Canis lupus familiaris isolate Mischka breed German Shepherd chromosome 29, alternate assembly UU_Cfam_GSD_1.0, whole genome shotgun sequence.
type: Entry
definition: Canis lupus familiaris isolate Mischka breed German Shepherd chromosome 29, alternate assembly UU_Cfam_GSD_1.0, whole genome shotgun sequence.
sequence version: NC_049250.1
sequence date: 2021-01-08
sequence: sequence
division: CON
label: NC_049250.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA643630
dblink: SAMN13230619
keyword: WGS
keyword: RefSeq
source: Canis lupus familiaris (dog)
organism: Canis lupus familiaris
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021990.1.\nAssembly name: UU_Cfam_GSD_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Uppsala University on\n2020/03/10. The original whole-genome shotgun project has the\naccession JAAHUQ000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Uppsala University\nAssembly Date :: JUN-2019\nAssembly Method :: FALCON v. 0.5.0\nAssembly Name :: UU_Cfam_GSD_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 100.0x\nSequencing Technology :: PacBio Sequel; Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Canis lupus familiaris Annotation\n Release 106\nAnnotation Version :: 106\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.5\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 42517134
topology: linear
so has quality: SO_0000987
location: 1..42517134
location: region:1-42517134:1
RO_0002162: 9615

NC_049250
type: RefSeq
SIO_000068: refseq

PRJNA643630
type: BioProject
SIO_000068: bioproject

SAMN13230619
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:42517134:1
position: 42517134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-42517134:1:source
so part of: sequence
organism: Canis lupus familiaris
mol type: genomic DNA
isolate: Mischka
sub species: familiaris
chromosome: 29
sex: female
tissue type: blood
breed: German Shepherd

9615
type: Taxonomy
SIO_000068: taxonomy

PRKDC
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
alternative label: DNA-PKcs
gene: PRKDC
gene synonym: DNA-PKcs
note: protein kinase, DNA-activated, catalytic subunit; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(285564..503393)
location: region:285564-503393:-1
so has part: feature:285564-503393:-1:exon
subclass of: SO_0000010

474176
type: Gene
SIO_000068: ncbigene

position:285564:-1
position: 285564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:503393:-1
position: 503393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:285564-503393:-1:exon

PRKDC
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
alternative label: DNA-PKcs
gene: PRKDC
gene synonym: DNA-PKcs
product: protein kinase, DNA-activated, catalytic subunit
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001006651.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions, 1 frameshift compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001006651.2
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(285564..285769,293135..293274,294098..294286,295064..295265,295341..295412,295604..295693,298167..298259,298562..298782,299523..299590,301000..301204,306420..306563,306672..306759,307609..307820,310869..311029,312576..312756,313567..313760,315143..315317,324067..324256,339611..339722,341476..341584,342483..342707,343546..343734,344601..344739,347104..347309,357959..358138,361225..361356,363567..363679,368457..368669,369859..370048,372094..372301,373409..373507,374385..374558,375739..375888,375974..376098,378369..378480,384448..384579,385203..385354,388390..388533,396636..396755,396955..397089,399488..399636,400911..400983,402058..402123,402365..402533,403499..403677,407248..407455,416961..417088,420760..420927,421965..422069,422449..422634,431993..432196,433221..433379,433837..433969,434393..434604,435316..435539,439207..439461,443997..444130,445418..445517,447028..447122,455379..455605,458636..458743,464434..464586,465448..465611,467046..467136,469199..469305,480919..481078,481499..481618,482053..482139,482872..483031,483365..483480,485185..485337,486576..486701,487313..487362,487673..487841,488319..488483,490197..490343,490897..491054,491533..491563,491651..491706,497075..497174,497261..497373,497888..497996,498739..498813,501013..501105,501204..501280,503236..503393))
location: region:285564-503393:-1
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so has part: feature:490897-491054:-1:exon
so has part: feature:490197-490343:-1:exon
so has part: feature:488319-488483:-1:exon
so has part: feature:487673-487841:-1:exon
so has part: feature:487313-487362:-1:exon
so has part: feature:486576-486701:-1:exon
so has part: feature:485185-485337:-1:exon
so has part: feature:483365-483480:-1:exon
so has part: feature:482872-483031:-1:exon
so has part: feature:482053-482139:-1:exon
so has part: feature:481499-481618:-1:exon
so has part: feature:480919-481078:-1:exon
so has part: feature:469199-469305:-1:exon
so has part: feature:467046-467136:-1:exon
so has part: feature:465448-465611:-1:exon
so has part: feature:464434-464586:-1:exon
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so has part: feature:455379-455605:-1:exon
so has part: feature:447028-447122:-1:exon
so has part: feature:445418-445517:-1:exon
so has part: feature:443997-444130:-1:exon
so has part: feature:439207-439461:-1:exon
so has part: feature:435316-435539:-1:exon
so has part: feature:434393-434604:-1:exon
so has part: feature:433837-433969:-1:exon
so has part: feature:433221-433379:-1:exon
so has part: feature:431993-432196:-1:exon
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so has part: feature:421965-422069:-1:exon
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so has part: feature:416961-417088:-1:exon
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so has part: feature:400911-400983:-1:exon
so has part: feature:399488-399636:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:503236-503393:-1:exon

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urn:…
SIO_000300: 2
SIO_000628: feature:501204-501280:-1:exon

position:501204:-1
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position:501280:-1
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urn:…
SIO_000300: 3
SIO_000628: feature:501013-501105:-1:exon

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SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:497888-497996:-1:exon

position:497888:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:497261-497373:-1:exon

position:497261:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:497075-497174:-1:exon

position:497075:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:491651-491706:-1:exon

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urn:…
SIO_000300: 9
SIO_000628: feature:491533-491563:-1:exon

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urn:…
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SIO_000628: feature:490897-491054:-1:exon

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SIO_000300: 11
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urn:…
SIO_000300: 12
SIO_000628: feature:488319-488483:-1:exon

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SIO_000628: feature:487673-487841:-1:exon

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SIO_000628: feature:487313-487362:-1:exon

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SIO_000628: feature:486576-486701:-1:exon

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SIO_000300: 16
SIO_000628: feature:485185-485337:-1:exon

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SIO_000300: 17
SIO_000628: feature:483365-483480:-1:exon

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SIO_000628: feature:482872-483031:-1:exon

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SIO_000628: feature:482053-482139:-1:exon

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SIO_000628: feature:481499-481618:-1:exon

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SIO_000628: feature:464434-464586:-1:exon

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SIO_000628: feature:416961-417088:-1:exon

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SIO_000628: feature:402365-402533:-1:exon

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position:396755:-1
position: 396755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:388390-388533:-1:exon

position:388390:-1
position: 388390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:388533:-1
position: 388533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:385203-385354:-1:exon

position:385203:-1
position: 385203
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385354:-1
position: 385354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 51
SIO_000628: feature:384448-384579:-1:exon

position:384448:-1
position: 384448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:384579:-1
position: 384579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 52
SIO_000628: feature:378369-378480:-1:exon

position:378369:-1
position: 378369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:378480:-1
position: 378480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 53
SIO_000628: feature:375974-376098:-1:exon

position:375974:-1
position: 375974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:376098:-1
position: 376098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 54
SIO_000628: feature:375739-375888:-1:exon

position:375739:-1
position: 375739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:375888:-1
position: 375888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 55
SIO_000628: feature:374385-374558:-1:exon

position:374385:-1
position: 374385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:374558:-1
position: 374558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 56
SIO_000628: feature:373409-373507:-1:exon

position:373409:-1
position: 373409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:373507:-1
position: 373507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 57
SIO_000628: feature:372094-372301:-1:exon

position:372094:-1
position: 372094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:372301:-1
position: 372301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 58
SIO_000628: feature:369859-370048:-1:exon

position:369859:-1
position: 369859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370048:-1
position: 370048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 59
SIO_000628: feature:368457-368669:-1:exon

position:368457:-1
position: 368457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:368669:-1
position: 368669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 60
SIO_000628: feature:363567-363679:-1:exon

position:363567:-1
position: 363567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:363679:-1
position: 363679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 61
SIO_000628: feature:361225-361356:-1:exon

position:361225:-1
position: 361225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361356:-1
position: 361356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 62
SIO_000628: feature:357959-358138:-1:exon

position:357959:-1
position: 357959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358138:-1
position: 358138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 63
SIO_000628: feature:347104-347309:-1:exon

position:347104:-1
position: 347104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347309:-1
position: 347309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 64
SIO_000628: feature:344601-344739:-1:exon

position:344601:-1
position: 344601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:344739:-1
position: 344739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 65
SIO_000628: feature:343546-343734:-1:exon

position:343546:-1
position: 343546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:343734:-1
position: 343734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 66
SIO_000628: feature:342483-342707:-1:exon

position:342483:-1
position: 342483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342707:-1
position: 342707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 67
SIO_000628: feature:341476-341584:-1:exon

position:341476:-1
position: 341476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341584:-1
position: 341584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 68
SIO_000628: feature:339611-339722:-1:exon

position:339611:-1
position: 339611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339722:-1
position: 339722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 69
SIO_000628: feature:324067-324256:-1:exon

position:324067:-1
position: 324067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324256:-1
position: 324256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 70
SIO_000628: feature:315143-315317:-1:exon

position:315143:-1
position: 315143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315317:-1
position: 315317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 71
SIO_000628: feature:313567-313760:-1:exon

position:313567:-1
position: 313567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:313760:-1
position: 313760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 72
SIO_000628: feature:312576-312756:-1:exon

position:312576:-1
position: 312576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312756:-1
position: 312756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 73
SIO_000628: feature:310869-311029:-1:exon

position:310869:-1
position: 310869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311029:-1
position: 311029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 74
SIO_000628: feature:307609-307820:-1:exon

position:307609:-1
position: 307609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307820:-1
position: 307820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 75
SIO_000628: feature:306672-306759:-1:exon

position:306672:-1
position: 306672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306759:-1
position: 306759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 76
SIO_000628: feature:306420-306563:-1:exon

position:306420:-1
position: 306420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:306563:-1
position: 306563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 77
SIO_000628: feature:301000-301204:-1:exon

position:301000:-1
position: 301000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:301204:-1
position: 301204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 78
SIO_000628: feature:299523-299590:-1:exon

position:299523:-1
position: 299523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:299590:-1
position: 299590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 79
SIO_000628: feature:298562-298782:-1:exon

position:298562:-1
position: 298562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298782:-1
position: 298782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 80
SIO_000628: feature:298167-298259:-1:exon

position:298167:-1
position: 298167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:298259:-1
position: 298259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 81
SIO_000628: feature:295604-295693:-1:exon

position:295604:-1
position: 295604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295693:-1
position: 295693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 82
SIO_000628: feature:295341-295412:-1:exon

position:295341:-1
position: 295341
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295412:-1
position: 295412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 83
SIO_000628: feature:295064-295265:-1:exon

position:295064:-1
position: 295064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:295265:-1
position: 295265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 84
SIO_000628: feature:294098-294286:-1:exon

position:294098:-1
position: 294098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:294286:-1
position: 294286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 85
SIO_000628: feature:293135-293274:-1:exon

position:293135:-1
position: 293135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:293274:-1
position: 293274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 86
SIO_000628: feature:285564-285769:-1:exon

position:285769:-1
position: 285769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRKDC
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
alternative label: DNA-PKcs
gene: PRKDC
gene synonym: DNA-PKcs
inference: similar to AA sequence (same species):RefSeq:NP_001006652.2
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution, 1 frameshift compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: DNA-dependent protein kinase catalytic subunit
translation: MAESGSGARGSLLQLQESLSAGDRCSAAMASYQLIRGLGQECVLSSDPAVLALQTSLVFSKDFGLLVFVRKSLSIDEFRDCREEVLKFLYIFLEKIGQKITPYSLDIKTTCTSVYTKDKAAKCKIPALDLLIKLLRTLRSSRLMDEFSIGELFNKFYGELALKTKIQDTVLEKIYELLGVLAEVHPSEMINNSEKLFRAFLGELKIQMTSAIREPKLPVLAGCLKGLSSLMCNFTKSMEEDPQTSREIFDFALKAIRPQIDLKRYAVPLAGLCLFTLHASQFSTCLLDNYVSLFEVLSKWCSHTNVEMKKAAHSALESFLKQVSFMVAKDAEMHKSKLQYFMEQFYGIIRNMDSNSKDLSIAIRGYGLFAGPCKVINAKDVDFMYIELIQRCKQLFLTQIDTVDDHVYHMPSFLQSIASVLLYLDRVPEVYTPVLEHLMVAQIDSFPQYSPKMQSVCCKALVKVFLALGGKGPVLWNCISTVVHQGLIRICSKPVILQKGVESEPEEYRASGEVRTGKWKVPTYKDYLDLFRSLLSCDQMMDSLLADEAFLFVNSSLQNLNRLLYDEFVKSVLKIIEKLDLTLEKRNVGEHEDENEATGVWVIPTSDPAANLHPAKPKDFSAFINLVEFCRDILPEKHIEFFEPWVYSFAYELILQSTRLPLISGFYKLLSVAVRNAKKIKYFEGVGMKSQTQAPKDPEKYSCFALFAKFGKEVTVKMKQYKDELLASCLTFILSLPHDIIELDIRAYIPALQMAFKLGLSYTPLAEVGLNALEEWSVCICKHIIQPHYKDILPSLDGYLKTSALSDETKNNWEVSALSQAAQKGFNQVVLKHLKKTKNISSNEALSLEEIRIRVVQMLGFLGGQINKNLLTATSSDEMMKKCVAWDREKRLSFAVPFIEMKPVIYLDVFLPRVTELALSASDRQTKVAACELLHSMVMFMLGKATQMPECGQGFPPMYQLYKRTFPVLLRLACDVDQVTRQLYEPLVMQLIHWFTNNKKFESQDTVALLETILDGIVDPVDSTLRDFCGRCIREFLKWSIKQTTPQQQEKSPVNTKSLFKRLYSFALHPNAFKRLGASLAFNNIYREFREEESLVEQFVFEALVTYLESLALAHTDEKPLGTIRQCCDAIDHLRHIIEKKHVSLNKVKKRRRPRGFPPSASLCLLDMVQWLLAHCGRPQTECRHKSIELFYKFVPLLPGNKSPSLWLKDILKNKDTSFLINTFEGGGGSCDRPSGILVQPTLFHLQGPFSLRAALQWMDMLLAALECYNTFIEEKTLKAPDVLGTETQSSLWKAVAFFLDNIAMHDITAAEKCFGTGAAGHRPSPQEGERYNYSKCTIVVRIMEFTTTLLNTSPDGWKLLEEDLCNNKNFMTLLVKILCQPSSIGFNIGDVLVMNHLPDVCVNLMKALKKSPYKDTLEMCLKEKITVQSIEELCAVDLYGPDAYVDRATLASVVSACKQLHRAGVLHVVLPSQSADQRHSVGIKLLFLVYKSIAPGDEREYFPSLDPSCKRLASGLLELAFAFGGLCEHLVDLLLDTAVLSMPASGESQRNMVSFSHGEYFYSLFSEIINTELLRNLDMTVLKLMKSSVDNPKMVSAILNGMLDQSFRDRASRKQQGLKLASTILHNWKKWDSWWAKDSAPESKTAVLTLLAKILQIDSSVSFNTNHSAFPEVFTTYTSLLADSNLGLHLMGQAVILLPFFTNLTGGNLEDLEHVLEKLIVSNFPMKSEEFPVGTLRYSNYVDCMKKFLDALELSQSPVLLQLMTEILCREQQHVMEELFQSTFKKIARKSSCVTQLALLESVYRMFKRDDLLSNVTRQAFVDRSLLTLLWHCGLNALREFFGKIVVETIDVLKSRFTKLNESTFDTQITKKMGFYKMLDVMYSRLSKDDVHSKESKINQVFHGSCITEGNELTKTLIKLCYDAFTENMAGENQLLERRRLYHCAAYNCAISVICCVFTELKFYQGFLFSEKPEKNLLILENLIDLKRCYTFPIEVEVP…
SIO_010081: PRKDC
subclass of: SO_0000673
so part of: PRKDC
location: complement(join(285564..285769,293135..293274,294098..294286,295064..295265,295341..295412,295604..295693,298167..298259,298562..298782,299523..299590,301000..301204,306420..306563,306672..306759,307609..307820,310869..311029,312576..312756,313567..313760,315143..315317,324067..324256,339611..339722,341476..341584,342483..342707,343546..343734,344601..344739,347104..347309,357959..358138,361225..361356,363567..363679,368457..368669,369859..370048,372094..372301,373409..373507,374385..374558,375739..375888,375974..376098,378369..378480,384448..384579,385203..385354,388390..388533,396636..396755,396955..397089,399488..399636,400911..400983,402058..402123,402365..402533,403499..403677,407248..407455,416961..417088,420760..420927,421965..422069,422449..422634,431993..432196,433221..433379,433837..433969,434393..434604,435316..435539,439207..439461,443997..444130,445418..445517,447028..447122,455379..455605,458636..458743,464434..464586,465448..465611,467046..467136,469199..469305,480919..481078,481499..481618,482053..482139,482872..483031,483365..483480,485185..485337,486576..486701,487313..487362,487673..487841,488319..488483,490197..490343,490897..491054,491533..491563,491651..491706,497075..497174,497261..497373,497888..497996,498739..498813,501013..501105,501204..501280,503236..503389))
location: region:285564-503389:-1
so has part: feature:503236-503389:-1:exon
so has part: feature:501204-501280:-1:exon
so has part: feature:501013-501105:-1:exon
so has part: feature:498739-498813:-1:exon
so has part: feature:497888-497996:-1:exon
so has part: feature:497261-497373:-1:exon
so has part: feature:497075-497174:-1:exon
so has part: feature:491651-491706:-1:exon
so has part: feature:491533-491563:-1:exon
so has part: feature:490897-491054:-1:exon
so has part: feature:490197-490343:-1:exon
so has part: feature:488319-488483:-1:exon
so has part: feature:487673-487841:-1:exon
so has part: feature:487313-487362:-1:exon
so has part: feature:486576-486701:-1:exon
so has part: feature:485185-485337:-1:exon
so has part: feature:483365-483480:-1:exon
so has part: feature:482872-483031:-1:exon
so has part: feature:482053-482139:-1:exon
so has part: feature:481499-481618:-1:exon
so has part: feature:480919-481078:-1:exon
so has part: feature:469199-469305:-1:exon
so has part: feature:467046-467136:-1:exon
so has part: feature:465448-465611:-1:exon
so has part: feature:464434-464586:-1:exon
so has part: feature:458636-458743:-1:exon
so has part: feature:455379-455605:-1:exon
so has part: feature:447028-447122:-1:exon
so has part: feature:445418-445517:-1:exon
so has part: feature:443997-444130:-1:exon
so has part: feature:439207-439461:-1:exon
so has part: feature:435316-435539:-1:exon
so has part: feature:434393-434604:-1:exon
so has part: feature:433837-433969:-1:exon
so has part: feature:433221-433379:-1:exon
so has part: feature:431993-432196:-1:exon
so has part: feature:422449-422634:-1:exon
so has part: feature:421965-422069:-1:exon
so has part: feature:420760-420927:-1:exon
so has part: feature:416961-417088:-1:exon
so has part: feature:407248-407455:-1:exon
so has part: feature:403499-403677:-1:exon
so has part: feature:402365-402533:-1:exon
so has part: feature:402058-402123:-1:exon
so has part: feature:400911-400983:-1:exon
so has part: feature:399488-399636:-1:exon
so has part: feature:396955-397089:-1:exon
so has part: feature:396636-396755:-1:exon
so has part: feature:388390-388533:-1:exon
so has part: feature:385203-385354:-1:exon
so has part: feature:384448-384579:-1:exon
so has part: feature:378369-378480:-1:exon
so has part: feature:375974-376098:-1:exon
so has part: feature:375739-375888:-1:exon
so has part: feature:374385-374558:-1:exon
so has part: feature:373409-373507:-1:exon
so has part: feature:372094-372301:-1:exon
so has part: feature:369859-370048:-1:exon
so has part: feature:368457-368669:-1:exon
so has part: feature:363567-363679:-1:exon
so has part: feature:361225-361356:-1:exon
so has part: feature:357959-358138:-1:exon

NP_001006652.2
type: Protein
SIO_000068: ncbiprotein

position:503389:-1
position: 503389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:503236-503389:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:501204-501280:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:501013-501105:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:498739-498813:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:497888-497996:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:497261-497373:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:497075-497174:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:491651-491706:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:491533-491563:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:490897-491054:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:490197-490343:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:488319-488483:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:487673-487841:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:487313-487362:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:486576-486701:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:485185-485337:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:483365-483480:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:482872-483031:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:482053-482139:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:481499-481618:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:480919-481078:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:469199-469305:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:467046-467136:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:465448-465611:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:464434-464586:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:458636-458743:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:455379-455605:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:447028-447122:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:445418-445517:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:443997-444130:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:439207-439461:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:435316-435539:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:434393-434604:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:433837-433969:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:433221-433379:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:431993-432196:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:422449-422634:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:421965-422069:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:420760-420927:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:416961-417088:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:407248-407455:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:403499-403677:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:402365-402533:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:402058-402123:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:400911-400983:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:399488-399636:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:396955-397089:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:396636-396755:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:388390-388533:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:385203-385354:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:384448-384579:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:378369-378480:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:375974-376098:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:375739-375888:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:374385-374558:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:373409-373507:-1:exon

urn:…
SIO_000300: 57
SIO_000628: feature:372094-372301:-1:exon

urn:…
SIO_000300: 58
SIO_000628: feature:369859-370048:-1:exon

urn:…
SIO_000300: 59
SIO_000628: feature:368457-368669:-1:exon

urn:…
SIO_000300: 60
SIO_000628: feature:363567-363679:-1:exon

urn:…
SIO_000300: 61
SIO_000628: feature:361225-361356:-1:exon

urn:…
SIO_000300: 62
SIO_000628: feature:357959-358138:-1:exon

urn:…
SIO_000300: 63
SIO_000628: feature:347104-347309:-1:exon

urn:…
SIO_000300: 64
SIO_000628: feature:344601-344739:-1:exon

urn:…
SIO_000300: 65
SIO_000628: feature:343546-343734:-1:exon

urn:…
SIO_000300: 66
SIO_000628: feature:342483-342707:-1:exon

urn:…
SIO_000300: 67
SIO_000628: feature:341476-341584:-1:exon

urn:…
SIO_000300: 68
SIO_000628: feature:339611-339722:-1:exon

urn:…
SIO_000300: 69
SIO_000628: feature:324067-324256:-1:exon

urn:…
SIO_000300: 70
SIO_000628: feature:315143-315317:-1:exon

urn:…
SIO_000300: 71
SIO_000628: feature:313567-313760:-1:exon

urn:…
SIO_000300: 72
SIO_000628: feature:312576-312756:-1:exon

urn:…
SIO_000300: 73
SIO_000628: feature:310869-311029:-1:exon

urn:…
SIO_000300: 74
SIO_000628: feature:307609-307820:-1:exon

urn:…
SIO_000300: 75
SIO_000628: feature:306672-306759:-1:exon

urn:…
SIO_000300: 76
SIO_000628: feature:306420-306563:-1:exon

urn:…
SIO_000300: 77
SIO_000628: feature:301000-301204:-1:exon

urn:…
SIO_000300: 78
SIO_000628: feature:299523-299590:-1:exon

urn:…
SIO_000300: 79
SIO_000628: feature:298562-298782:-1:exon

urn:…
SIO_000300: 80
SIO_000628: feature:298167-298259:-1:exon

urn:…
SIO_000300: 81
SIO_000628: feature:295604-295693:-1:exon

urn:…
SIO_000300: 82
SIO_000628: feature:295341-295412:-1:exon

urn:…
SIO_000300: 83
SIO_000628: feature:295064-295265:-1:exon

urn:…
SIO_000300: 84
SIO_000628: feature:294098-294286:-1:exon

urn:…
SIO_000300: 85
SIO_000628: feature:293135-293274:-1:exon

urn:…
SIO_000300: 86
SIO_000628: feature:285564-285769:-1:exon

MCM4
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: MCM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 504123..521263
location: region:504123-521263:1
so has part: feature:504123-521263:1:exon
subclass of: SO_0000010

