so has part: feature:1294344-1294430:1:exon
so has part: feature:1295616-1295788:1:exon
so has part: feature:1296108-1296176:1:exon
so has part: feature:1296544-1296655:1:exon
so has part: feature:1299049-1299134:1:exon
so has part: feature:1299344-1299506:1:exon
so has part: feature:1299887-1299996:1:exon
so has part: feature:1300168-1300264:1:exon
so has part: feature:1300510-1300653:1:exon
so has part: feature:1301869-1302085:1:exon
so has part: feature:1303012-1304778:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1292631-1292829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293944-1294055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294344-1294430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1295616-1295788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1296108-1296176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1296544-1296655:1:exon

position:1296544:1
position: 1296544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1299049-1299134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299344-1299506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1299887-1299996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300168-1300264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300510-1300653:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1301869-1302085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1303012-1304778:1:exon

SOX13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SOX13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-13 isoform X1
translation: MSMRSPGSALLAPDGVGTMVNCTVKSEGKKEPCHEALQGSAAGAEPQLGDPARAPQDGADPQAPAQDCSSPESNGSPEPKRPGGSEAASGSQEKLDFNQNLKEVVPAIEKLLSSDWKERFLGRSSVEAKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLPLLHSPPAPVVKRPGAMAAHPPLQEPSQPLNLTAKPKAPELPNASSSPSLKMNNCGTRPPSHGAPTRDLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGHGGALESSPNAPFRKDLISLDTSPAKERLEEGCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQMSSSDVLYPRVAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEATEDRHSVAEGELYRYSEDEDSEGEEKSDGELVVLTD
SIO_010081: SOX13
subclass of: SO_0000673
so part of: SOX13
location: join(1292632..1292829,1293944..1294055,1294344..1294430,1295616..1295788,1296108..1296176,1296541..1296655,1299049..1299134,1299344..1299506,1299887..1299996,1300168..1300264,1300510..1300653,1301869..1302085,1303012..1303288)
location: region:1292632-1303288:1
so has part: feature:1292632-1292829:1:exon
so has part: feature:1293944-1294055:1:exon
so has part: feature:1294344-1294430:1:exon
so has part: feature:1295616-1295788:1:exon
so has part: feature:1296108-1296176:1:exon
so has part: feature:1296541-1296655:1:exon
so has part: feature:1299049-1299134:1:exon
so has part: feature:1299344-1299506:1:exon
so has part: feature:1299887-1299996:1:exon
so has part: feature:1300168-1300264:1:exon
so has part: feature:1300510-1300653:1:exon
so has part: feature:1301869-1302085:1:exon
so has part: feature:1303012-1303288:1:exon

XP_038441903.1
type: Protein
SIO_000068: ncbiprotein

position:1292632:1
position: 1292632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1292632-1292829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293944-1294055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294344-1294430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1295616-1295788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1296108-1296176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1296541-1296655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299049-1299134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299344-1299506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1299887-1299996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300168-1300264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300510-1300653:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1301869-1302085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1303012-1303288:1:exon

SOX13
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SOX13
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription factor SOX-13 isoform X2
translation: MSMRSPGSALLAPDGVGTMVNCTVKSEGKKEPCHEALQGSAAGAEPQLGDPARAPQDGADPQAPAQDCSSPESNGSPEPKRPGGSEAASGSQEKLDFNQNLKEVVPAIEKLLSSDWKERFLGRSSVEAKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLPLLHSPPAPVVKRPGAMAAHPPLQEPSQPLNLTAKPKAPELPNASSSPSLKMNNCGTRPPSHGAPTRDLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGHGGALESSPNAPFRKDLISLDTSPAKERLEEGCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQMSSSDVLYPRVAGMPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEATEDRHSVAEGELYRYSEDEDSEGEEKSDGELVVLTD
SIO_010081: SOX13
subclass of: SO_0000673
so part of: SOX13
location: join(1292632..1292829,1293944..1294055,1294344..1294430,1295616..1295788,1296108..1296176,1296544..1296655,1299049..1299134,1299344..1299506,1299887..1299996,1300168..1300264,1300510..1300653,1301869..1302085,1303012..1303288)
location: region:1292632-1303288:1
so has part: feature:1292632-1292829:1:exon
so has part: feature:1293944-1294055:1:exon
so has part: feature:1294344-1294430:1:exon
so has part: feature:1295616-1295788:1:exon
so has part: feature:1296108-1296176:1:exon
so has part: feature:1296544-1296655:1:exon
so has part: feature:1299049-1299134:1:exon
so has part: feature:1299344-1299506:1:exon
so has part: feature:1299887-1299996:1:exon
so has part: feature:1300168-1300264:1:exon
so has part: feature:1300510-1300653:1:exon
so has part: feature:1301869-1302085:1:exon
so has part: feature:1303012-1303288:1:exon

XP_038441904.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1292632-1292829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1293944-1294055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294344-1294430:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1295616-1295788:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1296108-1296176:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1296544-1296655:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1299049-1299134:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299344-1299506:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1299887-1299996:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300168-1300264:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300510-1300653:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1301869-1302085:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1303012-1303288:1:exon

ETNK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: ETNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1304799..1325771)
location: region:1304799-1325771:-1
so has part: feature:1304799-1325771:-1:exon
subclass of: SO_0000010

478935
type: Gene
SIO_000068: ncbigene

position:1304799:-1
position: 1304799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1325771:-1
position: 1325771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1304799-1325771:-1:exon

ETNK2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: ETNK2
product: ethanolamine kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XR_005385561.1
SIO_010081: ETNK2
so part of: ETNK2
location: complement(join(1304799..1305068,1306720..1306822,1308655..1308834,1310410..1310483,1312013..1312158,1315036..1315119,1315708..1315850,1320271..1320393,1323596..1323855,1325514..1325771))
location: region:1304799-1325771:-1
so has part: feature:1325514-1325771:-1:exon
so has part: feature:1323596-1323855:-1:exon
so has part: feature:1320271-1320393:-1:exon
so has part: feature:1315708-1315850:-1:exon
so has part: feature:1315036-1315119:-1:exon
so has part: feature:1312013-1312158:-1:exon
so has part: feature:1310410-1310483:-1:exon
so has part: feature:1308655-1308834:-1:exon
so has part: feature:1306720-1306822:-1:exon
so has part: feature:1304799-1305068:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1325514-1325771:-1:exon

position:1325514:-1
position: 1325514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1323596-1323855:-1:exon

position:1323596:-1
position: 1323596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1323855:-1
position: 1323855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1320271-1320393:-1:exon

position:1320271:-1
position: 1320271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1320393:-1
position: 1320393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1315708-1315850:-1:exon

position:1315708:-1
position: 1315708
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315850:-1
position: 1315850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1315036-1315119:-1:exon

position:1315036:-1
position: 1315036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1315119:-1
position: 1315119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1312013-1312158:-1:exon

position:1312013:-1
position: 1312013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1312158:-1
position: 1312158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1310410-1310483:-1:exon

position:1310410:-1
position: 1310410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1310483:-1
position: 1310483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1308655-1308834:-1:exon

position:1308655:-1
position: 1308655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1308834:-1
position: 1308834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1306720-1306822:-1:exon

position:1306720:-1
position: 1306720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1306822:-1
position: 1306822
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1304799-1305068:-1:exon

position:1305068:-1
position: 1305068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ETNK2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: ETNK2
product: ethanolamine kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_005385560.1
SIO_010081: ETNK2
so part of: ETNK2
location: complement(join(1305932..1306822,1308655..1308834,1310410..1310483,1312013..1312158,1315036..1315119,1315708..1315850,1320271..1320393,1323596..1323855,1325514..1325771))
location: region:1305932-1325771:-1
so has part: feature:1325514-1325771:-1:exon
so has part: feature:1323596-1323855:-1:exon
so has part: feature:1320271-1320393:-1:exon
so has part: feature:1315708-1315850:-1:exon
so has part: feature:1315036-1315119:-1:exon
so has part: feature:1312013-1312158:-1:exon
so has part: feature:1310410-1310483:-1:exon
so has part: feature:1308655-1308834:-1:exon
so has part: feature:1305932-1306822:-1:exon

position:1305932:-1
position: 1305932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325514-1325771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323596-1323855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1320271-1320393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315708-1315850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315036-1315119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1312013-1312158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1310410-1310483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308655-1308834:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305932-1306822:-1:exon

ETNK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ETNK2
product: ethanolamine kinase 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038585979.1
SIO_010081: ETNK2
subclass of: SO_0000673
so part of: ETNK2
location: complement(join(1307617..1308834,1310410..1310483,1312013..1312158,1315036..1315119,1315708..1315850,1323596..1323855,1325514..1325771))
location: region:1307617-1325771:-1
so has part: feature:1325514-1325771:-1:exon
so has part: feature:1323596-1323855:-1:exon
so has part: feature:1315708-1315850:-1:exon
so has part: feature:1315036-1315119:-1:exon
so has part: feature:1312013-1312158:-1:exon
so has part: feature:1310410-1310483:-1:exon
so has part: feature:1307617-1308834:-1:exon

position:1307617:-1
position: 1307617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325514-1325771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323596-1323855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315708-1315850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315036-1315119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312013-1312158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1310410-1310483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1307617-1308834:-1:exon

ETNK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ETNK2
product: ethanolamine kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038585978.1
SIO_010081: ETNK2
subclass of: SO_0000673
so part of: ETNK2
location: complement(join(1307617..1308834,1310410..1310483,1312013..1312158,1315036..1315119,1315708..1315850,1320271..1320393,1323596..1323855,1325514..1325771))
location: region:1307617-1325771:-1
so has part: feature:1325514-1325771:-1:exon
so has part: feature:1323596-1323855:-1:exon
so has part: feature:1320271-1320393:-1:exon
so has part: feature:1315708-1315850:-1:exon
so has part: feature:1315036-1315119:-1:exon
so has part: feature:1312013-1312158:-1:exon
so has part: feature:1310410-1310483:-1:exon
so has part: feature:1307617-1308834:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1325514-1325771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323596-1323855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1320271-1320393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315708-1315850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315036-1315119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1312013-1312158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1310410-1310483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1307617-1308834:-1:exon

ETNK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ETNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethanolamine kinase 2 isoform X2
translation: MAVPPSAAPPRSPLYLRRPAPRPQSSWGMEERAAAGAGCREPPGAPRAAAVPCFGLSVDQDDILPGALRLIRELRPHWKPEQVRTKRFTDGITNKLVACYVEEDMQDCVLVRVYGERTELLVDRENEVRNFQLLRAHGCAPKLYCTFQNGLCYEYMRGMALGPEHIREPRLFSLSADVPKVEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYCWYPGRDTQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASHFFWALWALIQNQFSTIEFDFLRYAVIRFHQYFKVKPQVSALEMPK
SIO_010081: ETNK2
subclass of: SO_0000673
so part of: ETNK2
location: complement(join(1308762..1308834,1310410..1310483,1312013..1312158,1315036..1315119,1315708..1315850,1323596..1323855,1325514..1325771))
location: region:1308762-1325771:-1
so has part: feature:1325514-1325771:-1:exon
so has part: feature:1323596-1323855:-1:exon
so has part: feature:1315708-1315850:-1:exon
so has part: feature:1315036-1315119:-1:exon
so has part: feature:1312013-1312158:-1:exon
so has part: feature:1310410-1310483:-1:exon
so has part: feature:1308762-1308834:-1:exon

XP_038441907.1
type: Protein
SIO_000068: ncbiprotein

position:1308762:-1
position: 1308762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325514-1325771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323596-1323855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1315708-1315850:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315036-1315119:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312013-1312158:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1310410-1310483:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1308762-1308834:-1:exon

ETNK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ETNK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ethanolamine kinase 2 isoform X1
translation: MAVPPSAAPPRSPLYLRRPAPRPQSSWGMEERAAAGAGCREPPGAPRAAAVPCFGLSVDQDDILPGALRLIRELRPHWKPEQVRTKRFTDGITNKLVACYVEEDMQDCVLVRVYGERTELLVDRENEVRNFQLLRAHGCAPKLYCTFQNGLCYEYMRGMALGPEHIREPRLFRLIALEMAKIHTIHANGSLPKPTLWHKMHNYFTLVKNEINPSLSADVPKVEVLEQELAWLKEHLSQLDSPVVFCHNDLLCKNIIYDSTKGHVRFIDYEYAGYNYQAFDIGNHFNEFAGVNEVDYCWYPGRDTQLQWLRYYLQAQKGMAVTPREVERLYVQVNKFALASHFFWALWALIQNQFSTIEFDFLRYAVIRFHQYFKVKPQVSALEMPK
SIO_010081: ETNK2
subclass of: SO_0000673
so part of: ETNK2
location: complement(join(1308762..1308834,1310410..1310483,1312013..1312158,1315036..1315119,1315708..1315850,1320271..1320393,1323596..1323855,1325514..1325771))
location: region:1308762-1325771:-1
so has part: feature:1325514-1325771:-1:exon
so has part: feature:1323596-1323855:-1:exon
so has part: feature:1320271-1320393:-1:exon
so has part: feature:1315708-1315850:-1:exon
so has part: feature:1315036-1315119:-1:exon
so has part: feature:1312013-1312158:-1:exon
so has part: feature:1310410-1310483:-1:exon
so has part: feature:1308762-1308834:-1:exon

XP_038441906.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1325514-1325771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323596-1323855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1320271-1320393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315708-1315850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315036-1315119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1312013-1312158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1310410-1310483:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1308762-1308834:-1:exon

ETNK2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: ETNK2
product: ethanolamine kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XR_005385562.1
SIO_010081: ETNK2
so part of: ETNK2
location: complement(join(1308768..1308834,1310410..1310483,1311574..1311644,1312013..1312158,1315036..1315119,1315708..1315850,1320271..1320393,1323596..1323855,1325514..1325771))
location: region:1308768-1325771:-1
so has part: feature:1325514-1325771:-1:exon
so has part: feature:1323596-1323855:-1:exon
so has part: feature:1320271-1320393:-1:exon
so has part: feature:1315708-1315850:-1:exon
so has part: feature:1315036-1315119:-1:exon
so has part: feature:1312013-1312158:-1:exon
so has part: feature:1311574-1311644:-1:exon
so has part: feature:1310410-1310483:-1:exon
so has part: feature:1308768-1308834:-1:exon

position:1308768:-1
position: 1308768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1325514-1325771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1323596-1323855:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1320271-1320393:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1315708-1315850:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1315036-1315119:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1312013-1312158:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1311574-1311644:-1:exon

position:1311574:-1
position: 1311574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1311644:-1
position: 1311644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1310410-1310483:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1308768-1308834:-1:exon

LOC102154487
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102154487
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1326230..1336859
location: region:1326230-1336859:1
so has part: feature:1326230-1336859:1:exon
subclass of: SO_0000011

102154487
type: Gene
SIO_000068: ncbigene

position:1326230:1
position: 1326230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1336859:1
position: 1336859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326230-1336859:1:exon

LOC102154487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154487
product: uncharacterized LOC102154487, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005385565.1
SIO_010081: LOC102154487
subclass of: SO_0000673
so part of: LOC102154487
location: join(1326230..1327022,1327236..1327366,1327794..1327928,1330054..1330436,1331114..1331235,1333518..1333618,1333755..1333925,1334434..1335228)
location: region:1326230-1335228:1
so has part: feature:1326230-1327022:1:exon
so has part: feature:1327236-1327366:1:exon
so has part: feature:1327794-1327928:1:exon
so has part: feature:1330054-1330436:1:exon
so has part: feature:1331114-1331235:1:exon
so has part: feature:1333518-1333618:1:exon
so has part: feature:1333755-1333925:1:exon
so has part: feature:1334434-1335228:1:exon

position:1335228:1
position: 1335228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326230-1327022:1:exon

position:1327022:1
position: 1327022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1327236-1327366:1:exon

position:1327236:1
position: 1327236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327366:1
position: 1327366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327794-1327928:1:exon

position:1327794:1
position: 1327794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1327928:1
position: 1327928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1330054-1330436:1:exon

position:1330054:1
position: 1330054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1330436:1
position: 1330436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1331114-1331235:1:exon

position:1331114:1
position: 1331114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331235:1
position: 1331235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1333518-1333618:1:exon

position:1333518:1
position: 1333518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333618:1
position: 1333618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1333755-1333925:1:exon

position:1333755:1
position: 1333755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333925:1
position: 1333925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1334434-1335228:1:exon

position:1334434:1
position: 1334434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102154487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154487
product: uncharacterized LOC102154487, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005385564.1
SIO_010081: LOC102154487
subclass of: SO_0000673
so part of: LOC102154487
location: join(1326232..1327022,1327236..1327379,1327794..1327928,1330054..1330436,1333518..1333618,1333755..1333925,1334434..1335228)
location: region:1326232-1335228:1
so has part: feature:1326232-1327022:1:exon
so has part: feature:1327236-1327379:1:exon
so has part: feature:1327794-1327928:1:exon
so has part: feature:1330054-1330436:1:exon
so has part: feature:1333518-1333618:1:exon
so has part: feature:1333755-1333925:1:exon
so has part: feature:1334434-1335228:1:exon

position:1326232:1
position: 1326232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326232-1327022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327236-1327379:1:exon

position:1327379:1
position: 1327379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1327794-1327928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1330054-1330436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333518-1333618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333755-1333925:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334434-1335228:1:exon

LOC102154487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154487
product: uncharacterized LOC102154487, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005385563.1
SIO_010081: LOC102154487
subclass of: SO_0000673
so part of: LOC102154487
location: join(1326233..1327022,1327236..1327366,1327794..1327928,1330054..1330436,1333518..1333618,1333755..1333925,1334434..1335502,1336132..1336859)
location: region:1326233-1336859:1
so has part: feature:1326233-1327022:1:exon
so has part: feature:1327236-1327366:1:exon
so has part: feature:1327794-1327928:1:exon
so has part: feature:1330054-1330436:1:exon
so has part: feature:1333518-1333618:1:exon
so has part: feature:1333755-1333925:1:exon
so has part: feature:1334434-1335502:1:exon
so has part: feature:1336132-1336859:1:exon

position:1326233:1
position: 1326233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326233-1327022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327236-1327366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327794-1327928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1330054-1330436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333518-1333618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333755-1333925:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334434-1335502:1:exon

position:1335502:1
position: 1335502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1336132-1336859:1:exon

position:1336132:1
position: 1336132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102154487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154487
product: uncharacterized LOC102154487, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005385566.1
SIO_010081: LOC102154487
subclass of: SO_0000673
so part of: LOC102154487
location: join(1326234..1327022,1327236..1327366,1327794..1327928,1330054..1330436,1333518..1333618,1333755..1333925,1334434..1334879,1335270..1335604)
location: region:1326234-1335604:1
so has part: feature:1326234-1327022:1:exon
so has part: feature:1327236-1327366:1:exon
so has part: feature:1327794-1327928:1:exon
so has part: feature:1330054-1330436:1:exon
so has part: feature:1333518-1333618:1:exon
so has part: feature:1333755-1333925:1:exon
so has part: feature:1334434-1334879:1:exon
so has part: feature:1335270-1335604:1:exon

position:1326234:1
position: 1326234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1335604:1
position: 1335604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1326234-1327022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327236-1327366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327794-1327928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1330054-1330436:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333518-1333618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1333755-1333925:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1334434-1334879:1:exon

position:1334879:1
position: 1334879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1335270-1335604:1:exon

position:1335270:1
position: 1335270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102154487
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154487
product: uncharacterized LOC102154487, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005385567.1
SIO_010081: LOC102154487
subclass of: SO_0000673
so part of: LOC102154487
location: join(1326234..1327022,1327236..1327366,1327794..1327928,1333518..1333618,1333755..1333925,1334434..1335228)
location: region:1326234-1335228:1
so has part: feature:1326234-1327022:1:exon
so has part: feature:1327236-1327366:1:exon
so has part: feature:1327794-1327928:1:exon
so has part: feature:1333518-1333618:1:exon
so has part: feature:1333755-1333925:1:exon
so has part: feature:1334434-1335228:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1326234-1327022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1327236-1327366:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1327794-1327928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333518-1333618:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1333755-1333925:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1334434-1335228:1:exon

REN
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: REN
note: renin; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1328102..1338487)
location: region:1328102-1338487:-1
so has part: feature:1328102-1338487:-1:exon
subclass of: SO_0000010

403838
type: Gene
SIO_000068: ncbigene

position:1328102:-1
position: 1328102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1338487:-1
position: 1338487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1328102-1338487:-1:exon

REN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: REN
product: renin
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001003194.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001003194.2
SIO_010081: REN
subclass of: SO_0000673
so part of: REN
location: complement(join(1328102..1328379,1329196..1329294,1329522..1329666,1330033..1330152,1332332..1332528,1333477..1333595,1334177..1334300,1334874..1335024,1338393..1338487))
location: region:1328102-1338487:-1
so has part: feature:1338393-1338487:-1:exon
so has part: feature:1334874-1335024:-1:exon
so has part: feature:1334177-1334300:-1:exon
so has part: feature:1333477-1333595:-1:exon
so has part: feature:1332332-1332528:-1:exon
so has part: feature:1330033-1330152:-1:exon
so has part: feature:1329522-1329666:-1:exon
so has part: feature:1329196-1329294:-1:exon
so has part: feature:1328102-1328379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1338393-1338487:-1:exon

position:1338393:-1
position: 1338393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1334874-1335024:-1:exon

position:1334874:-1
position: 1334874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1335024:-1
position: 1335024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1334177-1334300:-1:exon

position:1334177:-1
position: 1334177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334300:-1
position: 1334300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1333477-1333595:-1:exon

position:1333477:-1
position: 1333477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333595:-1
position: 1333595
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1332332-1332528:-1:exon

position:1332332:-1
position: 1332332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1332528:-1
position: 1332528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1330033-1330152:-1:exon

position:1330033:-1
position: 1330033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1330152:-1
position: 1330152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1329522-1329666:-1:exon

position:1329522:-1
position: 1329522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329666:-1
position: 1329666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1329196-1329294:-1:exon

position:1329196:-1
position: 1329196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329294:-1
position: 1329294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1328102-1328379:-1:exon

position:1328379:-1
position: 1328379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