477871
type: Gene
SIO_000068: ncbigene

position:504123:1
position: 504123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521263:1
position: 521263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504123-521263:1:exon

MCM4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MCM4
product: minichromosome maintenance complex component 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579263.1
SIO_010081: MCM4
subclass of: SO_0000673
so part of: MCM4
location: join(504123..504323,504696..504860,505161..505324,505419..505520,506023..506118,506200..506295,507700..507838,508804..509024,512544..512664,514059..514318,514759..515124,515584..515711,516697..516904,518267..518495,519700..519833,520616..521263)
location: region:504123-521263:1
so has part: feature:504123-504323:1:exon
so has part: feature:504696-504860:1:exon
so has part: feature:505161-505324:1:exon
so has part: feature:505419-505520:1:exon
so has part: feature:506023-506118:1:exon
so has part: feature:506200-506295:1:exon
so has part: feature:507700-507838:1:exon
so has part: feature:508804-509024:1:exon
so has part: feature:512544-512664:1:exon
so has part: feature:514059-514318:1:exon
so has part: feature:514759-515124:1:exon
so has part: feature:515584-515711:1:exon
so has part: feature:516697-516904:1:exon
so has part: feature:518267-518495:1:exon
so has part: feature:519700-519833:1:exon
so has part: feature:520616-521263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:504123-504323:1:exon

position:504323:1
position: 504323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:504696-504860:1:exon

position:504696:1
position: 504696
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504860:1
position: 504860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:505161-505324:1:exon

position:505161:1
position: 505161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505324:1
position: 505324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:505419-505520:1:exon

position:505419:1
position: 505419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505520:1
position: 505520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:506023-506118:1:exon

position:506023:1
position: 506023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506118:1
position: 506118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:506200-506295:1:exon

position:506200:1
position: 506200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506295:1
position: 506295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:507700-507838:1:exon

position:507700:1
position: 507700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507838:1
position: 507838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:508804-509024:1:exon

position:508804:1
position: 508804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509024:1
position: 509024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:512544-512664:1:exon

position:512544:1
position: 512544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:512664:1
position: 512664
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:514059-514318:1:exon

position:514059:1
position: 514059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:514318:1
position: 514318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:514759-515124:1:exon

position:514759:1
position: 514759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515124:1
position: 515124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:515584-515711:1:exon

position:515584:1
position: 515584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515711:1
position: 515711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:516697-516904:1:exon

position:516697:1
position: 516697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516904:1
position: 516904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:518267-518495:1:exon

position:518267:1
position: 518267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518495:1
position: 518495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:519700-519833:1:exon

position:519700:1
position: 519700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:519833:1
position: 519833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:520616-521263:1:exon

position:520616:1
position: 520616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MCM4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MCM4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: DNA replication licensing factor MCM4 isoform X1
translation: MSSPASTPSRRGSRRGRTTPAQTPRSEDARSSPHQRRRGDDSTSTGELQPMPTSPGADLHSPAAHDALFSSPAQIQPSTIPLDFDVSSPLTYGTPSSRVDGTPRSGVRGTPVRQRPDLGSARKGLQVDLQTEVPATEDIVASEQALGQKLVIWGTDVNVATCKENFQRFLQHFIDPLAKEEETIGIDITEPLYMQRLGEINVIGEPFLNVNCEHIQSFDKNLYRQLICYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKNMRNLNPDDIDQLIAISGMVIRTSQLIPEMQEAFFQCQVCAHTARVEIDRGRIAEPSVCEHCHTTHSMALIHNRSVFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKVQPGDRVNITGIYRAVPIRVSSRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSILAAANPVESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVALYYRSEEQMEEEFMDMAVLKDYIAYAHSMVMPQLSQEASQALIEAYVDMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSSKVEAVDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALKKLILSKGKTPALKYQQLFEDIRGQSDIAITKDMFEEALRALADDDFLTVTGKTVRLL
SIO_010081: MCM4
subclass of: SO_0000673
so part of: MCM4
location: join(504254..504323,504696..504860,505161..505324,505419..505520,506023..506118,506200..506295,507700..507838,508804..509024,512544..512664,514059..514318,514759..515124,515584..515711,516697..516904,518267..518495,519700..519833,520616..520708)
location: region:504254-520708:1
so has part: feature:504254-504323:1:exon
so has part: feature:504696-504860:1:exon
so has part: feature:505161-505324:1:exon
so has part: feature:505419-505520:1:exon
so has part: feature:506023-506118:1:exon
so has part: feature:506200-506295:1:exon
so has part: feature:507700-507838:1:exon
so has part: feature:508804-509024:1:exon
so has part: feature:512544-512664:1:exon
so has part: feature:514059-514318:1:exon
so has part: feature:514759-515124:1:exon
so has part: feature:515584-515711:1:exon
so has part: feature:516697-516904:1:exon
so has part: feature:518267-518495:1:exon
so has part: feature:519700-519833:1:exon
so has part: feature:520616-520708:1:exon

XP_038435191.1
type: Protein
SIO_000068: ncbiprotein

position:504254:1
position: 504254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:520708:1
position: 520708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:504254-504323:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:504696-504860:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:505161-505324:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:505419-505520:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:506023-506118:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:506200-506295:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:507700-507838:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:508804-509024:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:512544-512664:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:514059-514318:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:514759-515124:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:515584-515711:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:516697-516904:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:518267-518495:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:519700-519833:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:520616-520708:1:exon

UBE2V2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: UBE2V2
note: ubiquitin conjugating enzyme E2 V2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 567077..617090
location: region:567077-617090:1
so has part: feature:567077-617090:1:exon
subclass of: SO_0000010

608470
type: Gene
SIO_000068: ncbigene

position:567077:1
position: 567077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:617090:1
position: 617090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567077-617090:1:exon

UBE2V2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: UBE2V2
product: ubiquitin conjugating enzyme E2 V2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001205115.1
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(567077..567112,598720..598868,603917..604042,615876..617090)
location: region:567077-617090:1
so has part: feature:567077-567112:1:exon
so has part: feature:598720-598868:1:exon
so has part: feature:603917-604042:1:exon
so has part: feature:615876-617090:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:567077-567112:1:exon

position:567112:1
position: 567112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:598720-598868:1:exon

position:598720:1
position: 598720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:598868:1
position: 598868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:603917-604042:1:exon

position:603917:1
position: 603917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:604042:1
position: 604042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:615876-617090:1:exon

position:615876:1
position: 615876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

UBE2V2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: UBE2V2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ubiquitin-conjugating enzyme E2 variant 2
translation: MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN
SIO_010081: UBE2V2
subclass of: SO_0000673
so part of: UBE2V2
location: join(567097..567112,598720..598868,603917..604042,615876..616022)
location: region:567097-616022:1
so has part: feature:567097-567112:1:exon
so has part: feature:598720-598868:1:exon
so has part: feature:603917-604042:1:exon
so has part: feature:615876-616022:1:exon

NP_001192044.1
type: Protein
SIO_000068: ncbiprotein

position:567097:1
position: 567097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:616022:1
position: 616022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:567097-567112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:598720-598868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:603917-604042:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615876-616022:1:exon

LOC100684842
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100684842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(580587..580898)
location: region:580587-580898:-1
so has part: feature:580587-580898:-1:exon
subclass of: SO_0000010

100684842
type: Gene
SIO_000068: ncbigene

position:580587:-1
position: 580587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580898:-1
position: 580898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580587-580898:-1:exon

LOC100684842
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC100684842
product: cytochrome c oxidase subunit 7B, mitochondrial-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038579264.1
SIO_010081: LOC100684842
subclass of: SO_0000673
so part of: LOC100684842
location: complement(580587..580898)
location: region:580587-580898:-1
so has part: feature:580587-580898:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:580587-580898:-1:exon

LOC100684842
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC100684842
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase subunit 7B, mitochondrial-like
translation: MFPMARIALSHLGVQSIPQTMARQSHQKWAPDFHDKYGNAVLASGATFCIAVWAYTAAQIGIEWNLSPVGRVTPKEWRDQ
SIO_010081: LOC100684842
subclass of: SO_0000673
so part of: LOC100684842
location: complement(580619..580861)
location: region:580619-580861:-1
so has part: feature:580619-580861:-1:exon

XP_038435192.1
type: Protein
SIO_000068: ncbiprotein

position:580619:-1
position: 580619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:580861:-1
position: 580861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:580619-580861:-1:exon

LOC100856084
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100856084
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(693056..697639)
location: region:693056-697639:-1
so has part: feature:693056-697639:-1:exon

100856084
type: Gene
SIO_000068: ncbigene

position:693056:-1
position: 693056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:697639:-1
position: 697639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693056-697639:-1:exon

LOC100856084
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100856084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC100856084
subclass of: SO_0000673
so part of: LOC100856084
location: complement(693056..693990)
location: region:693056-693990:-1
so has part: feature:693056-693990:-1:exon

position:693990:-1
position: 693990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:693056-693990:-1:exon

LOC100856084
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100856084
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC100856084
subclass of: SO_0000673
so part of: LOC100856084
location: complement(697619..697639)
location: region:697619-697639:-1
so has part: feature:697619-697639:-1:exon

position:697619:-1
position: 697619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:697619-697639:-1:exon

LOC111093117
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093117
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 843827..847931
location: region:843827-847931:1
so has part: feature:843827-847931:1:exon
subclass of: SO_0000011

111093117
type: Gene
SIO_000068: ncbigene

position:843827:1
position: 843827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:847931:1
position: 847931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:843827-847931:1:exon

LOC111093117
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093117
product: uncharacterized LOC111093117
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380831.1
SIO_010081: LOC111093117
subclass of: SO_0000673
so part of: LOC111093117
location: join(843827..843922,845437..845524,847805..847931)
location: region:843827-847931:1
so has part: feature:843827-843922:1:exon
so has part: feature:845437-845524:1:exon
so has part: feature:847805-847931:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:843827-843922:1:exon

position:843922:1
position: 843922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:845437-845524:1:exon

position:845437:1
position: 845437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845524:1
position: 845524
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:847805-847931:1:exon

position:847805:1
position: 847805
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111093200
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093200
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(889026..902564)
location: region:889026-902564:-1
so has part: feature:889026-902564:-1:exon
subclass of: SO_0000011

111093200
type: Gene
SIO_000068: ncbigene

position:889026:-1
position: 889026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902564:-1
position: 902564
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:889026-902564:-1:exon

LOC111093200
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093200
product: uncharacterized LOC111093200, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380932.1
SIO_010081: LOC111093200
subclass of: SO_0000673
so part of: LOC111093200
location: complement(join(889026..889761,891073..894375,894897..895042,901890..902055,902224..902564))
location: region:889026-902564:-1
so has part: feature:902224-902564:-1:exon
so has part: feature:901890-902055:-1:exon
so has part: feature:894897-895042:-1:exon
so has part: feature:891073-894375:-1:exon
so has part: feature:889026-889761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:902224-902564:-1:exon

position:902224:-1
position: 902224
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:901890-902055:-1:exon

position:901890:-1
position: 901890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:902055:-1
position: 902055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:894897-895042:-1:exon

position:894897:-1
position: 894897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:895042:-1
position: 895042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:891073-894375:-1:exon

position:891073:-1
position: 891073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:894375:-1
position: 894375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:889026-889761:-1:exon

position:889761:-1
position: 889761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111093200
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093200
product: uncharacterized LOC111093200, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380931.1
SIO_010081: LOC111093200
subclass of: SO_0000673
so part of: LOC111093200
location: complement(join(889026..889761,891073..894375,894897..895042,901890..902564))
location: region:889026-902564:-1
so has part: feature:901890-902564:-1:exon
so has part: feature:894897-895042:-1:exon
so has part: feature:891073-894375:-1:exon
so has part: feature:889026-889761:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:901890-902564:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:894897-895042:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:891073-894375:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:889026-889761:-1:exon

LOC111093197
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093197
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 926002..929680
location: region:926002-929680:1
so has part: feature:926002-929680:1:exon
subclass of: SO_0000011

111093197
type: Gene
SIO_000068: ncbigene

position:926002:1
position: 926002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:929680:1
position: 929680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:926002-929680:1:exon

LOC111093197
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093197
product: uncharacterized LOC111093197
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XR_005380832.1
SIO_010081: LOC111093197
subclass of: SO_0000673
so part of: LOC111093197
location: join(926002..926614,929393..929680)
location: region:926002-929680:1
so has part: feature:926002-926614:1:exon
so has part: feature:929393-929680:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:926002-926614:1:exon

position:926614:1
position: 926614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:929393-929680:1:exon

position:929393:1
position: 929393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

EFCAB1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1203459..1226090)
location: region:1203459-1226090:-1
so has part: feature:1203459-1226090:-1:exon
subclass of: SO_0000010

477872
type: Gene
SIO_000068: ncbigene

position:1203459:-1
position: 1203459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226090:-1
position: 1226090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203459-1226090:-1:exon

EFCAB1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005380938.1
SIO_010081: EFCAB1
so part of: EFCAB1
location: complement(join(1203459..1203589,1203677..1203785,1206636..1206718,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1203459-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1206636-1206718:-1:exon
so has part: feature:1203677-1203785:-1:exon
so has part: feature:1203459-1203589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

position:1225964:-1
position: 1225964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

position:1222243:-1
position: 1222243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222401:-1
position: 1222401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

position:1221220:-1
position: 1221220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1221324:-1
position: 1221324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

position:1220380:-1
position: 1220380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220531:-1
position: 1220531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

position:1220000:-1
position: 1220000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1220104:-1
position: 1220104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

position:1217456:-1
position: 1217456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1217541:-1
position: 1217541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1206636-1206718:-1:exon

position:1206636:-1
position: 1206636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206718:-1
position: 1206718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1203677-1203785:-1:exon

position:1203677:-1
position: 1203677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203785:-1
position: 1203785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1203459-1203589:-1:exon

position:1203589:-1
position: 1203589
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005380937.1
SIO_010081: EFCAB1
so part of: EFCAB1
location: complement(join(1203459..1203589,1203677..1203785,1206636..1206718,1212103..1212238,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1203459-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1212103-1212238:-1:exon
so has part: feature:1206636-1206718:-1:exon
so has part: feature:1203677-1203785:-1:exon
so has part: feature:1203459-1203589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212103-1212238:-1:exon

position:1212103:-1
position: 1212103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212238:-1
position: 1212238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1206636-1206718:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1203677-1203785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1203459-1203589:-1:exon

EFCAB1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005380935.1
SIO_010081: EFCAB1
so part of: EFCAB1
location: complement(join(1203459..1203589,1203677..1203785,1206636..1206718,1210015..1210145,1212103..1212238,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1203459-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1212103-1212238:-1:exon
so has part: feature:1210015-1210145:-1:exon
so has part: feature:1206636-1206718:-1:exon
so has part: feature:1203677-1203785:-1:exon
so has part: feature:1203459-1203589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212103-1212238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210015-1210145:-1:exon

position:1210015:-1
position: 1210015
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1210145:-1
position: 1210145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1206636-1206718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1203677-1203785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203459-1203589:-1:exon

EFCAB1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005380936.1
SIO_010081: EFCAB1
so part of: EFCAB1
location: complement(join(1203459..1203589,1203677..1203785,1210015..1210159,1212103..1212238,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1203459-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1212103-1212238:-1:exon
so has part: feature:1210015-1210159:-1:exon
so has part: feature:1203677-1203785:-1:exon
so has part: feature:1203459-1203589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212103-1212238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210015-1210159:-1:exon

position:1210159:-1
position: 1210159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1203677-1203785:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1203459-1203589:-1:exon

EFCAB1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_005380934.1
SIO_010081: EFCAB1
so part of: EFCAB1
location: complement(join(1203459..1203589,1203677..1203785,1206636..1206718,1210015..1210159,1212103..1212238,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1203459-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1212103-1212238:-1:exon
so has part: feature:1210015-1210159:-1:exon
so has part: feature:1206636-1206718:-1:exon
so has part: feature:1203677-1203785:-1:exon
so has part: feature:1203459-1203589:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212103-1212238:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1210015-1210159:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1206636-1206718:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1203677-1203785:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1203459-1203589:-1:exon

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_038579266.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1212245..1212863,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1212245-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1212245-1212863:-1:exon

position:1212245:-1
position: 1212245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1212245-1212863:-1:exon

position:1212863:-1
position: 1212863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038579267.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1213541..1213803,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1213541-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1213541-1213803:-1:exon

position:1213541:-1
position: 1213541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1213541-1213803:-1:exon

position:1213803:-1
position: 1213803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038579268.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1215977..1216251,1217456..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1215977-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217456-1217541:-1:exon
so has part: feature:1215977-1216251:-1:exon

position:1215977:-1
position: 1215977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217456-1217541:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1215977-1216251:-1:exon

position:1216251:-1
position: 1216251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_038579270.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217433..1217541,1220000..1220104,1220380..1220531,1222243..1222401,1225964..1226090))
location: region:1217433-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217433-1217541:-1:exon

position:1217433:-1
position: 1217433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217433-1217541:-1:exon

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038579265.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217433..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226090))
location: region:1217433-1226090:-1
so has part: feature:1225964-1226090:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217433-1217541:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226090:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217433-1217541:-1:exon

EFCAB1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: EFCAB1
product: EF-hand calcium binding domain 1, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038579269.1
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217433..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225431..1225568))
location: region:1217433-1225568:-1
so has part: feature:1225431-1225568:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217433-1217541:-1:exon

position:1225568:-1
position: 1225568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225431-1225568:-1:exon

position:1225431:-1
position: 1225431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217433-1217541:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1 isoform X3
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRDCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217482..1217541,1220000..1220104,1220380..1220531,1222243..1222401,1225964..1226021))
location: region:1217482-1226021:-1
so has part: feature:1225964-1226021:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217482-1217541:-1:exon

XP_038435198.1
type: Protein
SIO_000068: ncbiprotein

position:1217482:-1
position: 1217482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1226021:-1
position: 1226021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217482-1217541:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1 isoform X1
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217482..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226021))
location: region:1217482-1226021:-1
so has part: feature:1225964-1226021:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217482-1217541:-1:exon

XP_038435193.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217482-1217541:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1 isoform X1
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217482..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226021))
location: region:1217482-1226021:-1
so has part: feature:1225964-1226021:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217482-1217541:-1:exon

XP_038435194.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217482-1217541:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1 isoform X1
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217482..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226021))
location: region:1217482-1226021:-1
so has part: feature:1225964-1226021:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217482-1217541:-1:exon

XP_038435195.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217482-1217541:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1 isoform X1
translation: MNRKKLQKLTDTLTKNCKNFNKFEVKCLIDLFYNLMGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217482..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222401,1225964..1226021))
location: region:1217482-1226021:-1
so has part: feature:1225964-1226021:-1:exon
so has part: feature:1222243-1222401:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217482-1217541:-1:exon

XP_038435196.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1225964-1226021:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1222243-1222401:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1217482-1217541:-1:exon

EFCAB1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: EFCAB1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: EF-hand calcium-binding domain-containing protein 1 isoform X2
translation: MGEVTERQGITIGLDRNAFRNILHMTFGMTDDMIMDRVFRGFDEDNDGYVNVSEWIYGLSVFLRGTLEEKMKYCFEVFDLNGDGFISKEEMFHMLKNSLLKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFTDYEQAVREETLLLEAFGPCLPDPKSQMEFEAQVFKDPNEFNDI
SIO_010081: EFCAB1
subclass of: SO_0000673
so part of: EFCAB1
location: complement(join(1217482..1217541,1220000..1220104,1220380..1220531,1221220..1221324,1222243..1222354))
location: region:1217482-1222354:-1
so has part: feature:1222243-1222354:-1:exon
so has part: feature:1221220-1221324:-1:exon
so has part: feature:1220380-1220531:-1:exon
so has part: feature:1220000-1220104:-1:exon
so has part: feature:1217482-1217541:-1:exon

XP_038435197.1
type: Protein
SIO_000068: ncbiprotein

position:1222354:-1
position: 1222354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222243-1222354:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1221220-1221324:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1220380-1220531:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1220000-1220104:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1217482-1217541:-1:exon

LOC102152773
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102152773
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1225176..1250569
location: region:1225176-1250569:1
so has part: feature:1225176-1250569:1:exon
subclass of: SO_0000011

102152773
type: Gene
SIO_000068: ncbigene

position:1225176:1
position: 1225176
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1250569:1
position: 1250569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225176-1250569:1:exon

LOC102152773
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102152773
product: uncharacterized LOC102152773, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_005380939.1
SIO_010081: LOC102152773
subclass of: SO_0000673
so part of: LOC102152773
location: join(1225176..1225594,1237999..1238104,1249417..1250569)
location: region:1225176-1250569:1
so has part: feature:1225176-1225594:1:exon
so has part: feature:1237999-1238104:1:exon
so has part: feature:1249417-1250569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225176-1225594:1:exon

position:1225594:1
position: 1225594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237999-1238104:1:exon

position:1237999:1
position: 1237999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1238104:1
position: 1238104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1249417-1250569:1:exon

position:1249417:1
position: 1249417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102152773
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102152773
product: uncharacterized LOC102152773, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380941.1
SIO_010081: LOC102152773
subclass of: SO_0000673
so part of: LOC102152773
location: join(1225176..1225594,1237999..1238104,1249417..1249579,1250016..1250569)
location: region:1225176-1250569:1
so has part: feature:1225176-1225594:1:exon
so has part: feature:1237999-1238104:1:exon
so has part: feature:1249417-1249579:1:exon
so has part: feature:1250016-1250569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1225176-1225594:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1237999-1238104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1249417-1249579:1:exon

position:1249579:1
position: 1249579
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1250016-1250569:1:exon

position:1250016:1
position: 1250016
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102152773
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102152773
product: uncharacterized LOC102152773, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005380940.1
SIO_010081: LOC102152773
subclass of: SO_0000673
so part of: LOC102152773
location: join(1225669..1225804,1237999..1238104,1249417..1250569)
location: region:1225669-1250569:1
so has part: feature:1225669-1225804:1:exon
so has part: feature:1237999-1238104:1:exon
so has part: feature:1249417-1250569:1:exon

position:1225669:1
position: 1225669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1225669-1225804:1:exon

position:1225804:1
position: 1225804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1237999-1238104:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1249417-1250569:1:exon

LOC119866663
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1371868..1375477)
location: region:1371868-1375477:-1
so has part: feature:1371868-1375477:-1:exon
subclass of: SO_0000010

119866663
type: Gene
SIO_000068: ncbigene

position:1371868:-1
position: 1371868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1375477:-1
position: 1375477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1371868-1375477:-1:exon

LOC119866663
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC119866663
product: translation initiation factor IF-2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038579236.1
SIO_010081: LOC119866663
subclass of: SO_0000673
so part of: LOC119866663
location: complement(join(1371868..1372955,1373090..1373325,1374041..1375477))
location: region:1371868-1375477:-1
so has part: feature:1374041-1375477:-1:exon
so has part: feature:1373090-1373325:-1:exon
so has part: feature:1371868-1372955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1374041-1375477:-1:exon

position:1374041:-1
position: 1374041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1373090-1373325:-1:exon

position:1373090:-1
position: 1373090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1373325:-1
position: 1373325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1371868-1372955:-1:exon

position:1372955:-1
position: 1372955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119866663
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: LOC119866663
product: translation initiation factor IF-2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005380833.1
SIO_010081: LOC119866663
so part of: LOC119866663
location: complement(join(1371868..1372955,1373090..1373325,1374025..1375477))
location: region:1371868-1375477:-1
so has part: feature:1374025-1375477:-1:exon
so has part: feature:1373090-1373325:-1:exon
so has part: feature:1371868-1372955:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1374025-1375477:-1:exon

position:1374025:-1
position: 1374025
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1373090-1373325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1371868-1372955:-1:exon

LOC119866663
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC119866663
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: translation initiation factor IF-2-like
translation: MGGKGMWTPAPTTPSVPSCRRLPVGVEAGAEAGLGAPPPPVSPRLCHSGASGRCLEEACPTSRKEVTQARPTRDLLRQRDDGAQPWPRSPRTPAPPAAPGSGGAAHSRPRAEGAPCPAVLPGLRLGRRVRRQDAHRASPGNKAAQRGRRPGPPDDKSLPGPTFLRGQAQTAGADPTVPGALCTPKCTPGIHSCLCLCISRADIYAHQTPHHPQLKQDSLLGCGDHLNPLGPAFGTPEHHENELPDLNIRIPVEVCSKEQVLSTETEAQGVYTSTSKHTSHMPSEGRNKTSL
SIO_010081: LOC119866663
subclass of: SO_0000673
so part of: LOC119866663
location: complement(join(1372826..1372955,1373090..1373325,1374041..1374550))
location: region:1372826-1374550:-1
so has part: feature:1374041-1374550:-1:exon
so has part: feature:1373090-1373325:-1:exon
so has part: feature:1372826-1372955:-1:exon

XP_038435164.1
type: Protein
SIO_000068: ncbiprotein

position:1372826:-1
position: 1372826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1374550:-1
position: 1374550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1374041-1374550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1373090-1373325:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1372826-1372955:-1:exon

LOC111093123
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093123
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1396921..1399340)
location: region:1396921-1399340:-1
so has part: feature:1396921-1399340:-1:exon

111093123
type: Gene
SIO_000068: ncbigene

position:1396921:-1
position: 1396921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1399340:-1
position: 1399340
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1396921-1399340:-1:exon

LOC111093123
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC111093123
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111093123
subclass of: SO_0000673
so part of: LOC111093123
location: complement(1396921..1397756)
location: region:1396921-1397756:-1
so has part: feature:1396921-1397756:-1:exon

position:1397756:-1
position: 1397756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1396921-1397756:-1:exon

LOC111093123
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC111093123
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 21% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC111093123
subclass of: SO_0000673
so part of: LOC111093123
location: complement(1399248..1399340)
location: region:1399248-1399340:-1
so has part: feature:1399248-1399340:-1:exon

position:1399248:-1
position: 1399248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1399248-1399340:-1:exon

SNAI2
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
alternative label: SLUG
gene: SNAI2
gene synonym: SLUG
note: snail family transcriptional repressor 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1416068..1418591)
location: region:1416068-1418591:-1
so has part: feature:1416068-1418591:-1:exon
subclass of: SO_0000010

486940
type: Gene
SIO_000068: ncbigene

position:1416068:-1
position: 1416068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418591:-1
position: 1418591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1416068-1418591:-1:exon

SNAI2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
alternative label: SLUG
gene: SNAI2
gene synonym: SLUG
product: snail family transcriptional repressor 2
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001097981.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001097981.1
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1416068..1416249,1417150..1417695,1418513..1418591))
location: region:1416068-1418591:-1
so has part: feature:1418513-1418591:-1:exon
so has part: feature:1417150-1417695:-1:exon
so has part: feature:1416068-1416249:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1418513-1418591:-1:exon

position:1418513:-1
position: 1418513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1417150-1417695:-1:exon

position:1417150:-1
position: 1417150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1417695:-1
position: 1417695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1416068-1416249:-1:exon

position:1416249:-1
position: 1416249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SNAI2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
alternative label: SLUG
gene: SNAI2
gene synonym: SLUG
inference: similar to AA sequence (same species):RefSeq:NP_001091450.1
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 1 substitution compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: zinc finger protein SNAI2
translation: MARSFLVKKHFNASKKPNYGELDTHTVIISPYLYESYPMPVIPQPEILSSGAYSPITVWTTAAPFHSPLPNGLSSLSGYPSSLGRVSPPPPSDTSSKDHSGSESPISDEEERLQSKLSDPHAIEAEKFQCNLCNKTYSTFSGLAKHKQLHCDAQSRKSFSCKYCDKEYVSLGALKMHIRTHTLPCVCKICGKAFSRPWLLQGHIRTHTGEKPFSCPHCNRAFADRSNLRAHLQTHSDVKKYQCKNCSKTFSRMSLLHKHEESGCCVAH
SIO_010081: SNAI2
subclass of: SO_0000673
so part of: SNAI2
location: complement(join(1416068..1416249,1417150..1417695,1418513..1418591))
location: region:1416068-1418591:-1
so has part: feature:1418513-1418591:-1:exon
so has part: feature:1417150-1417695:-1:exon
so has part: feature:1416068-1416249:-1:exon

NP_001091450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1418513-1418591:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1417150-1417695:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1416068-1416249:-1:exon

LOC100855444
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100855444
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1454996..1455740)
location: region:1454996-1455740:-1
so has part: feature:1454996-1455740:-1:exon

100855444
type: Gene
SIO_000068: ncbigene

position:1454996:-1
position: 1454996
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1455740:-1
position: 1455740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1454996-1455740:-1:exon

LOC100855444
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100855444
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100855444
subclass of: SO_0000673
so part of: LOC100855444
location: complement(1454996..1455740)
location: region:1454996-1455740:-1
so has part: feature:1454996-1455740:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1454996-1455740:-1:exon

LOC111093204
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093204
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1547313..1574526
location: region:1547313-1574526:1
so has part: feature:1547313-1574526:1:exon
subclass of: SO_0000011

111093204
type: Gene
SIO_000068: ncbigene

position:1547313:1
position: 1547313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1574526:1
position: 1574526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1547313-1574526:1:exon

LOC111093204
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093204
product: uncharacterized LOC111093204, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380836.1
SIO_010081: LOC111093204
subclass of: SO_0000673
so part of: LOC111093204
location: join(1547313..1547526,1555227..1555337,1555525..1555627,1567299..1567411,1574346..1574526)
location: region:1547313-1574526:1
so has part: feature:1547313-1547526:1:exon
so has part: feature:1555227-1555337:1:exon
so has part: feature:1555525-1555627:1:exon
so has part: feature:1567299-1567411:1:exon
so has part: feature:1574346-1574526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1547313-1547526:1:exon

position:1547526:1
position: 1547526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555227-1555337:1:exon

position:1555227:1
position: 1555227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555337:1
position: 1555337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1555525-1555627:1:exon

position:1555525:1
position: 1555525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1555627:1
position: 1555627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1567299-1567411:1:exon

position:1567299:1
position: 1567299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1567411:1
position: 1567411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1574346-1574526:1:exon

position:1574346:1
position: 1574346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111093204
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093204
product: uncharacterized LOC111093204, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005380835.1
SIO_010081: LOC111093204
subclass of: SO_0000673
so part of: LOC111093204
location: join(1547313..1547490,1555227..1555337,1555525..1555627,1567299..1567411,1574346..1574526)
location: region:1547313-1574526:1
so has part: feature:1547313-1547490:1:exon
so has part: feature:1555227-1555337:1:exon
so has part: feature:1555525-1555627:1:exon
so has part: feature:1567299-1567411:1:exon
so has part: feature:1574346-1574526:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1547313-1547490:1:exon

position:1547490:1
position: 1547490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1555227-1555337:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1555525-1555627:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1567299-1567411:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1574346-1574526:1:exon

PPDPFL
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1577217..1582433
location: region:1577217-1582433:1
so has part: feature:1577217-1582433:1:exon
subclass of: SO_0000010

608588
type: Gene
SIO_000068: ncbigene

position:1577217:1
position: 1577217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1582433:1
position: 1582433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1577217-1582433:1:exon

PPDPFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_038579271.1
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1577217..1577649,1578055..1578158,1579837..1579908,1580010..1582433)
location: region:1577217-1582433:1
so has part: feature:1577217-1577649:1:exon
so has part: feature:1578055-1578158:1:exon
so has part: feature:1579837-1579908:1:exon
so has part: feature:1580010-1582433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1577217-1577649:1:exon

position:1577649:1
position: 1577649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1578055-1578158:1:exon

position:1578055:1
position: 1578055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1578158:1
position: 1578158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1579837-1579908:1:exon

position:1579837:1
position: 1579837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1579908:1
position: 1579908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1580010-1582433:1:exon

position:1580010:1
position: 1580010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PPDPFL
product: pancreatic progenitor cell differentiation and proliferation factor like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038579272.1
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1577217..1577649,1578055..1578158,1579837..1579908,1580010..1580109,1581577..1582433)
location: region:1577217-1582433:1
so has part: feature:1577217-1577649:1:exon
so has part: feature:1578055-1578158:1:exon
so has part: feature:1579837-1579908:1:exon
so has part: feature:1580010-1580109:1:exon
so has part: feature:1581577-1582433:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1577217-1577649:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1578055-1578158:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1579837-1579908:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1580010-1580109:1:exon

position:1580109:1
position: 1580109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1581577-1582433:1:exon

position:1581577:1
position: 1581577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPDPFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor-like protein isoform X2
translation: MASVPSIGCLLAKNQYYRKTSISSVSSLTDSVNVIPDDKSQQGLLNVAESSWWFKSFFHSEPVPSDIRRKDLSASGVNS
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1578104..1578158,1579837..1579908,1580010..1580109,1581577..1581589)
location: region:1578104-1581589:1
so has part: feature:1578104-1578158:1:exon
so has part: feature:1579837-1579908:1:exon
so has part: feature:1580010-1580109:1:exon
so has part: feature:1581577-1581589:1:exon

XP_038435200.1
type: Protein
SIO_000068: ncbiprotein

position:1578104:1
position: 1578104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1581589:1
position: 1581589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578104-1578158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579837-1579908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1580010-1580109:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1581577-1581589:1:exon

PPDPFL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PPDPFL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: pancreatic progenitor cell differentiation and proliferation factor-like protein isoform X1
translation: MASVPSIGCLLAKNQYYRKTSISSVSSLTDSVNVIPDDKSQQGLLNVAESSWWFKSFFHSEPVPSDIRRKDLSASGYVLVFL
SIO_010081: PPDPFL
subclass of: SO_0000673
so part of: PPDPFL
location: join(1578104..1578158,1579837..1579908,1580010..1580131)
location: region:1578104-1580131:1
so has part: feature:1578104-1578158:1:exon
so has part: feature:1579837-1579908:1:exon
so has part: feature:1580010-1580131:1:exon

XP_038435199.1
type: Protein
SIO_000068: ncbiprotein

position:1580131:1
position: 1580131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1578104-1578158:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1579837-1579908:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1580010-1580131:1:exon

LOC100855768
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100855768
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1813566..1815772)
location: region:1813566-1815772:-1
so has part: feature:1813566-1815772:-1:exon
subclass of: SO_0000010

100855768
type: Gene
SIO_000068: ncbigene

position:1813566:-1
position: 1813566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1815772:-1
position: 1815772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813566-1815772:-1:exon

LOC100855768
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC100855768
product: hyaluronan mediated motility receptor-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038579237.1
SIO_010081: LOC100855768
subclass of: SO_0000673
so part of: LOC100855768
location: complement(1813566..1815772)
location: region:1813566-1815772:-1
so has part: feature:1813566-1815772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1813566-1815772:-1:exon

LOC100855768
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC100855768
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 4 bases in 3 codons; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1813590..1813592),aa:OTHER)
product: LOW QUALITY PROTEIN: hyaluronan mediated motility receptor-like
translation: MSFPKAPLKRFNDPSGCAPSPGAYDVKTSEVLKGPVSFQKSQRFKKXKESQQNLNVDRDTTLPASARKVKTLGLKKESQKNDKDLKIPEKEIRVLVQEHGAQDKQIQDLEAELEKVEAKLNAAVREKTSLSASNASLEKQLIELTRSNELLKSKFSEDNNQKTMRILSLELMKLRNKGETKMRNMMAKQEGMEVKLQVTQKNLEESXGKIAQLEGKLVSIEKEKTDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNEVVSLKQSLEENVVLLSKQVEDLNAKCQLLEKEKEDLVNRDRVRDETLKSEMQNLKENLILEKQEHEKLRQKELQTDSLLQQEKELSSSLQQKLRSFQEEMMKERNLFEEELKQALDELDKLQQKEEQAERLVRQLEEKTKSRAAELKFLEEKLKGKEAELEESNAAHSQATLLLQESYHSIVQSLGDATAQFESYKAFMAREIEDLKLENLSLQEKVTRAEKSAEDTQHQILATENANQEYTRMLLDLQTKSALKEAEIKEITVSSLKTITDLQNQLKQKGEELKKQLEEEEARKAXKKNTVAELTEEMNKWCLLYEELYNKTKPFQLQLDAFEAEKQALLNEHGAAQEQLNKLRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRSQLAKRKQSEAKLQEELNKVLGIKHFDPSKAFLCESKENFALKTPLKEGNSNCYXAPVEFQE
SIO_010081: LOC100855768
subclass of: SO_0000673
so part of: LOC100855768
location: complement(1813566..1815728)
location: region:1813566-1815728:-1
so has part: feature:1813566-1815728:-1:exon

XP_038435165.1
type: Protein
SIO_000068: ncbiprotein

position:1815728:-1
position: 1815728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1813566-1815728:-1:exon

LOC100684688
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100684688
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1870441..1875732
location: region:1870441-1875732:1
so has part: feature:1870441-1875732:1:exon

100684688
type: Gene
SIO_000068: ncbigene

position:1870441:1
position: 1870441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1875732:1
position: 1875732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870441-1875732:1:exon

LOC100684688
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100684688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100684688
subclass of: SO_0000673
so part of: LOC100684688
location: 1870441..1870513
location: region:1870441-1870513:1
so has part: feature:1870441-1870513:1:exon

position:1870513:1
position: 1870513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1870441-1870513:1:exon

LOC100684688
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100684688
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins, and 76% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100684688
subclass of: SO_0000673
so part of: LOC100684688
location: 1874978..1875732
location: region:1874978-1875732:1
so has part: feature:1874978-1875732:1:exon

position:1874978:1
position: 1874978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1874978-1875732:1:exon

LOC119866769
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866769
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1944447..1946166)
location: region:1944447-1946166:-1
so has part: feature:1944447-1946166:-1:exon

119866769
type: Gene
SIO_000068: ncbigene

position:1944447:-1
position: 1944447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946166:-1
position: 1946166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1944447-1946166:-1:exon

LOC119866769
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866769
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119866769
subclass of: SO_0000673
so part of: LOC119866769
location: complement(1944447..1945491)
location: region:1944447-1945491:-1
so has part: feature:1944447-1945491:-1:exon

position:1945491:-1
position: 1945491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1944447-1945491:-1:exon

LOC119866769
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866769
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119866769
subclass of: SO_0000673
so part of: LOC119866769
location: complement(1945582..1946166)
location: region:1945582-1946166:-1
so has part: feature:1945582-1946166:-1:exon

position:1945582:-1
position: 1945582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1945582-1946166:-1:exon

LOC111093231
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093231
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1946604..2008459
location: region:1946604-2008459:1
so has part: feature:1946604-2008459:1:exon
subclass of: SO_0000011

111093231
type: Gene
SIO_000068: ncbigene

position:1946604:1
position: 1946604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2008459:1
position: 2008459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1946604-2008459:1:exon

LOC111093231
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093231
product: uncharacterized LOC111093231
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380837.1
SIO_010081: LOC111093231
subclass of: SO_0000673
so part of: LOC111093231
location: join(1946604..1946703,1987968..1988056,1996697..1996773,2004282..2004377,2008393..2008459)
location: region:1946604-2008459:1
so has part: feature:1946604-1946703:1:exon
so has part: feature:1987968-1988056:1:exon
so has part: feature:1996697-1996773:1:exon
so has part: feature:2004282-2004377:1:exon
so has part: feature:2008393-2008459:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1946604-1946703:1:exon

position:1946703:1
position: 1946703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1987968-1988056:1:exon

position:1987968:1
position: 1987968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1988056:1
position: 1988056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1996697-1996773:1:exon

position:1996697:1
position: 1996697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1996773:1
position: 1996773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2004282-2004377:1:exon

position:2004282:1
position: 2004282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2004377:1
position: 2004377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2008393-2008459:1:exon

position:2008393:1
position: 2008393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100684843
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100684843
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2029004..2029544
location: region:2029004-2029544:1
so has part: feature:2029004-2029544:1:exon

100684843
type: Gene
SIO_000068: ncbigene

position:2029004:1
position: 2029004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2029544:1
position: 2029544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2029004-2029544:1:exon

LOC100684843
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100684843
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC100684843
subclass of: SO_0000673
so part of: LOC100684843
location: 2029004..2029544
location: region:2029004-2029544:1
so has part: feature:2029004-2029544:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2029004-2029544:1:exon

LOC119877710
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119877710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2050993..2122598
location: region:2050993-2122598:1
so has part: feature:2050993-2122598:1:exon
subclass of: SO_0000011

119877710
type: Gene
SIO_000068: ncbigene

position:2050993:1
position: 2050993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2122598:1
position: 2122598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2050993-2122598:1:exon

LOC119877710
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119877710
product: uncharacterized LOC119877710
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380838.1
SIO_010081: LOC119877710
subclass of: SO_0000673
so part of: LOC119877710
location: join(2050993..2051155,2059431..2059506,2122218..2122598)
location: region:2050993-2122598:1
so has part: feature:2050993-2051155:1:exon
so has part: feature:2059431-2059506:1:exon
so has part: feature:2122218-2122598:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2050993-2051155:1:exon

position:2051155:1
position: 2051155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2059431-2059506:1:exon

position:2059431:1
position: 2059431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2059506:1
position: 2059506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2122218-2122598:1:exon

position:2122218:1
position: 2122218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNTG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2298045..3111263
location: region:2298045-3111263:1
so has part: feature:2298045-3111263:1:exon
subclass of: SO_0000010

486943
type: Gene
SIO_000068: ncbigene

position:2298045:1
position: 2298045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3111263:1
position: 3111263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298045-3111263:1:exon

SNTG1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: SNTG1
product: syntrophin gamma 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XR_005380942.1
SIO_010081: SNTG1
so part of: SNTG1
location: join(2298045..2298314,2298720..2299504,2576510..2576584,2820352..2820402,2829027..2829161,2868082..2868138,2879073..2879130,2879917..2879960,2880054..2880095,2916218..2916320,2921206..2921288,2925872..2926002,2939889..2940018,2962024..2962062,2979983..2980021,3020191..3020307,3021418..3021489,3051153..3051305,3055744..3055836,3060646..3060709,3075749..3075859,3109950..3109964)
location: region:2298045-3109964:1
so has part: feature:2298045-2298314:1:exon
so has part: feature:2298720-2299504:1:exon
so has part: feature:2576510-2576584:1:exon
so has part: feature:2820352-2820402:1:exon
so has part: feature:2829027-2829161:1:exon
so has part: feature:2868082-2868138:1:exon
so has part: feature:2879073-2879130:1:exon
so has part: feature:2879917-2879960:1:exon
so has part: feature:2880054-2880095:1:exon
so has part: feature:2916218-2916320:1:exon
so has part: feature:2921206-2921288:1:exon
so has part: feature:2925872-2926002:1:exon
so has part: feature:2939889-2940018:1:exon
so has part: feature:2962024-2962062:1:exon
so has part: feature:2979983-2980021:1:exon
so has part: feature:3020191-3020307:1:exon
so has part: feature:3021418-3021489:1:exon
so has part: feature:3051153-3051305:1:exon
so has part: feature:3055744-3055836:1:exon
so has part: feature:3060646-3060709:1:exon
so has part: feature:3075749-3075859:1:exon
so has part: feature:3109950-3109964:1:exon

position:3109964:1
position: 3109964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298045-2298314:1:exon

position:2298314:1
position: 2298314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2298720-2299504:1:exon

position:2298720:1
position: 2298720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2299504:1
position: 2299504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2576510-2576584:1:exon

position:2576510:1
position: 2576510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2576584:1
position: 2576584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2820352-2820402:1:exon

position:2820352:1
position: 2820352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2820402:1
position: 2820402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2829027-2829161:1:exon

position:2829027:1
position: 2829027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829161:1
position: 2829161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2868082-2868138:1:exon

position:2868082:1
position: 2868082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2868138:1
position: 2868138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2879073-2879130:1:exon

position:2879073:1
position: 2879073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2879130:1
position: 2879130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2879917-2879960:1:exon

position:2879917:1
position: 2879917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2879960:1
position: 2879960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2880054-2880095:1:exon

position:2880054:1
position: 2880054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2880095:1
position: 2880095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2916218-2916320:1:exon

position:2916218:1
position: 2916218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2916320:1
position: 2916320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2921206-2921288:1:exon

position:2921206:1
position: 2921206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2921288:1
position: 2921288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2925872-2926002:1:exon

position:2925872:1
position: 2925872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2926002:1
position: 2926002
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2939889-2940018:1:exon

position:2939889:1
position: 2939889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2940018:1
position: 2940018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2962024-2962062:1:exon

position:2962024:1
position: 2962024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2962062:1
position: 2962062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2979983-2980021:1:exon

position:2979983:1
position: 2979983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2980021:1
position: 2980021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3020191-3020307:1:exon

position:3020191:1
position: 3020191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3020307:1
position: 3020307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3021418-3021489:1:exon

position:3021418:1
position: 3021418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3021489:1
position: 3021489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3051153-3051305:1:exon

position:3051153:1
position: 3051153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3051305:1
position: 3051305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3055744-3055836:1:exon

position:3055744:1
position: 3055744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3055836:1
position: 3055836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3060646-3060709:1:exon

position:3060646:1
position: 3060646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3060709:1
position: 3060709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:3075749-3075859:1:exon

position:3075749:1
position: 3075749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3075859:1
position: 3075859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:3109950-3109964:1:exon

position:3109950:1
position: 3109950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SNTG1
product: syntrophin gamma 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038579273.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2298047..2298314,2298720..2299504,2576510..2576584,2820352..2820402,2829027..2829161,2868082..2868138,2879073..2879130,2879917..2879960,2880054..2880095,2916218..2916320,2921206..2921288,2925872..2926002,2939889..2940018,2962024..2962062,2979983..2980021,3020191..3020307,3021418..3021489,3051153..3051305,3055744..3055836,3075749..3075859,3109950..3111263)
location: region:2298047-3111263:1
so has part: feature:2298047-2298314:1:exon
so has part: feature:2298720-2299504:1:exon
so has part: feature:2576510-2576584:1:exon
so has part: feature:2820352-2820402:1:exon
so has part: feature:2829027-2829161:1:exon
so has part: feature:2868082-2868138:1:exon
so has part: feature:2879073-2879130:1:exon
so has part: feature:2879917-2879960:1:exon
so has part: feature:2880054-2880095:1:exon
so has part: feature:2916218-2916320:1:exon
so has part: feature:2921206-2921288:1:exon
so has part: feature:2925872-2926002:1:exon
so has part: feature:2939889-2940018:1:exon
so has part: feature:2962024-2962062:1:exon
so has part: feature:2979983-2980021:1:exon
so has part: feature:3020191-3020307:1:exon
so has part: feature:3021418-3021489:1:exon
so has part: feature:3051153-3051305:1:exon
so has part: feature:3055744-3055836:1:exon
so has part: feature:3075749-3075859:1:exon
so has part: feature:3109950-3111263:1:exon

position:2298047:1
position: 2298047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298047-2298314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2298720-2299504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2576510-2576584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2820352-2820402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2829027-2829161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2868082-2868138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2879073-2879130:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2879917-2879960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2880054-2880095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2916218-2916320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921206-2921288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2925872-2926002:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2939889-2940018:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2962024-2962062:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2979983-2980021:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3020191-3020307:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3021418-3021489:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3051153-3051305:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3055744-3055836:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3075749-3075859:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3109950-3111263:1:exon