REN
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: REN
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: renin precursor
translation: MARCRMPRWGLLLVLWGSCTFGLPADTGAFRRIFLKKMPSIRESLKERGVDVAGLGAEWNQFTKRLSSGNSTSPVVLTNYLDTQYYGEIGIGTPPQTFKVVFDTGSANLWVPSTRCSPLYTACEIHCLYDSSESSSYMENGTTFTIRYGSGKVKGFLSQDMVTVGGITVTQTFGEVTELPLIPFMLAKFDGVLGMGFPAQAVGGVTPVFDHILSQGVLKEEVFSVYYSRNSHLLGGEVVLGGSDPQYYQGNFHYVSISKTGSWQIKMKGVSVRSATLVCEEGCMVVVDTGASYISGPTSSLRLLMDTLGAQELSTNEYVVNCNQVPTLPDISFHLGGRAYTLTSKDYVLQDPYGNEDLCTLALHGLDVPPPTGPVWVLGASFIRKFYTEFDRHNNRIGFALAR
SIO_010081: REN
subclass of: SO_0000673
so part of: REN
location: complement(join(1328218..1328379,1329196..1329294,1329522..1329666,1330033..1330152,1332332..1332528,1333477..1333595,1334177..1334300,1334874..1335024,1338393..1338487))
location: region:1328218-1338487:-1
so has part: feature:1338393-1338487:-1:exon
so has part: feature:1334874-1335024:-1:exon
so has part: feature:1334177-1334300:-1:exon
so has part: feature:1333477-1333595:-1:exon
so has part: feature:1332332-1332528:-1:exon
so has part: feature:1330033-1330152:-1:exon
so has part: feature:1329522-1329666:-1:exon
so has part: feature:1329196-1329294:-1:exon
so has part: feature:1328218-1328379:-1:exon

NP_001003194.1
type: Protein
SIO_000068: ncbiprotein

position:1328218:-1
position: 1328218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338393-1338487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1334874-1335024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1334177-1334300:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1333477-1333595:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1332332-1332528:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1330033-1330152:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1329522-1329666:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1329196-1329294:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1328218-1328379:-1:exon

REN
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9615
gene: REN
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: REN
subclass of: SO_0000673
so part of: REN
location: complement(1338422..1338487)
location: region:1338422-1338487:-1
so has part: feature:1338422-1338487:-1:exon

position:1338422:-1
position: 1338422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1338422-1338487:-1:exon

REN
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: REN
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q6DYE7.1); glycosylation site
SIO_010081: REN
subclass of: SO_0000673
so part of: REN
location: complement(1334910..1334912)
location: region:1334910-1334912:-1
so has part: feature:1334910-1334912:-1:exon

position:1334910:-1
position: 1334910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1334912:-1
position: 1334912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1334910-1334912:-1:exon

REN
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
gene: REN
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q6DYE7.1); glycosylation site
SIO_010081: REN
subclass of: SO_0000673
so part of: REN
location: complement(1333546..1333548)
location: region:1333546-1333548:-1
so has part: feature:1333546-1333548:-1:exon

position:1333546:-1
position: 1333546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1333548:-1
position: 1333548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1333546-1333548:-1:exon

KISS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: KISS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1351942..1357788)
location: region:1351942-1357788:-1
so has part: feature:1351942-1357788:-1:exon
subclass of: SO_0000010

106558365
type: Gene
SIO_000068: ncbigene

position:1351942:-1
position: 1351942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1357788:-1
position: 1357788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1351942-1357788:-1:exon

KISS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: KISS1
product: KiSS-1 metastasis suppressor, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038586427.1
SIO_010081: KISS1
subclass of: SO_0000673
so part of: KISS1
location: complement(join(1351942..1352828,1352920..1352980,1354123..1357788))
location: region:1351942-1357788:-1
so has part: feature:1354123-1357788:-1:exon
so has part: feature:1352920-1352980:-1:exon
so has part: feature:1351942-1352828:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1354123-1357788:-1:exon

position:1354123:-1
position: 1354123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1352920-1352980:-1:exon

position:1352920:-1
position: 1352920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352980:-1
position: 1352980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1351942-1352828:-1:exon

position:1352828:-1
position: 1352828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KISS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: KISS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metastasis-suppressor KiSS-1 isoform X1
translation: MLGSAPAPSPHRAPDLILSPSVSASGHCQHLHHLTRMNSLVSWQLMLLLCATSFRETLEKVAPMETPGPAGMHFLGRGWEGAHELLENEGYHIFQSEASLLICKLFIWFDIFNKHLRPYYIQRGRDRQGARKSSKAECPANTAGLFPTSTLFASKREVMPQKRYFRSLWRTLETEAMLKERGASGLTVRARMLLRVVGWCGAWGPVPSWSRRAGKGWSRLPEPCPGAASPQPLRGSPLGQRLGAQALPAPWERSPPRAPQRHLMPARRGADLPAYNWNVFGLRYGRRRAATPGLRGGTPSPRLRVPVGWGLGLRS
SIO_010081: KISS1
subclass of: SO_0000673
so part of: KISS1
location: complement(join(1352247..1352828,1352920..1352980,1354123..1354427))
location: region:1352247-1354427:-1
so has part: feature:1354123-1354427:-1:exon
so has part: feature:1352920-1352980:-1:exon
so has part: feature:1352247-1352828:-1:exon

XP_038442355.1
type: Protein
SIO_000068: ncbiprotein

position:1352247:-1
position: 1352247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1354427:-1
position: 1354427
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354123-1354427:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352920-1352980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352247-1352828:-1:exon

GOLT1A
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: GOLT1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1357933..1373532)
location: region:1357933-1373532:-1
so has part: feature:1357933-1373532:-1:exon
subclass of: SO_0000010

606914
type: Gene
SIO_000068: ncbigene

position:1357933:-1
position: 1357933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373532:-1
position: 1373532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1357933-1373532:-1:exon

GOLT1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: GOLT1A
product: golgi transport 1A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038585980.1
SIO_010081: GOLT1A
subclass of: SO_0000673
so part of: GOLT1A
location: complement(join(1357933..1358290,1358929..1358992,1360933..1361045,1362133..1362224,1373005..1373120,1373261..1373532))
location: region:1357933-1373532:-1
so has part: feature:1373261-1373532:-1:exon
so has part: feature:1373005-1373120:-1:exon
so has part: feature:1362133-1362224:-1:exon
so has part: feature:1360933-1361045:-1:exon
so has part: feature:1358929-1358992:-1:exon
so has part: feature:1357933-1358290:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1373261-1373532:-1:exon

position:1373261:-1
position: 1373261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1373005-1373120:-1:exon

position:1373005:-1
position: 1373005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373120:-1
position: 1373120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1362133-1362224:-1:exon

position:1362133:-1
position: 1362133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1362224:-1
position: 1362224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1360933-1361045:-1:exon

position:1360933:-1
position: 1360933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361045:-1
position: 1361045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1358929-1358992:-1:exon

position:1358929:-1
position: 1358929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1358992:-1
position: 1358992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1357933-1358290:-1:exon

position:1358290:-1
position: 1358290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GOLT1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: GOLT1A
product: golgi transport 1A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 34 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038585981.1
SIO_010081: GOLT1A
subclass of: SO_0000673
so part of: GOLT1A
location: complement(join(1357933..1358290,1358929..1358992,1360933..1361111,1362133..1362224,1373005..1373120,1373261..1373442))
location: region:1357933-1373442:-1
so has part: feature:1373261-1373442:-1:exon
so has part: feature:1373005-1373120:-1:exon
so has part: feature:1362133-1362224:-1:exon
so has part: feature:1360933-1361111:-1:exon
so has part: feature:1358929-1358992:-1:exon
so has part: feature:1357933-1358290:-1:exon

position:1373442:-1
position: 1373442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373261-1373442:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373005-1373120:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1362133-1362224:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1360933-1361111:-1:exon

position:1361111:-1
position: 1361111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1358929-1358992:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1357933-1358290:-1:exon

GOLT1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: GOLT1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein GOT1A isoform X1
translation: MISISEWQKIGVGTTGFGIFFILFGILLYFDSVLLAFGNRHKLKGTSFFLGGVVIVLLRWPLLGMLLETYGFLSLFKGFFPVVFGFLGNASDIPFLSVLFRRLQGTSSMV
SIO_010081: GOLT1A
subclass of: SO_0000673
so part of: GOLT1A
location: complement(join(1358252..1358290,1358929..1358992,1360933..1361045,1362133..1362224,1373005..1373029))
location: region:1358252-1373029:-1
so has part: feature:1373005-1373029:-1:exon
so has part: feature:1362133-1362224:-1:exon
so has part: feature:1360933-1361045:-1:exon
so has part: feature:1358929-1358992:-1:exon
so has part: feature:1358252-1358290:-1:exon

XP_038441908.1
type: Protein
SIO_000068: ncbiprotein

position:1358252:-1
position: 1358252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373029:-1
position: 1373029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1373005-1373029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362133-1362224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360933-1361045:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358929-1358992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358252-1358290:-1:exon

GOLT1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: GOLT1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle transport protein GOT1A isoform X2
translation: MISISEWQKIGVGTTGFGIFFILFGILLYFDSVLLAFGNLLFLTGLLLIIGLRKTFSFFFQRHKLKGTSFFLGGVVIVLLRWPLLGMLLETYGFLSLFKGFFPVVFGFLGNASDIPFLSVLFRRLQGTSSMV
SIO_010081: GOLT1A
subclass of: SO_0000673
so part of: GOLT1A
location: complement(join(1358252..1358290,1358929..1358992,1360933..1361111,1362133..1362224,1373005..1373029))
location: region:1358252-1373029:-1
so has part: feature:1373005-1373029:-1:exon
so has part: feature:1362133-1362224:-1:exon
so has part: feature:1360933-1361111:-1:exon
so has part: feature:1358929-1358992:-1:exon
so has part: feature:1358252-1358290:-1:exon

XP_038441909.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1373005-1373029:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1362133-1362224:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1360933-1361111:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358929-1358992:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358252-1358290:-1:exon

PLEKHA6
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: PLEKHA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1378805..1519290)
location: region:1378805-1519290:-1
so has part: feature:1378805-1519290:-1:exon
subclass of: SO_0000010

478936
type: Gene
SIO_000068: ncbigene

position:1378805:-1
position: 1378805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519290:-1
position: 1519290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378805-1519290:-1:exon

PLEKHA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PLEKHA6
product: pleckstrin homology domain containing A6, transcript variant X20
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038585982.1
SIO_010081: PLEKHA6
subclass of: SO_0000673
so part of: PLEKHA6
location: complement(join(1378805..1382688,1383361..1383484,1388269..1388414,1388931..1389064,1389154..1389321,1390357..1390530,1391610..1391716,1391928..1392057,1394386..1394525,1395099..1395210,1396533..1396628,1397522..1397671,1397951..1398031,1399327..1399395,1406130..1406657,1408052..1408534,1410073..1410215,1413642..1413742,1416021..1416093,1416774..1416878,1422164..1422278,1422985..1423065,1506469..1506526,1513181..1513257,1519153..1519290))
location: region:1378805-1519290:-1
so has part: feature:1519153-1519290:-1:exon
so has part: feature:1513181-1513257:-1:exon
so has part: feature:1506469-1506526:-1:exon
so has part: feature:1422985-1423065:-1:exon
so has part: feature:1422164-1422278:-1:exon
so has part: feature:1416774-1416878:-1:exon
so has part: feature:1416021-1416093:-1:exon
so has part: feature:1413642-1413742:-1:exon
so has part: feature:1410073-1410215:-1:exon
so has part: feature:1408052-1408534:-1:exon
so has part: feature:1406130-1406657:-1:exon
so has part: feature:1399327-1399395:-1:exon
so has part: feature:1397951-1398031:-1:exon
so has part: feature:1397522-1397671:-1:exon
so has part: feature:1396533-1396628:-1:exon
so has part: feature:1395099-1395210:-1:exon
so has part: feature:1394386-1394525:-1:exon
so has part: feature:1391928-1392057:-1:exon
so has part: feature:1391610-1391716:-1:exon
so has part: feature:1390357-1390530:-1:exon
so has part: feature:1389154-1389321:-1:exon
so has part: feature:1388931-1389064:-1:exon
so has part: feature:1388269-1388414:-1:exon
so has part: feature:1383361-1383484:-1:exon
so has part: feature:1378805-1382688:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1519153-1519290:-1:exon

position:1519153:-1
position: 1519153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1513181-1513257:-1:exon

position:1513181:-1
position: 1513181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513257:-1
position: 1513257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1506469-1506526:-1:exon

position:1506469:-1
position: 1506469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1506526:-1
position: 1506526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1422985-1423065:-1:exon

position:1422985:-1
position: 1422985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1423065:-1
position: 1423065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1422164-1422278:-1:exon

position:1422164:-1
position: 1422164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1422278:-1
position: 1422278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1416774-1416878:-1:exon

position:1416774:-1
position: 1416774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416878:-1
position: 1416878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1416021-1416093:-1:exon

position:1416021:-1
position: 1416021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1416093:-1
position: 1416093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1413642-1413742:-1:exon

position:1413642:-1
position: 1413642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413742:-1
position: 1413742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1410073-1410215:-1:exon

position:1410073:-1
position: 1410073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1410215:-1
position: 1410215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1408052-1408534:-1:exon

position:1408052:-1
position: 1408052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408534:-1
position: 1408534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1406130-1406657:-1:exon

position:1406130:-1
position: 1406130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1406657:-1
position: 1406657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1399327-1399395:-1:exon

position:1399327:-1
position: 1399327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399395:-1
position: 1399395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1397951-1398031:-1:exon

position:1397951:-1
position: 1397951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1398031:-1
position: 1398031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1397522-1397671:-1:exon

position:1397522:-1
position: 1397522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1397671:-1
position: 1397671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1396533-1396628:-1:exon

position:1396533:-1
position: 1396533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1396628:-1
position: 1396628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1395099-1395210:-1:exon

position:1395099:-1
position: 1395099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1395210:-1
position: 1395210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1394386-1394525:-1:exon

position:1394386:-1
position: 1394386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1394525:-1
position: 1394525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1391928-1392057:-1:exon

position:1391928:-1
position: 1391928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392057:-1
position: 1392057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1391610-1391716:-1:exon

position:1391610:-1
position: 1391610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391716:-1
position: 1391716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1390357-1390530:-1:exon

position:1390357:-1
position: 1390357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1390530:-1
position: 1390530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1389154-1389321:-1:exon

position:1389154:-1
position: 1389154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389321:-1
position: 1389321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1388931-1389064:-1:exon

position:1388931:-1
position: 1388931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389064:-1
position: 1389064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1388269-1388414:-1:exon

position:1388269:-1
position: 1388269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1388414:-1
position: 1388414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1383361-1383484:-1:exon

position:1383361:-1
position: 1383361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1383484:-1
position: 1383484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1378805-1382688:-1:exon

position:1382688:-1
position: 1382688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PLEKHA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PLEKHA6
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: pleckstrin homology domain-containing family A member 6 isoform X11
translation: MAEEIAWLDLPGRWTYGVDRGGRVFFINDEEKSTSWMHPGTESPIQSGHSSSPGLPKGWEMDSTQEGAVYFINHNERRNTFLHPVTGQVPEENKKFNLKTSALDMSNKAGGKRPAITNSDVSNLNMVSEVPSERPGVRATRTSRKAIAFGKRSHSMKRNLNAPVTKAGWLFKQASSGVKQWNKRWFVLVDRCLFYYKDEKEESILGSIPLLSFRVAAVQPSDNISRKYTFKAEHAGVRTYFFSAESPEEQEAWIQAMGEAARVQIPPAQKSVPQAVHHNHEKPDSENIPPSKHHHQPSHNSVPKPEPEAKTRGEGDGRGCEKAERKPERPEVKSEPLVKANGIQAGPEPASEPGSPYPEGPSVPGGGDRPAQPNGWQYSSPSRPGSTAFLPQDSESGGHQRSFPPRANPDKIAQRKSSMNQLQQWVNLRRGVPPPEDLRSPSRFYPVSRRVPEYYGPYSSQYPDDYQYYPAGVRPDSICSMPAYDRISPPWTGEDKRLSFRNGGGPAFQLREWKEPPGYGRQDGPVWLPGPSPPSRQPVYYDELDATSGSLRRLSLQPRSHSVPRSPSQGSYGRARIYSPVRSPSARFERLPPRSEDLYADPAAYVMRRSISSPKVPPYPEVFRDGLHTYKLNEQDTDKLLGKLCEQNKVVREQDRLVQQLRAEKESLESALMGTHQELEMFGNQPAYPEKLLHKKESLQNQLINIRVELSQATTALTNSTIEYESLESEVSALHDDLWEQLNLDVQNEVLNRQIQKEIWRIQDVMEGLRKNNPSRGTDTAKHRGGLGPTATYNSNSPASPLSSASLTSPLSPFSLVSGSQGSPTKPGSSEPKASYEQSKKDPYQTSPLDTTRDISLVPTRQEVEAEKQAALNKVGIVPPRTKSPTDEEGTPSRVVRRSANGLTNGLSSRERPKSAVFPSEGKVKMSVEEQMDRMRRHQSGSMKEKRRSLQLPASPAPDPASRPTYKVVRRHRSIHEVDISNLEAALRAEEPGGQAYETPREEIARLRKMELEPQHYDVDINKELSTPDKVLIPERYIDLEPDTPLSPEELKEKQKKVERIKTLIAKSSMQNVVPIGEGDLVDVPQDSESQLQEQEKRIEISCALATEASRRGRMLSVQCATPSPPTSPASLTPPANPLSSDSPRGADSSHTMRV
SIO_010081: PLEKHA6
subclass of: SO_0000673
so part of: PLEKHA6
location: complement(join(1383369..1383484,1388269..1388414,1388931..1389064,1389154..1389321,1390357..1390530,1391610..1391716,1391928..1392057,1394386..1394525,1395099..1395210,1396533..1396628,1397522..1397671,1397951..1398031,1399327..1399395,1406130..1406657,1408052..1408534,1410073..1410215,1413642..1413742,1416021..1416093,1416774..1416878,1422164..1422278,1422985..1423065,1506469..1506526,1513181..1513257,1519153..1519235))
location: region:1383369-1519235:-1
so has part: feature:1519153-1519235:-1:exon
so has part: feature:1513181-1513257:-1:exon
so has part: feature:1506469-1506526:-1:exon
so has part: feature:1422985-1423065:-1:exon
so has part: feature:1422164-1422278:-1:exon
so has part: feature:1416774-1416878:-1:exon
so has part: feature:1416021-1416093:-1:exon
so has part: feature:1413642-1413742:-1:exon
so has part: feature:1410073-1410215:-1:exon
so has part: feature:1408052-1408534:-1:exon
so has part: feature:1406130-1406657:-1:exon
so has part: feature:1399327-1399395:-1:exon
so has part: feature:1397951-1398031:-1:exon
so has part: feature:1397522-1397671:-1:exon
so has part: feature:1396533-1396628:-1:exon
so has part: feature:1395099-1395210:-1:exon
so has part: feature:1394386-1394525:-1:exon
so has part: feature:1391928-1392057:-1:exon
so has part: feature:1391610-1391716:-1:exon
so has part: feature:1390357-1390530:-1:exon
so has part: feature:1389154-1389321:-1:exon
so has part: feature:1388931-1389064:-1:exon
so has part: feature:1388269-1388414:-1:exon
so has part: feature:1383369-1383484:-1:exon

XP_038441910.1
type: Protein
SIO_000068: ncbiprotein

position:1383369:-1
position: 1383369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519235:-1
position: 1519235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1519153-1519235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513181-1513257:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1506469-1506526:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1422985-1423065:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1422164-1422278:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1416774-1416878:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1416021-1416093:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1413642-1413742:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1410073-1410215:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1408052-1408534:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1406130-1406657:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1399327-1399395:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1397951-1398031:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1397522-1397671:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1396533-1396628:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1395099-1395210:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1394386-1394525:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1391928-1392057:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1391610-1391716:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1390357-1390530:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1389154-1389321:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1388931-1389064:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1388269-1388414:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1383369-1383484:-1:exon

LOC111094567
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094567
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1500505..1514901
location: region:1500505-1514901:1
so has part: feature:1500505-1514901:1:exon
subclass of: SO_0000011

111094567
type: Gene
SIO_000068: ncbigene

position:1500505:1
position: 1500505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1514901:1
position: 1514901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1500505-1514901:1:exon

LOC111094567
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094567
product: uncharacterized LOC111094567
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385568.1
SIO_010081: LOC111094567
subclass of: SO_0000673
so part of: LOC111094567
location: join(1500505..1500664,1504751..1504864,1514782..1514901)
location: region:1500505-1514901:1
so has part: feature:1500505-1500664:1:exon
so has part: feature:1504751-1504864:1:exon
so has part: feature:1514782-1514901:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1500505-1500664:1:exon

position:1500664:1
position: 1500664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1504751-1504864:1:exon

position:1504751:1
position: 1504751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1504864:1
position: 1504864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1514782-1514901:1:exon

position:1514782:1
position: 1514782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP1R15B
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: PPP1R15B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1541016..1548950)
location: region:1541016-1548950:-1
so has part: feature:1541016-1548950:-1:exon
subclass of: SO_0000010