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SNTG1
product: syntrophin gamma 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038579274.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2298047..2298314,2298720..2299504,2820352..2820402,2829027..2829161,2868082..2868138,2879073..2879130,2879917..2879960,2880054..2880095,2916218..2916320,2921206..2921288,2925872..2926002,2939889..2940018,2962024..2962062,2979983..2980021,3020191..3020307,3021418..3021489,3051153..3051305,3055744..3055836,3075749..3075859,3109950..3111263)
location: region:2298047-3111263:1
so has part: feature:2298047-2298314:1:exon
so has part: feature:2298720-2299504:1:exon
so has part: feature:2820352-2820402:1:exon
so has part: feature:2829027-2829161:1:exon
so has part: feature:2868082-2868138:1:exon
so has part: feature:2879073-2879130:1:exon
so has part: feature:2879917-2879960:1:exon
so has part: feature:2880054-2880095:1:exon
so has part: feature:2916218-2916320:1:exon
so has part: feature:2921206-2921288:1:exon
so has part: feature:2925872-2926002:1:exon
so has part: feature:2939889-2940018:1:exon
so has part: feature:2962024-2962062:1:exon
so has part: feature:2979983-2980021:1:exon
so has part: feature:3020191-3020307:1:exon
so has part: feature:3021418-3021489:1:exon
so has part: feature:3051153-3051305:1:exon
so has part: feature:3055744-3055836:1:exon
so has part: feature:3075749-3075859:1:exon
so has part: feature:3109950-3111263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2298047-2298314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2298720-2299504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2820352-2820402:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2829027-2829161:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2868082-2868138:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2879073-2879130:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2879917-2879960:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2880054-2880095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2916218-2916320:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2921206-2921288:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2925872-2926002:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2939889-2940018:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2962024-2962062:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2979983-2980021:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3020191-3020307:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3021418-3021489:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3051153-3051305:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3055744-3055836:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3075749-3075859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3109950-3111263:1:exon

SNTG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SNTG1
product: syntrophin gamma 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038579275.1
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2298050..2298314,2298720..2299504,2576510..2576584,2820352..2820402,2829027..2829161,2868082..2868138,2879073..2879130,2879917..2879960,2880054..2880095,2916218..2916320,2921206..2921288,2925872..2926002,2939889..2940018,2962024..2962062,3020191..3020307,3021418..3021489,3051153..3051305,3055744..3055836,3075749..3075859,3109950..3111263)
location: region:2298050-3111263:1
so has part: feature:2298050-2298314:1:exon
so has part: feature:2298720-2299504:1:exon
so has part: feature:2576510-2576584:1:exon
so has part: feature:2820352-2820402:1:exon
so has part: feature:2829027-2829161:1:exon
so has part: feature:2868082-2868138:1:exon
so has part: feature:2879073-2879130:1:exon
so has part: feature:2879917-2879960:1:exon
so has part: feature:2880054-2880095:1:exon
so has part: feature:2916218-2916320:1:exon
so has part: feature:2921206-2921288:1:exon
so has part: feature:2925872-2926002:1:exon
so has part: feature:2939889-2940018:1:exon
so has part: feature:2962024-2962062:1:exon
so has part: feature:3020191-3020307:1:exon
so has part: feature:3021418-3021489:1:exon
so has part: feature:3051153-3051305:1:exon
so has part: feature:3055744-3055836:1:exon
so has part: feature:3075749-3075859:1:exon
so has part: feature:3109950-3111263:1:exon

position:2298050:1
position: 2298050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2298050-2298314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2298720-2299504:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2576510-2576584:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2820352-2820402:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2829027-2829161:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2868082-2868138:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2879073-2879130:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2879917-2879960:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2880054-2880095:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2916218-2916320:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2921206-2921288:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2925872-2926002:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2939889-2940018:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2962024-2962062:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3020191-3020307:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3021418-3021489:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3051153-3051305:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3055744-3055836:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3075749-3075859:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3109950-3111263:1:exon

LOC100685366
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100685366
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2465895..2466338)
location: region:2465895-2466338:-1
so has part: feature:2465895-2466338:-1:exon

100685366
type: Gene
SIO_000068: ncbigene

position:2465895:-1
position: 2465895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2466338:-1
position: 2466338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465895-2466338:-1:exon

LOC100685366
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100685366
subclass of: SO_0000673
so part of: LOC100685366
location: complement(2465895..2466041)
location: region:2465895-2466041:-1
so has part: feature:2465895-2466041:-1:exon

position:2466041:-1
position: 2466041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2465895-2466041:-1:exon

LOC100685366
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685366
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 41% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100685366
subclass of: SO_0000673
so part of: LOC100685366
location: complement(2466169..2466338)
location: region:2466169-2466338:-1
so has part: feature:2466169-2466338:-1:exon

position:2466169:-1
position: 2466169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2466169-2466338:-1:exon

LOC119866783
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866783
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(2472628..2472754)
location: region:2472628-2472754:-1
so has part: feature:2472628-2472754:-1:exon

119866783
type: Gene
SIO_000068: ncbigene

position:2472628:-1
position: 2472628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2472754:-1
position: 2472754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2472628-2472754:-1:exon

LOC119866783
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866783
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119866783
subclass of: SO_0000673
so part of: LOC119866783
location: complement(2472628..2472754)
location: region:2472628-2472754:-1
so has part: feature:2472628-2472754:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2472628-2472754:-1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X1
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQVSSDFLFLQDPMLIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2820376..2820402,2829027..2829161,2868082..2868138,2879073..2879130,2879917..2879960,2880054..2880095,2916218..2916320,2921206..2921288,2925872..2926002,2939889..2940018,2962024..2962062,2979983..2980021,3020191..3020307,3021418..3021489,3051153..3051305,3055744..3055836,3075749..3075859,3109950..3110108)
location: region:2820376-3110108:1
so has part: feature:2820376-2820402:1:exon
so has part: feature:2829027-2829161:1:exon
so has part: feature:2868082-2868138:1:exon
so has part: feature:2879073-2879130:1:exon
so has part: feature:2879917-2879960:1:exon
so has part: feature:2880054-2880095:1:exon
so has part: feature:2916218-2916320:1:exon
so has part: feature:2921206-2921288:1:exon
so has part: feature:2925872-2926002:1:exon
so has part: feature:2939889-2940018:1:exon
so has part: feature:2962024-2962062:1:exon
so has part: feature:2979983-2980021:1:exon
so has part: feature:3020191-3020307:1:exon
so has part: feature:3021418-3021489:1:exon
so has part: feature:3051153-3051305:1:exon
so has part: feature:3055744-3055836:1:exon
so has part: feature:3075749-3075859:1:exon
so has part: feature:3109950-3110108:1:exon

XP_038435201.1
type: Protein
SIO_000068: ncbiprotein

position:2820376:1
position: 2820376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3110108:1
position: 3110108
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2820376-2820402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829027-2829161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2868082-2868138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2879073-2879130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2879917-2879960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2880054-2880095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2916218-2916320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921206-2921288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2925872-2926002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2939889-2940018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2962024-2962062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979983-2980021:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3020191-3020307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3021418-3021489:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3051153-3051305:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3055744-3055836:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3075749-3075859:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3109950-3110108:1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X1
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQVSSDFLFLQDPMLIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2820376..2820402,2829027..2829161,2868082..2868138,2879073..2879130,2879917..2879960,2880054..2880095,2916218..2916320,2921206..2921288,2925872..2926002,2939889..2940018,2962024..2962062,2979983..2980021,3020191..3020307,3021418..3021489,3051153..3051305,3055744..3055836,3075749..3075859,3109950..3110108)
location: region:2820376-3110108:1
so has part: feature:2820376-2820402:1:exon
so has part: feature:2829027-2829161:1:exon
so has part: feature:2868082-2868138:1:exon
so has part: feature:2879073-2879130:1:exon
so has part: feature:2879917-2879960:1:exon
so has part: feature:2880054-2880095:1:exon
so has part: feature:2916218-2916320:1:exon
so has part: feature:2921206-2921288:1:exon
so has part: feature:2925872-2926002:1:exon
so has part: feature:2939889-2940018:1:exon
so has part: feature:2962024-2962062:1:exon
so has part: feature:2979983-2980021:1:exon
so has part: feature:3020191-3020307:1:exon
so has part: feature:3021418-3021489:1:exon
so has part: feature:3051153-3051305:1:exon
so has part: feature:3055744-3055836:1:exon
so has part: feature:3075749-3075859:1:exon
so has part: feature:3109950-3110108:1:exon

XP_038435202.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2820376-2820402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829027-2829161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2868082-2868138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2879073-2879130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2879917-2879960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2880054-2880095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2916218-2916320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921206-2921288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2925872-2926002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2939889-2940018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2962024-2962062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2979983-2980021:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3020191-3020307:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3021418-3021489:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3051153-3051305:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3055744-3055836:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3075749-3075859:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3109950-3110108:1:exon

SNTG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SNTG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-1-syntrophin isoform X2
translation: MDFRTACEETKTGICLLQDGNQEPFKVRLHLAKDILMIQEQDVICVSGEPFYSGERTVTIRRQTVGGFGLSIKGGAEHNIPVVISKISKEQRAELSGLLFIGDAILQINGINVRKCRHEEVVQVLRNAGEEVTLTVSFLKRAPAFLKLPLNEDCACAPSDQSSGTSSPLCDSGLHLNYHPNNTDTLSCSSWPTSPGLRWEKRWCDLRLIPLLHSRFSQYVPGTDLSRQNAFQVIAVDGVCSGIIQCLSAEDCIDWLQAIATNISNLTKHNIKKINRNFPVNQQIVYMGWCEAREQDPLQDRAYSPTFLALRGSCLYKFLAPPVTTWDWTRAEKTFSVYEIMCKILKDSDLLDRRKHCFTVQSESGEDLYFSVELDSDLAQWERAFQTATFLEVERIQCKTYACVLESHLMGLTIDFSTGFICFDAATKAILWRYKFSQLKGSSDDGKSKIKFLFQNPDTKQIEAKELEFSNLFAVLHCIHSFFAAKVACLDPLYLGNQTAASTAASSSTTSRAKYTT
SIO_010081: SNTG1
subclass of: SO_0000673
so part of: SNTG1
location: join(2820376..2820402,2829027..2829161,2868082..2868138,2879073..2879130,2879917..2879960,2880054..2880095,2916218..2916320,2921206..2921288,2925872..2926002,2939889..2940018,2962024..2962062,3020191..3020307,3021418..3021489,3051153..3051305,3055744..3055836,3075749..3075859,3109950..3110108)
location: region:2820376-3110108:1
so has part: feature:2820376-2820402:1:exon
so has part: feature:2829027-2829161:1:exon
so has part: feature:2868082-2868138:1:exon
so has part: feature:2879073-2879130:1:exon
so has part: feature:2879917-2879960:1:exon
so has part: feature:2880054-2880095:1:exon
so has part: feature:2916218-2916320:1:exon
so has part: feature:2921206-2921288:1:exon
so has part: feature:2925872-2926002:1:exon
so has part: feature:2939889-2940018:1:exon
so has part: feature:2962024-2962062:1:exon
so has part: feature:3020191-3020307:1:exon
so has part: feature:3021418-3021489:1:exon
so has part: feature:3051153-3051305:1:exon
so has part: feature:3055744-3055836:1:exon
so has part: feature:3075749-3075859:1:exon
so has part: feature:3109950-3110108:1:exon

XP_038435203.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2820376-2820402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2829027-2829161:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2868082-2868138:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2879073-2879130:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2879917-2879960:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2880054-2880095:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2916218-2916320:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2921206-2921288:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2925872-2926002:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2939889-2940018:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2962024-2962062:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3020191-3020307:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3021418-3021489:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3051153-3051305:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3055744-3055836:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3075749-3075859:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3109950-3110108:1:exon

LOC119866807
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866807
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3335767..3335868
location: region:3335767-3335868:1
so has part: feature:3335767-3335868:1:exon
subclass of: SO_0000623

119866807
type: Gene
SIO_000068: ncbigene

position:3335767:1
position: 3335767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3335868:1
position: 3335868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3335767-3335868:1:exon

LOC119866807
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: snRNA
gene: LOC119866807
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005381317.1
SIO_010081: LOC119866807
subclass of: SO_0000673
so part of: LOC119866807
location: 3335767..3335868
location: region:3335767-3335868:1
so has part: feature:3335767-3335868:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3335767-3335868:1:exon

PXDNL
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3573666..4005696)
location: region:3573666-4005696:-1
so has part: feature:3573666-4005696:-1:exon
subclass of: SO_0000010

486944
type: Gene
SIO_000068: ncbigene

position:3573666:-1
position: 3573666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4005696:-1
position: 4005696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3573666-4005696:-1:exon

PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038579277.1
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3573666..3575727,3576458..3576571,3585467..3585596,3589177..3589291,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3856641..3856712,4005528..4005696))
location: region:3573666-4005696:-1
so has part: feature:4005528-4005696:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585467-3585596:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3573666-3575727:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005696:-1:exon

position:4005528:-1
position: 4005528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

position:3856641:-1
position: 3856641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3856712:-1
position: 3856712
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3772191-3772262:-1:exon

position:3772191:-1
position: 3772191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3772262:-1
position: 3772262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3711210-3711281:-1:exon

position:3711210:-1
position: 3711210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3711281:-1
position: 3711281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3706462-3706533:-1:exon

position:3706462:-1
position: 3706462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3706533:-1
position: 3706533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3700324-3700493:-1:exon

position:3700324:-1
position: 3700324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3700493:-1
position: 3700493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3697644-3697761:-1:exon

position:3697644:-1
position: 3697644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3697761:-1
position: 3697761
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3690391-3690560:-1:exon

position:3690391:-1
position: 3690391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3690560:-1
position: 3690560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3686292-3686558:-1:exon

position:3686292:-1
position: 3686292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3686558:-1
position: 3686558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3682271-3682387:-1:exon

position:3682271:-1
position: 3682271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3682387:-1
position: 3682387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3679775-3679933:-1:exon

position:3679775:-1
position: 3679775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3679933:-1
position: 3679933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3661627-3661739:-1:exon

position:3661627:-1
position: 3661627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3661739:-1
position: 3661739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3658895-3659051:-1:exon

position:3658895:-1
position: 3658895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3659051:-1
position: 3659051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3649680-3649788:-1:exon

position:3649680:-1
position: 3649680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3649788:-1
position: 3649788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3647792-3647949:-1:exon

position:3647792:-1
position: 3647792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3647949:-1
position: 3647949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3644306-3645815:-1:exon

position:3644306:-1
position: 3644306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3645815:-1
position: 3645815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3607754-3607888:-1:exon

position:3607754:-1
position: 3607754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3607888:-1
position: 3607888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038579279.1
SIO_010081: PXDNL
subclass of: SO_0000673
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038579278.1
SIO_010081: PXDNL
subclass of: SO_0000673
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location: region:3573666-4005696:-1
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038579276.1
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
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location: region:3573666-4005696:-1
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X23
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038579280.1
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
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location: region:3573666-3911084:-1
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PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X26
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038579281.1
SIO_010081: PXDNL
subclass of: SO_0000673
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urn:…
SIO_000300: 12
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3585467-3585596:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3573666-3575727:-1:exon

PXDNL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X24
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380944.1
SIO_010081: PXDNL
so part of: PXDNL
location: complement(join(3575591..3575727,3576458..3576571,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3799858..3799929,3856641..3856712,4005528..4005696))
location: region:3575591-4005696:-1
so has part: feature:4005528-4005696:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3799858-3799929:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3575591-3575727:-1:exon

position:3575591:-1
position: 3575591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799858-3799929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3575591-3575727:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein isoform X16
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLQMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKGTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3575596..3575727,3576458..3576571,3585467..3585596,3589177..3589291,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3856641..3856712,4005528..4005691))
location: region:3575596-4005691:-1
so has part: feature:4005528-4005691:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585467-3585596:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3575596-3575727:-1:exon

XP_038435205.1
type: Protein
SIO_000068: ncbiprotein

position:3575596:-1
position: 3575596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4005691:-1
position: 4005691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3585467-3585596:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3575596-3575727:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein isoform X18
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLQMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKGTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3575596..3575727,3576458..3576571,3585467..3585596,3589177..3589291,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3706462..3706533,3711210..3711281,3772191..3772262,3799858..3799929,3856641..3856712,4005528..4005691))
location: region:3575596-4005691:-1
so has part: feature:4005528-4005691:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3799858-3799929:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585467-3585596:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3575596-3575727:-1:exon

XP_038435207.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799858-3799929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3585467-3585596:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3575596-3575727:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein isoform X17
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLQMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKGTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3575596..3575727,3576458..3576571,3585467..3585596,3589177..3589291,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690472..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3799858..3799929,3856641..3856712,4005528..4005691))
location: region:3575596-4005691:-1
so has part: feature:4005528-4005691:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3799858-3799929:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690472-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585467-3585596:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3575596-3575727:-1:exon

XP_038435206.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799858-3799929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690472-3690560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3585467-3585596:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3575596-3575727:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein isoform X1
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLQMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKGTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3575596..3575727,3576458..3576571,3585467..3585596,3589177..3589291,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3799858..3799929,3856641..3856712,4005528..4005691))
location: region:3575596-4005691:-1
so has part: feature:4005528-4005691:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3799858-3799929:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585467-3585596:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3575596-3575727:-1:exon

XP_038435204.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799858-3799929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:3585467-3585596:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:3575596-3575727:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein isoform X19
translation: MLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLQMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKGTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3575596..3575727,3576458..3576571,3585467..3585596,3589177..3589291,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711256))
location: region:3575596-3711256:-1
so has part: feature:3711210-3711256:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585467-3585596:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3575596-3575727:-1:exon

XP_038435208.1
type: Protein
SIO_000068: ncbiprotein

position:3711256:-1
position: 3711256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3711210-3711256:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3585467-3585596:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3575596-3575727:-1:exon

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein isoform X20
translation: MRVSPKAPRTLHRFVNSRRIQLCHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKKLYGNPGNIDFWPALMVEDLIPGTRVGPTLMCLFVTQFQRLRDGDRFWYENPGVFTPAQLTQLRQASLGRVLCDNGDNIQQVQADVFVKAKYPQDYLSCDEIPQVDLQMWQDCCEDCRSRGQFRTFTQESRKKRSAQYSYPDEKDKELSDLISRQQDHLYIDEDSKNMTVLAKTKFAQDFSSFAVEIQKTIKALREQINKLEARLRQAGCTDDKGIRRKDNEHWMKEDCISCMCKSGQVTCVVKTCPPAPCPSLELVKGTCCPVCRDRGMPADSSEKH
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3575596..3575727,3576458..3576571,3585467..3585596,3589177..3589291,3605372..3605580,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3700324..3700391))
location: region:3575596-3700391:-1
so has part: feature:3700324-3700391:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3605372-3605580:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585467-3585596:-1:exon
so has part: feature:3576458-3576571:-1:exon
so has part: feature:3575596-3575727:-1:exon

XP_038435209.1
type: Protein
SIO_000068: ncbiprotein

position:3700391:-1
position: 3700391
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3700324-3700391:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3605372-3605580:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3585467-3585596:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3576458-3576571:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3575596-3575727:-1:exon

PXDNL
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X25
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XR_005380945.1
SIO_010081: PXDNL
so part of: PXDNL
location: complement(join(3585563..3585596,3589177..3589291,3607754..3607888,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3799858..3799929,3856641..3856712,4005528..4005696))
location: region:3585563-4005696:-1
so has part: feature:4005528-4005696:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3799858-3799929:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3607754-3607888:-1:exon
so has part: feature:3589177-3589291:-1:exon
so has part: feature:3585563-3585596:-1:exon

position:3585563:-1
position: 3585563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799858-3799929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3607754-3607888:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3589177-3589291:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3585563-3585596:-1:exon

PXDNL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PXDNL
product: peroxidasin like, transcript variant X27
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038579282.1
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3642972..3643103,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3799858..3799929,3856641..3856712,4005528..4005696))
location: region:3642972-4005696:-1
so has part: feature:4005528-4005696:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3799858-3799929:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3642972-3643103:-1:exon

position:3642972:-1
position: 3642972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005696:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799858-3799929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3642972-3643103:-1:exon

position:3643103:-1
position: 3643103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PXDNL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PXDNL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: peroxidasin-like protein isoform X21
translation: MACRLVRWAACLVLAGRCLPGRPCPSRCLCLASTVRCVHWMLDRVPRAPPRTAVLDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEPQDVEVTSGNTVYFTCRAEGNPKPEIIWIHNNHSLDLEDDHRLNLFDDGTLMIRNTRESDQGEYQCMARNSAGEVKTQNAMLRYSSPPAKPSFIIQPQDTEVLIGTSTTLECMATGHPHPRVTWTRGNGEALDGSRHLATSGGLYLKNVTLQDHGQFICHANNNQGTVQATANIIVQAPPQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGLHTVLSSGTLRIDQVARHDQGQYECQAVSPLGVRKASVQLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGVQITESGKFHVSGEGMLTIYDAGQADQGRYECVAQNSFGLVVANMFLTVVAIQGRQAGDDFVESSILDAVQRVDSAINSTRRHLFSQKPRTPSDLLAQFRYPHDPFTVEMARAGEIFEHTLLLIQEHVKQGLTVDLEGREFRYNDLVSPRYLGLIANLSGCTAHRPVPNCSDMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLPPPRLVSTELAAAAAVTPDDRYTHMLMQWGQFLDHDLGHAVPALSTSRFSDGRPCSAACTDDPPCFPIVIPGADPRGTRAPCMFFARSSPVCGSGVTSLVMNSVYAREQINQLTAYIDASNVYGSSDRESLVLRDFSEPRGLLRTGLPWAPSGKPLLPFSAGPPPECTRPEQGSRSRSRCFLAGDRRANEQLALTAMHTLWFREHNRVAAALSALNPHWDGDTLYHEARKIVGAQLQHITYSHWLPKILGEPGMRMLRDYQGYDPSVNAGIINSFATAAFRFGHTLINPILYRLNDTFGEIPEGHLPLHEAFFSPSRIIEEGGIDPLLRGLFGVAAKLRVPSQLLSLELTEKLFSTAHSVALDLAATNIQRGRDHGLPPYADFRVFCNLTSVENFEDLRNEIKDSEIRRKLKNPVLGTETQDEGNSVL
SIO_010081: PXDNL
subclass of: SO_0000673
so part of: PXDNL
location: complement(join(3643055..3643103,3644306..3645815,3647792..3647949,3649680..3649788,3658895..3659051,3661627..3661739,3679775..3679933,3682271..3682387,3686292..3686558,3690391..3690560,3697644..3697761,3700324..3700493,3706462..3706533,3711210..3711281,3772191..3772262,3799858..3799929,3856641..3856712,4005528..4005691))
location: region:3643055-4005691:-1
so has part: feature:4005528-4005691:-1:exon
so has part: feature:3856641-3856712:-1:exon
so has part: feature:3799858-3799929:-1:exon
so has part: feature:3772191-3772262:-1:exon
so has part: feature:3711210-3711281:-1:exon
so has part: feature:3706462-3706533:-1:exon
so has part: feature:3700324-3700493:-1:exon
so has part: feature:3697644-3697761:-1:exon
so has part: feature:3690391-3690560:-1:exon
so has part: feature:3686292-3686558:-1:exon
so has part: feature:3682271-3682387:-1:exon
so has part: feature:3679775-3679933:-1:exon
so has part: feature:3661627-3661739:-1:exon
so has part: feature:3658895-3659051:-1:exon
so has part: feature:3649680-3649788:-1:exon
so has part: feature:3647792-3647949:-1:exon
so has part: feature:3644306-3645815:-1:exon
so has part: feature:3643055-3643103:-1:exon

XP_038435210.1
type: Protein
SIO_000068: ncbiprotein

position:3643055:-1
position: 3643055
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4005528-4005691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3856641-3856712:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799858-3799929:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3772191-3772262:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3711210-3711281:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3706462-3706533:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3700324-3700493:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3697644-3697761:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3690391-3690560:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3686292-3686558:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3682271-3682387:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3679775-3679933:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3661627-3661739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3658895-3659051:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3649680-3649788:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3647792-3647949:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3644306-3645815:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3643055-3643103:-1:exon

LOC119866693
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866693
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3817481..3820921
location: region:3817481-3820921:1
so has part: feature:3817481-3820921:1:exon

119866693
type: Gene
SIO_000068: ncbigene

position:3817481:1
position: 3817481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3820921:1
position: 3820921
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817481-3820921:1:exon

LOC119866693
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866693
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
pseudo: true
SIO_010081: LOC119866693
subclass of: SO_0000673
so part of: LOC119866693
location: 3817481..3817782
location: region:3817481-3817782:1
so has part: feature:3817481-3817782:1:exon

position:3817782:1
position: 3817782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3817481-3817782:1:exon

LOC119866693
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866693
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins
pseudo: true
SIO_010081: LOC119866693
subclass of: SO_0000673
so part of: LOC119866693
location: 3820544..3820921
location: region:3820544-3820921:1
so has part: feature:3820544-3820921:1:exon

position:3820544:1
position: 3820544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3820544-3820921:1:exon

LOC100685519
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100685519
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3849229..3850435)
location: region:3849229-3850435:-1
so has part: feature:3849229-3850435:-1:exon

100685519
type: Gene
SIO_000068: ncbigene

position:3849229:-1
position: 3849229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3850435:-1
position: 3850435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3849229-3850435:-1:exon

LOC100685519
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685519
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 63% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100685519
subclass of: SO_0000673
so part of: LOC100685519
location: complement(3849229..3850435)
location: region:3849229-3850435:-1
so has part: feature:3849229-3850435:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3849229-3850435:-1:exon

PCMTD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4009932..4078216)
location: region:4009932-4078216:-1
so has part: feature:4009932-4078216:-1:exon
subclass of: SO_0000010

477874
type: Gene
SIO_000068: ncbigene

position:4009932:-1
position: 4009932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4078216:-1
position: 4078216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4009932-4078216:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038579287.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4009932..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4078005..4078216))
location: region:4009932-4078216:-1
so has part: feature:4078005-4078216:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4009932-4013073:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4078005-4078216:-1:exon

position:4078005:-1
position: 4078005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4034526-4034628:-1:exon

position:4034526:-1
position: 4034526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4034628:-1
position: 4034628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4022909-4023080:-1:exon

position:4022909:-1
position: 4022909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4023080:-1
position: 4023080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4021178-4021301:-1:exon

position:4021178:-1
position: 4021178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4021301:-1
position: 4021301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4009932-4013073:-1:exon

position:4013073:-1
position: 4013073
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579283.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4009932..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048691,4078005..4078114))
location: region:4009932-4078114:-1
so has part: feature:4078005-4078114:-1:exon
so has part: feature:4048261-4048691:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4009932-4013073:-1:exon

position:4078114:-1
position: 4078114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4078005-4078114:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4048261-4048691:-1:exon

position:4048261:-1
position: 4048261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4048691:-1
position: 4048691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4009932-4013073:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038579288.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4009932..4013073,4021178..4021301,4022909..4023080,4028516..4028707,4034526..4034634))
location: region:4009932-4034634:-1
so has part: feature:4034526-4034634:-1:exon
so has part: feature:4028516-4028707:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4009932-4013073:-1:exon

position:4034634:-1
position: 4034634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4034526-4034634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4028516-4028707:-1:exon

position:4028516:-1
position: 4028516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4028707:-1
position: 4028707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4009932-4013073:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 11 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038579285.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048691,4077170..4077501))
location: region:4012709-4077501:-1
so has part: feature:4077170-4077501:-1:exon
so has part: feature:4048261-4048691:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

position:4012709:-1
position: 4012709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4077501:-1
position: 4077501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4077170-4077501:-1:exon

position:4077170:-1
position: 4077170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4048261-4048691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_038579284.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048691,4070280..4070389,4071103..4071183))
location: region:4012709-4071183:-1
so has part: feature:4071103-4071183:-1:exon
so has part: feature:4070280-4070389:-1:exon
so has part: feature:4048261-4048691:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

position:4071183:-1
position: 4071183
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4071103-4071183:-1:exon

position:4071103:-1
position: 4071103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4070280-4070389:-1:exon

position:4070280:-1
position: 4070280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4070389:-1
position: 4070389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4048261-4048691:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: PCMTD1
product: protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_038579286.1
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048691,4059652..4059821))
location: region:4012709-4059821:-1
so has part: feature:4059652-4059821:-1:exon
so has part: feature:4048261-4048691:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

position:4059821:-1
position: 4059821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4059652-4059821:-1:exon

position:4059652:-1
position: 4059652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4048261-4048691:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048567))
location: region:4012709-4048567:-1
so has part: feature:4048261-4048567:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

XP_038435211.1
type: Protein
SIO_000068: ncbiprotein

position:4048567:-1
position: 4048567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4048261-4048567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048567))
location: region:4012709-4048567:-1
so has part: feature:4048261-4048567:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

XP_038435212.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4048261-4048567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048567))
location: region:4012709-4048567:-1
so has part: feature:4048261-4048567:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

XP_038435213.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4048261-4048567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X1
translation: MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGNIHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEYAKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4023080,4034526..4034628,4048261..4048567))
location: region:4012709-4048567:-1
so has part: feature:4048261-4048567:-1:exon
so has part: feature:4034526-4034628:-1:exon
so has part: feature:4022909-4023080:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

XP_038435214.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4048261-4048567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4034526-4034628:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4022909-4023080:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X2
translation: MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4022962))
location: region:4012709-4022962:-1
so has part: feature:4022909-4022962:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

XP_038435215.1
type: Protein
SIO_000068: ncbiprotein

position:4022962:-1
position: 4022962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4022909-4022962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4012709-4013073:-1:exon

PCMTD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: PCMTD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein-L-isoaspartate O-methyltransferase domain-containing protein 1 isoform X2
translation: MKILLKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAVRNLQDLARIYIRRTLRNFINDEMQAKGIPQRAPPKRKRKRVKQRINTYVFVGNQLIPQPLDSEEDEKMEEDKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYFREK
SIO_010081: PCMTD1
subclass of: SO_0000673
so part of: PCMTD1
location: complement(join(4012709..4013073,4021178..4021301,4022909..4022962))
location: region:4012709-4022962:-1
so has part: feature:4022909-4022962:-1:exon
so has part: feature:4021178-4021301:-1:exon
so has part: feature:4012709-4013073:-1:exon

XP_038435216.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4022909-4022962:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4021178-4021301:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4012709-4013073:-1:exon

ST18
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4270696..4416286)
location: region:4270696-4416286:-1
so has part: feature:4270696-4416286:-1:exon
subclass of: SO_0000010

486947
type: Gene
SIO_000068: ncbigene

position:4270696:-1
position: 4270696
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4416286:-1
position: 4416286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4270696-4416286:-1:exon

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X19
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038579292.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4270696..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882,4394364..4394409,4416097..4416286))
location: region:4270696-4416286:-1
so has part: feature:4416097-4416286:-1:exon
so has part: feature:4394364-4394409:-1:exon
so has part: feature:4378828-4378882:-1:exon
so has part: feature:4376692-4376722:-1:exon
so has part: feature:4336839-4337038:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4270696-4273142:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4416097-4416286:-1:exon

position:4416097:-1
position: 4416097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4394364-4394409:-1:exon

position:4394364:-1
position: 4394364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4394409:-1
position: 4394409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4378828-4378882:-1:exon

position:4378828:-1
position: 4378828
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4378882:-1
position: 4378882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4376692-4376722:-1:exon

position:4376692:-1
position: 4376692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376722:-1
position: 4376722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4336839-4337038:-1:exon

position:4336839:-1
position: 4336839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4337038:-1
position: 4337038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4329167-4329958:-1:exon

position:4329167:-1
position: 4329167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4329958:-1
position: 4329958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4324401-4324535:-1:exon

position:4324401:-1
position: 4324401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4324535:-1
position: 4324535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4322372-4322462:-1:exon

position:4322372:-1
position: 4322372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4322462:-1
position: 4322462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4321181-4321285:-1:exon

position:4321181:-1
position: 4321181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4321285:-1
position: 4321285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4319000-4319193:-1:exon

position:4319000:-1
position: 4319000
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4319193:-1
position: 4319193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4316636-4316847:-1:exon

position:4316636:-1
position: 4316636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4316847:-1
position: 4316847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4307964-4308209:-1:exon

position:4307964:-1
position: 4307964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4308209:-1
position: 4308209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4301141-4301256:-1:exon

position:4301141:-1
position: 4301141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4301256:-1
position: 4301256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4294336-4294398:-1:exon

position:4294336:-1
position: 4294336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4294398:-1
position: 4294398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4293473-4293541:-1:exon

position:4293473:-1
position: 4293473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4293541:-1
position: 4293541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4290841-4290903:-1:exon

position:4290841:-1
position: 4290841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4290903:-1
position: 4290903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4290432-4290512:-1:exon

position:4290432:-1
position: 4290432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4290512:-1
position: 4290512
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urn:…
SIO_000300: 18
SIO_000628: feature:4289316-4289537:-1:exon

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urn:…
SIO_000300: 19
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SIO_000300: 20
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urn:…
SIO_000300: 21
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ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038579290.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4270696..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882,4394364..4394406,4408456..4408534,4416097..4416286))
location: region:4270696-4416286:-1
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urn:…
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SIO_000300: 15
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SIO_000300: 17
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SIO_000300: 20
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SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:4270696-4273142:-1:exon

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038579291.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4270696..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882,4394364..4394409,4408456..4408534,4416097..4416228))
location: region:4270696-4416228:-1
so has part: feature:4416097-4416228:-1:exon
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so has part: feature:4275280-4275423:-1:exon
so has part: feature:4270696-4273142:-1:exon

position:4416228:-1
position: 4416228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
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SIO_000300: 11
SIO_000628: feature:4319000-4319193:-1:exon

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SIO_000300: 13
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SIO_000300: 15
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SIO_000300: 18
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urn:…
SIO_000300: 23
SIO_000628: feature:4270696-4273142:-1:exon

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X21
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038579294.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4270696..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882,4385404..4385507,4386208..4386242))
location: region:4270696-4386242:-1
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position:4386242:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:4386208-4386242:-1:exon

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urn:…
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reference: sequence
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urn:…
SIO_000300: 21
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ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X16
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038579289.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4270696..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882,4385404..4385507,4386208..4386242))
location: region:4270696-4386242:-1
so has part: feature:4386208-4386242:-1:exon
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urn:…
SIO_000300: 1
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SIO_000300: 14
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SIO_000300: 16
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 21
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urn:…
SIO_000300: 22
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ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X20
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_038579293.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4270696..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4337445..4337508,4376692..4376722,4378828..4378882))
location: region:4270696-4378882:-1
so has part: feature:4378828-4378882:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:4378828-4378882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376692-4376722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4337445-4337508:-1:exon

position:4337445:-1
position: 4337445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4337508:-1
position: 4337508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4336839-4337038:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4270696-4273142:-1:exon

ST18
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ST18
product: ST18 C2H2C-type zinc finger transcription factor, transcript variant X22
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_038579295.1
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4270696..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4376692..4376722,4378828..4378845))
location: region:4270696-4378845:-1
so has part: feature:4378828-4378845:-1:exon
so has part: feature:4376692-4376722:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4270696-4273142:-1:exon

position:4378845:-1
position: 4378845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4378828-4378845:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376692-4376722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4270696-4273142:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X11
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4273002..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882))
location: region:4273002-4378882:-1
so has part: feature:4378828-4378882:-1:exon
so has part: feature:4376692-4376722:-1:exon
so has part: feature:4336839-4337038:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4273002-4273142:-1:exon

XP_038435222.1
type: Protein
SIO_000068: ncbiprotein

position:4273002:-1
position: 4273002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4378828-4378882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376692-4376722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4336839-4337038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4273002-4273142:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X9
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4273002..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882))
location: region:4273002-4378882:-1
so has part: feature:4378828-4378882:-1:exon
so has part: feature:4376692-4376722:-1:exon
so has part: feature:4336839-4337038:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4273002-4273142:-1:exon

XP_038435217.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4378828-4378882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376692-4376722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4336839-4337038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4273002-4273142:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X9
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4273002..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882))
location: region:4273002-4378882:-1
so has part: feature:4378828-4378882:-1:exon
so has part: feature:4376692-4376722:-1:exon
so has part: feature:4336839-4337038:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4273002-4273142:-1:exon

XP_038435218.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4378828-4378882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376692-4376722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4336839-4337038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4273002-4273142:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X9
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4273002..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882))
location: region:4273002-4378882:-1
so has part: feature:4378828-4378882:-1:exon
so has part: feature:4376692-4376722:-1:exon
so has part: feature:4336839-4337038:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4273002-4273142:-1:exon

XP_038435219.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4378828-4378882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376692-4376722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4336839-4337038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4273002-4273142:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X9
translation: MDAEAEDKTLRTRSKGTKVPIDSLIQELSAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4273002..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4376692..4376722,4378828..4378882))
location: region:4273002-4378882:-1
so has part: feature:4378828-4378882:-1:exon
so has part: feature:4376692-4376722:-1:exon
so has part: feature:4336839-4337038:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4273002-4273142:-1:exon

XP_038435220.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4378828-4378882:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376692-4376722:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4336839-4337038:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4273002-4273142:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X10
translation: MCNCGRDKQFGAAYDCSMAKKRRAAEQALGVPVNKRKSLLMKPRHYSPNLDCREECDDRTQAEEEDGFAEASDHTATEEIMIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4273002..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329958,4336839..4337038,4337445..4337476))
location: region:4273002-4337476:-1
so has part: feature:4337445-4337476:-1:exon
so has part: feature:4336839-4337038:-1:exon
so has part: feature:4329167-4329958:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4273002-4273142:-1:exon

XP_038435221.1
type: Protein
SIO_000068: ncbiprotein

position:4337476:-1
position: 4337476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4337445-4337476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4336839-4337038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4329167-4329958:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4273002-4273142:-1:exon

ST18
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ST18
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: suppression of tumorigenicity 18 protein isoform X1
translation: MIKPMDENLHSTAQENSNGKEDRYGCYQELVVKSLMHLGKFEKNVSVQTISENLNDSGIQSLKAESDEADECFLIHSDDGKEKIDDSQLQFCSSDDSESNSESAENGWDSGSNFSEETKPHRVPKYILVDNRKDLLEVPEIKTEGDKFISCENMCDSETERRDPQNAHVEPLDGKAQLSFSGMEEENNECLAATTEESVDLEKAKGNLSLLEQAIALQAERGCVFHNTYKELDRFLLEHLAGERRQTKVIDMGGRQIFNNKHSPRPEKRETKCPIPGCDGTGHVTGLYPHHRSLSGCPHKVRVPLEILAMHENVLKCPTPGCTGRGHVNSNRNTHRSLSGCPIAAAEKLAMSQDKNQLDSPKTGQCPDQIHRTSLVKQIEFNFRSQAITSPRAMVSKEQEKFGKVPFDYASFDAQVFGKRPLVQTGQGRKTPPFPESKHFSNPGKFPNRLPSAGAHTQSPCRASSYSYGQCSEDTHIAAAAAILNLSTRCREAADILSNKPQSLHAKGAEIEVDENGTLDLSLKKNRILDKAAPLTSSNTSVPTPSSSPFKTSSILVNAAFYQALCDQEGWDTPINYSKTHGKTEEEKEKDPVSSLENLEEKKFPGEASIPSPKPKLHARDLKKELITCPTPGCDGSGHVTGNYASHRSVSGCPLADKTLKSLMAANSQELKCPTPGCDGSGHVTGNYASHRSLSGCPRARKGGVKMTPTKEEKEDPELKCPVIGCDGQGHISGKYTSHRTASGCPLAAKRQKENPLNGAPLSWKLNKQELPHCPLPGCNGLGHVNNVFVTHRSLSGCPLNAQAIKKGKVSEELMTIKLKATGGLESDEEIRHLDEEIKELNESNLKIEADMMKLQTQITSMESNLKTIEEENKLIEQNNESLLKELAGLSQALISSLADIQLPQMGPISEQNFEAYVNTLTDMYSNLERDYSPECKALLESIKQAVKGIHV
SIO_010081: ST18
subclass of: SO_0000673
so part of: ST18
location: complement(join(4273002..4273142,4275280..4275423,4277321..4277424,4283890..4283978,4289316..4289537,4290432..4290512,4290841..4290903,4293473..4293541,4294336..4294398,4301141..4301256,4307964..4308209,4316636..4316847,4319000..4319193,4321181..4321285,4322372..4322462,4324401..4324535,4329167..4329950))
location: region:4273002-4329950:-1
so has part: feature:4329167-4329950:-1:exon
so has part: feature:4324401-4324535:-1:exon
so has part: feature:4322372-4322462:-1:exon
so has part: feature:4321181-4321285:-1:exon
so has part: feature:4319000-4319193:-1:exon
so has part: feature:4316636-4316847:-1:exon
so has part: feature:4307964-4308209:-1:exon
so has part: feature:4301141-4301256:-1:exon
so has part: feature:4294336-4294398:-1:exon
so has part: feature:4293473-4293541:-1:exon
so has part: feature:4290841-4290903:-1:exon
so has part: feature:4290432-4290512:-1:exon
so has part: feature:4289316-4289537:-1:exon
so has part: feature:4283890-4283978:-1:exon
so has part: feature:4277321-4277424:-1:exon
so has part: feature:4275280-4275423:-1:exon
so has part: feature:4273002-4273142:-1:exon

XP_038435223.1
type: Protein
SIO_000068: ncbiprotein

position:4329950:-1
position: 4329950
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4329167-4329950:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4324401-4324535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4322372-4322462:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4321181-4321285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4319000-4319193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4316636-4316847:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4307964-4308209:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4301141-4301256:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4294336-4294398:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4293473-4293541:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4290841-4290903:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4290432-4290512:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4289316-4289537:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4283890-4283978:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4277321-4277424:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4275280-4275423:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4273002-4273142:-1:exon

LOC119866695
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4273296..4277263
location: region:4273296-4277263:1
so has part: feature:4273296-4277263:1:exon
subclass of: SO_0000011

119866695
type: Gene
SIO_000068: ncbigene

position:4273296:1
position: 4273296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4277263:1
position: 4277263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4273296-4277263:1:exon

LOC119866695
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119866695
product: uncharacterized LOC119866695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380949.1
SIO_010081: LOC119866695
subclass of: SO_0000673
so part of: LOC119866695
location: join(4273296..4273593,4274102..4274363,4275403..4277263)
location: region:4273296-4277263:1
so has part: feature:4273296-4273593:1:exon
so has part: feature:4274102-4274363:1:exon
so has part: feature:4275403-4277263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4273296-4273593:1:exon

position:4273593:1
position: 4273593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4274102-4274363:1:exon

position:4274102:1
position: 4274102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4274363:1
position: 4274363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4275403-4277263:1:exon

position:4275403:1
position: 4275403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119866782
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866782
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(4351985..4352175)
location: region:4351985-4352175:-1
so has part: feature:4351985-4352175:-1:exon

119866782
type: Gene
SIO_000068: ncbigene

position:4351985:-1
position: 4351985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4352175:-1
position: 4352175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4351985-4352175:-1:exon

LOC119866782
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866782
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119866782
subclass of: SO_0000673
so part of: LOC119866782
location: complement(4351985..4352175)
location: region:4351985-4352175:-1
so has part: feature:4351985-4352175:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4351985-4352175:-1:exon

LOC106557997
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC106557997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4547080..4547352
location: region:4547080-4547352:1
so has part: feature:4547080-4547352:1:exon
subclass of: SO_0000010

106557997
type: Gene
SIO_000068: ncbigene

position:4547080:1
position: 4547080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4547352:1
position: 4547352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4547080-4547352:1:exon