488563
type: Gene
SIO_000068: ncbigene

position:1541016:-1
position: 1541016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1548950:-1
position: 1548950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1541016-1548950:-1:exon

PPP1R15B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PPP1R15B
product: protein phosphatase 1 regulatory subunit 15B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038586428.1
SIO_010081: PPP1R15B
subclass of: SO_0000673
so part of: PPP1R15B
location: complement(join(1541016..1543641,1547049..1548950))
location: region:1541016-1548950:-1
so has part: feature:1547049-1548950:-1:exon
so has part: feature:1541016-1543641:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1547049-1548950:-1:exon

position:1547049:-1
position: 1547049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1541016-1543641:-1:exon

position:1543641:-1
position: 1543641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP1R15B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PPP1R15B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 15B
translation: MEPAAEASRPRSRSRFRLPFPPRRPQPGPSQVPAALAPEQPADRGPAAPAPPQARPDPWTKLLSPLFAPLPSLLRKLLAWGRLLGGMIPARWVDFAAGHGALGALEARQDPAGAPAQKPACSPPLDWLQKGMHRQCSSPDPDPDLDLDLGAKAGAPDRAANALLLEPQPWRLELWPGGPQAPLCSARELGSWAPGPLKVQRVSGFGVVSYLWSPTHLDRLPRVGLGCQSGVGSGGTAGFQTLSPERRCLPEDAGPPERPKAELTCASWQGRPPLSREGLPEIHHLRMKRLEFLQQASKGQALPTPEQDNGYHSLEEEQNLSRMDLKPGGDSPAQCVPSAGVVPRRAQDPAEEDPVLSAKEAPLALERQGPSSEGCPSAGVPAGVPASKEPGEDQVSVGDSSDLEDSIPASTRPACSNRLIDYILGGTSSDLETSSDSGGETWDEEAEDDGFDSDSPLSASDLEQDPEGLHLWNSFYSVDPYDPQNFTATIQSAARIVPGDSSDSEKNLSGKSGLENSPQTGSLPESPDYNSGEEDDWESSADEAESLQLWNSFCNSEDPYNLLNFKAPFQTSGKNWKGCRDSEKPSEPTVAISDRHTFLSCEVQLLGSRESEGPDLVQGGVLSGERHARIKRKKVTFLEEVTEYYISEDEDRRGPWEQFARDACRFQKRIQETEDAIGYCLTFEHRERMFNRLQETCFKGLNAFKQC
SIO_010081: PPP1R15B
subclass of: SO_0000673
so part of: PPP1R15B
location: complement(join(1543420..1543641,1547049..1548950))
location: region:1543420-1548950:-1
so has part: feature:1547049-1548950:-1:exon
so has part: feature:1543420-1543641:-1:exon

XP_038442356.1
type: Protein
SIO_000068: ncbiprotein

position:1543420:-1
position: 1543420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547049-1548950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1543420-1543641:-1:exon

PIK3C2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: PIK3C2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1557935..1623716)
location: region:1557935-1623716:-1
so has part: feature:1557935-1623716:-1:exon
subclass of: SO_0000010

478938
type: Gene
SIO_000068: ncbigene

position:1557935:-1
position: 1557935
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1623716:-1
position: 1623716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557935-1623716:-1:exon

PIK3C2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PIK3C2B
product: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038585986.1
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1557935..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599892))
location: region:1557935-1599892:-1
so has part: feature:1598957-1599892:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1557935-1559994:-1:exon

position:1599892:-1
position: 1599892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1598957-1599892:-1:exon

position:1598957:-1
position: 1598957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

position:1595604:-1
position: 1595604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1595704:-1
position: 1595704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

position:1594840:-1
position: 1594840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594994:-1
position: 1594994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

position:1594405:-1
position: 1594405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1594525:-1
position: 1594525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

position:1591302:-1
position: 1591302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591413:-1
position: 1591413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

position:1591068:-1
position: 1591068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1591147:-1
position: 1591147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

position:1590652:-1
position: 1590652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1590715:-1
position: 1590715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

position:1589651:-1
position: 1589651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589797:-1
position: 1589797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

position:1588997:-1
position: 1588997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1589030:-1
position: 1589030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

position:1587923:-1
position: 1587923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1588118:-1
position: 1588118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

position:1586749:-1
position: 1586749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1586871:-1
position: 1586871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

position:1583229:-1
position: 1583229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1583396:-1
position: 1583396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

position:1582537:-1
position: 1582537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1582648:-1
position: 1582648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

position:1581037:-1
position: 1581037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1581179:-1
position: 1581179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

position:1579135:-1
position: 1579135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1579323:-1
position: 1579323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

position:1577398:-1
position: 1577398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577491:-1
position: 1577491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

position:1577151:-1
position: 1577151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1577245:-1
position: 1577245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

position:1576586:-1
position: 1576586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1576766:-1
position: 1576766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

position:1575687:-1
position: 1575687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575794:-1
position: 1575794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

position:1574959:-1
position: 1574959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1575051:-1
position: 1575051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

position:1574032:-1
position: 1574032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1574161:-1
position: 1574161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

position:1572513:-1
position: 1572513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1572649:-1
position: 1572649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

position:1568349:-1
position: 1568349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1568518:-1
position: 1568518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

position:1567713:-1
position: 1567713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567869:-1
position: 1567869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

position:1567272:-1
position: 1567272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1567381:-1
position: 1567381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

position:1566163:-1
position: 1566163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1566364:-1
position: 1566364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

position:1565601:-1
position: 1565601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1565725:-1
position: 1565725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

position:1564531:-1
position: 1564531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1564648:-1
position: 1564648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

position:1562363:-1
position: 1562363
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1562444:-1
position: 1562444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

position:1561846:-1
position: 1561846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1561952:-1
position: 1561952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

position:1560454:-1
position: 1560454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1560582:-1
position: 1560582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1557935-1559994:-1:exon

position:1559994:-1
position: 1559994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIK3C2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PIK3C2B
product: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038585983.1
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599980,1623596..1623716))
location: region:1559806-1623716:-1
so has part: feature:1623596-1623716:-1:exon
so has part: feature:1598957-1599980:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

position:1559806:-1
position: 1559806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1623596-1623716:-1:exon

position:1623596:-1
position: 1623596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1598957-1599980:-1:exon

position:1599980:-1
position: 1599980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PIK3C2B
product: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XM_038585984.1
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599980,1611256..1611359))
location: region:1559806-1611359:-1
so has part: feature:1611256-1611359:-1:exon
so has part: feature:1598957-1599980:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

position:1611359:-1
position: 1611359
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1611256-1611359:-1:exon

position:1611256:-1
position: 1611256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1598957-1599980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PIK3C2B
product: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038585985.1
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599980,1608214..1608347))
location: region:1559806-1608347:-1
so has part: feature:1608214-1608347:-1:exon
so has part: feature:1598957-1599980:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

position:1608347:-1
position: 1608347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1608214-1608347:-1:exon

position:1608214:-1
position: 1608214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1598957-1599980:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PIK3C2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X1
translation: MSSTQGSGEHWKSLESVGISRKELAMAEALQMEYDALSRLRHDKEESRAKQNTDSSLISWDEPVLDFYSKPAGRQKDLKLLRGLSGSDPTLNYNSLSPQEGLPNHSTSQGSQPGPDPWPKGSLAGDYLYIFDGSDEGLSLSPGQGDIDGSSKKLSPPPLPPRVSIWDTPPLPPRKGSPSSSKTSQPNDVNTFSLAEQPPGKLLGRRILEEEEELGGGAPGRLLGPVDYDGINDAITRLNLKSTYDTEMLRDTTRGWKEGRGPLDFSGKDTPGKPVARSKTMPPQVPPRTYASRYANGKNTTPGKNRRISAAPVDSRPHTIANGHELFEVSEERDEEVAAFCHMLDILRSGSDIQDYSLTGYVWSAVTPSPEHLGDEVNLKVTVLCDSLQEPLTFTCNCSSTVDLLIHQTLCYTHDELRDVDVGDFVLKPCGLEEFLQNKHALGSHEYIQYCRKFDIDIRLQLMEQKAVRSDLARTVNDDQSPSTLNYLVHLQERPVKQTISRQALGLLFDTYHNEVDAFLLADGDFPLKADRVVQSVKAICNALAAVETPEITNALNQLPPCPSRMQPKIQKDPTVLAVRENREKVVEALTASILDLVELYCSTFDADFQTAVHGSRKHDLVQEACHFSGPLAFTVYATHRIPITWATSYEDFYLSCSLSHGGKELCNPLYTRRAHFSKYLFHLIIWDQQICFPVQVNRLPRETLLCATLYALPIPLPGSSSEANKQRRLPEALGWVTTPLFNFRQVLTCGRKLLGLWPATQENPSARWSAPNFHQPDSVILQIDFPTSAFDIKFTSPPRDKFSPRYVFSSLREEDQRVLKNIMQKESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYALLKQWTHMNHQDALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDSPLVRFLLKRAVSDLRVTHYFFWLLKDGLKDSQFSIRYQYLLAALLCCCGKGLREEFNRQCWLVNTLAKLAQQVREATPSTRQGILRTGLEEVRQFFALNGSCRLPLSPSLLVKGIVPRDCSYFNSNAVPLKLSFQNVDPLGENIRIIFKCGDDLRQDMLTLQMIRIMNKIWVQEGLDMRMVIFRCFSTGRGRGMVEMIPNAETLRKIQVEHGVTGSFKDRPLADWLQKHNPGEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKTTGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSCGIPELSDLEDLKYVYDALRPQDTEANATTYFTRLIESSLGSVATKLNFFIHNLAQMKFTGSDDRLTLSFAPRTHTLKSSGRITDVFLCRHEKIFHPNKGYVYVVKVMRENSHEATYIQRTFEEFQELHNKLRLLFPSSLLPSFPSRFVIGRSRGEAVAERRREELNRYIWHLTHEAPEVAECDLVYTFFHPLSRDEKAAGTSPAPKSSDGSWARPVGKVGGEVKLSISYKNNKLFIMVMHIRGLQVLQDGNDPDPYVKIYLLPDPQKTTKKKTKVARKTCNPTYNEMLVYDGIPRGDLQQRELQLSVLSEQGFWENVLLGEVHIRLRELDLAQEKTGWFALGSRSHETL
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599892))
location: region:1559806-1599892:-1
so has part: feature:1598957-1599892:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

XP_038441911.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1598957-1599892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PIK3C2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X1
translation: MSSTQGSGEHWKSLESVGISRKELAMAEALQMEYDALSRLRHDKEESRAKQNTDSSLISWDEPVLDFYSKPAGRQKDLKLLRGLSGSDPTLNYNSLSPQEGLPNHSTSQGSQPGPDPWPKGSLAGDYLYIFDGSDEGLSLSPGQGDIDGSSKKLSPPPLPPRVSIWDTPPLPPRKGSPSSSKTSQPNDVNTFSLAEQPPGKLLGRRILEEEEELGGGAPGRLLGPVDYDGINDAITRLNLKSTYDTEMLRDTTRGWKEGRGPLDFSGKDTPGKPVARSKTMPPQVPPRTYASRYANGKNTTPGKNRRISAAPVDSRPHTIANGHELFEVSEERDEEVAAFCHMLDILRSGSDIQDYSLTGYVWSAVTPSPEHLGDEVNLKVTVLCDSLQEPLTFTCNCSSTVDLLIHQTLCYTHDELRDVDVGDFVLKPCGLEEFLQNKHALGSHEYIQYCRKFDIDIRLQLMEQKAVRSDLARTVNDDQSPSTLNYLVHLQERPVKQTISRQALGLLFDTYHNEVDAFLLADGDFPLKADRVVQSVKAICNALAAVETPEITNALNQLPPCPSRMQPKIQKDPTVLAVRENREKVVEALTASILDLVELYCSTFDADFQTAVHGSRKHDLVQEACHFSGPLAFTVYATHRIPITWATSYEDFYLSCSLSHGGKELCNPLYTRRAHFSKYLFHLIIWDQQICFPVQVNRLPRETLLCATLYALPIPLPGSSSEANKQRRLPEALGWVTTPLFNFRQVLTCGRKLLGLWPATQENPSARWSAPNFHQPDSVILQIDFPTSAFDIKFTSPPRDKFSPRYVFSSLREEDQRVLKNIMQKESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYALLKQWTHMNHQDALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDSPLVRFLLKRAVSDLRVTHYFFWLLKDGLKDSQFSIRYQYLLAALLCCCGKGLREEFNRQCWLVNTLAKLAQQVREATPSTRQGILRTGLEEVRQFFALNGSCRLPLSPSLLVKGIVPRDCSYFNSNAVPLKLSFQNVDPLGENIRIIFKCGDDLRQDMLTLQMIRIMNKIWVQEGLDMRMVIFRCFSTGRGRGMVEMIPNAETLRKIQVEHGVTGSFKDRPLADWLQKHNPGEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKTTGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSCGIPELSDLEDLKYVYDALRPQDTEANATTYFTRLIESSLGSVATKLNFFIHNLAQMKFTGSDDRLTLSFAPRTHTLKSSGRITDVFLCRHEKIFHPNKGYVYVVKVMRENSHEATYIQRTFEEFQELHNKLRLLFPSSLLPSFPSRFVIGRSRGEAVAERRREELNRYIWHLTHEAPEVAECDLVYTFFHPLSRDEKAAGTSPAPKSSDGSWARPVGKVGGEVKLSISYKNNKLFIMVMHIRGLQVLQDGNDPDPYVKIYLLPDPQKTTKKKTKVARKTCNPTYNEMLVYDGIPRGDLQQRELQLSVLSEQGFWENVLLGEVHIRLRELDLAQEKTGWFALGSRSHETL
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599892))
location: region:1559806-1599892:-1
so has part: feature:1598957-1599892:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

XP_038441912.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1598957-1599892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PIK3C2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X1
translation: MSSTQGSGEHWKSLESVGISRKELAMAEALQMEYDALSRLRHDKEESRAKQNTDSSLISWDEPVLDFYSKPAGRQKDLKLLRGLSGSDPTLNYNSLSPQEGLPNHSTSQGSQPGPDPWPKGSLAGDYLYIFDGSDEGLSLSPGQGDIDGSSKKLSPPPLPPRVSIWDTPPLPPRKGSPSSSKTSQPNDVNTFSLAEQPPGKLLGRRILEEEEELGGGAPGRLLGPVDYDGINDAITRLNLKSTYDTEMLRDTTRGWKEGRGPLDFSGKDTPGKPVARSKTMPPQVPPRTYASRYANGKNTTPGKNRRISAAPVDSRPHTIANGHELFEVSEERDEEVAAFCHMLDILRSGSDIQDYSLTGYVWSAVTPSPEHLGDEVNLKVTVLCDSLQEPLTFTCNCSSTVDLLIHQTLCYTHDELRDVDVGDFVLKPCGLEEFLQNKHALGSHEYIQYCRKFDIDIRLQLMEQKAVRSDLARTVNDDQSPSTLNYLVHLQERPVKQTISRQALGLLFDTYHNEVDAFLLADGDFPLKADRVVQSVKAICNALAAVETPEITNALNQLPPCPSRMQPKIQKDPTVLAVRENREKVVEALTASILDLVELYCSTFDADFQTAVHGSRKHDLVQEACHFSGPLAFTVYATHRIPITWATSYEDFYLSCSLSHGGKELCNPLYTRRAHFSKYLFHLIIWDQQICFPVQVNRLPRETLLCATLYALPIPLPGSSSEANKQRRLPEALGWVTTPLFNFRQVLTCGRKLLGLWPATQENPSARWSAPNFHQPDSVILQIDFPTSAFDIKFTSPPRDKFSPRYVFSSLREEDQRVLKNIMQKESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYALLKQWTHMNHQDALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDSPLVRFLLKRAVSDLRVTHYFFWLLKDGLKDSQFSIRYQYLLAALLCCCGKGLREEFNRQCWLVNTLAKLAQQVREATPSTRQGILRTGLEEVRQFFALNGSCRLPLSPSLLVKGIVPRDCSYFNSNAVPLKLSFQNVDPLGENIRIIFKCGDDLRQDMLTLQMIRIMNKIWVQEGLDMRMVIFRCFSTGRGRGMVEMIPNAETLRKIQVEHGVTGSFKDRPLADWLQKHNPGEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKTTGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSCGIPELSDLEDLKYVYDALRPQDTEANATTYFTRLIESSLGSVATKLNFFIHNLAQMKFTGSDDRLTLSFAPRTHTLKSSGRITDVFLCRHEKIFHPNKGYVYVVKVMRENSHEATYIQRTFEEFQELHNKLRLLFPSSLLPSFPSRFVIGRSRGEAVAERRREELNRYIWHLTHEAPEVAECDLVYTFFHPLSRDEKAAGTSPAPKSSDGSWARPVGKVGGEVKLSISYKNNKLFIMVMHIRGLQVLQDGNDPDPYVKIYLLPDPQKTTKKKTKVARKTCNPTYNEMLVYDGIPRGDLQQRELQLSVLSEQGFWENVLLGEVHIRLRELDLAQEKTGWFALGSRSHETL
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599892))
location: region:1559806-1599892:-1
so has part: feature:1598957-1599892:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

XP_038441913.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1598957-1599892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PIK3C2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X1
translation: MSSTQGSGEHWKSLESVGISRKELAMAEALQMEYDALSRLRHDKEESRAKQNTDSSLISWDEPVLDFYSKPAGRQKDLKLLRGLSGSDPTLNYNSLSPQEGLPNHSTSQGSQPGPDPWPKGSLAGDYLYIFDGSDEGLSLSPGQGDIDGSSKKLSPPPLPPRVSIWDTPPLPPRKGSPSSSKTSQPNDVNTFSLAEQPPGKLLGRRILEEEEELGGGAPGRLLGPVDYDGINDAITRLNLKSTYDTEMLRDTTRGWKEGRGPLDFSGKDTPGKPVARSKTMPPQVPPRTYASRYANGKNTTPGKNRRISAAPVDSRPHTIANGHELFEVSEERDEEVAAFCHMLDILRSGSDIQDYSLTGYVWSAVTPSPEHLGDEVNLKVTVLCDSLQEPLTFTCNCSSTVDLLIHQTLCYTHDELRDVDVGDFVLKPCGLEEFLQNKHALGSHEYIQYCRKFDIDIRLQLMEQKAVRSDLARTVNDDQSPSTLNYLVHLQERPVKQTISRQALGLLFDTYHNEVDAFLLADGDFPLKADRVVQSVKAICNALAAVETPEITNALNQLPPCPSRMQPKIQKDPTVLAVRENREKVVEALTASILDLVELYCSTFDADFQTAVHGSRKHDLVQEACHFSGPLAFTVYATHRIPITWATSYEDFYLSCSLSHGGKELCNPLYTRRAHFSKYLFHLIIWDQQICFPVQVNRLPRETLLCATLYALPIPLPGSSSEANKQRRLPEALGWVTTPLFNFRQVLTCGRKLLGLWPATQENPSARWSAPNFHQPDSVILQIDFPTSAFDIKFTSPPRDKFSPRYVFSSLREEDQRVLKNIMQKESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYALLKQWTHMNHQDALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDSPLVRFLLKRAVSDLRVTHYFFWLLKDGLKDSQFSIRYQYLLAALLCCCGKGLREEFNRQCWLVNTLAKLAQQVREATPSTRQGILRTGLEEVRQFFALNGSCRLPLSPSLLVKGIVPRDCSYFNSNAVPLKLSFQNVDPLGENIRIIFKCGDDLRQDMLTLQMIRIMNKIWVQEGLDMRMVIFRCFSTGRGRGMVEMIPNAETLRKIQVEHGVTGSFKDRPLADWLQKHNPGEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKTTGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSCGIPELSDLEDLKYVYDALRPQDTEANATTYFTRLIESSLGSVATKLNFFIHNLAQMKFTGSDDRLTLSFAPRTHTLKSSGRITDVFLCRHEKIFHPNKGYVYVVKVMRENSHEATYIQRTFEEFQELHNKLRLLFPSSLLPSFPSRFVIGRSRGEAVAERRREELNRYIWHLTHEAPEVAECDLVYTFFHPLSRDEKAAGTSPAPKSSDGSWARPVGKVGGEVKLSISYKNNKLFIMVMHIRGLQVLQDGNDPDPYVKIYLLPDPQKTTKKKTKVARKTCNPTYNEMLVYDGIPRGDLQQRELQLSVLSEQGFWENVLLGEVHIRLRELDLAQEKTGWFALGSRSHETL
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1598957..1599892))
location: region:1559806-1599892:-1
so has part: feature:1598957-1599892:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

XP_038441914.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1598957-1599892:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PIK3C2B
product: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038585988.1
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1597393..1597488))
location: region:1559806-1597488:-1
so has part: feature:1597393-1597488:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

position:1597488:-1
position: 1597488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1597393-1597488:-1:exon

position:1597393:-1
position: 1597393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PIK3C2B
product: phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038585987.1
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1596958..1597261))
location: region:1559806-1597261:-1
so has part: feature:1596958-1597261:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

position:1597261:-1
position: 1597261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596958-1597261:-1:exon

position:1596958:-1
position: 1596958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PIK3C2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X2
translation: MRPWSPPPQLGAGAHPTRRGHLSGPRPIPPPRLHRAFGRRDPPYPRPAGPALEMVGSTCQPGTPTASLCLADSPSQRRAMPPGPASRANVDSRPHTIANGHELFEVSEERDEEVAAFCHMLDILRSGSDIQDYSLTGYVWSAVTPSPEHLGDEVNLKVTVLCDSLQEPLTFTCNCSSTVDLLIHQTLCYTHDELRDVDVGDFVLKPCGLEEFLQNKHALGSHEYIQYCRKFDIDIRLQLMEQKAVRSDLARTVNDDQSPSTLNYLVHLQERPVKQTISRQALGLLFDTYHNEVDAFLLADGDFPLKADRVVQSVKAICNALAAVETPEITNALNQLPPCPSRMQPKIQKDPTVLAVRENREKVVEALTASILDLVELYCSTFDADFQTAVHGSRKHDLVQEACHFSGPLAFTVYATHRIPITWATSYEDFYLSCSLSHGGKELCNPLYTRRAHFSKYLFHLIIWDQQICFPVQVNRLPRETLLCATLYALPIPLPGSSSEANKQRRLPEALGWVTTPLFNFRQVLTCGRKLLGLWPATQENPSARWSAPNFHQPDSVILQIDFPTSAFDIKFTSPPRDKFSPRYVFSSLREEDQRVLKNIMQKESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYALLKQWTHMNHQDALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDSPLVRFLLKRAVSDLRVTHYFFWLLKDGLKDSQFSIRYQYLLAALLCCCGKGLREEFNRQCWLVNTLAKLAQQVREATPSTRQGILRTGLEEVRQFFALNGSCRLPLSPSLLVKGIVPRDCSYFNSNAVPLKLSFQNVDPLGENIRIIFKCGDDLRQDMLTLQMIRIMNKIWVQEGLDMRMVIFRCFSTGRGRGMVEMIPNAETLRKIQVEHGVTGSFKDRPLADWLQKHNPGEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKTTGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSCGIPELSDLEDLKYVYDALRPQDTEANATTYFTRLIESSLGSVATKLNFFIHNLAQMKFTGSDDRLTLSFAPRTHTLKSSGRITDVFLCRHEKIFHPNKGYVYVVKVMRENSHEATYIQRTFEEFQELHNKLRLLFPSSLLPSFPSRFVIGRSRGEAVAERRREELNRYIWHLTHEAPEVAECDLVYTFFHPLSRDEKAAGTSPAPKSSDGSWARPVGKVGGEVKLSISYKNNKLFIMVMHIRGLQVLQDGNDPDPYVKIYLLPDPQKTTKKKTKVARKTCNPTYNEMLVYDGIPRGDLQQRELQLSVLSEQGFWENVLLGEVHIRLRELDLAQEKTGWFALGSRSHETL
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595704,1596958..1597224))
location: region:1559806-1597224:-1
so has part: feature:1596958-1597224:-1:exon
so has part: feature:1595604-1595704:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

XP_038441915.1
type: Protein
SIO_000068: ncbiprotein

position:1597224:-1
position: 1597224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1596958-1597224:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1595604-1595704:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1559806-1559994:-1:exon

PIK3C2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PIK3C2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta isoform X3
translation: MLDILRSGSDIQDYSLTGYVWSAVTPSPEHLGDEVNLKVTVLCDSLQEPLTFTCNCSSTVDLLIHQTLCYTHDELRDVDVGDFVLKPCGLEEFLQNKHALGSHEYIQYCRKFDIDIRLQLMEQKAVRSDLARTVNDDQSPSTLNYLVHLQERPVKQTISRQALGLLFDTYHNEVDAFLLADGDFPLKADRVVQSVKAICNALAAVETPEITNALNQLPPCPSRMQPKIQKDPTVLAVRENREKVVEALTASILDLVELYCSTFDADFQTAVHGSRKHDLVQEACHFSGPLAFTVYATHRIPITWATSYEDFYLSCSLSHGGKELCNPLYTRRAHFSKYLFHLIIWDQQICFPVQVNRLPRETLLCATLYALPIPLPGSSSEANKQRRLPEALGWVTTPLFNFRQVLTCGRKLLGLWPATQENPSARWSAPNFHQPDSVILQIDFPTSAFDIKFTSPPRDKFSPRYVFSSLREEDQRVLKNIMQKESLYWLTDADKKRLWEKRYYCHSEVSSLPLVLASAPSWEWACLPDIYALLKQWTHMNHQDALGLLHATFPDQEVRRMAVQWIGSLSDAELLDYLPQLVQALKYECYLDSPLVRFLLKRAVSDLRVTHYFFWLLKDGLKDSQFSIRYQYLLAALLCCCGKGLREEFNRQCWLVNTLAKLAQQVREATPSTRQGILRTGLEEVRQFFALNGSCRLPLSPSLLVKGIVPRDCSYFNSNAVPLKLSFQNVDPLGENIRIIFKCGDDLRQDMLTLQMIRIMNKIWVQEGLDMRMVIFRCFSTGRGRGMVEMIPNAETLRKIQVEHGVTGSFKDRPLADWLQKHNPGEDEYEKAVENFIYSCAGCCVATYVLGICDRHNDNIMLKTTGHMFHIDFGRFLGHAQMFGNIKRDRAPFVFTSDMAYVINGGDKPSSRFHDFVDLCCQAYNLIRKHTHLFLNLLGLMLSCGIPELSDLEDLKYVYDALRPQDTEANATTYFTRLIESSLGSVATKLNFFIHNLAQMKFTGSDDRLTLSFAPRTHTLKSSGRITDVFLCRHEKIFHPNKGYVYVVKVMRENSHEATYIQRTFEEFQELHNKLRLLFPSSLLPSFPSRFVIGRSRGEAVAERRREELNRYIWHLTHEAPEVAECDLVYTFFHPLSRDEKAAGTSPAPKSSDGSWARPVGKVGGEVKLSISYKNNKLFIMVMHIRGLQVLQDGNDPDPYVKIYLLPDPQKTTKKKTKVARKTCNPTYNEMLVYDGIPRGDLQQRELQLSVLSEQGFWENVLLGEVHIRLRELDLAQEKTGWFALGSRSHETL
SIO_010081: PIK3C2B
subclass of: SO_0000673
so part of: PIK3C2B
location: complement(join(1559806..1559994,1560454..1560582,1561846..1561952,1562363..1562444,1564531..1564648,1565601..1565725,1566163..1566364,1567272..1567381,1567713..1567869,1568349..1568518,1572513..1572649,1574032..1574161,1574959..1575051,1575687..1575794,1576586..1576766,1577151..1577245,1577398..1577491,1579135..1579323,1581037..1581179,1582537..1582648,1583229..1583396,1586749..1586871,1587923..1588118,1588997..1589030,1589651..1589797,1590652..1590715,1591068..1591147,1591302..1591413,1594405..1594525,1594840..1594994,1595604..1595614))
location: region:1559806-1595614:-1
so has part: feature:1595604-1595614:-1:exon
so has part: feature:1594840-1594994:-1:exon
so has part: feature:1594405-1594525:-1:exon
so has part: feature:1591302-1591413:-1:exon
so has part: feature:1591068-1591147:-1:exon
so has part: feature:1590652-1590715:-1:exon
so has part: feature:1589651-1589797:-1:exon
so has part: feature:1588997-1589030:-1:exon
so has part: feature:1587923-1588118:-1:exon
so has part: feature:1586749-1586871:-1:exon
so has part: feature:1583229-1583396:-1:exon
so has part: feature:1582537-1582648:-1:exon
so has part: feature:1581037-1581179:-1:exon
so has part: feature:1579135-1579323:-1:exon
so has part: feature:1577398-1577491:-1:exon
so has part: feature:1577151-1577245:-1:exon
so has part: feature:1576586-1576766:-1:exon
so has part: feature:1575687-1575794:-1:exon
so has part: feature:1574959-1575051:-1:exon
so has part: feature:1574032-1574161:-1:exon
so has part: feature:1572513-1572649:-1:exon
so has part: feature:1568349-1568518:-1:exon
so has part: feature:1567713-1567869:-1:exon
so has part: feature:1567272-1567381:-1:exon
so has part: feature:1566163-1566364:-1:exon
so has part: feature:1565601-1565725:-1:exon
so has part: feature:1564531-1564648:-1:exon
so has part: feature:1562363-1562444:-1:exon
so has part: feature:1561846-1561952:-1:exon
so has part: feature:1560454-1560582:-1:exon
so has part: feature:1559806-1559994:-1:exon

XP_038441916.1
type: Protein
SIO_000068: ncbiprotein

position:1595614:-1
position: 1595614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1595604-1595614:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1594840-1594994:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1594405-1594525:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1591302-1591413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1591068-1591147:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1590652-1590715:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1589651-1589797:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1588997-1589030:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1587923-1588118:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1586749-1586871:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1583229-1583396:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1582537-1582648:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1581037-1581179:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1579135-1579323:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1577398-1577491:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1577151-1577245:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1576586-1576766:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1575687-1575794:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1574959-1575051:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1574032-1574161:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1572513-1572649:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1568349-1568518:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1567713-1567869:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1567272-1567381:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1566163-1566364:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1565601-1565725:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1564531-1564648:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1562363-1562444:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1561846-1561952:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1560454-1560582:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1559806-1559994:-1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: 1632849..1632921
location: region:1632849-1632921:1
so has part: feature:1632849-1632921:1:exon
subclass of: SO_0000663

111094621
type: Gene
SIO_000068: ncbigene

position:1632849:1
position: 1632849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1632921:1
position: 1632921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1632849-1632921:1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9615
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:1632882..1632884,aa:Lys,seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: 1632849..1632921
location: region:1632849-1632921:1
so has part: feature:1632849-1632921:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1632849-1632921:1:exon

TRNAK-UUU
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: TRNAK-UUU
note: Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
so part of: sequence
location: complement(1633200..1633272)
location: region:1633200-1633272:-1
so has part: feature:1633200-1633272:-1:exon
subclass of: SO_0000663

111094633
type: Gene
SIO_000068: ncbigene

position:1633200:-1
position: 1633200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1633272:-1
position: 1633272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1633200-1633272:-1:exon

TRNAK-UUU
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9615
gene: TRNAK-UUU
product: tRNA-Lys
inference: COORDINATES: profile:tRNAscan-SE:2.0.4
note: transfer RNA lysine (anticodon UUU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
anticodon: (pos:complement(1633237..1633239),aa:Lys, seq:ttt)
SIO_010081: TRNAK-UUU
subclass of: SO_0000673
so part of: TRNAK-UUU
location: complement(1633200..1633272)
location: region:1633200-1633272:-1
so has part: feature:1633200-1633272:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1633200-1633272:-1:exon

MDM4
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1639529..1705937
location: region:1639529-1705937:1
so has part: feature:1639529-1705937:1:exon
subclass of: SO_0000010

478939
type: Gene
SIO_000068: ncbigene

position:1639529:1
position: 1639529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705937:1
position: 1705937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1639529-1705937:1:exon

MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038585992.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686513,1705536..1705937)
location: region:1639529-1705937:1
so has part: feature:1639529-1639670:1:exon
so has part: feature:1657304-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1686513:1:exon
so has part: feature:1705536-1705937:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1639529-1639670:1:exon

position:1639670:1
position: 1639670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1657304-1657416:1:exon

position:1657304:1
position: 1657304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1657416:1
position: 1657416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1658854-1658928:1:exon

position:1658854:1
position: 1658854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1658928:1
position: 1658928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1670975-1671108:1:exon

position:1670975:1
position: 1670975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671108:1
position: 1671108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1672452-1672507:1:exon

position:1672452:1
position: 1672452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

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SIO_000300: 6
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urn:…
SIO_000300: 7
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reference: sequence
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urn:…
SIO_000300: 8
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urn:…
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urn:…
SIO_000300: 10
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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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position:1705536:1
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reference: sequence
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MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038585994.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
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urn:…
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SIO_000300: 12
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position:1695070:1
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reference: sequence
type: ForwardStrandPosition
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MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038585989.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1694088)
location: region:1639529-1694088:1
so has part: feature:1639529-1639670:1:exon
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position:1694088:1
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reference: sequence
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 11
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MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 23 samples with support for all annotated introns
transcript id: XM_038585995.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686513,1690730..1694088)
location: region:1639529-1694088:1
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urn:…
SIO_000300: 1
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SIO_000300: 8
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SIO_000300: 9
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SIO_000300: 10
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SIO_000300: 11
SIO_000628: feature:1686464-1686513:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1690730-1694088:1:exon

position:1690730:1
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reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_038585996.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686513,1691668..1694088)
location: region:1639529-1694088:1
so has part: feature:1639529-1639670:1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 12
SIO_000628: feature:1691668-1694088:1:exon

position:1691668:1
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reference: sequence
type: ForwardStrandPosition
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MDM4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_005385570.1
SIO_010081: MDM4
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677564..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686730)
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position:1686730:1
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reference: sequence
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urn:…
SIO_000300: 1
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reference: sequence
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urn:…
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SIO_000300: 11
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MDM4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XR_005385571.1
SIO_010081: MDM4
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686730)
location: region:1639529-1686730:1
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urn:…
SIO_000300: 1
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SIO_000300: 2
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SIO_000300: 4
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urn:…
SIO_000300: 10
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MDM4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XR_005385569.1
SIO_010081: MDM4
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1682241..1682390,1684288..1684368)
location: region:1639529-1684368:1
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urn:…
SIO_000300: 1
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SIO_000300: 2
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urn:…
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MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038585997.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677564..1677602,1678341..1678440,1682241..1682374)
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position:1682374:1
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reference: sequence
type: ForwardStrandPosition
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 28 samples with support for all annotated introns
transcript id: XM_038585998.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1639529..1639670,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1678341..1678440,1682241..1682374)
location: region:1639529-1682374:1
so has part: feature:1639529-1639670:1:exon
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so has part: feature:1672452-1672507:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1682241-1682374:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1639529-1639670:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1657304-1657416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1682241-1682374:1:exon

MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038585990.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1640122..1640263,1657304..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1694088)
location: region:1640122-1694088:1
so has part: feature:1640122-1640263:1:exon
so has part: feature:1657304-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1694088:1:exon

position:1640122:1
position: 1640122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1640122-1640263:1:exon

position:1640263:1
position: 1640263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1657304-1657416:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1677535-1677602:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686464-1694088:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X3
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTDAAQTLALAQDHSMDIPSQDQLKQSAEESSSSRKRMEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRHREREREAETQAEGEAGSMQGARRGTLSRVSRSGPGLKAAPNR
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686513,1705536..1705668)
location: region:1657339-1705668:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1686513:1:exon
so has part: feature:1705536-1705668:1:exon

XP_038441920.1
type: Protein
SIO_000068: ncbiprotein

position:1657339:1
position: 1657339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1705668:1
position: 1705668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677535-1677602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686464-1686513:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1705536-1705668:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X5
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTDAAQTLALAQDHSMDIPSQDQLKQSAEESSSSRKRMEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRFCSVEGY
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686513,1695070..1695094)
location: region:1657339-1695094:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1686513:1:exon
so has part: feature:1695070-1695094:1:exon

XP_038441922.1
type: Protein
SIO_000068: ncbiprotein

position:1695094:1
position: 1695094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677535-1677602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686464-1686513:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1695070-1695094:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X7
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTDAAQTLALAQDHSMDIPSQDQLKQSAEESSSSRKRMEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRVM
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686513,1691668..1691677)
location: region:1657339-1691677:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1686513:1:exon
so has part: feature:1691668-1691677:1:exon

XP_038441924.1
type: Protein
SIO_000068: ncbiprotein

position:1691677:1
position: 1691677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677535-1677602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686464-1686513:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1691668-1691677:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X6
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTDAAQTLALAQDHSMDIPSQDQLKQSAEESSSSRKRMEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRCLS
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1686513,1690730..1690742)
location: region:1657339-1690742:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1686513:1:exon
so has part: feature:1690730-1690742:1:exon

XP_038441923.1
type: Protein
SIO_000068: ncbiprotein

position:1690742:1
position: 1690742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677535-1677602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686464-1686513:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1690730-1690742:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X1
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTDAAQTLALAQDHSMDIPSQDQLKQSAEESSSSRKRMEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKKENEGIDVPDCRRTISAPVVRPKDVCTKEEKNPKLFDPCNSVEFLDLAHSSESQETISSMGEPSDNLFEQRTDTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1687039)
location: region:1657339-1687039:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1687039:1:exon

XP_038441917.1
type: Protein
SIO_000068: ncbiprotein

position:1687039:1
position: 1687039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677535-1677602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686464-1687039:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X1
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTDAAQTLALAQDHSMDIPSQDQLKQSAEESSSSRKRMEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKKENEGIDVPDCRRTISAPVVRPKDVCTKEEKNPKLFDPCNSVEFLDLAHSSESQETISSMGEPSDNLFEQRTDTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677535..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1687039)
location: region:1657339-1687039:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677535-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1687039:1:exon

XP_038441918.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677535-1677602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686464-1687039:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X8
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTGSQYGYSKSRPTEAKCRRKLQFQEKNGRRQYSYTAYLTT
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1677564..1677602,1678341..1678420)
location: region:1657339-1678420:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677564-1677602:1:exon
so has part: feature:1678341-1678420:1:exon

XP_038441925.1
type: Protein
SIO_000068: ncbiprotein

position:1678420:1
position: 1678420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1677564-1677602:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1678341-1678420:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X9
translation: MTSFATSAQCSTSDSACRISPEQTNQVRPKLPLLKILQAAGAQGEMFTVKEVMHYLGQYIMVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRRNLVTLATATTAKCRRKLQFQEKNGRRQYSYTAYLTT
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1657339..1657416,1658854..1658928,1670975..1671108,1672452..1672507,1678341..1678420)
location: region:1657339-1678420:1
so has part: feature:1657339-1657416:1:exon
so has part: feature:1658854-1658928:1:exon
so has part: feature:1670975-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1678341-1678420:1:exon

XP_038441926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1657339-1657416:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1658854-1658928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1670975-1671108:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1678341-1678420:1:exon

MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038585993.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1671026..1671108,1672452..1672507,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1694088)
location: region:1671026-1694088:1
so has part: feature:1671026-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1694088:1:exon

position:1671026:1
position: 1671026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671026-1671108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1686464-1694088:1:exon

MDM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MDM4
product: MDM4 regulator of p53, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_038585991.1
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1671053..1671108,1672452..1672507,1677564..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1694088)
location: region:1671053-1694088:1
so has part: feature:1671053-1671108:1:exon
so has part: feature:1672452-1672507:1:exon
so has part: feature:1677564-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1694088:1:exon

position:1671053:1
position: 1671053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671053-1671108:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1672452-1672507:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1677564-1677602:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1686464-1694088:1:exon

LOC119868102
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119868102
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1674466..1674553)
location: region:1674466-1674553:-1
so has part: feature:1674466-1674553:-1:exon

119868102
type: Gene
SIO_000068: ncbigene

position:1674466:-1
position: 1674466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674553:-1
position: 1674553
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1674466-1674553:-1:exon

LOC119868102
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119868102
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119868102
subclass of: SO_0000673
so part of: LOC119868102
location: complement(1674466..1674553)
location: region:1674466-1674553:-1
so has part: feature:1674466-1674553:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1674466-1674553:-1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X2
translation: MDIPSQDQLKQSAEESSSSRKRMEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKKENEGIDVPDCRRTISAPVVRPKDVCTKEEKNPKLFDPCNSVEFLDLAHSSESQETISSMGEPSDNLFEQRTDTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1677573..1677602,1678341..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1687039)
location: region:1677573-1687039:1
so has part: feature:1677573-1677602:1:exon
so has part: feature:1678341-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1687039:1:exon

XP_038441919.1
type: Protein
SIO_000068: ncbiprotein

position:1677573:1
position: 1677573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1677573-1677602:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1678341-1678440:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1686464-1687039:1:exon

MDM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MDM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Mdm4 isoform X4
translation: MEEGNIPTLPTSQHKCRNSREDEDFIKNLTQDETSKLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQDIGTAIVSDTTDDLWFLNESVSEQFGVGIKVEAADTEQTSEEVGKVRDKKVIEVGKNDDLEDSKSISDDTDVEVTSEDEWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIPEKKENEGIDVPDCRRTISAPVVRPKDVCTKEEKNPKLFDPCNSVEFLDLAHSSESQETISSMGEPSDNLFEQRTDTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA
SIO_010081: MDM4
subclass of: SO_0000673
so part of: MDM4
location: join(1678377..1678440,1680620..1680780,1682241..1682390,1684288..1684368,1686464..1687039)
location: region:1678377-1687039:1
so has part: feature:1678377-1678440:1:exon
so has part: feature:1680620-1680780:1:exon
so has part: feature:1682241-1682390:1:exon
so has part: feature:1684288-1684368:1:exon
so has part: feature:1686464-1687039:1:exon

XP_038441921.1
type: Protein
SIO_000068: ncbiprotein

position:1678377:1
position: 1678377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1678377-1678440:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1680620-1680780:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1682241-1682390:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1684288-1684368:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1686464-1687039:1:exon

LOC119868010
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119868010
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1709946..1715080
location: region:1709946-1715080:1
so has part: feature:1709946-1715080:1:exon
subclass of: SO_0000011

119868010
type: Gene
SIO_000068: ncbigene

position:1709946:1
position: 1709946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1715080:1
position: 1715080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1709946-1715080:1:exon