LOC106557997
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC106557997
product: ctenidin-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038579847.1
SIO_010081: LOC106557997
subclass of: SO_0000673
so part of: LOC106557997
location: 4547080..4547352
location: region:4547080-4547352:1
so has part: feature:4547080-4547352:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4547080-4547352:1:exon

LOC106557997
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC106557997
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ctenidin-1-like
translation: MAGDAYGGCGGSDDNGGGENCGGGSGEDEVGSGGGREGGNMVRGKVGGGGGGGGKVAGCGDGVGEVDGRRMVEQMKWMVLVLVQVVTRKL
SIO_010081: LOC106557997
subclass of: SO_0000673
so part of: LOC106557997
location: 4547080..4547352
location: region:4547080-4547352:1
so has part: feature:4547080-4547352:1:exon

XP_038435775.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4547080-4547352:1:exon

LOC100685309
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100685309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4605608..4606565
location: region:4605608-4606565:1
so has part: feature:4605608-4606565:1:exon
subclass of: SO_0000010

100685309
type: Gene
SIO_000068: ncbigene

position:4605608:1
position: 4605608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4606565:1
position: 4606565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4605608-4606565:1:exon

LOC100685309
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC100685309
product: general transcription factor IIH subunit 3-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038579296.1
SIO_010081: LOC100685309
subclass of: SO_0000673
so part of: LOC100685309
location: 4605608..4606565
location: region:4605608-4606565:1
so has part: feature:4605608-4606565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4605608-4606565:1:exon

LOC100685309
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC100685309
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: general transcription factor IIH subunit 3-like
translation: MVLGNSLFMNHSNKLAVIASHIQESRFLYPGKNGKLGDFFGDPGNPSEFSPSGSKDGIYELFTAANEVIVEEIKDLTIKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQTILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQGSQLILPPPIHVDYQAACFCHRNLIEIGYVCSVCLSIFCNFSPICPTCETAFKISLPLVLKAKKKKLKVSV
SIO_010081: LOC100685309
subclass of: SO_0000673
so part of: LOC100685309
location: 4605646..4606448
location: region:4605646-4606448:1
so has part: feature:4605646-4606448:1:exon

XP_038435224.1
type: Protein
SIO_000068: ncbiprotein

position:4605646:1
position: 4605646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4606448:1
position: 4606448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4605646-4606448:1:exon

LOC102154400
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102154400
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4622137..4636201)
location: region:4622137-4636201:-1
so has part: feature:4622137-4636201:-1:exon
subclass of: SO_0000011

102154400
type: Gene
SIO_000068: ncbigene

position:4622137:-1
position: 4622137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4636201:-1
position: 4636201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4622137-4636201:-1:exon

LOC102154400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154400
product: uncharacterized LOC102154400, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380952.1
SIO_010081: LOC102154400
subclass of: SO_0000673
so part of: LOC102154400
location: complement(join(4622137..4622275,4625181..4625370,4626297..4627576,4628218..4628268,4635056..4635106,4635933..4636201))
location: region:4622137-4636201:-1
so has part: feature:4635933-4636201:-1:exon
so has part: feature:4635056-4635106:-1:exon
so has part: feature:4628218-4628268:-1:exon
so has part: feature:4626297-4627576:-1:exon
so has part: feature:4625181-4625370:-1:exon
so has part: feature:4622137-4622275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4635933-4636201:-1:exon

position:4635933:-1
position: 4635933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4635056-4635106:-1:exon

position:4635056:-1
position: 4635056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4635106:-1
position: 4635106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4628218-4628268:-1:exon

position:4628218:-1
position: 4628218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4628268:-1
position: 4628268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4626297-4627576:-1:exon

position:4626297:-1
position: 4626297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4627576:-1
position: 4627576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4625181-4625370:-1:exon

position:4625181:-1
position: 4625181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4625370:-1
position: 4625370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4622137-4622275:-1:exon

position:4622275:-1
position: 4622275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102154400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154400
product: uncharacterized LOC102154400, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380950.1
SIO_010081: LOC102154400
subclass of: SO_0000673
so part of: LOC102154400
location: complement(join(4622137..4622275,4625181..4625529,4626297..4627576,4628218..4628268,4635056..4635106,4635933..4636201))
location: region:4622137-4636201:-1
so has part: feature:4635933-4636201:-1:exon
so has part: feature:4635056-4635106:-1:exon
so has part: feature:4628218-4628268:-1:exon
so has part: feature:4626297-4627576:-1:exon
so has part: feature:4625181-4625529:-1:exon
so has part: feature:4622137-4622275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4635933-4636201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4635056-4635106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4628218-4628268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4626297-4627576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4625181-4625529:-1:exon

position:4625529:-1
position: 4625529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4622137-4622275:-1:exon

LOC102154400
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102154400
product: uncharacterized LOC102154400, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380951.1
SIO_010081: LOC102154400
subclass of: SO_0000673
so part of: LOC102154400
location: complement(join(4622137..4622289,4625181..4625529,4626297..4627576,4628218..4628268,4635056..4635106,4635933..4636201))
location: region:4622137-4636201:-1
so has part: feature:4635933-4636201:-1:exon
so has part: feature:4635056-4635106:-1:exon
so has part: feature:4628218-4628268:-1:exon
so has part: feature:4626297-4627576:-1:exon
so has part: feature:4625181-4625529:-1:exon
so has part: feature:4622137-4622289:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4635933-4636201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4635056-4635106:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4628218-4628268:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4626297-4627576:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4625181-4625529:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4622137-4622289:-1:exon

position:4622289:-1
position: 4622289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111093188
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093188
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4646499..4649833)
location: region:4646499-4649833:-1
so has part: feature:4646499-4649833:-1:exon
subclass of: SO_0000011

111093188
type: Gene
SIO_000068: ncbigene

position:4646499:-1
position: 4646499
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4649833:-1
position: 4649833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4646499-4649833:-1:exon

LOC111093188
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093188
product: uncharacterized LOC111093188
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005380953.1
SIO_010081: LOC111093188
subclass of: SO_0000673
so part of: LOC111093188
location: complement(join(4646499..4646849,4648169..4648243,4649596..4649833))
location: region:4646499-4649833:-1
so has part: feature:4649596-4649833:-1:exon
so has part: feature:4648169-4648243:-1:exon
so has part: feature:4646499-4646849:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4649596-4649833:-1:exon

position:4649596:-1
position: 4649596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4648169-4648243:-1:exon

position:4648169:-1
position: 4648169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4648243:-1
position: 4648243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4646499-4646849:-1:exon

position:4646849:-1
position: 4646849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119866797
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866797
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 4682601..4682704
location: region:4682601-4682704:1
so has part: feature:4682601-4682704:1:exon
subclass of: SO_0000623

119866797
type: Gene
SIO_000068: ncbigene

position:4682601:1
position: 4682601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4682704:1
position: 4682704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4682601-4682704:1:exon

LOC119866797
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: snRNA
gene: LOC119866797
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005381308.1
SIO_010081: LOC119866797
subclass of: SO_0000673
so part of: LOC119866797
location: 4682601..4682704
location: region:4682601-4682704:1
so has part: feature:4682601-4682704:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4682601-4682704:1:exon

LOC119866664
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866664
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4697579..4698132)
location: region:4697579-4698132:-1
so has part: feature:4697579-4698132:-1:exon

119866664
type: Gene
SIO_000068: ncbigene

position:4697579:-1
position: 4697579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4698132:-1
position: 4698132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4697579-4698132:-1:exon

LOC119866664
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866664
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC119866664
subclass of: SO_0000673
so part of: LOC119866664
location: complement(4697579..4698132)
location: region:4697579-4698132:-1
so has part: feature:4697579-4698132:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4697579-4698132:-1:exon

RB1CC1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4742370..4841030)
location: region:4742370-4841030:-1
so has part: feature:4742370-4841030:-1:exon
subclass of: SO_0000010

477876
type: Gene
SIO_000068: ncbigene

position:4742370:-1
position: 4742370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4841030:-1
position: 4841030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4742370-4841030:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579298.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4742370..4743762,4744553..4744623,4747596..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764262,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813874))
location: region:4742370-4813874:-1
so has part: feature:4813804-4813874:-1:exon
so has part: feature:4812430-4812556:-1:exon
so has part: feature:4812086-4812256:-1:exon
so has part: feature:4798092-4798294:-1:exon
so has part: feature:4796339-4796765:-1:exon
so has part: feature:4790778-4790948:-1:exon
so has part: feature:4781580-4781764:-1:exon
so has part: feature:4781224-4781410:-1:exon
so has part: feature:4781059-4781140:-1:exon
so has part: feature:4780745-4780806:-1:exon
so has part: feature:4779318-4779421:-1:exon
so has part: feature:4778760-4778886:-1:exon
so has part: feature:4776770-4778670:-1:exon
so has part: feature:4764097-4764262:-1:exon
so has part: feature:4761243-4761351:-1:exon
so has part: feature:4760902-4761142:-1:exon
so has part: feature:4752808-4752862:-1:exon
so has part: feature:4751676-4751723:-1:exon
so has part: feature:4749887-4749945:-1:exon
so has part: feature:4747596-4747732:-1:exon
so has part: feature:4744553-4744623:-1:exon
so has part: feature:4742370-4743762:-1:exon

position:4813874:-1
position: 4813874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4813804-4813874:-1:exon

position:4813804:-1
position: 4813804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4812430-4812556:-1:exon

position:4812430:-1
position: 4812430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4812556:-1
position: 4812556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4812086-4812256:-1:exon

position:4812086:-1
position: 4812086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4812256:-1
position: 4812256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4798092-4798294:-1:exon

position:4798092:-1
position: 4798092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4798294:-1
position: 4798294
reference: sequence
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urn:…
SIO_000300: 5
SIO_000628: feature:4796339-4796765:-1:exon

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SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:4781224-4781410:-1:exon

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SIO_000300: 9
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urn:…
SIO_000300: 10
SIO_000628: feature:4780745-4780806:-1:exon

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urn:…
SIO_000300: 11
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urn:…
SIO_000300: 12
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urn:…
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urn:…
SIO_000300: 15
SIO_000628: feature:4761243-4761351:-1:exon

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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:4752808-4752862:-1:exon

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urn:…
SIO_000300: 18
SIO_000628: feature:4751676-4751723:-1:exon

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urn:…
SIO_000300: 19
SIO_000628: feature:4749887-4749945:-1:exon

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urn:…
SIO_000300: 20
SIO_000628: feature:4747596-4747732:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:4744553-4744623:-1:exon

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urn:…
SIO_000300: 22
SIO_000628: feature:4742370-4743762:-1:exon

position:4743762:-1
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reference: sequence
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RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579299.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4743500..4743762,4744553..4744623,4747605..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764262,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813874))
location: region:4743500-4813874:-1
so has part: feature:4813804-4813874:-1:exon
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so has part: feature:4779318-4779421:-1:exon
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so has part: feature:4764097-4764262:-1:exon
so has part: feature:4761243-4761351:-1:exon
so has part: feature:4760902-4761142:-1:exon
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so has part: feature:4744553-4744623:-1:exon
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position:4743500:-1
position: 4743500
reference: sequence
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urn:…
SIO_000300: 1
SIO_000628: feature:4813804-4813874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4812430-4812556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4812086-4812256:-1:exon

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SIO_000300: 4
SIO_000628: feature:4798092-4798294:-1:exon

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SIO_000300: 5
SIO_000628: feature:4796339-4796765:-1:exon

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SIO_000300: 6
SIO_000628: feature:4790778-4790948:-1:exon

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SIO_000300: 7
SIO_000628: feature:4781580-4781764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4781224-4781410:-1:exon

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SIO_000300: 9
SIO_000628: feature:4781059-4781140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4780745-4780806:-1:exon

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SIO_000300: 11
SIO_000628: feature:4779318-4779421:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4778760-4778886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4776770-4778670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4764097-4764262:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4761243-4761351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760902-4761142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4752808-4752862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4751676-4751723:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4749887-4749945:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4747605-4747732:-1:exon

position:4747605:-1
position: 4747605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:4744553-4744623:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4743500-4743762:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038579300.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4743651..4743762,4744553..4744623,4747596..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764241,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813925,4814999..4815113,4840874..4841030))
location: region:4743651-4841030:-1
so has part: feature:4840874-4841030:-1:exon
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so has part: feature:4798092-4798294:-1:exon
so has part: feature:4796339-4796765:-1:exon
so has part: feature:4790778-4790948:-1:exon
so has part: feature:4781580-4781764:-1:exon
so has part: feature:4781224-4781410:-1:exon
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so has part: feature:4779318-4779421:-1:exon
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position:4743651:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 1
SIO_000628: feature:4840874-4841030:-1:exon

position:4840874:-1
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reference: sequence
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urn:…
SIO_000300: 2
SIO_000628: feature:4814999-4815113:-1:exon

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reference: sequence
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position:4815113:-1
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reference: sequence
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urn:…
SIO_000300: 3
SIO_000628: feature:4813804-4813925:-1:exon

position:4813925:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:4812430-4812556:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4812086-4812256:-1:exon

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SIO_000300: 6
SIO_000628: feature:4798092-4798294:-1:exon

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SIO_000300: 7
SIO_000628: feature:4796339-4796765:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4790778-4790948:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4781580-4781764:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4781224-4781410:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4781059-4781140:-1:exon

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SIO_000300: 12
SIO_000628: feature:4780745-4780806:-1:exon

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SIO_000300: 13
SIO_000628: feature:4779318-4779421:-1:exon

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SIO_000300: 14
SIO_000628: feature:4778760-4778886:-1:exon

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SIO_000300: 15
SIO_000628: feature:4776770-4778670:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4764097-4764241:-1:exon

position:4764241:-1
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reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:4761243-4761351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4760902-4761142:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4752808-4752862:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4751676-4751723:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4749887-4749945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4747596-4747732:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4744553-4744623:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4743651-4743762:-1:exon

RB1CC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RB1CC1
product: RB1 inducible coiled-coil 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579297.1
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4743651..4743762,4744553..4744623,4747596..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764262,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813925,4814999..4815113,4840874..4841023))
location: region:4743651-4841023:-1
so has part: feature:4840874-4841023:-1:exon
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so has part: feature:4744553-4744623:-1:exon
so has part: feature:4743651-4743762:-1:exon

position:4841023:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4840874-4841023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4814999-4815113:-1:exon

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SIO_000300: 3
SIO_000628: feature:4813804-4813925:-1:exon

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SIO_000300: 4
SIO_000628: feature:4812430-4812556:-1:exon

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SIO_000300: 5
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SIO_000300: 6
SIO_000628: feature:4798092-4798294:-1:exon

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SIO_000300: 7
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SIO_000300: 8
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SIO_000300: 13
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urn:…
SIO_000300: 14
SIO_000628: feature:4778760-4778886:-1:exon

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urn:…
SIO_000300: 16
SIO_000628: feature:4764097-4764262:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4761243-4761351:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4760902-4761142:-1:exon

urn:…
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SIO_000628: feature:4752808-4752862:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4751676-4751723:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4749887-4749945:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4747596-4747732:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4744553-4744623:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4743651-4743762:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X3
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4743685..4743762,4744553..4744623,4747596..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764241,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813874))
location: region:4743685-4813874:-1
so has part: feature:4813804-4813874:-1:exon
so has part: feature:4812430-4812556:-1:exon
so has part: feature:4812086-4812256:-1:exon
so has part: feature:4798092-4798294:-1:exon
so has part: feature:4796339-4796765:-1:exon
so has part: feature:4790778-4790948:-1:exon
so has part: feature:4781580-4781764:-1:exon
so has part: feature:4781224-4781410:-1:exon
so has part: feature:4781059-4781140:-1:exon
so has part: feature:4780745-4780806:-1:exon
so has part: feature:4779318-4779421:-1:exon
so has part: feature:4778760-4778886:-1:exon
so has part: feature:4776770-4778670:-1:exon
so has part: feature:4764097-4764241:-1:exon
so has part: feature:4761243-4761351:-1:exon
so has part: feature:4760902-4761142:-1:exon
so has part: feature:4752808-4752862:-1:exon
so has part: feature:4751676-4751723:-1:exon
so has part: feature:4749887-4749945:-1:exon
so has part: feature:4747596-4747732:-1:exon
so has part: feature:4744553-4744623:-1:exon
so has part: feature:4743685-4743762:-1:exon

XP_038435228.1
type: Protein
SIO_000068: ncbiprotein

position:4743685:-1
position: 4743685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4813804-4813874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4812430-4812556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4812086-4812256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4798092-4798294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4796339-4796765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4790778-4790948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4781580-4781764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4781224-4781410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4781059-4781140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4780745-4780806:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4779318-4779421:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4778760-4778886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4776770-4778670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4764097-4764241:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4761243-4761351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760902-4761142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4752808-4752862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4751676-4751723:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4749887-4749945:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4747596-4747732:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4744553-4744623:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4743685-4743762:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X2
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4743685..4743762,4744553..4744623,4747605..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764262,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813874))
location: region:4743685-4813874:-1
so has part: feature:4813804-4813874:-1:exon
so has part: feature:4812430-4812556:-1:exon
so has part: feature:4812086-4812256:-1:exon
so has part: feature:4798092-4798294:-1:exon
so has part: feature:4796339-4796765:-1:exon
so has part: feature:4790778-4790948:-1:exon
so has part: feature:4781580-4781764:-1:exon
so has part: feature:4781224-4781410:-1:exon
so has part: feature:4781059-4781140:-1:exon
so has part: feature:4780745-4780806:-1:exon
so has part: feature:4779318-4779421:-1:exon
so has part: feature:4778760-4778886:-1:exon
so has part: feature:4776770-4778670:-1:exon
so has part: feature:4764097-4764262:-1:exon
so has part: feature:4761243-4761351:-1:exon
so has part: feature:4760902-4761142:-1:exon
so has part: feature:4752808-4752862:-1:exon
so has part: feature:4751676-4751723:-1:exon
so has part: feature:4749887-4749945:-1:exon
so has part: feature:4747605-4747732:-1:exon
so has part: feature:4744553-4744623:-1:exon
so has part: feature:4743685-4743762:-1:exon

XP_038435227.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4813804-4813874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4812430-4812556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4812086-4812256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4798092-4798294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4796339-4796765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4790778-4790948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4781580-4781764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4781224-4781410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4781059-4781140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4780745-4780806:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4779318-4779421:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4778760-4778886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4776770-4778670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4764097-4764262:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4761243-4761351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760902-4761142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4752808-4752862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4751676-4751723:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4749887-4749945:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4747605-4747732:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4744553-4744623:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4743685-4743762:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X1
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4743685..4743762,4744553..4744623,4747596..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764262,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813874))
location: region:4743685-4813874:-1
so has part: feature:4813804-4813874:-1:exon
so has part: feature:4812430-4812556:-1:exon
so has part: feature:4812086-4812256:-1:exon
so has part: feature:4798092-4798294:-1:exon
so has part: feature:4796339-4796765:-1:exon
so has part: feature:4790778-4790948:-1:exon
so has part: feature:4781580-4781764:-1:exon
so has part: feature:4781224-4781410:-1:exon
so has part: feature:4781059-4781140:-1:exon
so has part: feature:4780745-4780806:-1:exon
so has part: feature:4779318-4779421:-1:exon
so has part: feature:4778760-4778886:-1:exon
so has part: feature:4776770-4778670:-1:exon
so has part: feature:4764097-4764262:-1:exon
so has part: feature:4761243-4761351:-1:exon
so has part: feature:4760902-4761142:-1:exon
so has part: feature:4752808-4752862:-1:exon
so has part: feature:4751676-4751723:-1:exon
so has part: feature:4749887-4749945:-1:exon
so has part: feature:4747596-4747732:-1:exon
so has part: feature:4744553-4744623:-1:exon
so has part: feature:4743685-4743762:-1:exon

XP_038435225.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4813804-4813874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4812430-4812556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4812086-4812256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4798092-4798294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4796339-4796765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4790778-4790948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4781580-4781764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4781224-4781410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4781059-4781140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4780745-4780806:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4779318-4779421:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4778760-4778886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4776770-4778670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4764097-4764262:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4761243-4761351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760902-4761142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4752808-4752862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4751676-4751723:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4749887-4749945:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4747596-4747732:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4744553-4744623:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4743685-4743762:-1:exon

RB1CC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RB1CC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RB1-inducible coiled-coil protein 1 isoform X1
translation: MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTELVLSPDMPRATNQSLLTSFHKSVEHIAPDTTDAEIGKEIRESCQNTVQQDETSVDAKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASISQTSPQSASSPRIESTTGIATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNICGKEDLGDHTSLNVQLERCRVVAQDSNFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTALEIRNIIEKVKYSLEITLSEKHQKELQSLKSEYEGKLDALIKESEENENKIKKLKGDLVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEDLKKLHVENDEKMQLLRTELQCLEQSHLKELEDTLQFRHTQEFEKVMTDHRVSLEKLKKENQQRIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLKAELNKVTSLHQQAFEIEKNLKEEIVELQSKLDAELSALEKQKDEKLTQQEEKYEAIIQKLEKDKEKFVMSKEQDREQLIQKLNCEKEEAIQTALKEFKLEKEAVEKELLEKVKHLEDQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
SIO_010081: RB1CC1
subclass of: SO_0000673
so part of: RB1CC1
location: complement(join(4743685..4743762,4744553..4744623,4747596..4747732,4749887..4749945,4751676..4751723,4752808..4752862,4760902..4761142,4761243..4761351,4764097..4764262,4776770..4778670,4778760..4778886,4779318..4779421,4780745..4780806,4781059..4781140,4781224..4781410,4781580..4781764,4790778..4790948,4796339..4796765,4798092..4798294,4812086..4812256,4812430..4812556,4813804..4813874))
location: region:4743685-4813874:-1
so has part: feature:4813804-4813874:-1:exon
so has part: feature:4812430-4812556:-1:exon
so has part: feature:4812086-4812256:-1:exon
so has part: feature:4798092-4798294:-1:exon
so has part: feature:4796339-4796765:-1:exon
so has part: feature:4790778-4790948:-1:exon
so has part: feature:4781580-4781764:-1:exon
so has part: feature:4781224-4781410:-1:exon
so has part: feature:4781059-4781140:-1:exon
so has part: feature:4780745-4780806:-1:exon
so has part: feature:4779318-4779421:-1:exon
so has part: feature:4778760-4778886:-1:exon
so has part: feature:4776770-4778670:-1:exon
so has part: feature:4764097-4764262:-1:exon
so has part: feature:4761243-4761351:-1:exon
so has part: feature:4760902-4761142:-1:exon
so has part: feature:4752808-4752862:-1:exon
so has part: feature:4751676-4751723:-1:exon
so has part: feature:4749887-4749945:-1:exon
so has part: feature:4747596-4747732:-1:exon
so has part: feature:4744553-4744623:-1:exon
so has part: feature:4743685-4743762:-1:exon

XP_038435226.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4813804-4813874:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4812430-4812556:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4812086-4812256:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4798092-4798294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4796339-4796765:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4790778-4790948:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4781580-4781764:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4781224-4781410:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4781059-4781140:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4780745-4780806:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4779318-4779421:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4778760-4778886:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4776770-4778670:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4764097-4764262:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4761243-4761351:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4760902-4761142:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4752808-4752862:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4751676-4751723:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4749887-4749945:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4747596-4747732:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4744553-4744623:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4743685-4743762:-1:exon