LOC119868010
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119868010
product: uncharacterized LOC119868010
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385498.1
SIO_010081: LOC119868010
subclass of: SO_0000673
so part of: LOC119868010
location: join(1709946..1711526,1712028..1712136,1715025..1715080)
location: region:1709946-1715080:1
so has part: feature:1709946-1711526:1:exon
so has part: feature:1712028-1712136:1:exon
so has part: feature:1715025-1715080:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1709946-1711526:1:exon

position:1711526:1
position: 1711526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1712028-1712136:1:exon

position:1712028:1
position: 1712028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1712136:1
position: 1712136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1715025-1715080:1:exon

position:1715025:1
position: 1715025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LRRN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1747852..1809364)
location: region:1747852-1809364:-1
so has part: feature:1747852-1809364:-1:exon
subclass of: SO_0000010

488564
type: Gene
SIO_000068: ncbigene

position:1747852:-1
position: 1747852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1809364:-1
position: 1809364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1747852-1809364:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038586003.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1747852-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1747852-1750886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

position:1809306:-1
position: 1809306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

position:1801122:-1
position: 1801122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801321:-1
position: 1801321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

position:1800844:-1
position: 1800844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1801039:-1
position: 1801039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1747852-1750886:-1:exon

position:1750886:-1
position: 1750886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038586000.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1771653..1771773,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1747852-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1747852-1750886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1771653-1771773:-1:exon

position:1771653:-1
position: 1771653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771773:-1
position: 1771773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038586002.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1771653..1771773,1779880..1780068,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1747852-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1779880-1780068:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1747852-1750886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1779880-1780068:-1:exon

position:1779880:-1
position: 1779880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1780068:-1
position: 1780068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038586001.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1747852-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1747852-1750886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

position:1798460:-1
position: 1798460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1798658:-1
position: 1798658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038585999.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1747852-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1747852-1750886:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038586004.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1771653..1771773,1798460..1798658,1800844..1801039,1809306..1809353))
location: region:1747852-1809353:-1
so has part: feature:1809306-1809353:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1747852-1750886:-1:exon

position:1809353:-1
position: 1809353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809353:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_038586007.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1809306..1809349))
location: region:1747852-1809349:-1
so has part: feature:1809306-1809349:-1:exon
so has part: feature:1747852-1750886:-1:exon

position:1809349:-1
position: 1809349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809349:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038586006.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1771653..1771773,1809306..1809338))
location: region:1747852-1809338:-1
so has part: feature:1809306-1809338:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1747852-1750886:-1:exon

position:1809338:-1
position: 1809338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809338:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038586005.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1771653..1771773,1798460..1798658,1809306..1809324))
location: region:1747852-1809324:-1
so has part: feature:1809306-1809324:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1747852-1750886:-1:exon

position:1809324:-1
position: 1809324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809324:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038586008.1
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(join(1747852..1750886,1769111..1769247))
location: region:1747852-1769247:-1
so has part: feature:1769111-1769247:-1:exon
so has part: feature:1747852-1750886:-1:exon

position:1769247:-1
position: 1769247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1769111-1769247:-1:exon

position:1769111:-1
position: 1769111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1747852-1750886:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441927.1
type: Protein
SIO_000068: ncbiprotein

position:1748530:-1
position: 1748530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750668:-1
position: 1750668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441928.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441931.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441932.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441933.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441934.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LRRN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: leucine-rich repeat neuronal protein 2
translation: MRLLVAPLLLAWVASATAAVPVVPWRVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPGLPAGTQTLLLQSNSIMRVDQSELNYLANLTELDLSQNSFSDARDCDFRALPRLLSLHLEENRLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFAGLGNLLRLHLNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAFHHLPQMETLMLNNNALSALHQQTVESLPNLQEVGLHGNPIRCDCVIRWANATGTRVRFIEPQSTLCAEPPDLQRRPVREVPFREMTDHCLPLISPRSFPPSLQVASGDSLALHCRALAEPEPEIYWVTPAGVRLTAARAGRKYRVYPEGTLELRRVTAEEAGLYTCVAQNLVGADSKTVSVAVGQAPLQPGRDKGWGLELRVQETHPYHILLSWVPPPNTVSTNLTWSSASSLRGQGAPALARLPRGTHSYNITRLLQATEYWACLQVAFADAHTQLACVWTRTKEATPCHRALGDRPGLIAILALAVLLLAAGLAAHLGTGQPRQGVGGRALLPAWAFWGWSTPSVRVVSAPLVLPWNPGRKLSRSSEGEMLSPPLLQNS
SIO_010081: LRRN2
subclass of: SO_0000673
so part of: LRRN2
location: complement(1748530..1750668)
location: region:1748530-1750668:-1
so has part: feature:1748530-1750668:-1:exon

XP_038441936.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1748530-1750668:-1:exon

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X13
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005385575.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770870,1771017..1771160,1771653..1771773,1779880..1780068,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1779880-1780068:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1771017-1771160:-1:exon
so has part: feature:1769915-1770870:-1:exon

position:1769915:-1
position: 1769915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1779880-1780068:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771017-1771160:-1:exon

position:1771017:-1
position: 1771017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1771160:-1
position: 1771160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1769915-1770870:-1:exon

position:1770870:-1
position: 1770870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005385577.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770870,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1769915-1770870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1769915-1770870:-1:exon

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 17 samples with support for all annotated introns
transcript id: XR_005385576.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770996,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1769915-1770996:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1769915-1770996:-1:exon

position:1770996:-1
position: 1770996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XR_005385580.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770589,1771017..1771160,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1771017-1771160:-1:exon
so has part: feature:1769915-1770589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771017-1771160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1769915-1770589:-1:exon

position:1770589:-1
position: 1770589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005385578.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770586,1770716..1770870,1771017..1771160,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1771017-1771160:-1:exon
so has part: feature:1770716-1770870:-1:exon
so has part: feature:1769915-1770586:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771017-1771160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1770716-1770870:-1:exon

position:1770716:-1
position: 1770716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1769915-1770586:-1:exon

position:1770586:-1
position: 1770586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005385579.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770589,1770716..1770870,1771017..1771160,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1771017-1771160:-1:exon
so has part: feature:1770716-1770870:-1:exon
so has part: feature:1769915-1770589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771017-1771160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1770716-1770870:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1769915-1770589:-1:exon

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 18 samples with support for all annotated introns
transcript id: XR_005385573.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770870,1771017..1771160,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1771017-1771160:-1:exon
so has part: feature:1769915-1770870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771017-1771160:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1769915-1770870:-1:exon

LRRN2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LRRN2
product: leucine rich repeat neuronal 2, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005385574.1
SIO_010081: LRRN2
so part of: LRRN2
location: complement(join(1769915..1770870,1771017..1771184,1771653..1771773,1798460..1798658,1800844..1801039,1801122..1801321,1809306..1809364))
location: region:1769915-1809364:-1
so has part: feature:1809306-1809364:-1:exon
so has part: feature:1801122-1801321:-1:exon
so has part: feature:1800844-1801039:-1:exon
so has part: feature:1798460-1798658:-1:exon
so has part: feature:1771653-1771773:-1:exon
so has part: feature:1771017-1771184:-1:exon
so has part: feature:1769915-1770870:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1809306-1809364:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1801122-1801321:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1800844-1801039:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1798460-1798658:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1771653-1771773:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1771017-1771184:-1:exon

position:1771184:-1
position: 1771184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1769915-1770870:-1:exon

LOC100685187
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100685187
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1939866..1940572)
location: region:1939866-1940572:-1
so has part: feature:1939866-1940572:-1:exon

100685187
type: Gene
SIO_000068: ncbigene

position:1939866:-1
position: 1939866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940572:-1
position: 1940572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1939866-1940572:-1:exon

LOC100685187
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685187
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100685187
subclass of: SO_0000673
so part of: LOC100685187
location: complement(1939866..1940572)
location: region:1939866-1940572:-1
so has part: feature:1939866-1940572:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1939866-1940572:-1:exon

NFASC
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: NFASC
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1951355..2128798
location: region:1951355-2128798:1
so has part: feature:1951355-2128798:1:exon
subclass of: SO_0000010

488565
type: Gene
SIO_000068: ncbigene

position:1951355:1
position: 1951355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2128798:1
position: 2128798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1951355-2128798:1:exon

NFASC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: NFASC
product: neurofascin, transcript variant X5
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038586009.1
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(1951355..1951425,2037062..2037167,2059009..2059189,2065923..2066028,2067102..2067298,2067741..2067863,2070933..2071103,2075374..2075424,2081833..2081944,2082350..2082534,2084055..2084186,2086358..2086501,2087358..2087469,2087771..2087937,2088428..2088576,2089770..2089894,2090796..2090840,2092043..2092144,2092446..2092643,2093429..2093499,2094793..2095015,2096844..2096959,2098658..2098862,2100047..2100169,2101215..2101388,2103805..2103819,2109154..2109378,2112934..2113050,2114342..2114494,2121438..2121569,2123552..2123621,2126738..2128798)
location: region:1951355-2128798:1
so has part: feature:1951355-1951425:1:exon
so has part: feature:2037062-2037167:1:exon
so has part: feature:2059009-2059189:1:exon
so has part: feature:2065923-2066028:1:exon
so has part: feature:2067102-2067298:1:exon
so has part: feature:2067741-2067863:1:exon
so has part: feature:2070933-2071103:1:exon
so has part: feature:2075374-2075424:1:exon
so has part: feature:2081833-2081944:1:exon
so has part: feature:2082350-2082534:1:exon
so has part: feature:2084055-2084186:1:exon
so has part: feature:2086358-2086501:1:exon
so has part: feature:2087358-2087469:1:exon
so has part: feature:2087771-2087937:1:exon
so has part: feature:2088428-2088576:1:exon
so has part: feature:2089770-2089894:1:exon
so has part: feature:2090796-2090840:1:exon
so has part: feature:2092043-2092144:1:exon
so has part: feature:2092446-2092643:1:exon
so has part: feature:2093429-2093499:1:exon
so has part: feature:2094793-2095015:1:exon
so has part: feature:2096844-2096959:1:exon
so has part: feature:2098658-2098862:1:exon
so has part: feature:2100047-2100169:1:exon
so has part: feature:2101215-2101388:1:exon
so has part: feature:2103805-2103819:1:exon
so has part: feature:2109154-2109378:1:exon
so has part: feature:2112934-2113050:1:exon
so has part: feature:2114342-2114494:1:exon
so has part: feature:2121438-2121569:1:exon
so has part: feature:2123552-2123621:1:exon
so has part: feature:2126738-2128798:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1951355-1951425:1:exon

position:1951425:1
position: 1951425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2037062-2037167:1:exon

position:2037062:1
position: 2037062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2037167:1
position: 2037167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2059009-2059189:1:exon

position:2059009:1
position: 2059009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2059189:1
position: 2059189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2065923-2066028:1:exon

position:2065923:1
position: 2065923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2066028:1
position: 2066028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2067102-2067298:1:exon

position:2067102:1
position: 2067102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067298:1
position: 2067298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2067741-2067863:1:exon

position:2067741:1
position: 2067741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2067863:1
position: 2067863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2070933-2071103:1:exon

position:2070933:1
position: 2070933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2071103:1
position: 2071103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2075374-2075424:1:exon

position:2075374:1
position: 2075374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2075424:1
position: 2075424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2081833-2081944:1:exon

position:2081833:1
position: 2081833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2081944:1
position: 2081944
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2082350-2082534:1:exon

position:2082350:1
position: 2082350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2082534:1
position: 2082534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2084055-2084186:1:exon

position:2084055:1
position: 2084055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2084186:1
position: 2084186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2086358-2086501:1:exon

position:2086358:1
position: 2086358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2086501:1
position: 2086501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2087358-2087469:1:exon

position:2087358:1
position: 2087358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087469:1
position: 2087469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2087771-2087937:1:exon

position:2087771:1
position: 2087771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2087937:1
position: 2087937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2088428-2088576:1:exon

position:2088428:1
position: 2088428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2088576:1
position: 2088576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2089770-2089894:1:exon

position:2089770:1
position: 2089770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2089894:1
position: 2089894
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2090796-2090840:1:exon

position:2090796:1
position: 2090796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2090840:1
position: 2090840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2092043-2092144:1:exon

position:2092043:1
position: 2092043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092144:1
position: 2092144
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2092446-2092643:1:exon

position:2092446:1
position: 2092446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2092643:1
position: 2092643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2093429-2093499:1:exon

position:2093429:1
position: 2093429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2093499:1
position: 2093499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2094793-2095015:1:exon

position:2094793:1
position: 2094793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2095015:1
position: 2095015
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2096844-2096959:1:exon

position:2096844:1
position: 2096844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2096959:1
position: 2096959
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2098658-2098862:1:exon

position:2098658:1
position: 2098658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2098862:1
position: 2098862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2100047-2100169:1:exon

position:2100047:1
position: 2100047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2100169:1
position: 2100169
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2101215-2101388:1:exon

position:2101215:1
position: 2101215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2101388:1
position: 2101388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:2103805-2103819:1:exon

position:2103805:1
position: 2103805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2103819:1
position: 2103819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:2109154-2109378:1:exon

position:2109154:1
position: 2109154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109378:1
position: 2109378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:2112934-2113050:1:exon

position:2112934:1
position: 2112934
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113050:1
position: 2113050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:2114342-2114494:1:exon

position:2114342:1
position: 2114342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2114494:1
position: 2114494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:2121438-2121569:1:exon

position:2121438:1
position: 2121438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2121569:1
position: 2121569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:2123552-2123621:1:exon

position:2123552:1
position: 2123552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2123621:1
position: 2123621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:2126738-2128798:1:exon

position:2126738:1
position: 2126738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

NFASC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: NFASC
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: neurofascin isoform X2
translation: MARQPPPPSVHAAILLCLLSLSGAIEIPMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRKSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNAFTLKVLTNNPYNDSSLRNHPDMYSARGVAERTPSFMYPQGTASSQMVLRGTDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKFPGSVNSAILQLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPADVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNATVWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYPDTVQGQLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRPRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEFTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGTKLGKQIVENFSPNQTKFTMQRADPVSRYRFTLSARTQVGSGEAVTEESPAPPNEATPTAAPPTLPPTTVSVTGVVSSTDATATAATTEATTVPTIPSVAPTTMATTTVATTTTTAATTMERPPTTTSETKMPESAPDRQSIWNVTVLPNSKWANITWRHNLGPGTAFVVEYIDSNHTKKTVPVKSQVQPVQLTDLYPGMTYTLRVYSRDKEGISSTVITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
SIO_010081: NFASC
subclass of: SO_0000673
so part of: NFASC
location: join(2059099..2059189,2065923..2066028,2067102..2067298,2067741..2067863,2070933..2071103,2075374..2075424,2081833..2081944,2082350..2082534,2084055..2084186,2086358..2086501,2087358..2087469,2087771..2087937,2088428..2088576,2089770..2089894,2090796..2090840,2092043..2092144,2092446..2092643,2093429..2093499,2094793..2095015,2096844..2096959,2098658..2098862,2100047..2100169,2101215..2101388,2103805..2103819,2109154..2109378,2112934..2113050,2114342..2114494,2121438..2121569,2123552..2123621,2126738..2126969)
location: region:2059099-2126969:1
so has part: feature:2059099-2059189:1:exon
so has part: feature:2065923-2066028:1:exon
so has part: feature:2067102-2067298:1:exon
so has part: feature:2067741-2067863:1:exon
so has part: feature:2070933-2071103:1:exon
so has part: feature:2075374-2075424:1:exon
so has part: feature:2081833-2081944:1:exon
so has part: feature:2082350-2082534:1:exon
so has part: feature:2084055-2084186:1:exon
so has part: feature:2086358-2086501:1:exon
so has part: feature:2087358-2087469:1:exon
so has part: feature:2087771-2087937:1:exon
so has part: feature:2088428-2088576:1:exon
so has part: feature:2089770-2089894:1:exon
so has part: feature:2090796-2090840:1:exon
so has part: feature:2092043-2092144:1:exon
so has part: feature:2092446-2092643:1:exon
so has part: feature:2093429-2093499:1:exon
so has part: feature:2094793-2095015:1:exon
so has part: feature:2096844-2096959:1:exon
so has part: feature:2098658-2098862:1:exon
so has part: feature:2100047-2100169:1:exon
so has part: feature:2101215-2101388:1:exon
so has part: feature:2103805-2103819:1:exon
so has part: feature:2109154-2109378:1:exon
so has part: feature:2112934-2113050:1:exon
so has part: feature:2114342-2114494:1:exon
so has part: feature:2121438-2121569:1:exon
so has part: feature:2123552-2123621:1:exon
so has part: feature:2126738-2126969:1:exon

XP_038441937.1
type: Protein
SIO_000068: ncbiprotein

position:2059099:1
position: 2059099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2126969:1
position: 2126969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2059099-2059189:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2065923-2066028:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2067102-2067298:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2067741-2067863:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2070933-2071103:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2075374-2075424:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2081833-2081944:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2082350-2082534:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2084055-2084186:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2086358-2086501:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2087358-2087469:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2087771-2087937:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2088428-2088576:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2089770-2089894:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2090796-2090840:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2092043-2092144:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2092446-2092643:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2093429-2093499:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2094793-2095015:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2096844-2096959:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2098658-2098862:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2100047-2100169:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2101215-2101388:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2103805-2103819:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2109154-2109378:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:2112934-2113050:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:2114342-2114494:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:2121438-2121569:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:2123552-2123621:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:2126738-2126969:1:exon

LOC111094590
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094590
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2097562..2103008)
location: region:2097562-2103008:-1
so has part: feature:2097562-2103008:-1:exon
subclass of: SO_0000011

111094590
type: Gene
SIO_000068: ncbigene

position:2097562:-1
position: 2097562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2103008:-1
position: 2103008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2097562-2103008:-1:exon

LOC111094590
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094590
product: uncharacterized LOC111094590
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005385581.1
SIO_010081: LOC111094590
subclass of: SO_0000673
so part of: LOC111094590
location: complement(join(2097562..2097754,2101201..2101343,2102879..2103008))
location: region:2097562-2103008:-1
so has part: feature:2102879-2103008:-1:exon
so has part: feature:2101201-2101343:-1:exon
so has part: feature:2097562-2097754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2102879-2103008:-1:exon

position:2102879:-1
position: 2102879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2101201-2101343:-1:exon

position:2101201:-1
position: 2101201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2101343:-1
position: 2101343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2097562-2097754:-1:exon

position:2097754:-1
position: 2097754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CNTN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: CNTN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2151770..2184597
location: region:2151770-2184597:1
so has part: feature:2151770-2184597:1:exon
subclass of: SO_0000010

100685268
type: Gene
SIO_000068: ncbigene

position:2151770:1
position: 2151770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2184597:1
position: 2184597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2151770-2184597:1:exon