LOC111093178
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093178
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4885026..4896021)
location: region:4885026-4896021:-1
so has part: feature:4885026-4896021:-1:exon
subclass of: SO_0000011

111093178
type: Gene
SIO_000068: ncbigene

position:4885026:-1
position: 4885026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4896021:-1
position: 4896021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4885026-4896021:-1:exon

LOC111093178
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093178
product: uncharacterized LOC111093178
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380954.1
SIO_010081: LOC111093178
subclass of: SO_0000673
so part of: LOC111093178
location: complement(join(4885026..4885421,4886457..4886559,4895962..4896021))
location: region:4885026-4896021:-1
so has part: feature:4895962-4896021:-1:exon
so has part: feature:4886457-4886559:-1:exon
so has part: feature:4885026-4885421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4895962-4896021:-1:exon

position:4895962:-1
position: 4895962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4886457-4886559:-1:exon

position:4886457:-1
position: 4886457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4886559:-1
position: 4886559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4885026-4885421:-1:exon

position:4885421:-1
position: 4885421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100685469
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100685469
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4931295..4937383)
location: region:4931295-4937383:-1
so has part: feature:4931295-4937383:-1:exon

100685469
type: Gene
SIO_000068: ncbigene

position:4931295:-1
position: 4931295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4937383:-1
position: 4937383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4931295-4937383:-1:exon

LOC100685469
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685469
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100685469
subclass of: SO_0000673
so part of: LOC100685469
location: complement(4931295..4931584)
location: region:4931295-4931584:-1
so has part: feature:4931295-4931584:-1:exon

position:4931584:-1
position: 4931584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4931295-4931584:-1:exon

LOC100685469
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685469
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100685469
subclass of: SO_0000673
so part of: LOC100685469
location: complement(4932020..4932342)
location: region:4932020-4932342:-1
so has part: feature:4932020-4932342:-1:exon

position:4932020:-1
position: 4932020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4932342:-1
position: 4932342
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4932020-4932342:-1:exon

LOC100685469
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685469
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100685469
subclass of: SO_0000673
so part of: LOC100685469
location: complement(4937348..4937383)
location: region:4937348-4937383:-1
so has part: feature:4937348-4937383:-1:exon

position:4937348:-1
position: 4937348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4937348-4937383:-1:exon

LOC608876
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC608876
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4949113..4950261
location: region:4949113-4950261:1
so has part: feature:4949113-4950261:1:exon
subclass of: SO_0000010

608876
type: Gene
SIO_000068: ncbigene

position:4949113:1
position: 4949113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4950261:1
position: 4950261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4949113-4950261:1:exon

LOC608876
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC608876
product: 40S ribosomal protein SA-like, transcript variant X1
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038579301.1
SIO_010081: LOC608876
subclass of: SO_0000673
so part of: LOC608876
location: join(4949113..4949833,4950020..4950261)
location: region:4949113-4950261:1
so has part: feature:4949113-4949833:1:exon
so has part: feature:4950020-4950261:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4949113-4949833:1:exon

position:4949833:1
position: 4949833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4950020-4950261:1:exon

position:4950020:1
position: 4950020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC608876
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC608876
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: 40S ribosomal protein SA-like isoform X1
translation: MKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYTINLKRTWEKLLLAARAIVAIENPADVGVTSSRNTGQRAVLKFAAATGATPIAGRFTPGAFTNQIQAAFPEPRLLVVTDPRADHQPLTEASYLNLPTIALCNTDSPLRYVDIAIHCNNKGAHSVGLMWWMLAREVLRMLGTISREHPWEVMPDLYFYRDPEEIEKEEQAAAEKAVTKEEFQGEWTAPAPEFTATQPEVADWSEGVQVPSVPIQQFPTEDWSAQPATEDWSAAPTAQATEWVGXTTEWS
SIO_010081: LOC608876
subclass of: SO_0000673
so part of: LOC608876
location: join(4949216..4949833,4950020..4950261)
location: region:4949216-4950261:1
so has part: feature:4949216-4949833:1:exon
so has part: feature:4950020-4950261:1:exon

XP_038435229.1
type: Protein
SIO_000068: ncbiprotein

position:4949216:1
position: 4949216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4949216-4949833:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4950020-4950261:1:exon

LOC100685939
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100685939
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4969158..4971189
location: region:4969158-4971189:1
so has part: feature:4969158-4971189:1:exon

100685939
type: Gene
SIO_000068: ncbigene

position:4969158:1
position: 4969158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4971189:1
position: 4971189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4969158-4971189:1:exon

LOC100685939
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685939
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 69% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC100685939
subclass of: SO_0000673
so part of: LOC100685939
location: 4969158..4971189
location: region:4969158-4971189:1
so has part: feature:4969158-4971189:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4969158-4971189:1:exon

LOC119877726
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119877726
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5046853..5051420
location: region:5046853-5051420:1
so has part: feature:5046853-5051420:1:exon

119877726
type: Gene
SIO_000068: ncbigene

position:5046853:1
position: 5046853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5051420:1
position: 5051420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5046853-5051420:1:exon

LOC119877726
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119877726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119877726
subclass of: SO_0000673
so part of: LOC119877726
location: 5046853..5046973
location: region:5046853-5046973:1
so has part: feature:5046853-5046973:1:exon

position:5046973:1
position: 5046973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5046853-5046973:1:exon

LOC119877726
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119877726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119877726
subclass of: SO_0000673
so part of: LOC119877726
location: 5047121..5047441
location: region:5047121-5047441:1
so has part: feature:5047121-5047441:1:exon

position:5047121:1
position: 5047121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5047441:1
position: 5047441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5047121-5047441:1:exon

LOC119877726
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119877726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119877726
subclass of: SO_0000673
so part of: LOC119877726
location: 5048849..5048936
location: region:5048849-5048936:1
so has part: feature:5048849-5048936:1:exon

position:5048849:1
position: 5048849
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5048936:1
position: 5048936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5048849-5048936:1:exon

LOC119877726
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119877726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119877726
subclass of: SO_0000673
so part of: LOC119877726
location: 5049597..5049618
location: region:5049597-5049618:1
so has part: feature:5049597-5049618:1:exon

position:5049597:1
position: 5049597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5049618:1
position: 5049618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5049597-5049618:1:exon

LOC119877726
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119877726
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC119877726
subclass of: SO_0000673
so part of: LOC119877726
location: 5051351..5051420
location: region:5051351-5051420:1
so has part: feature:5051351-5051420:1:exon

position:5051351:1
position: 5051351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5051351-5051420:1:exon

NPBWR1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: NPBWR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5078264..5079264
location: region:5078264-5079264:1
so has part: feature:5078264-5079264:1:exon
subclass of: SO_0000010

486949
type: Gene
SIO_000068: ncbigene

position:5078264:1
position: 5078264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5079264:1
position: 5079264
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5078264-5079264:1:exon

NPBWR1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: NPBWR1
product: neuropeptides B and W receptor 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038579239.1
SIO_010081: NPBWR1
subclass of: SO_0000673
so part of: NPBWR1
location: 5078264..5079264
location: region:5078264-5079264:1
so has part: feature:5078264-5079264:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5078264-5079264:1:exon

NPBWR1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: NPBWR1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neuropeptides B/W receptor type 1
translation: MHNGSSSEPGPTNTSCWGPAPGCPNASSPPPPPPLPPPLAVAVPVVYAVICAVGLAGNSAVLYVLLRAPRTKTVTNLFILNLAVADELFTLVLPINIADFLLQQWPFGELMCKLIVAIDQYNTFSSLYFLTVMSADRYLVVLATAESRRVAGRTYSAARAVSLAVWGLVTLVVLPFAVFARLDDEQGRLQCVLVFPQPEAFWWRASRLYTLVLGFAIPVSTICVLYSILLCRLRAMRLDSHARALDRAKKRVTLLVVAILAACLLCWTPYHLSTVVALTTDLPQTPLVIAVSYFITSLSYANSCLNPFLYAFLDDSFRKSLRQLLACRAAA
SIO_010081: NPBWR1
subclass of: SO_0000673
so part of: NPBWR1
location: 5078269..5079264
location: region:5078269-5079264:1
so has part: feature:5078269-5079264:1:exon

XP_038435167.1
type: Protein
SIO_000068: ncbiprotein

position:5078269:1
position: 5078269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5078269-5079264:1:exon

LOC106557998
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC106557998
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5177481..5178786)
location: region:5177481-5178786:-1
so has part: feature:5177481-5178786:-1:exon

106557998
type: Gene
SIO_000068: ncbigene

position:5177481:-1
position: 5177481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5178786:-1
position: 5178786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5177481-5178786:-1:exon

LOC106557998
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC106557998
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC106557998
subclass of: SO_0000673
so part of: LOC106557998
location: complement(5177481..5178786)
location: region:5177481-5178786:-1
so has part: feature:5177481-5178786:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5177481-5178786:-1:exon

LOC100685710
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100685710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5292194..5292813
location: region:5292194-5292813:1
so has part: feature:5292194-5292813:1:exon

100685710
type: Gene
SIO_000068: ncbigene

position:5292194:1
position: 5292194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5292813:1
position: 5292813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5292194-5292813:1:exon

LOC100685710
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100685710
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100685710
subclass of: SO_0000673
so part of: LOC100685710
location: 5292194..5292813
location: region:5292194-5292813:1
so has part: feature:5292194-5292813:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5292194-5292813:1:exon

OPRK1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: OPRK1
note: opioid receptor kappa 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(5327765..5353862)
location: region:5327765-5353862:-1
so has part: feature:5327765-5353862:-1:exon
subclass of: SO_0000010

486951
type: Gene
SIO_000068: ncbigene

position:5327765:-1
position: 5327765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5353862:-1
position: 5353862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5327765-5353862:-1:exon

OPRK1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: OPRK1
product: opioid receptor kappa 1
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001314092.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001314092.1
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5327765..5328297,5338312..5338664,5353606..5353862))
location: region:5327765-5353862:-1
so has part: feature:5353606-5353862:-1:exon
so has part: feature:5338312-5338664:-1:exon
so has part: feature:5327765-5328297:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5353606-5353862:-1:exon

position:5353606:-1
position: 5353606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5338312-5338664:-1:exon

position:5338312:-1
position: 5338312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5338664:-1
position: 5338664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5327765-5328297:-1:exon

position:5328297:-1
position: 5328297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

OPRK1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: OPRK1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: kappa-type opioid receptor
translation: MESPVQIFRGEPGPTCSASTCLLPNGSGWLPGWAETEGNHSGGSEGAQLESAHISPAIPVIITAVYSVVFVVGLVGNSLVMFVIIRYTKMKTATNIYIFNLALADALVTTTMPFQSTVYLMNSWPFGDVLCKIVISIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPMKAKIINICIWLLSSSVGISAIVLGGTKVREDVDVIECSLQFPDDDYSWWDLFMKICVFIFAFVIPVLIIIICYTLMILRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFIICWTPIHIFILVEALGNASHSTAALSSYYFCIALGYTNSSLNPILYAFLDENFKRCFRDFCFPIKMRMERQSTSRVRNTVQDPAYMRDVDGLNKPV
SIO_010081: OPRK1
subclass of: SO_0000673
so part of: OPRK1
location: complement(join(5327765..5328297,5338312..5338664,5353606..5353862))
location: region:5327765-5353862:-1
so has part: feature:5353606-5353862:-1:exon
so has part: feature:5338312-5338664:-1:exon
so has part: feature:5327765-5328297:-1:exon

NP_001301021.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5353606-5353862:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5338312-5338664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5327765-5328297:-1:exon

LOC100856367
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC100856367
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 5640719..5642345
location: region:5640719-5642345:1
so has part: feature:5640719-5642345:1:exon

100856367
type: Gene
SIO_000068: ncbigene

position:5640719:1
position: 5640719
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5642345:1
position: 5642345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5640719-5642345:1:exon

LOC100856367
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC100856367
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC100856367
subclass of: SO_0000673
so part of: LOC100856367
location: 5640719..5642345
location: region:5640719-5642345:1
so has part: feature:5640719-5642345:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5640719-5642345:1:exon

ATP6V1H
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5683983..5845578)
location: region:5683983-5845578:-1
so has part: feature:5683983-5845578:-1:exon
subclass of: SO_0000010

486953
type: Gene
SIO_000068: ncbigene

position:5683983:-1
position: 5683983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5845578:-1
position: 5845578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5683983-5845578:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_038579304.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5683983..5684459,5721051..5721164,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5787199..5787252,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809369,5845494..5845578))
location: region:5683983-5845578:-1
so has part: feature:5845494-5845578:-1:exon
so has part: feature:5809222-5809369:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5787199-5787252:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5721051-5721164:-1:exon
so has part: feature:5683983-5684459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5845494-5845578:-1:exon

position:5845494:-1
position: 5845494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5809222-5809369:-1:exon

position:5809222:-1
position: 5809222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5809369:-1
position: 5809369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5802068-5802170:-1:exon

position:5802068:-1
position: 5802068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5802170:-1
position: 5802170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5801019-5801108:-1:exon

position:5801019:-1
position: 5801019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5801108:-1
position: 5801108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5793729-5793842:-1:exon

position:5793729:-1
position: 5793729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5793842:-1
position: 5793842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5790549-5790653:-1:exon

position:5790549:-1
position: 5790549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5790653:-1
position: 5790653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5787199-5787252:-1:exon

position:5787199:-1
position: 5787199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5787252:-1
position: 5787252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5772378-5772475:-1:exon

position:5772378:-1
position: 5772378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5772475:-1
position: 5772475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5766966-5767158:-1:exon

position:5766966:-1
position: 5766966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5767158:-1
position: 5767158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5755311-5755489:-1:exon

position:5755311:-1
position: 5755311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5755489:-1
position: 5755489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5752520-5752645:-1:exon

position:5752520:-1
position: 5752520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5752645:-1
position: 5752645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5736942-5737043:-1:exon

position:5736942:-1
position: 5736942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5737043:-1
position: 5737043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5721051-5721164:-1:exon

position:5721051:-1
position: 5721051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5721164:-1
position: 5721164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5683983-5684459:-1:exon

position:5684459:-1
position: 5684459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_038579305.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5683983..5684459,5721051..5721164,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809369,5810738..5810987))
location: region:5683983-5810987:-1
so has part: feature:5810738-5810987:-1:exon
so has part: feature:5809222-5809369:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5721051-5721164:-1:exon
so has part: feature:5683983-5684459:-1:exon

position:5810987:-1
position: 5810987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5810738-5810987:-1:exon

position:5810738:-1
position: 5810738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5809222-5809369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5721051-5721164:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5683983-5684459:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 33 samples with support for all annotated introns
transcript id: XM_038579306.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5683983..5684459,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5787199..5787252,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809369,5810738..5810987))
location: region:5683983-5810987:-1
so has part: feature:5810738-5810987:-1:exon
so has part: feature:5809222-5809369:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5787199-5787252:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5683983-5684459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5810738-5810987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5809222-5809369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787199-5787252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5683983-5684459:-1:exon

ATP6V1H
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579303.1
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5683983..5684459,5721051..5721164,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5787199..5787252,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809369,5810738..5810987))
location: region:5683983-5810987:-1
so has part: feature:5810738-5810987:-1:exon
so has part: feature:5809222-5809369:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5787199-5787252:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5721051-5721164:-1:exon
so has part: feature:5683983-5684459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5810738-5810987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5809222-5809369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787199-5787252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5721051-5721164:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5683983-5684459:-1:exon

ATP6V1H
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: ATP6V1H
product: ATPase H+ transporting V1 subunit H, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XR_005380955.1
SIO_010081: ATP6V1H
so part of: ATP6V1H
location: complement(join(5683983..5684459,5716771..5716861,5721051..5721164,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5787199..5787252,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809369,5810738..5810987))
location: region:5683983-5810987:-1
so has part: feature:5810738-5810987:-1:exon
so has part: feature:5809222-5809369:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5787199-5787252:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5721051-5721164:-1:exon
so has part: feature:5716771-5716861:-1:exon
so has part: feature:5683983-5684459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5810738-5810987:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5809222-5809369:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5787199-5787252:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5721051-5721164:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5716771-5716861:-1:exon

position:5716771:-1
position: 5716771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5716861:-1
position: 5716861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5683983-5684459:-1:exon

ATP6V1H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit H isoform X2
translation: MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTVINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPILSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQTAAARS
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5684399..5684459,5721051..5721164,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809334))
location: region:5684399-5809334:-1
so has part: feature:5809222-5809334:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5721051-5721164:-1:exon
so has part: feature:5684399-5684459:-1:exon

XP_038435233.1
type: Protein
SIO_000068: ncbiprotein

position:5684399:-1
position: 5684399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5809334:-1
position: 5809334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5809222-5809334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5721051-5721164:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5684399-5684459:-1:exon

ATP6V1H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit H isoform X3
translation: MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTVINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVGVETGTVSSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPILSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKREYLGKQLQSEQPQTAAARS
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5684399..5684459,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5787199..5787252,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809334))
location: region:5684399-5809334:-1
so has part: feature:5809222-5809334:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5787199-5787252:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5684399-5684459:-1:exon

XP_038435234.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5809222-5809334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5787199-5787252:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5684399-5684459:-1:exon

ATP6V1H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit H isoform X1
translation: MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTVINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVGVETGTVSSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPILSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQTAAARS
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5684399..5684459,5721051..5721164,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5787199..5787252,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809334))
location: region:5684399-5809334:-1
so has part: feature:5809222-5809334:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5787199-5787252:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5721051-5721164:-1:exon
so has part: feature:5684399-5684459:-1:exon

XP_038435231.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5809222-5809334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5787199-5787252:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5721051-5721164:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5684399-5684459:-1:exon

ATP6V1H
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: ATP6V1H
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: V-type proton ATPase subunit H isoform X1
translation: MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTVINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAARIIAKLAAWGKELMEGSDLNYYFNWIKTQLSSQKLRGSGVGVETGTVSSSDSSQYVQCVAGCLQLMLRVNEYRFAWVEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPILSDILQESVKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISEDIKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLKILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRYNALLAVQKLMVHNWEYLGKQLQSEQPQTAAARS
SIO_010081: ATP6V1H
subclass of: SO_0000673
so part of: ATP6V1H
location: complement(join(5684399..5684459,5721051..5721164,5736942..5737043,5752520..5752645,5755311..5755489,5766966..5767158,5772378..5772475,5787199..5787252,5790549..5790653,5793729..5793842,5801019..5801108,5802068..5802170,5809222..5809334))
location: region:5684399-5809334:-1
so has part: feature:5809222-5809334:-1:exon
so has part: feature:5802068-5802170:-1:exon
so has part: feature:5801019-5801108:-1:exon
so has part: feature:5793729-5793842:-1:exon
so has part: feature:5790549-5790653:-1:exon
so has part: feature:5787199-5787252:-1:exon
so has part: feature:5772378-5772475:-1:exon
so has part: feature:5766966-5767158:-1:exon
so has part: feature:5755311-5755489:-1:exon
so has part: feature:5752520-5752645:-1:exon
so has part: feature:5736942-5737043:-1:exon
so has part: feature:5721051-5721164:-1:exon
so has part: feature:5684399-5684459:-1:exon

XP_038435232.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5809222-5809334:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5802068-5802170:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5801019-5801108:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5793729-5793842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5790549-5790653:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5787199-5787252:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5772378-5772475:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5766966-5767158:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5755311-5755489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5752520-5752645:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5736942-5737043:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5721051-5721164:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5684399-5684459:-1:exon

RGS20
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5823542..5907602
location: region:5823542-5907602:1
so has part: feature:5823542-5907602:1:exon
subclass of: SO_0000010

486954
type: Gene
SIO_000068: ncbigene

position:5823542:1
position: 5823542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5907602:1
position: 5907602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5823542-5907602:1:exon

RGS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RGS20
product: regulator of G protein signaling 20, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 16 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038579315.1
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5823542..5823979,5845250..5845258,5847049..5847363,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5907602)
location: region:5823542-5907602:1
so has part: feature:5823542-5823979:1:exon
so has part: feature:5845250-5845258:1:exon
so has part: feature:5847049-5847363:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5907602:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5823542-5823979:1:exon

position:5823979:1
position: 5823979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5845250-5845258:1:exon

position:5845250:1
position: 5845250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5845258:1
position: 5845258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5847049-5847363:1:exon

position:5847049:1
position: 5847049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5847363:1
position: 5847363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5886217-5886365:1:exon

position:5886217:1
position: 5886217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5886365:1
position: 5886365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5894837-5894920:1:exon

position:5894837:1
position: 5894837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5894920:1
position: 5894920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5900987-5901221:1:exon

position:5900987:1
position: 5900987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5901221:1
position: 5901221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5906630-5907602:1:exon

position:5906630:1
position: 5906630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RGS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20 isoform X3
translation: MPSLPQDNQECLQEHFSRPSMWKQFLPLRRAEGYKANIHQTMENEGSTKAVHDVKYFPPAQLPDSPAAPKPLSLLSGTLSGLARFFSHLLRRPPSGTPQRRPDFSLLLSVRSLPAARLSRGHGERPGRLSLLLGAALALPSRPPGGRAPREEDACAGQSSPVPPMGSERPEMRKRQMPAAQETAGSTPGQPGAGERGANACCFCWCCCCSCSCLTVRNQEQRPRRPSHELREEDLPSCEESPSPTLEEVNAWSQSFDKVMLTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKTIIEEKARTIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSALYKDLLQSLSEKSAEA
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5823815..5823979,5845250..5845258,5847049..5847363,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5906818)
location: region:5823815-5906818:1
so has part: feature:5823815-5823979:1:exon
so has part: feature:5845250-5845258:1:exon
so has part: feature:5847049-5847363:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906818:1:exon

XP_038435243.1
type: Protein
SIO_000068: ncbiprotein

position:5823815:1
position: 5823815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5906818:1
position: 5906818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5823815-5823979:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5845250-5845258:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5847049-5847363:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5886217-5886365:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5906630-5906818:1:exon

RGS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RGS20
product: regulator of G protein signaling 20, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038579311.1
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5847861..5848355,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5906858)
location: region:5847861-5906858:1
so has part: feature:5847861-5848355:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906858:1:exon

position:5847861:1
position: 5847861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5906858:1
position: 5906858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5847861-5848355:1:exon

position:5848355:1
position: 5848355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5886217-5886365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5906630-5906858:1:exon

RGS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RGS20
product: regulator of G protein signaling 20, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XM_038579312.1
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5848668..5848692,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5906858)
location: region:5848668-5906858:1
so has part: feature:5848668-5848692:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906858:1:exon

position:5848668:1
position: 5848668
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5848668-5848692:1:exon

position:5848692:1
position: 5848692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5886217-5886365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5906630-5906858:1:exon

RGS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RGS20
product: regulator of G protein signaling 20, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_038579310.1
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5848705..5848860,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5907602)
location: region:5848705-5907602:1
so has part: feature:5848705-5848860:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5907602:1:exon

position:5848705:1
position: 5848705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5848705-5848860:1:exon

position:5848860:1
position: 5848860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5886217-5886365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5906630-5907602:1:exon