CNTN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: CNTN2
product: contactin 2, transcript variant X2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 10 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038586010.1
SIO_010081: CNTN2
subclass of: SO_0000673
so part of: CNTN2
location: join(2151770..2151906,2161139..2161294,2165444..2165588,2165722..2165897,2166063..2166158,2166506..2166715,2167003..2167103,2168533..2168708,2169130..2169266,2169720..2169849,2171236..2171386,2171513..2171640,2172168..2172343,2172866..2172986,2173483..2173641,2174049..2174198,2176260..2176330,2177038..2177272,2177736..2177848,2178790..2178976,2179309..2179421,2179832..2180000,2180429..2184597)
location: region:2151770-2184597:1
so has part: feature:2151770-2151906:1:exon
so has part: feature:2161139-2161294:1:exon
so has part: feature:2165444-2165588:1:exon
so has part: feature:2165722-2165897:1:exon
so has part: feature:2166063-2166158:1:exon
so has part: feature:2166506-2166715:1:exon
so has part: feature:2167003-2167103:1:exon
so has part: feature:2168533-2168708:1:exon
so has part: feature:2169130-2169266:1:exon
so has part: feature:2169720-2169849:1:exon
so has part: feature:2171236-2171386:1:exon
so has part: feature:2171513-2171640:1:exon
so has part: feature:2172168-2172343:1:exon
so has part: feature:2172866-2172986:1:exon
so has part: feature:2173483-2173641:1:exon
so has part: feature:2174049-2174198:1:exon
so has part: feature:2176260-2176330:1:exon
so has part: feature:2177038-2177272:1:exon
so has part: feature:2177736-2177848:1:exon
so has part: feature:2178790-2178976:1:exon
so has part: feature:2179309-2179421:1:exon
so has part: feature:2179832-2180000:1:exon
so has part: feature:2180429-2184597:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2151770-2151906:1:exon

position:2151906:1
position: 2151906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2161139-2161294:1:exon

position:2161139:1
position: 2161139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2161294:1
position: 2161294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2165444-2165588:1:exon

position:2165444:1
position: 2165444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2165588:1
position: 2165588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2165722-2165897:1:exon

position:2165722:1
position: 2165722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2165897:1
position: 2165897
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2166063-2166158:1:exon

position:2166063:1
position: 2166063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166158:1
position: 2166158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2166506-2166715:1:exon

position:2166506:1
position: 2166506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2166715:1
position: 2166715
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2167003-2167103:1:exon

position:2167003:1
position: 2167003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2167103:1
position: 2167103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2168533-2168708:1:exon

position:2168533:1
position: 2168533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2168708:1
position: 2168708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2169130-2169266:1:exon

position:2169130:1
position: 2169130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2169266:1
position: 2169266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2169720-2169849:1:exon

position:2169720:1
position: 2169720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2169849:1
position: 2169849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2171236-2171386:1:exon

position:2171236:1
position: 2171236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2171386:1
position: 2171386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2171513-2171640:1:exon

position:2171513:1
position: 2171513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2171640:1
position: 2171640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2172168-2172343:1:exon

position:2172168:1
position: 2172168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172343:1
position: 2172343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2172866-2172986:1:exon

position:2172866:1
position: 2172866
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2172986:1
position: 2172986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2173483-2173641:1:exon

position:2173483:1
position: 2173483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2173641:1
position: 2173641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2174049-2174198:1:exon

position:2174049:1
position: 2174049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2174198:1
position: 2174198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2176260-2176330:1:exon

position:2176260:1
position: 2176260
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2176330:1
position: 2176330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2177038-2177272:1:exon

position:2177038:1
position: 2177038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177272:1
position: 2177272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2177736-2177848:1:exon

position:2177736:1
position: 2177736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2177848:1
position: 2177848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2178790-2178976:1:exon

position:2178790:1
position: 2178790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2178976:1
position: 2178976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2179309-2179421:1:exon

position:2179309:1
position: 2179309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2179421:1
position: 2179421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2179832-2180000:1:exon

position:2179832:1
position: 2179832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180000:1
position: 2180000
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2180429-2184597:1:exon

position:2180429:1
position: 2180429
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CNTN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: CNTN2
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: contactin-2 isoform X1
translation: MGTPTRRKAHLLLLVAVVLVSSPARSSPRGSPATFGPVFEDQPLGLLFPEESTEEKVTLACRARASPPATYRWKMNGTEMKLAPGSRHQLVGGNLVILNPSKAQDAGVYQCLASNPVGTVVSREAVLRFGFLQEFSKEERDPVKTHEGWGVMLPCNPPAHYPGLSYRWLLNEFPNFIPTDGRHFVSQTTGNLYIARTNASDLGNYSCLATSHMDFSTKSVFSKFAQLNLAAEDTRLFAPSIKARFPAETYALVGQQVTLECFAFGNPVPQIKWRKVDGSLSPQWATAEPTLQIPSISFEDEGTYECEAENSKGRDTVQGRIIVQAQPEWLKVISDMEADIGSNLRWGCAAAGKPRPTVRWLRNGEPLTSQSRVEVLAGDLRFSKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVKRLIPAARGGEIAIPCQPRAAPKAVVLWSKGTEILVNSSRVTVTPDGTLIIRNISRSDEGKYTCFAENFMGKANSTGILSVRDATKITLAPSSADINLGDSLTLQCHASHDPTMDLTFIWTLDDFPIDFDKPGGHYRRASAKETVGDLTILNAQLRHGGKYTCMAQTVVDSASKEATVLVRGPPGPPGGVVVRNIGDTTVQLSWSRGFDNHSPIAKYTLQARTPPAGKWKQVRTNPANIEGNAETAQVLGLTPWMDYEFRVVASNILGTGEPSGPSSKIRTKEAAPSVAPSGLSGGGGAPGELILNWTPVPREYQNGDGFGYLLSFRRQGGSGWQTARVPGADAQHFVYSNDSVRPYTPFEVKIRSYNRRGDGPESLTALVHSAEEEPRVAPTKVWAKGVSSSEMNVTWEPVQQDMNGILLGYEIRYWKAGDKEAAADRVRTAGLDTSARVTGLHPDTKYHVTIRAYNRAGTGPTSPSANATTMKPPPQRPPDNISWTFSSSTLSIKWDPVVPFRNESAVTGYKMLYQNDLHPTPTLHLTSRNWIDIAVPEDIGHALVQIRTTGPGGDGIPAEVHIVRNGGTSMMVENSAVSPAPHPSAILSPPVVMLLLAGYLGL
SIO_010081: CNTN2
subclass of: SO_0000673
so part of: CNTN2
location: join(2161225..2161294,2165444..2165588,2165722..2165897,2166063..2166158,2166506..2166715,2167003..2167103,2168533..2168708,2169130..2169266,2169720..2169849,2171236..2171386,2171513..2171640,2172168..2172343,2172866..2172986,2173483..2173641,2174049..2174198,2176260..2176330,2177038..2177272,2177736..2177848,2178790..2178976,2179309..2179421,2179832..2180000,2180429..2180538)
location: region:2161225-2180538:1
so has part: feature:2161225-2161294:1:exon
so has part: feature:2165444-2165588:1:exon
so has part: feature:2165722-2165897:1:exon
so has part: feature:2166063-2166158:1:exon
so has part: feature:2166506-2166715:1:exon
so has part: feature:2167003-2167103:1:exon
so has part: feature:2168533-2168708:1:exon
so has part: feature:2169130-2169266:1:exon
so has part: feature:2169720-2169849:1:exon
so has part: feature:2171236-2171386:1:exon
so has part: feature:2171513-2171640:1:exon
so has part: feature:2172168-2172343:1:exon
so has part: feature:2172866-2172986:1:exon
so has part: feature:2173483-2173641:1:exon
so has part: feature:2174049-2174198:1:exon
so has part: feature:2176260-2176330:1:exon
so has part: feature:2177038-2177272:1:exon
so has part: feature:2177736-2177848:1:exon
so has part: feature:2178790-2178976:1:exon
so has part: feature:2179309-2179421:1:exon
so has part: feature:2179832-2180000:1:exon
so has part: feature:2180429-2180538:1:exon

XP_038441938.1
type: Protein
SIO_000068: ncbiprotein

position:2161225:1
position: 2161225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2180538:1
position: 2180538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2161225-2161294:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2165444-2165588:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2165722-2165897:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2166063-2166158:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2166506-2166715:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2167003-2167103:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2168533-2168708:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2169130-2169266:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2169720-2169849:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2171236-2171386:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2171513-2171640:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2172168-2172343:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2172866-2172986:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2173483-2173641:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2174049-2174198:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2176260-2176330:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2177038-2177272:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2177736-2177848:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2178790-2178976:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2179309-2179421:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2179832-2180000:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2180429-2180538:1:exon

TMEM81
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: TMEM81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2188141..2190678)
location: region:2188141-2190678:-1
so has part: feature:2188141-2190678:-1:exon
subclass of: SO_0000010

100855978
type: Gene
SIO_000068: ncbigene

position:2188141:-1
position: 2188141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2190678:-1
position: 2190678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2188141-2190678:-1:exon

TMEM81
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM81
product: transmembrane protein 81
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038586014.1
SIO_010081: TMEM81
subclass of: SO_0000673
so part of: TMEM81
location: complement(2188141..2190678)
location: region:2188141-2190678:-1
so has part: feature:2188141-2190678:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2188141-2190678:-1:exon

TMEM81
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM81
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 81
translation: MRNSATGFLLGSLALAFCLPLVVASLETLAIPKRLQQAVGRVIVHTTTCTVTCGLGYKEETVCEVGPDGVRRKCTFQRLECLTNWICGMLHFTVVLGRRFQLSCLSSDILAVGKEAFRFTWRFARGIISTDDEIFKPFQVDSHFVRFESVQEYDAGTYRCDVQMLKNFRFVKRLYFGLRVLPSNLVNLNFHQSLTENQKLVDKGLEVNLDNGSKPYHPWKKTVAVAVGIGMASGMVGAVLVIIALGSGLRKINSGAGLESLKALLLKGWLPRTLDRLFRKPS
SIO_010081: TMEM81
subclass of: SO_0000673
so part of: TMEM81
location: complement(2188479..2189327)
location: region:2188479-2189327:-1
so has part: feature:2188479-2189327:-1:exon

XP_038441942.1
type: Protein
SIO_000068: ncbiprotein

position:2188479:-1
position: 2188479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2189327:-1
position: 2189327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2188479-2189327:-1:exon

RBBP5
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2190823..2230308)
location: region:2190823-2230308:-1
so has part: feature:2190823-2230308:-1:exon
subclass of: SO_0000010

488568
type: Gene
SIO_000068: ncbigene

position:2190823:-1
position: 2190823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230308:-1
position: 2230308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2190823-2230308:-1:exon

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038586012.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(2190823..2192873,2198490..2198681,2199736..2199965,2200366..2200435,2201993..2202110,2202718..2202789,2202883..2203036,2203125..2203244,2204297..2204406,2206803..2206965,2208107..2208247,2217227..2217399,2218242..2218267,2229956..2230308))
location: region:2190823-2230308:-1
so has part: feature:2229956-2230308:-1:exon
so has part: feature:2218242-2218267:-1:exon
so has part: feature:2217227-2217399:-1:exon
so has part: feature:2208107-2208247:-1:exon
so has part: feature:2206803-2206965:-1:exon
so has part: feature:2204297-2204406:-1:exon
so has part: feature:2203125-2203244:-1:exon
so has part: feature:2202883-2203036:-1:exon
so has part: feature:2202718-2202789:-1:exon
so has part: feature:2201993-2202110:-1:exon
so has part: feature:2200366-2200435:-1:exon
so has part: feature:2199736-2199965:-1:exon
so has part: feature:2198490-2198681:-1:exon
so has part: feature:2190823-2192873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2229956-2230308:-1:exon

position:2229956:-1
position: 2229956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2218242-2218267:-1:exon

position:2218242:-1
position: 2218242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2218267:-1
position: 2218267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2217227-2217399:-1:exon

position:2217227:-1
position: 2217227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2217399:-1
position: 2217399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2208107-2208247:-1:exon

position:2208107:-1
position: 2208107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2208247:-1
position: 2208247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2206803-2206965:-1:exon

position:2206803:-1
position: 2206803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2206965:-1
position: 2206965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2204297-2204406:-1:exon

position:2204297:-1
position: 2204297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2204406:-1
position: 2204406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2203125-2203244:-1:exon

position:2203125:-1
position: 2203125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203244:-1
position: 2203244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2202883-2203036:-1:exon

position:2202883:-1
position: 2202883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2203036:-1
position: 2203036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2202718-2202789:-1:exon

position:2202718:-1
position: 2202718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202789:-1
position: 2202789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2201993-2202110:-1:exon

position:2201993:-1
position: 2201993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2202110:-1
position: 2202110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2200366-2200435:-1:exon

position:2200366:-1
position: 2200366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2200435:-1
position: 2200435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2199736-2199965:-1:exon

position:2199736:-1
position: 2199736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2199965:-1
position: 2199965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2198490-2198681:-1:exon

position:2198490:-1
position: 2198490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2198681:-1
position: 2198681
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2190823-2192873:-1:exon

position:2192873:-1
position: 2192873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038586011.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(2190823..2192873,2198604..2198681,2199736..2199965,2200366..2200435,2201993..2202110,2202718..2202789,2202883..2203036,2203125..2203244,2204297..2204406,2206803..2206965,2208107..2208247,2217227..2217399,2218242..2218267,2229956..2230129))
location: region:2190823-2230129:-1
so has part: feature:2229956-2230129:-1:exon
so has part: feature:2218242-2218267:-1:exon
so has part: feature:2217227-2217399:-1:exon
so has part: feature:2208107-2208247:-1:exon
so has part: feature:2206803-2206965:-1:exon
so has part: feature:2204297-2204406:-1:exon
so has part: feature:2203125-2203244:-1:exon
so has part: feature:2202883-2203036:-1:exon
so has part: feature:2202718-2202789:-1:exon
so has part: feature:2201993-2202110:-1:exon
so has part: feature:2200366-2200435:-1:exon
so has part: feature:2199736-2199965:-1:exon
so has part: feature:2198604-2198681:-1:exon
so has part: feature:2190823-2192873:-1:exon

position:2230129:-1
position: 2230129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2229956-2230129:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218242-2218267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2217227-2217399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2208107-2208247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2206803-2206965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2204297-2204406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2203125-2203244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2202883-2203036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2202718-2202789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2201993-2202110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2200366-2200435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2199736-2199965:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198604-2198681:-1:exon

position:2198604:-1
position: 2198604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2190823-2192873:-1:exon

RBBP5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RBBP5
product: RB binding protein 5, histone lysine methyltransferase complex subunit, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038586013.1
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(2190823..2192873,2198490..2198681,2199736..2199965,2200366..2200435,2201993..2202110,2202718..2202789,2202883..2203036,2203125..2203244,2204297..2204406,2206803..2206965,2208107..2208247,2229956..2230096))
location: region:2190823-2230096:-1
so has part: feature:2229956-2230096:-1:exon
so has part: feature:2208107-2208247:-1:exon
so has part: feature:2206803-2206965:-1:exon
so has part: feature:2204297-2204406:-1:exon
so has part: feature:2203125-2203244:-1:exon
so has part: feature:2202883-2203036:-1:exon
so has part: feature:2202718-2202789:-1:exon
so has part: feature:2201993-2202110:-1:exon
so has part: feature:2200366-2200435:-1:exon
so has part: feature:2199736-2199965:-1:exon
so has part: feature:2198490-2198681:-1:exon
so has part: feature:2190823-2192873:-1:exon

position:2230096:-1
position: 2230096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2229956-2230096:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2208107-2208247:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2206803-2206965:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2204297-2204406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2203125-2203244:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2202883-2203036:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2202718-2202789:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2201993-2202110:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2200366-2200435:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2199736-2199965:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2198490-2198681:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2190823-2192873:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X1
translation: MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKAGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(2192845..2192873,2198604..2198681,2199736..2199965,2200366..2200435,2201993..2202110,2202718..2202789,2202883..2203036,2203125..2203244,2204297..2204406,2206803..2206965,2208107..2208247,2217227..2217399,2218242..2218267,2229956..2229974))
location: region:2192845-2229974:-1
so has part: feature:2229956-2229974:-1:exon
so has part: feature:2218242-2218267:-1:exon
so has part: feature:2217227-2217399:-1:exon
so has part: feature:2208107-2208247:-1:exon
so has part: feature:2206803-2206965:-1:exon
so has part: feature:2204297-2204406:-1:exon
so has part: feature:2203125-2203244:-1:exon
so has part: feature:2202883-2203036:-1:exon
so has part: feature:2202718-2202789:-1:exon
so has part: feature:2201993-2202110:-1:exon
so has part: feature:2200366-2200435:-1:exon
so has part: feature:2199736-2199965:-1:exon
so has part: feature:2198604-2198681:-1:exon
so has part: feature:2192845-2192873:-1:exon

XP_038441939.1
type: Protein
SIO_000068: ncbiprotein

position:2192845:-1
position: 2192845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2229974:-1
position: 2229974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2229956-2229974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218242-2218267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2217227-2217399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2208107-2208247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2206803-2206965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2204297-2204406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2203125-2203244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2202883-2203036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2202718-2202789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2201993-2202110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2200366-2200435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2199736-2199965:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198604-2198681:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2192845-2192873:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X2
translation: MNLELLESFGQNYPEEADGTLDCISMALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSASTDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLAAGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(2192845..2192873,2198490..2198681,2199736..2199965,2200366..2200435,2201993..2202110,2202718..2202789,2202883..2203036,2203125..2203244,2204297..2204406,2206803..2206965,2208107..2208247,2217227..2217399,2218242..2218267,2229956..2229974))
location: region:2192845-2229974:-1
so has part: feature:2229956-2229974:-1:exon
so has part: feature:2218242-2218267:-1:exon
so has part: feature:2217227-2217399:-1:exon
so has part: feature:2208107-2208247:-1:exon
so has part: feature:2206803-2206965:-1:exon
so has part: feature:2204297-2204406:-1:exon
so has part: feature:2203125-2203244:-1:exon
so has part: feature:2202883-2203036:-1:exon
so has part: feature:2202718-2202789:-1:exon
so has part: feature:2201993-2202110:-1:exon
so has part: feature:2200366-2200435:-1:exon
so has part: feature:2199736-2199965:-1:exon
so has part: feature:2198490-2198681:-1:exon
so has part: feature:2192845-2192873:-1:exon

XP_038441940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2229956-2229974:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2218242-2218267:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2217227-2217399:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2208107-2208247:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2206803-2206965:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2204297-2204406:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2203125-2203244:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2202883-2203036:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2202718-2202789:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2201993-2202110:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2200366-2200435:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2199736-2199965:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2198490-2198681:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2192845-2192873:-1:exon

RBBP5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RBBP5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: retinoblastoma-binding protein 5 isoform X3
translation: MKSAPVMLTLSDSKHVVLPVDDDSDLNVVASFDRRGEYIYTGNAKGKILVLKTDSQDLVASFRVTTGTSNTTAIKSIEFARKGSCFLINTADRIIRVYDGREILTCGRDGEPEPMQKLQDLVNRTPWKKCCFSGDGEYIVAGSARQHALYIWEKSIGNLVKILHGTRGELLLDVAWHPVRPIIASISSGVVSIWAQNQVENWSAFAPDFKELDENVEYEERESEFDIEDEDKSEPEQTGADAAEDEEVDVTSVDPIAAFCSSDEELEDSKALLYLPIAPEVEDPEENPYGPPPDAVQTSLMDEGASSEKKRQSSADGSQPPKKKPKTTNIELQGVPNDEVHPLLGVKGDGKSKKKQAGRPKGSKGKEKDSPFKPKLYKGDRGLPLEGSAKGKVQAELSQPLAAGGAISELL
SIO_010081: RBBP5
subclass of: SO_0000673
so part of: RBBP5
location: complement(join(2192845..2192873,2198490..2198681,2199736..2199965,2200366..2200435,2201993..2202110,2202718..2202789,2202883..2203036,2203125..2203244,2204297..2204406,2206803..2206943))
location: region:2192845-2206943:-1
so has part: feature:2206803-2206943:-1:exon
so has part: feature:2204297-2204406:-1:exon
so has part: feature:2203125-2203244:-1:exon
so has part: feature:2202883-2203036:-1:exon
so has part: feature:2202718-2202789:-1:exon
so has part: feature:2201993-2202110:-1:exon
so has part: feature:2200366-2200435:-1:exon
so has part: feature:2199736-2199965:-1:exon
so has part: feature:2198490-2198681:-1:exon
so has part: feature:2192845-2192873:-1:exon

XP_038441941.1
type: Protein
SIO_000068: ncbiprotein

position:2206943:-1
position: 2206943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2206803-2206943:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2204297-2204406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2203125-2203244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2202883-2203036:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2202718-2202789:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2201993-2202110:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2200366-2200435:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2199736-2199965:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2198490-2198681:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2192845-2192873:-1:exon

LOC102156359
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102156359
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2230495..2258009
location: region:2230495-2258009:1
so has part: feature:2230495-2258009:1:exon
subclass of: SO_0000011

102156359
type: Gene
SIO_000068: ncbigene

position:2230495:1
position: 2230495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2258009:1
position: 2258009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2230495-2258009:1:exon

LOC102156359
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102156359
product: uncharacterized LOC102156359, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XR_005385584.1
SIO_010081: LOC102156359
subclass of: SO_0000673
so part of: LOC102156359
location: join(2230495..2230753,2246862..2247525,2248617..2248762,2249820..2250007,2257336..2258009)
location: region:2230495-2258009:1
so has part: feature:2230495-2230753:1:exon
so has part: feature:2246862-2247525:1:exon
so has part: feature:2248617-2248762:1:exon
so has part: feature:2249820-2250007:1:exon
so has part: feature:2257336-2258009:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2230495-2230753:1:exon

position:2230753:1
position: 2230753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2246862-2247525:1:exon

position:2246862:1
position: 2246862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2247525:1
position: 2247525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2248617-2248762:1:exon

position:2248617:1
position: 2248617
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248762:1
position: 2248762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2249820-2250007:1:exon

position:2249820:1
position: 2249820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2250007:1
position: 2250007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2257336-2258009:1:exon

position:2257336:1
position: 2257336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102156359
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102156359
product: uncharacterized LOC102156359, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XR_005385583.1
SIO_010081: LOC102156359
subclass of: SO_0000673
so part of: LOC102156359
location: join(2230496..2230753,2246862..2247525,2248617..2248762,2249820..2250007,2255825..2257329)
location: region:2230496-2257329:1
so has part: feature:2230496-2230753:1:exon
so has part: feature:2246862-2247525:1:exon
so has part: feature:2248617-2248762:1:exon
so has part: feature:2249820-2250007:1:exon
so has part: feature:2255825-2257329:1:exon

position:2230496:1
position: 2230496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2257329:1
position: 2257329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2230496-2230753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2246862-2247525:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2248617-2248762:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2249820-2250007:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2255825-2257329:1:exon

position:2255825:1
position: 2255825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102156359
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102156359
product: uncharacterized LOC102156359, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XR_005385582.1
SIO_010081: LOC102156359
subclass of: SO_0000673
so part of: LOC102156359
location: join(2230503..2230753,2246862..2248551)
location: region:2230503-2248551:1
so has part: feature:2230503-2230753:1:exon
so has part: feature:2246862-2248551:1:exon

position:2230503:1
position: 2230503
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2248551:1
position: 2248551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2230503-2230753:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2246862-2248551:1:exon

DSTYK
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
alternative label: RIPK5
gene: DSTYK
gene synonym: RIPK5
note: dual serine/threonine and tyrosine protein kinase; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(2253623..2300336)
location: region:2253623-2300336:-1
so has part: feature:2253623-2300336:-1:exon
subclass of: SO_0000010

478942
type: Gene
SIO_000068: ncbigene

position:2253623:-1
position: 2253623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2300336:-1
position: 2300336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2253623-2300336:-1:exon

DSTYK
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
alternative label: RIPK5
gene: DSTYK
gene synonym: RIPK5
product: dual serine/threonine and tyrosine protein kinase
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001025268.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 74 substitutions, 2 frameshifts, 2 non-frameshifting indels compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001025268.1
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(join(2253623..2254180,2254611..2254745,2256931..2257045,2258398..2258511,2260512..2260644,2261064..2261220,2261942..2262071,2262890..2263066,2263688..2263771,2264174..2264406,2268701..2269370,2281094..2281482,2299887..2300336))
location: region:2253623-2300336:-1
so has part: feature:2299887-2300336:-1:exon
so has part: feature:2281094-2281482:-1:exon
so has part: feature:2268701-2269370:-1:exon
so has part: feature:2264174-2264406:-1:exon
so has part: feature:2263688-2263771:-1:exon
so has part: feature:2262890-2263066:-1:exon
so has part: feature:2261942-2262071:-1:exon
so has part: feature:2261064-2261220:-1:exon
so has part: feature:2260512-2260644:-1:exon
so has part: feature:2258398-2258511:-1:exon
so has part: feature:2256931-2257045:-1:exon
so has part: feature:2254611-2254745:-1:exon
so has part: feature:2253623-2254180:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2299887-2300336:-1:exon

position:2299887:-1
position: 2299887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2281094-2281482:-1:exon

position:2281094:-1
position: 2281094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2281482:-1
position: 2281482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2268701-2269370:-1:exon

position:2268701:-1
position: 2268701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2269370:-1
position: 2269370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2264174-2264406:-1:exon

position:2264174:-1
position: 2264174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2264406:-1
position: 2264406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2263688-2263771:-1:exon

position:2263688:-1
position: 2263688
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2263771:-1
position: 2263771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2262890-2263066:-1:exon

position:2262890:-1
position: 2262890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2263066:-1
position: 2263066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2261942-2262071:-1:exon

position:2261942:-1
position: 2261942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2262071:-1
position: 2262071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2261064-2261220:-1:exon

position:2261064:-1
position: 2261064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261220:-1
position: 2261220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2260512-2260644:-1:exon

position:2260512:-1
position: 2260512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2260644:-1
position: 2260644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2258398-2258511:-1:exon

position:2258398:-1
position: 2258398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2258511:-1
position: 2258511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2256931-2257045:-1:exon

position:2256931:-1
position: 2256931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2257045:-1
position: 2257045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2254611-2254745:-1:exon

position:2254611:-1
position: 2254611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2254745:-1
position: 2254745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2253623-2254180:-1:exon

position:2254180:-1
position: 2254180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DSTYK
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
alternative label: RIPK5
gene: DSTYK
gene synonym: RIPK5
inference: similar to AA sequence (same species):RefSeq:NP_001020439.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 19 substitutions, 2 frameshifts, 1 non-frameshifting indel compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: dual serine/threonine and tyrosine protein kinase
translation: MEGDAPQRVSERVSGPGPGGGGGGMIRELCRGFGRHRRYLGQLRQNLRETQKFFRDIKCSHSHSCPSSPAGGGAAELGPAGDVAEAPLPAGQLSCIAFPPKEEKYLQQIVDCLPCILILGQDCNVKCQLLNLLLGVQVLPTTRLGSEENCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAHQGNWDTIPEEDLEVQEDSEDAAHVLAELEVTMHHALLQDVDIVVAPCQGLRPAVDVLGDLVNDFLPVITYALHKDELSERDEQELQEIRKYFSFPIFFFKVPKLGSEIIASSTRRTENERSPLHHQLMDLGYLSSSHCNCGVPGQDTKAQSMLVEQSEKLRHLSTFSHQVLQTHLVDAAKALNRVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMICETLNTMKGELLDDAANMEFKDVIVPENGEAVGTRELKCCIRQIQELIISRLNQAVANKLISSVDYLRESFVGTLERCLQSLEKSQDVSIHITSNYLKQILNAAYHVEVTFHSGSSVTRMLWEQIKQIIQRITWVNPPTITLEWKRKVAQEAIDSLSASKLAKSICSQFRTRLNSSHEAFAASLRQLEAGHSGRLENTEDLWLKVRKDHAPRLARLSLESRSLQDVLLHRKPKLGQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPSQRPLLGIVQPMLQGIMERLCKSNSERPNTGLDDST
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(join(2253993..2254180,2254611..2254745,2256931..2257045,2258398..2258511,2260512..2260644,2261064..2261220,2261942..2262071,2262890..2263066,2263688..2263771,2264174..2264406,2268701..2269370,2281094..2281482,2299887..2300178))
location: region:2253993-2300178:-1
so has part: feature:2299887-2300178:-1:exon
so has part: feature:2281094-2281482:-1:exon
so has part: feature:2268701-2269370:-1:exon
so has part: feature:2264174-2264406:-1:exon
so has part: feature:2263688-2263771:-1:exon
so has part: feature:2262890-2263066:-1:exon
so has part: feature:2261942-2262071:-1:exon
so has part: feature:2261064-2261220:-1:exon
so has part: feature:2260512-2260644:-1:exon
so has part: feature:2258398-2258511:-1:exon
so has part: feature:2256931-2257045:-1:exon
so has part: feature:2254611-2254745:-1:exon
so has part: feature:2253993-2254180:-1:exon

NP_001020439.1
type: Protein
SIO_000068: ncbiprotein

position:2253993:-1
position: 2253993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2300178:-1
position: 2300178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2299887-2300178:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2281094-2281482:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2268701-2269370:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2264174-2264406:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2263688-2263771:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2262890-2263066:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2261942-2262071:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2261064-2261220:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2260512-2260644:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2258398-2258511:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2256931-2257045:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2254611-2254745:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2253993-2254180:-1:exon

DSTYK
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
alternative label: RIPK5
gene: DSTYK
gene synonym: RIPK5
note: propagated from UniProtKB/Swiss-Prot (Q4VSN4.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(2300107..2300178)
location: region:2300107-2300178:-1
so has part: feature:2300107-2300178:-1:exon

position:2300107:-1
position: 2300107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2300107-2300178:-1:exon

DSTYK
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9615
alternative label: RIPK5
gene: DSTYK
gene synonym: RIPK5
note: Region: catalytic domain
SIO_010081: DSTYK
subclass of: SO_0000673
so part of: DSTYK
location: complement(join(2254077..2254180,2254611..2254745,2256931..2257045,2258398..2258511,2260512..2260644,2261064..2261220,2261942..2261960))
location: region:2254077-2261960:-1
so has part: feature:2261942-2261960:-1:exon
so has part: feature:2261064-2261220:-1:exon
so has part: feature:2260512-2260644:-1:exon
so has part: feature:2258398-2258511:-1:exon
so has part: feature:2256931-2257045:-1:exon
so has part: feature:2254611-2254745:-1:exon
so has part: feature:2254077-2254180:-1:exon

position:2254077:-1
position: 2254077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2261960:-1
position: 2261960
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2261942-2261960:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2261064-2261220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2260512-2260644:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2258398-2258511:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2256931-2257045:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2254611-2254745:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2254077-2254180:-1:exon

LOC119868100
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119868100
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2310535..2310637
location: region:2310535-2310637:1
so has part: feature:2310535-2310637:1:exon
subclass of: SO_0000623

119868100
type: Gene
SIO_000068: ncbigene

position:2310535:1
position: 2310535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2310637:1
position: 2310637
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2310535-2310637:1:exon

LOC119868100
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: snRNA
gene: LOC119868100
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005385870.1
SIO_010081: LOC119868100
subclass of: SO_0000673
so part of: LOC119868100
location: 2310535..2310637
location: region:2310535-2310637:1
so has part: feature:2310535-2310637:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2310535-2310637:1:exon

TMCC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2317558..2358709
location: region:2317558-2358709:1
so has part: feature:2317558-2358709:1:exon
subclass of: SO_0000010

488569
type: Gene
SIO_000068: ncbigene

position:2317558:1
position: 2317558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2358709:1
position: 2358709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2317558-2358709:1:exon

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 16 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_038586015.1
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2317558..2318115,2331418..2331957,2354157..2355097,2356494..2356629,2357143..2358709)
location: region:2317558-2358709:1
so has part: feature:2317558-2318115:1:exon
so has part: feature:2331418-2331957:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2358709:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2317558-2318115:1:exon

position:2318115:1
position: 2318115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2331418-2331957:1:exon

position:2331418:1
position: 2331418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2331957:1
position: 2331957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2354157-2355097:1:exon

position:2354157:1
position: 2354157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2355097:1
position: 2355097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2356494-2356629:1:exon

position:2356494:1
position: 2356494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2356629:1
position: 2356629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2357143-2358709:1:exon

position:2357143:1
position: 2357143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X4
translation: MKRCKSDELQQQQQQQQQQQQQQGEEDAAGLEDAAGHLPGADLRPGEAAGANSAGGPTSDMGAAAAPNPGPRSKPPDLKKIQQLSEGSMFGHGLKHLFHSRRRSREREHQTSQDSQQQQQQQQQQGMSDHDSPDEKERSPEMHRVSYAVSLHDLPARPTAFNRVLQQIRSRPSIKRGASLHSGGGGGGGSRRSKSSSLEPQRGSPHLLRKAPQDSSLAAILHQHQCRPRSSSTTDTALLLADGGNVYLLAEEAEGSGDKVDKGDLGALSLPGGPSHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPAGALGSPKSSALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTALLVLVLFLLWKHWDSLTYLLEHVLLPS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2317879..2318115,2331418..2331957,2354157..2355097,2356494..2356629,2357143..2357454)
location: region:2317879-2357454:1
so has part: feature:2317879-2318115:1:exon
so has part: feature:2331418-2331957:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2357454:1:exon

XP_038441943.1
type: Protein
SIO_000068: ncbiprotein

position:2317879:1
position: 2317879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2357454:1
position: 2357454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2317879-2318115:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2331418-2331957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2357143-2357454:1:exon

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038586017.1
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2318177..2319164,2331418..2331957,2354157..2355097,2356494..2356629,2357143..2358709)
location: region:2318177-2358709:1
so has part: feature:2318177-2319164:1:exon
so has part: feature:2331418-2331957:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2358709:1:exon

position:2318177:1
position: 2318177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2318177-2319164:1:exon

position:2319164:1
position: 2319164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2331418-2331957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2357143-2358709:1:exon

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038586018.1
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2319226..2319712,2331418..2331957,2354157..2355097,2356494..2356629,2357143..2358709)
location: region:2319226-2358709:1
so has part: feature:2319226-2319712:1:exon
so has part: feature:2331418-2331957:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2358709:1:exon

position:2319226:1
position: 2319226
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2319226-2319712:1:exon

position:2319712:1
position: 2319712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2331418-2331957:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2357143-2358709:1:exon

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X1
translation: MFGHGLKHLFHSRRRSREREHQTSQDSQQQQQQQQQQGMSDHDSPDEKERSPEMHRVSYAVSLHDLPARPTAFNRVLQQIRSRPSIKRGASLHSGGGGGGGSRRSKSSSLEPQRGSPHLLRKAPQDSSLAAILHQHQCRPRSSSTTDTALLLADGGNVYLLAEEAEGSGDKVDKGDLGALSLPGGPSHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPAGALGSPKSSALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTALLVLVLFLLWKHWDSLTYLLEHVLLPS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2331445..2331957,2354157..2355097,2356494..2356629,2357143..2357454)
location: region:2331445-2357454:1
so has part: feature:2331445-2331957:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2357454:1:exon

XP_038441945.1
type: Protein
SIO_000068: ncbiprotein

position:2331445:1
position: 2331445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2331445-2331957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2357143-2357454:1:exon

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X1
translation: MFGHGLKHLFHSRRRSREREHQTSQDSQQQQQQQQQQGMSDHDSPDEKERSPEMHRVSYAVSLHDLPARPTAFNRVLQQIRSRPSIKRGASLHSGGGGGGGSRRSKSSSLEPQRGSPHLLRKAPQDSSLAAILHQHQCRPRSSSTTDTALLLADGGNVYLLAEEAEGSGDKVDKGDLGALSLPGGPSHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPAGALGSPKSSALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTALLVLVLFLLWKHWDSLTYLLEHVLLPS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2331445..2331957,2354157..2355097,2356494..2356629,2357143..2357454)
location: region:2331445-2357454:1
so has part: feature:2331445-2331957:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2357454:1:exon

XP_038441946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2331445-2331957:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2357143-2357454:1:exon

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_038586020.1
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2344213..2344409,2354157..2355097,2356494..2356629,2357143..2358709)
location: region:2344213-2358709:1
so has part: feature:2344213-2344409:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2358709:1:exon

position:2344213:1
position: 2344213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2344213-2344409:1:exon

position:2344409:1
position: 2344409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2357143-2358709:1:exon

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X3
translation: MKSKEERTAVDKGDLGALSLPGGPSHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPAGALGSPKSSALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTALLVLVLFLLWKHWDSLTYLLEHVLLPS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2344383..2344409,2354157..2355097,2356494..2356629,2357143..2357454)
location: region:2344383-2357454:1
so has part: feature:2344383-2344409:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2357454:1:exon

XP_038441948.1
type: Protein
SIO_000068: ncbiprotein

position:2344383:1
position: 2344383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2344383-2344409:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2357143-2357454:1:exon

TMCC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMCC2
product: transmembrane and coiled-coil domain family 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038586019.1
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2352965..2353420,2354157..2355097,2356494..2356629,2357143..2358709)
location: region:2352965-2358709:1
so has part: feature:2352965-2353420:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2358709:1:exon

position:2352965:1
position: 2352965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2352965-2353420:1:exon

position:2353420:1
position: 2353420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2357143-2358709:1:exon

TMCC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMCC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane and coiled-coil domains protein 2 isoform X2
translation: MKRKRLPTTGDSWKVDKGDLGALSLPGGPSHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPAGALGSPKSSALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKAQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTALLVLVLFLLWKHWDSLTYLLEHVLLPS
SIO_010081: TMCC2
subclass of: SO_0000673
so part of: TMCC2
location: join(2353379..2353420,2354157..2355097,2356494..2356629,2357143..2357454)
location: region:2353379-2357454:1
so has part: feature:2353379-2353420:1:exon
so has part: feature:2354157-2355097:1:exon
so has part: feature:2356494-2356629:1:exon
so has part: feature:2357143-2357454:1:exon

XP_038441947.1
type: Protein
SIO_000068: ncbiprotein

position:2353379:1
position: 2353379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2353379-2353420:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2354157-2355097:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2356494-2356629:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2357143-2357454:1:exon

NUAK2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2381515..2399704)
location: region:2381515-2399704:-1
so has part: feature:2381515-2399704:-1:exon
subclass of: SO_0000010

488570
type: Gene
SIO_000068: ncbigene

position:2381515:-1
position: 2381515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2399704:-1
position: 2399704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2381515-2399704:-1:exon

NUAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: NUAK2
product: NUAK family kinase 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038586023.1
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2381515..2382063,2382991..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390220,2399459..2399704))
location: region:2381515-2399704:-1
so has part: feature:2399459-2399704:-1:exon
so has part: feature:2390100-2390220:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2382991-2383674:-1:exon
so has part: feature:2381515-2382063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2399459-2399704:-1:exon

position:2399459:-1
position: 2399459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2390100-2390220:-1:exon

position:2390100:-1
position: 2390100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2390220:-1
position: 2390220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2387347-2387498:-1:exon

position:2387347:-1
position: 2387347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2387498:-1
position: 2387498
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2386926-2386991:-1:exon

position:2386926:-1
position: 2386926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2386991:-1
position: 2386991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2384920-2385039:-1:exon

position:2384920:-1
position: 2384920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2385039:-1
position: 2385039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2384339-2384471:-1:exon

position:2384339:-1
position: 2384339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2384471:-1
position: 2384471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2382991-2383674:-1:exon

position:2382991:-1
position: 2382991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2383674:-1
position: 2383674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2381515-2382063:-1:exon

position:2382063:-1
position: 2382063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NUAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: NUAK2
product: NUAK family kinase 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_038586021.1
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2381515..2382063,2382668..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390220,2399459..2399704))
location: region:2381515-2399704:-1
so has part: feature:2399459-2399704:-1:exon
so has part: feature:2390100-2390220:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2382668-2383674:-1:exon
so has part: feature:2381515-2382063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2399459-2399704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390100-2390220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2387347-2387498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386926-2386991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384920-2385039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384339-2384471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2382668-2383674:-1:exon

position:2382668:-1
position: 2382668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2381515-2382063:-1:exon

NUAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: NUAK2
product: NUAK family kinase 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038586024.1
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2381515..2382063,2382668..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390220,2391806..2392187))
location: region:2381515-2392187:-1
so has part: feature:2391806-2392187:-1:exon
so has part: feature:2390100-2390220:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2382668-2383674:-1:exon
so has part: feature:2381515-2382063:-1:exon

position:2392187:-1
position: 2392187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2391806-2392187:-1:exon

position:2391806:-1
position: 2391806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2390100-2390220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2387347-2387498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386926-2386991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384920-2385039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384339-2384471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2382668-2383674:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2381515-2382063:-1:exon

NUAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 2 isoform X3
translation: MEPLAFPRRPGPAPAAASALAAELARPRADGLIKSPKPQMKKQAVKRHHHKHNLRHRYEFLETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLMHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYISERQRLSEQDARHFFRQIVSAVRYCHQNGIVHRDLKLENILLDANGNIKIADFGLSNLYHQGKFLQTFCGSPLYASPEIVNGKPYTGPEVDSWSLGVLLYILVHGTMPFDGQDHKTLVRQISNGSYREPPKPSDACGLIRWLLMVNPTRRATLEDVASHWWVNWGYATRVGEHEAPLEGGPPGSDSGRASVADWLRRSSRPLLENGAKVCSFFKQHTPGASIGPGLERQHSLKKSRKENDMAQSLQGDPADDPSVRPGRGNLKLPKSILKKKAPTVEGARGDPEPGPGPMDPGQAAPLLPKKGILKKPRQRESGYYSSPEPSESGELLDAGDVFMSADSEEQKPPQVPGLPLHRKGILKHNGSLPFPILQTWPKPPGLAARNLKDLKRLRLLLMDFISPGPDSPGAHLGPRRC
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2381906..2382063,2382991..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390220,2399459..2399704))
location: region:2381906-2399704:-1
so has part: feature:2399459-2399704:-1:exon
so has part: feature:2390100-2390220:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2382991-2383674:-1:exon
so has part: feature:2381906-2382063:-1:exon

XP_038441951.1
type: Protein
SIO_000068: ncbiprotein

position:2381906:-1
position: 2381906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399459-2399704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390100-2390220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2387347-2387498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386926-2386991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384920-2385039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384339-2384471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2382991-2383674:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2381906-2382063:-1:exon

NUAK2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: NUAK2
product: NUAK family kinase 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_038586022.1
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2381920..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390220,2399459..2399704))
location: region:2381920-2399704:-1
so has part: feature:2399459-2399704:-1:exon
so has part: feature:2390100-2390220:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2381920-2383674:-1:exon

position:2381920:-1
position: 2381920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399459-2399704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390100-2390220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2387347-2387498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386926-2386991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384920-2385039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384339-2384471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2381920-2383674:-1:exon

NUAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 2 isoform X1
translation: MEPLAFPRRPGPAPAAASALAAELARPRADGLIKSPKPQMKKQAVKRHHHKHNLRHRYEFLETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLMHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYISERQRLSEQDARHFFRQIVSAVRYCHQNGIVHRDLKLENILLDANGNIKIADFGLSNLYHQGKFLQTFCGSPLYASPEIVNGKPYTGPEVDSWSLGVLLYILVHGTMPFDGQDHKTLVRQISNGSYREPPKPSDACGLIRWLLMVNPTRRATLEDVASHWWVNWGYATRVGEHEAPLEGGPPGSDSGRASVADWLRRSSRPLLENGAKVCSFFKQHTPGASIGPGLERQHSLKKSRKENDMAQSLQGDPADDPSVRPGRGNLKLPKSILKKKAPTVEGARGDPEPGPGPMDPGQAAPLLPKKGILKKPRQRESGYYSSPEPSESGELLDAGDVFMSADSEEQKPPQVPGLPLHRKGILKHNGKFSCTALELPTPSTFGSLDELASPHPLARASHPSGAMSEDSILSSESFDQLDLPQRLPEPVLRGCVSVDNLMGLEEPPAEGPGSRGLRRWWRESLGDSCFSLTDCQEVLSPFPSFKPGPSLLDSLLGI
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2381998..2382063,2382668..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390220,2399459..2399704))
location: region:2381998-2399704:-1
so has part: feature:2399459-2399704:-1:exon
so has part: feature:2390100-2390220:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2382668-2383674:-1:exon
so has part: feature:2381998-2382063:-1:exon

XP_038441949.1
type: Protein
SIO_000068: ncbiprotein

position:2381998:-1
position: 2381998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399459-2399704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390100-2390220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2387347-2387498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386926-2386991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384920-2385039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384339-2384471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2382668-2383674:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2381998-2382063:-1:exon

NUAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 2 isoform X4
translation: MHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYISERQRLSEQDARHFFRQIVSAVRYCHQNGIVHRDLKLENILLDANGNIKIADFGLSNLYHQGKFLQTFCGSPLYASPEIVNGKPYTGPEVDSWSLGVLLYILVHGTMPFDGQDHKTLVRQISNGSYREPPKPSDACGLIRWLLMVNPTRRATLEDVASHWWVNWGYATRVGEHEAPLEGGPPGSDSGRASVADWLRRSSRPLLENGAKVCSFFKQHTPGASIGPGLERQHSLKKSRKENDMAQSLQGDPADDPSVRPGRGNLKLPKSILKKKAPTVEGARGDPEPGPGPMDPGQAAPLLPKKGILKKPRQRESGYYSSPEPSESGELLDAGDVFMSADSEEQKPPQVPGLPLHRKGILKHNGKFSCTALELPTPSTFGSLDELASPHPLARASHPSGAMSEDSILSSESFDQLDLPQRLPEPVLRGCVSVDNLMGLEEPPAEGPGSRGLRRWWRESLGDSCFSLTDCQEVLSPFPSFKPGPSLLDSLLGI
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2381998..2382063,2382668..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390169))
location: region:2381998-2390169:-1
so has part: feature:2390100-2390169:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2382668-2383674:-1:exon
so has part: feature:2381998-2382063:-1:exon

XP_038441952.1
type: Protein
SIO_000068: ncbiprotein

position:2390169:-1
position: 2390169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2390100-2390169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2387347-2387498:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2386926-2386991:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2384920-2385039:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384339-2384471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2382668-2383674:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2381998-2382063:-1:exon

NUAK2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: NUAK2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NUAK family SNF1-like kinase 2 isoform X2
translation: MEPLAFPRRPGPAPAAASALAAELARPRADGLIKSPKPQMKKQAVKRHHHKHNLRHRYEFLETLGKGTYGKVKKARESSGRLVAIKSIRKDKIKDEQDLMHIRREIEIMSSLNHPHIIAIHEVFENSSKIVIVMEYASRGDLYDYISERQRLSEQDARHFFRQIVSAVRYCHQNGIVHRDLKLENILLDANGNIKIADFGLSNLYHQGKFLQTFCGSPLYASPEIVNGKPYTGPEVDSWSLGVLLYILVHGTMPFDGQDHKTLVRQISNGSYREPPKPSDACGLIRWLLMVNPTRRATLEDVASHWWVNWGYATRVGEHEAPLEGGPPGSDSGRASVADWLRRSSRPLLENGAKVCSFFKQHTPGASIGPGLERQHSLKKSRKENDMAQSLQGDPADDPSVRPGRGNLKLPKSILKKKAPTVEGARGDPEPGPGPMDPGQAAPLLPKKGILKKPRQRESGYYSSPEPSESGELLDAGDVFMSADSEEQKPPQVPGLPLHRKGILKHNGKFSCTALELPTPSTFGSLDELASPHPLARASHPSGAMSEDSILSSESFDQLDLPQRLPEPVLRGCVSVDNLMGLEEPPAEGPGSRGLRRWWRESLGDSCFSLTDCQEVTEAYRQALGVSSKLS
SIO_010081: NUAK2
subclass of: SO_0000673
so part of: NUAK2
location: complement(join(2382617..2383674,2384339..2384471,2384920..2385039,2386926..2386991,2387347..2387498,2390100..2390220,2399459..2399704))
location: region:2382617-2399704:-1
so has part: feature:2399459-2399704:-1:exon
so has part: feature:2390100-2390220:-1:exon
so has part: feature:2387347-2387498:-1:exon
so has part: feature:2386926-2386991:-1:exon
so has part: feature:2384920-2385039:-1:exon
so has part: feature:2384339-2384471:-1:exon
so has part: feature:2382617-2383674:-1:exon

XP_038441950.1
type: Protein
SIO_000068: ncbiprotein

position:2382617:-1
position: 2382617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2399459-2399704:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2390100-2390220:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2387347-2387498:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2386926-2386991:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2384920-2385039:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2384339-2384471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2382617-2383674:-1:exon

KLHDC8A
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: KLHDC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2416458..2422770)
location: region:2416458-2422770:-1
so has part: feature:2416458-2422770:-1:exon
subclass of: SO_0000010

488571
type: Gene
SIO_000068: ncbigene

position:2416458:-1
position: 2416458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2422770:-1
position: 2422770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2416458-2422770:-1:exon

KLHDC8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: KLHDC8A
product: kelch domain containing 8A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_038586025.1
SIO_010081: KLHDC8A
subclass of: SO_0000673
so part of: KLHDC8A
location: complement(join(2416458..2417435,2418361..2418462,2419065..2419280,2419484..2419648,2422395..2422770))
location: region:2416458-2422770:-1
so has part: feature:2422395-2422770:-1:exon
so has part: feature:2419484-2419648:-1:exon
so has part: feature:2419065-2419280:-1:exon
so has part: feature:2418361-2418462:-1:exon
so has part: feature:2416458-2417435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2422395-2422770:-1:exon

position:2422395:-1
position: 2422395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2419484-2419648:-1:exon

position:2419484:-1
position: 2419484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2419648:-1
position: 2419648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2419065-2419280:-1:exon

position:2419065:-1
position: 2419065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2419280:-1
position: 2419280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2418361-2418462:-1:exon

position:2418361:-1
position: 2418361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2418462:-1
position: 2418462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2416458-2417435:-1:exon

position:2417435:-1
position: 2417435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KLHDC8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: KLHDC8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: kelch domain-containing protein 8A
translation: MELPSVKDFQWKRLAPLPSRRVYCSLLESGGQVYAIGGCDDSGVPVDCFEVYSPEADRWTALPRLPTARAGVAATALGKRIMVIGGVGTSQLPLKVVEMYNIDEGKWKRRSVLREAAMGISVTAKDYRVYAAGGMGLDLRPHNHLQHYDMLKDMWVSLAPMPTPRYAATSFLRGSKIYVLGGRQSKYAVNAFEVFDIETRSWTKFPNIPCKRAFSSFVTLDDRLYSLGGLRQARLYRQPKFLRTMDVFDMEQGGWLKMERSFFLKKRRADFVAGSLSGRVIVAGGLGNQPTVLETAEAFHPGKNKWEVLPPMPTPRCACSSIVIKNCLLAVGGVNQGLSDTVEALCVSDS
SIO_010081: KLHDC8A
subclass of: SO_0000673
so part of: KLHDC8A
location: complement(join(2417242..2417435,2418361..2418462,2419065..2419280,2419484..2419648,2422395..2422770))
location: region:2417242-2422770:-1
so has part: feature:2422395-2422770:-1:exon
so has part: feature:2419484-2419648:-1:exon
so has part: feature:2419065-2419280:-1:exon
so has part: feature:2418361-2418462:-1:exon
so has part: feature:2417242-2417435:-1:exon

XP_038441953.1
type: Protein
SIO_000068: ncbiprotein

position:2417242:-1
position: 2417242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2422395-2422770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2419484-2419648:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2419065-2419280:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2418361-2418462:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2417242-2417435:-1:exon

LEMD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LEMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2455922..2482323)
location: region:2455922-2482323:-1
so has part: feature:2455922-2482323:-1:exon
subclass of: SO_0000010

100685521
type: Gene
SIO_000068: ncbigene

position:2455922:-1
position: 2455922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2482323:-1
position: 2482323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2455922-2482323:-1:exon

LEMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LEMD1
product: LEM domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038586028.1
SIO_010081: LEMD1
subclass of: SO_0000673
so part of: LEMD1
location: complement(join(2455922..2456533,2457490..2457566,2469807..2469887,2477281..2477351,2479951..2480073,2480690..2480809,2482184..2482323))
location: region:2455922-2482323:-1
so has part: feature:2482184-2482323:-1:exon
so has part: feature:2480690-2480809:-1:exon
so has part: feature:2479951-2480073:-1:exon
so has part: feature:2477281-2477351:-1:exon
so has part: feature:2469807-2469887:-1:exon
so has part: feature:2457490-2457566:-1:exon
so has part: feature:2455922-2456533:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2482184-2482323:-1:exon

position:2482184:-1
position: 2482184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2480690-2480809:-1:exon

position:2480690:-1
position: 2480690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480809:-1
position: 2480809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2479951-2480073:-1:exon

position:2479951:-1
position: 2479951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480073:-1
position: 2480073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2477281-2477351:-1:exon

position:2477281:-1
position: 2477281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2477351:-1
position: 2477351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2469807-2469887:-1:exon

position:2469807:-1
position: 2469807
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2469887:-1
position: 2469887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2457490-2457566:-1:exon

position:2457490:-1
position: 2457490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2457566:-1
position: 2457566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2455922-2456533:-1:exon

position:2456533:-1
position: 2456533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LEMD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LEMD1
product: LEM domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038586029.1
SIO_010081: LEMD1
subclass of: SO_0000673
so part of: LEMD1
location: complement(join(2455922..2456533,2457490..2457566,2477281..2477351,2479951..2480073,2480690..2480809,2482184..2482322))
location: region:2455922-2482322:-1
so has part: feature:2482184-2482322:-1:exon
so has part: feature:2480690-2480809:-1:exon
so has part: feature:2479951-2480073:-1:exon
so has part: feature:2477281-2477351:-1:exon
so has part: feature:2457490-2457566:-1:exon
so has part: feature:2455922-2456533:-1:exon

position:2482322:-1
position: 2482322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2482184-2482322:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2480690-2480809:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2479951-2480073:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2477281-2477351:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2457490-2457566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2455922-2456533:-1:exon

LEMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LEMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LEM domain-containing protein 1 isoform X2
translation: MVDVKSLSDYELQNELNKLGFSPGPILPSTRKVYEKKLVQLLVSPPCASTVMNGPCELDRAQDDDDSEELNVTIILKGNIILSSEKNKALKKRLEASNTNPEALDIYYLAYKHPEGIRFPNRASNTRFEGWSCIRETDYCPVNRSVEFGNLEILPVGLKLAVFGIFIIVIFVYITVEKEPFFG
SIO_010081: LEMD1
subclass of: SO_0000673
so part of: LEMD1
location: complement(join(2456335..2456533,2457490..2457566,2477281..2477351,2479951..2480073,2480690..2480771))
location: region:2456335-2480771:-1
so has part: feature:2480690-2480771:-1:exon
so has part: feature:2479951-2480073:-1:exon
so has part: feature:2477281-2477351:-1:exon
so has part: feature:2457490-2457566:-1:exon
so has part: feature:2456335-2456533:-1:exon

XP_038441957.1
type: Protein
SIO_000068: ncbiprotein

position:2456335:-1
position: 2456335
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2480771:-1
position: 2480771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2480690-2480771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479951-2480073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2477281-2477351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2457490-2457566:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2456335-2456533:-1:exon

LEMD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LEMD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LEM domain-containing protein 1 isoform X1
translation: MVDVKSLSDYELQNELNKLGFSPGPILPSTRKVYEKKLVQLLVSPPCASTVMNGPCELDRAQDDDDSEELNVTIILKGNIILSSEKNKALKKNPVFEIQEQQEEIMKSNSDYSDNMIIKRLEASNTNPEALDIYYLAYKHPEGIRFPNRASNTRFEGWSCIRETDYCPVNRSVEFGNLEILPVGLKLAVFGIFIIVIFVYITVEKEPFFG
SIO_010081: LEMD1
subclass of: SO_0000673
so part of: LEMD1
location: complement(join(2456335..2456533,2457490..2457566,2469807..2469887,2477281..2477351,2479951..2480073,2480690..2480771))
location: region:2456335-2480771:-1
so has part: feature:2480690-2480771:-1:exon
so has part: feature:2479951-2480073:-1:exon
so has part: feature:2477281-2477351:-1:exon
so has part: feature:2469807-2469887:-1:exon
so has part: feature:2457490-2457566:-1:exon
so has part: feature:2456335-2456533:-1:exon

XP_038441956.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2480690-2480771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2479951-2480073:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2477281-2477351:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2469807-2469887:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2457490-2457566:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2456335-2456533:-1:exon

LOC111094509
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094509
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2482362..2507229
location: region:2482362-2507229:1
so has part: feature:2482362-2507229:1:exon
subclass of: SO_0000011

111094509
type: Gene
SIO_000068: ncbigene

position:2482362:1
position: 2482362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2507229:1
position: 2507229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2482362-2507229:1:exon

LOC111094509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094509
product: uncharacterized LOC111094509, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385586.1
SIO_010081: LOC111094509
subclass of: SO_0000673
so part of: LOC111094509
location: join(2482362..2482877,2487049..2487193,2488044..2488219,2490075..2490191,2498269..2500861,2500963..2501085,2501830..2501983,2503368..2503519,2505001..2505103,2505774..2507229)
location: region:2482362-2507229:1
so has part: feature:2482362-2482877:1:exon
so has part: feature:2487049-2487193:1:exon
so has part: feature:2488044-2488219:1:exon
so has part: feature:2490075-2490191:1:exon
so has part: feature:2498269-2500861:1:exon
so has part: feature:2500963-2501085:1:exon
so has part: feature:2501830-2501983:1:exon
so has part: feature:2503368-2503519:1:exon
so has part: feature:2505001-2505103:1:exon
so has part: feature:2505774-2507229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2482362-2482877:1:exon

position:2482877:1
position: 2482877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2487049-2487193:1:exon

position:2487049:1
position: 2487049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2487193:1
position: 2487193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2488044-2488219:1:exon

position:2488044:1
position: 2488044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2488219:1
position: 2488219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2490075-2490191:1:exon

position:2490075:1
position: 2490075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2490191:1
position: 2490191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2498269-2500861:1:exon

position:2498269:1
position: 2498269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2500861:1
position: 2500861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2500963-2501085:1:exon

position:2500963:1
position: 2500963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2501085:1
position: 2501085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2501830-2501983:1:exon

position:2501830:1
position: 2501830
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2501983:1
position: 2501983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2503368-2503519:1:exon

position:2503368:1
position: 2503368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2503519:1
position: 2503519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2505001-2505103:1:exon

position:2505001:1
position: 2505001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2505103:1
position: 2505103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2505774-2507229:1:exon

position:2505774:1
position: 2505774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111094509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094509
product: uncharacterized LOC111094509, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385585.1
SIO_010081: LOC111094509
subclass of: SO_0000673
so part of: LOC111094509
location: join(2482362..2482584,2487049..2487193,2488044..2488219,2490075..2490191,2498269..2500861,2500963..2501085,2501830..2501983,2503368..2503519,2505001..2505103,2505774..2507229)
location: region:2482362-2507229:1
so has part: feature:2482362-2482584:1:exon
so has part: feature:2487049-2487193:1:exon
so has part: feature:2488044-2488219:1:exon
so has part: feature:2490075-2490191:1:exon
so has part: feature:2498269-2500861:1:exon
so has part: feature:2500963-2501085:1:exon
so has part: feature:2501830-2501983:1:exon
so has part: feature:2503368-2503519:1:exon
so has part: feature:2505001-2505103:1:exon
so has part: feature:2505774-2507229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2482362-2482584:1:exon

position:2482584:1
position: 2482584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2487049-2487193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488044-2488219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2490075-2490191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2498269-2500861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2500963-2501085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501830-2501983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2503368-2503519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505001-2505103:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2505774-2507229:1:exon

LOC111094509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094509
product: uncharacterized LOC111094509, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385587.1
SIO_010081: LOC111094509
subclass of: SO_0000673
so part of: LOC111094509
location: join(2482362..2482584,2487049..2487193,2488044..2488219,2490075..2490191,2498269..2500861,2500963..2501085,2501830..2501983,2503368..2503519,2505001..2505103,2505774..2505844,2506023..2507229)
location: region:2482362-2507229:1
so has part: feature:2482362-2482584:1:exon
so has part: feature:2487049-2487193:1:exon
so has part: feature:2488044-2488219:1:exon
so has part: feature:2490075-2490191:1:exon
so has part: feature:2498269-2500861:1:exon
so has part: feature:2500963-2501085:1:exon
so has part: feature:2501830-2501983:1:exon
so has part: feature:2503368-2503519:1:exon
so has part: feature:2505001-2505103:1:exon
so has part: feature:2505774-2505844:1:exon
so has part: feature:2506023-2507229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2482362-2482584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2487049-2487193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488044-2488219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2490075-2490191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2498269-2500861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2500963-2501085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501830-2501983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2503368-2503519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505001-2505103:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2505774-2505844:1:exon

position:2505844:1
position: 2505844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2506023-2507229:1:exon

position:2506023:1
position: 2506023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111094509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094509
product: uncharacterized LOC111094509, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385588.1
SIO_010081: LOC111094509
subclass of: SO_0000673
so part of: LOC111094509
location: join(2482362..2482584,2487049..2487193,2488044..2488219,2490075..2490191,2498269..2500861,2500963..2501085,2501830..2501983,2503368..2503519,2505001..2505103,2506023..2507229)
location: region:2482362-2507229:1
so has part: feature:2482362-2482584:1:exon
so has part: feature:2487049-2487193:1:exon
so has part: feature:2488044-2488219:1:exon
so has part: feature:2490075-2490191:1:exon
so has part: feature:2498269-2500861:1:exon
so has part: feature:2500963-2501085:1:exon
so has part: feature:2501830-2501983:1:exon
so has part: feature:2503368-2503519:1:exon
so has part: feature:2505001-2505103:1:exon
so has part: feature:2506023-2507229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2482362-2482584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2487049-2487193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488044-2488219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2490075-2490191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2498269-2500861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2500963-2501085:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2501830-2501983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2503368-2503519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505001-2505103:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2506023-2507229:1:exon

LOC111094509
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094509
product: uncharacterized LOC111094509, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005385589.1
SIO_010081: LOC111094509
subclass of: SO_0000673
so part of: LOC111094509
location: join(2482362..2482584,2487049..2487193,2488044..2488219,2490075..2490191,2498269..2500861,2500966..2501085,2501830..2501983,2503368..2503519,2505001..2505103,2505774..2507229)
location: region:2482362-2507229:1
so has part: feature:2482362-2482584:1:exon
so has part: feature:2487049-2487193:1:exon
so has part: feature:2488044-2488219:1:exon
so has part: feature:2490075-2490191:1:exon
so has part: feature:2498269-2500861:1:exon
so has part: feature:2500966-2501085:1:exon
so has part: feature:2501830-2501983:1:exon
so has part: feature:2503368-2503519:1:exon
so has part: feature:2505001-2505103:1:exon
so has part: feature:2505774-2507229:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2482362-2482584:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2487049-2487193:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2488044-2488219:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2490075-2490191:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2498269-2500861:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2500966-2501085:1:exon

position:2500966:1
position: 2500966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2501830-2501983:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2503368-2503519:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2505001-2505103:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2505774-2507229:1:exon

LOC102156938
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102156938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2494806..2496470
location: region:2494806-2496470:1
so has part: feature:2494806-2496470:1:exon
subclass of: SO_0000010

102156938
type: Gene
SIO_000068: ncbigene

position:2494806:1
position: 2494806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2496470:1
position: 2496470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2494806-2496470:1:exon

LOC102156938
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC102156938
product: adenylate kinase 2, mitochondrial-like, transcript variant X4
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038586027.1
SIO_010081: LOC102156938
subclass of: SO_0000673
so part of: LOC102156938
location: 2494806..2496470
location: region:2494806-2496470:1
so has part: feature:2494806-2496470:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2494806-2496470:1:exon

LOC102156938
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC102156938
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: adenylate kinase 2, mitochondrial-like
translation: MAPNVPAAEPAPESPKGIRAVLLGPPGAGKGTQAPKLAENFCVCHLATGDMLRAMVASGSELGKKLKATMDAGKLVSDEMVVELIEKNLETPQCKNGFLLDGFPRTVRQAEMLDDLMEKRKEKLDSVIEFSIPDSLLIQRITGRLIHPLSGRSYHEEFNPPKEPMKDDITGEPLVRRSDDNEKALKIRLEAYHTQTTPLVDYYRKRGIHSVIDATQTPDVVFASILAAFSKATS
SIO_010081: LOC102156938
subclass of: SO_0000673
so part of: LOC102156938
location: 2494873..2495578
location: region:2494873-2495578:1
so has part: feature:2494873-2495578:1:exon

XP_038441955.1
type: Protein
SIO_000068: ncbiprotein

position:2494873:1
position: 2494873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2495578:1
position: 2495578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2494873-2495578:1:exon

LOC111094510
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111094510
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2496539..2512045)
location: region:2496539-2512045:-1
so has part: feature:2496539-2512045:-1:exon
subclass of: SO_0000011

111094510
type: Gene
SIO_000068: ncbigene

position:2496539:-1
position: 2496539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2512045:-1
position: 2512045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2496539-2512045:-1:exon

LOC111094510
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111094510
product: uncharacterized LOC111094510, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_005385590.1
SIO_010081: LOC111094510
subclass of: SO_0000673
so part of: LOC111094510
location: complement(join(2496539..2496705,2498675..2503151,2507115..2507620,2511969..2512045))
location: region:2496539-2512045:-1
so has part: feature:2511969-2512045:-1:exon
so has part: feature:2507115-2507620:-1:exon
so has part: feature:2498675-2503151:-1:exon
so has part: feature:2496539-2496705:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2511969-2512045:-1:exon

position:2511969:-1
position: 2511969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2507115-2507620:-1:exon

position:2507115:-1
position: 2507115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2507620:-1
position: 2507620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2498675-2503151:-1:exon

position:2498675:-1
position: 2498675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2503151:-1
position: 2503151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2496539-2496705:-1:exon

position:2496705:-1
position: 2496705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIR135B
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
alternative label: cfa-mir-135b
gene: MIR135B
gene synonym: cfa-mir-135b
note: microRNA mir-135b; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(2510395..2510483)
location: region:2510395-2510483:-1
so has part: feature:2510395-2510483:-1:exon
subclass of: SO_0000571

100885983
type: Gene
SIO_000068: ncbigene

MI0010334
type: miRBase
SIO_000068: mirbase

position:2510395:-1
position: 2510395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2510483:-1
position: 2510483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2510395-2510483:-1:exon

MIR135B
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9615
alternative label: cfa-mir-135b
gene: MIR135B
gene synonym: cfa-mir-135b
product: microRNA mir-135b
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_049427.1
SIO_010081: MIR135B
subclass of: SO_0000673
so part of: MIR135B
location: complement(2510395..2510483)
location: region:2510395-2510483:-1
so has part: feature:2510395-2510483:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2510395-2510483:-1:exon