RGS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20 isoform X1
translation: MRTADRGELARASPPARPADGEFPMGSERPEMRKRQMPAAQETAGSTPGQPGAGERGANACCFCWCCCCSCSCLTVRNQEQRPRRPSHELREEDLPSCEESPSPTLEEVNAWSQSFDKVMLTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKTIIEEKARTIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSALYKDLLQSLSEKSAEA
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5848792..5848860,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5906818)
location: region:5848792-5906818:1
so has part: feature:5848792-5848860:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906818:1:exon

XP_038435238.1
type: Protein
SIO_000068: ncbiprotein

position:5848792:1
position: 5848792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5848792-5848860:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5886217-5886365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5906630-5906818:1:exon

RGS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RGS20
product: regulator of G protein signaling 20, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XM_038579314.1
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5849050..5849454,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5906858)
location: region:5849050-5906858:1
so has part: feature:5849050-5849454:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906858:1:exon

position:5849050:1
position: 5849050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5849050-5849454:1:exon

position:5849454:1
position: 5849454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5886217-5886365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5906630-5906858:1:exon

RGS20
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RGS20
product: regulator of G protein signaling 20, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 13 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038579313.1
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5876644..5876685,5886217..5886365,5894837..5894920,5900987..5901221,5906630..5906858)
location: region:5876644-5906858:1
so has part: feature:5876644-5876685:1:exon
so has part: feature:5886217-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906858:1:exon

position:5876644:1
position: 5876644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5876644-5876685:1:exon

position:5876685:1
position: 5876685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5886217-5886365:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5906630-5906858:1:exon

RGS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20 isoform X2
translation: MGSERPEMRKRQMPAAQETAGSTPGQPGAGERGANACCFCWCCCCSCSCLTVRNQEQRPRRPSHELREEDLPSCEESPSPTLEEVNAWSQSFDKVMLTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKTIIEEKARTIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSALYKDLLQSLSEKSAEA
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5886220..5886365,5894837..5894920,5900987..5901221,5906630..5906818)
location: region:5886220-5906818:1
so has part: feature:5886220-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906818:1:exon

XP_038435239.1
type: Protein
SIO_000068: ncbiprotein

position:5886220:1
position: 5886220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5886220-5886365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5906630-5906818:1:exon

RGS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20 isoform X2
translation: MGSERPEMRKRQMPAAQETAGSTPGQPGAGERGANACCFCWCCCCSCSCLTVRNQEQRPRRPSHELREEDLPSCEESPSPTLEEVNAWSQSFDKVMLTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKTIIEEKARTIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSALYKDLLQSLSEKSAEA
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5886220..5886365,5894837..5894920,5900987..5901221,5906630..5906818)
location: region:5886220-5906818:1
so has part: feature:5886220-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906818:1:exon

XP_038435240.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5886220-5886365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5906630-5906818:1:exon

RGS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20 isoform X2
translation: MGSERPEMRKRQMPAAQETAGSTPGQPGAGERGANACCFCWCCCCSCSCLTVRNQEQRPRRPSHELREEDLPSCEESPSPTLEEVNAWSQSFDKVMLTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKTIIEEKARTIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSALYKDLLQSLSEKSAEA
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5886220..5886365,5894837..5894920,5900987..5901221,5906630..5906818)
location: region:5886220-5906818:1
so has part: feature:5886220-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906818:1:exon

XP_038435241.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5886220-5886365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5906630-5906818:1:exon

RGS20
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RGS20
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: regulator of G-protein signaling 20 isoform X2
translation: MGSERPEMRKRQMPAAQETAGSTPGQPGAGERGANACCFCWCCCCSCSCLTVRNQEQRPRRPSHELREEDLPSCEESPSPTLEEVNAWSQSFDKVMLTPAGRNAFREFLRTEFSEENMLFWMACEELKKEANKTIIEEKARTIYEDYISILSPKEVSLDSRVREVINRNMVEPSQHIFDDAQLQIYTLMHRDSYPRFMNSALYKDLLQSLSEKSAEA
SIO_010081: RGS20
subclass of: SO_0000673
so part of: RGS20
location: join(5886220..5886365,5894837..5894920,5900987..5901221,5906630..5906818)
location: region:5886220-5906818:1
so has part: feature:5886220-5886365:1:exon
so has part: feature:5894837-5894920:1:exon
so has part: feature:5900987-5901221:1:exon
so has part: feature:5906630-5906818:1:exon

XP_038435242.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5886220-5886365:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5894837-5894920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5900987-5901221:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5906630-5906818:1:exon

TCEA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5918533..5956917)
location: region:5918533-5956917:-1
so has part: feature:5918533-5956917:-1:exon
subclass of: SO_0000010

477879
type: Gene
SIO_000068: ncbigene

position:5918533:-1
position: 5918533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5956917:-1
position: 5956917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5918533-5956917:-1:exon

TCEA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TCEA1
product: transcription elongation factor A1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 ESTs, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 22 samples with support for all annotated introns
transcript id: XM_038579309.1
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5918533..5918623,5920370..5920441,5926952..5927098,5928394..5928548,5929529..5929585,5931270..5931415,5934731..5934818,5940515..5940620,5946551..5946613,5956280..5956917))
location: region:5918533-5956917:-1
so has part: feature:5956280-5956917:-1:exon
so has part: feature:5946551-5946613:-1:exon
so has part: feature:5940515-5940620:-1:exon
so has part: feature:5934731-5934818:-1:exon
so has part: feature:5931270-5931415:-1:exon
so has part: feature:5929529-5929585:-1:exon
so has part: feature:5928394-5928548:-1:exon
so has part: feature:5926952-5927098:-1:exon
so has part: feature:5920370-5920441:-1:exon
so has part: feature:5918533-5918623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5956280-5956917:-1:exon

position:5956280:-1
position: 5956280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5946551-5946613:-1:exon

position:5946551:-1
position: 5946551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5946613:-1
position: 5946613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5940515-5940620:-1:exon

position:5940515:-1
position: 5940515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5940620:-1
position: 5940620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5934731-5934818:-1:exon

position:5934731:-1
position: 5934731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5934818:-1
position: 5934818
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5931270-5931415:-1:exon

position:5931270:-1
position: 5931270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5931415:-1
position: 5931415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5929529-5929585:-1:exon

position:5929529:-1
position: 5929529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5929585:-1
position: 5929585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5928394-5928548:-1:exon

position:5928394:-1
position: 5928394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5928548:-1
position: 5928548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5926952-5927098:-1:exon

position:5926952:-1
position: 5926952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5927098:-1
position: 5927098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5920370-5920441:-1:exon

position:5920370:-1
position: 5920370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5920441:-1
position: 5920441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5918533-5918623:-1:exon

position:5918623:-1
position: 5918623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TCEA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TCEA1
product: transcription elongation factor A1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579308.1
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5918533..5918623,5920370..5920441,5926952..5927098,5928394..5928548,5929529..5929585,5931270..5931412,5934731..5934818,5940515..5940620,5946551..5946613,5956663..5956909))
location: region:5918533-5956909:-1
so has part: feature:5956663-5956909:-1:exon
so has part: feature:5946551-5946613:-1:exon
so has part: feature:5940515-5940620:-1:exon
so has part: feature:5934731-5934818:-1:exon
so has part: feature:5931270-5931412:-1:exon
so has part: feature:5929529-5929585:-1:exon
so has part: feature:5928394-5928548:-1:exon
so has part: feature:5926952-5927098:-1:exon
so has part: feature:5920370-5920441:-1:exon
so has part: feature:5918533-5918623:-1:exon

position:5956909:-1
position: 5956909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5956663-5956909:-1:exon

position:5956663:-1
position: 5956663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5946551-5946613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5940515-5940620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5934731-5934818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5931270-5931412:-1:exon

position:5931412:-1
position: 5931412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5929529-5929585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5928394-5928548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5926952-5927098:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5920370-5920441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5918533-5918623:-1:exon

TCEA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TCEA1
product: transcription elongation factor A1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579307.1
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5918533..5918623,5920370..5920441,5926952..5927098,5928394..5928548,5929529..5929585,5931270..5931415,5934731..5934818,5940515..5940620,5946551..5946613,5956663..5956909))
location: region:5918533-5956909:-1
so has part: feature:5956663-5956909:-1:exon
so has part: feature:5946551-5946613:-1:exon
so has part: feature:5940515-5940620:-1:exon
so has part: feature:5934731-5934818:-1:exon
so has part: feature:5931270-5931415:-1:exon
so has part: feature:5929529-5929585:-1:exon
so has part: feature:5928394-5928548:-1:exon
so has part: feature:5926952-5927098:-1:exon
so has part: feature:5920370-5920441:-1:exon
so has part: feature:5918533-5918623:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5956663-5956909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5946551-5946613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5940515-5940620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5934731-5934818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5931270-5931415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5929529-5929585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5928394-5928548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5926952-5927098:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5920370-5920441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5918533-5918623:-1:exon

TCEA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1 isoform X2
translation: MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAITSQNSPEAREESSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5918615..5918623,5920370..5920441,5926952..5927098,5928394..5928548,5929529..5929585,5931270..5931412,5934731..5934818,5940515..5940620,5946551..5946613,5956663..5956725))
location: region:5918615-5956725:-1
so has part: feature:5956663-5956725:-1:exon
so has part: feature:5946551-5946613:-1:exon
so has part: feature:5940515-5940620:-1:exon
so has part: feature:5934731-5934818:-1:exon
so has part: feature:5931270-5931412:-1:exon
so has part: feature:5929529-5929585:-1:exon
so has part: feature:5928394-5928548:-1:exon
so has part: feature:5926952-5927098:-1:exon
so has part: feature:5920370-5920441:-1:exon
so has part: feature:5918615-5918623:-1:exon

XP_038435236.1
type: Protein
SIO_000068: ncbiprotein

position:5918615:-1
position: 5918615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5956725:-1
position: 5956725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5956663-5956725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5946551-5946613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5940515-5940620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5934731-5934818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5931270-5931412:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5929529-5929585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5928394-5928548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5926952-5927098:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5920370-5920441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5918615-5918623:-1:exon

TCEA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1 isoform X1
translation: MEDEVVRIAKKMDKMVQKKNAAGALDLLKELKNIPMTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5918615..5918623,5920370..5920441,5926952..5927098,5928394..5928548,5929529..5929585,5931270..5931415,5934731..5934818,5940515..5940620,5946551..5946613,5956663..5956725))
location: region:5918615-5956725:-1
so has part: feature:5956663-5956725:-1:exon
so has part: feature:5946551-5946613:-1:exon
so has part: feature:5940515-5940620:-1:exon
so has part: feature:5934731-5934818:-1:exon
so has part: feature:5931270-5931415:-1:exon
so has part: feature:5929529-5929585:-1:exon
so has part: feature:5928394-5928548:-1:exon
so has part: feature:5926952-5927098:-1:exon
so has part: feature:5920370-5920441:-1:exon
so has part: feature:5918615-5918623:-1:exon

XP_038435235.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5956663-5956725:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5946551-5946613:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5940515-5940620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5934731-5934818:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5931270-5931415:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5929529-5929585:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5928394-5928548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5926952-5927098:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5920370-5920441:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5918615-5918623:-1:exon

TCEA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TCEA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription elongation factor A protein 1 isoform X3
translation: MTLELLQSTRIGMSVNAIRKQSTDEEVTSLAKSLIKSWKKLLDGPSTDKDPEEKKKDTAITSQNSPEAREESSSSGNVSSRKDETNARDTYVSSFPRAPSTSDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKFC
SIO_010081: TCEA1
subclass of: SO_0000673
so part of: TCEA1
location: complement(join(5918615..5918623,5920370..5920441,5926952..5927098,5928394..5928548,5929529..5929585,5931270..5931415,5934731..5934818,5940515..5940620,5946551..5946571))
location: region:5918615-5946571:-1
so has part: feature:5946551-5946571:-1:exon
so has part: feature:5940515-5940620:-1:exon
so has part: feature:5934731-5934818:-1:exon
so has part: feature:5931270-5931415:-1:exon
so has part: feature:5929529-5929585:-1:exon
so has part: feature:5928394-5928548:-1:exon
so has part: feature:5926952-5927098:-1:exon
so has part: feature:5920370-5920441:-1:exon
so has part: feature:5918615-5918623:-1:exon

XP_038435237.1
type: Protein
SIO_000068: ncbiprotein

position:5946571:-1
position: 5946571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5946551-5946571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5940515-5940620:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5934731-5934818:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5931270-5931415:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5929529-5929585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5928394-5928548:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5926952-5927098:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5920370-5920441:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5918615-5918623:-1:exon

LYPLA1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LYPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5957952..5999169)
location: region:5957952-5999169:-1
so has part: feature:5957952-5999169:-1:exon
subclass of: SO_0000010

609018
type: Gene
SIO_000068: ncbigene

position:5957952:-1
position: 5957952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5999169:-1
position: 5999169
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5957952-5999169:-1:exon

LYPLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LYPLA1
product: lysophospholipase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns
transcript id: XM_038579317.1
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5957952..5958116,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977229,5979355..5979420,5998013..5998044,5999012..5999105))
location: region:5957952-5999105:-1
so has part: feature:5999012-5999105:-1:exon
so has part: feature:5998013-5998044:-1:exon
so has part: feature:5979355-5979420:-1:exon
so has part: feature:5977182-5977229:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5957952-5958116:-1:exon

position:5999105:-1
position: 5999105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999012-5999105:-1:exon

position:5999012:-1
position: 5999012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5998013-5998044:-1:exon

position:5998013:-1
position: 5998013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5998044:-1
position: 5998044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5979355-5979420:-1:exon

position:5979355:-1
position: 5979355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5979420:-1
position: 5979420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5977182-5977229:-1:exon

position:5977182:-1
position: 5977182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5977229:-1
position: 5977229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5974953-5975023:-1:exon

position:5974953:-1
position: 5974953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5975023:-1
position: 5975023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5971625-5971698:-1:exon

position:5971625:-1
position: 5971625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5971698:-1
position: 5971698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5969109-5969210:-1:exon

position:5969109:-1
position: 5969109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5969210:-1
position: 5969210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5967283-5967459:-1:exon

position:5967283:-1
position: 5967283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5967459:-1
position: 5967459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5957952-5958116:-1:exon

position:5958116:-1
position: 5958116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LYPLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LYPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-protein thioesterase 1 isoform X2
translation: MCGNNMSVPLPATVPAIRKATAAVIFLHGLGDTGHGWAEAFVGIRSSHIKYICPHAPVMPITLNMNMAMPSWFDIFGLSPDSQEDEPGIKQAAENVKALIEQEVKNGIPSNRIVLGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRTSFPQGPISGVNRDISILQCHGDCDFLVPLTFASLTAEKLKTLVNPANVTFKTYEGMMHGSCQQM
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5958111..5958116,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977229,5979355..5979420,5998013..5998044,5999012..5999080))
location: region:5958111-5999080:-1
so has part: feature:5999012-5999080:-1:exon
so has part: feature:5998013-5998044:-1:exon
so has part: feature:5979355-5979420:-1:exon
so has part: feature:5977182-5977229:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5958111-5958116:-1:exon

XP_038435245.1
type: Protein
SIO_000068: ncbiprotein

position:5958111:-1
position: 5958111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5999080:-1
position: 5999080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999012-5999080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5998013-5998044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5979355-5979420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5977182-5977229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5974953-5975023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5971625-5971698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5969109-5969210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5967283-5967459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5958111-5958116:-1:exon

LYPLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LYPLA1
product: lysophospholipase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_038579318.1
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5962636..5964228,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977229,5998013..5998044,5999012..5999166))
location: region:5962636-5999166:-1
so has part: feature:5999012-5999166:-1:exon
so has part: feature:5998013-5998044:-1:exon
so has part: feature:5977182-5977229:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5962636-5964228:-1:exon

position:5962636:-1
position: 5962636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5999166:-1
position: 5999166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999012-5999166:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5998013-5998044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5977182-5977229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5974953-5975023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5971625-5971698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5969109-5969210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5967283-5967459:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5962636-5964228:-1:exon

position:5964228:-1
position: 5964228
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LYPLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LYPLA1
product: lysophospholipase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_038579319.1
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5962636..5964228,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977229,5979355..5979420,5998013..5998044,5998182..5998239,5999012..5999086))
location: region:5962636-5999086:-1
so has part: feature:5999012-5999086:-1:exon
so has part: feature:5998182-5998239:-1:exon
so has part: feature:5998013-5998044:-1:exon
so has part: feature:5979355-5979420:-1:exon
so has part: feature:5977182-5977229:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5962636-5964228:-1:exon

position:5999086:-1
position: 5999086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999012-5999086:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5998182-5998239:-1:exon

position:5998182:-1
position: 5998182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5998239:-1
position: 5998239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5998013-5998044:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5979355-5979420:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5977182-5977229:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5974953-5975023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5971625-5971698:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5969109-5969210:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5967283-5967459:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5962636-5964228:-1:exon

LYPLA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LYPLA1
product: lysophospholipase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579316.1
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5963937..5964228,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977229,5979355..5979420,5998013..5998044,5999012..5999169))
location: region:5963937-5999169:-1
so has part: feature:5999012-5999169:-1:exon
so has part: feature:5998013-5998044:-1:exon
so has part: feature:5979355-5979420:-1:exon
so has part: feature:5977182-5977229:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5963937-5964228:-1:exon

position:5963937:-1
position: 5963937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999012-5999169:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5998013-5998044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5979355-5979420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5977182-5977229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5974953-5975023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5971625-5971698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5969109-5969210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5967283-5967459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5963937-5964228:-1:exon

LYPLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LYPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-protein thioesterase 1 isoform X3
translation: MCGNNMSVPLPATVPAIRKATAAVIFLHGLGDTGPVMPITLNMNMAMPSWFDIFGLSPDSQEDEPGIKQAAENVKALIEQEVKNGIPSNRIVLGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRTSFPQGPISGVNRDISILQCHGDCDFLVPLTFASLTAEKLKTLVNPANVTFKTYEGMMHGSCQQEMMDIKHFIDRLLPPVD
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5964175..5964228,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977229,5998013..5998044,5999012..5999080))
location: region:5964175-5999080:-1
so has part: feature:5999012-5999080:-1:exon
so has part: feature:5998013-5998044:-1:exon
so has part: feature:5977182-5977229:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5964175-5964228:-1:exon

XP_038435246.1
type: Protein
SIO_000068: ncbiprotein

position:5964175:-1
position: 5964175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5999012-5999080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5998013-5998044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5977182-5977229:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5974953-5975023:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5971625-5971698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5969109-5969210:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5967283-5967459:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5964175-5964228:-1:exon

LYPLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LYPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-protein thioesterase 1 isoform X1
translation: MCGNNMSVPLPATVPAIRKATAAVIFLHGLGDTGHGWAEAFVGIRSSHIKYICPHAPVMPITLNMNMAMPSWFDIFGLSPDSQEDEPGIKQAAENVKALIEQEVKNGIPSNRIVLGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRTSFPQGPISGVNRDISILQCHGDCDFLVPLTFASLTAEKLKTLVNPANVTFKTYEGMMHGSCQQEMMDIKHFIDRLLPPVD
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5964175..5964228,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977229,5979355..5979420,5998013..5998044,5999012..5999080))
location: region:5964175-5999080:-1
so has part: feature:5999012-5999080:-1:exon
so has part: feature:5998013-5998044:-1:exon
so has part: feature:5979355-5979420:-1:exon
so has part: feature:5977182-5977229:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5964175-5964228:-1:exon

XP_038435244.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5999012-5999080:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5998013-5998044:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5979355-5979420:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5977182-5977229:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5974953-5975023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5971625-5971698:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5969109-5969210:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5967283-5967459:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5964175-5964228:-1:exon

LYPLA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LYPLA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acyl-protein thioesterase 1 isoform X4
translation: MPITLNMNMAMPSWFDIFGLSPDSQEDEPGIKQAAENVKALIEQEVKNGIPSNRIVLGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRTSFPQGPISGVNRDISILQCHGDCDFLVPLTFASLTAEKLKTLVNPANVTFKTYEGMMHGSCQQEMMDIKHFIDRLLPPVD
SIO_010081: LYPLA1
subclass of: SO_0000673
so part of: LYPLA1
location: complement(join(5964175..5964228,5967283..5967459,5969109..5969210,5971625..5971698,5974953..5975023,5977182..5977222))
location: region:5964175-5977222:-1
so has part: feature:5977182-5977222:-1:exon
so has part: feature:5974953-5975023:-1:exon
so has part: feature:5971625-5971698:-1:exon
so has part: feature:5969109-5969210:-1:exon
so has part: feature:5967283-5967459:-1:exon
so has part: feature:5964175-5964228:-1:exon

XP_038435247.1
type: Protein
SIO_000068: ncbiprotein

position:5977222:-1
position: 5977222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5977182-5977222:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5974953-5975023:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5971625-5971698:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5969109-5969210:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5967283-5967459:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5964175-5964228:-1:exon

LOC119866697
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5975957..5976292
location: region:5975957-5976292:1
so has part: feature:5975957-5976292:1:exon
subclass of: SO_0000010

119866697
type: Gene
SIO_000068: ncbigene

position:5975957:1
position: 5975957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5976292:1
position: 5976292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5975957-5976292:1:exon

LOC119866697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC119866697
product: ATP synthase subunit f, mitochondrial-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_038579321.1
SIO_010081: LOC119866697
subclass of: SO_0000673
so part of: LOC119866697
location: 5975957..5976292
location: region:5975957-5976292:1
so has part: feature:5975957-5976292:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5975957-5976292:1:exon

LOC119866697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC119866697
product: ATP synthase subunit f, mitochondrial-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_038579322.1
SIO_010081: LOC119866697
subclass of: SO_0000673
so part of: LOC119866697
location: join(5975957..5976077,5976192..5976220)
location: region:5975957-5976220:1
so has part: feature:5975957-5976077:1:exon
so has part: feature:5976192-5976220:1:exon

position:5976220:1
position: 5976220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5975957-5976077:1:exon

position:5976077:1
position: 5976077
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5976192-5976220:1:exon

position:5976192:1
position: 5976192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC119866697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC119866697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit f, mitochondrial-like isoform X1
translation: MASSVPMKEKKLMKVKLGELPGWMLMRDSTPKGTAGAFQRGYYQHYKYINVKKGGAAGISMVLAAYVLFNYCRSYKELKHEQLRKYH
SIO_010081: LOC119866697
subclass of: SO_0000673
so part of: LOC119866697
location: 5975957..5976220
location: region:5975957-5976220:1
so has part: feature:5975957-5976220:1:exon

XP_038435249.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5975957-5976220:1:exon

LOC119866697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC119866697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ATP synthase subunit f, mitochondrial-like isoform X2
translation: MASSVPMKEKKLMKVKLGELPGWMLMRDSTPKGTAGAFQREHEQLRKYH
SIO_010081: LOC119866697
subclass of: SO_0000673
so part of: LOC119866697
location: join(5975957..5976077,5976192..5976220)
location: region:5975957-5976220:1
so has part: feature:5975957-5976077:1:exon
so has part: feature:5976192-5976220:1:exon

XP_038435250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5975957-5976077:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5976192-5976220:1:exon

MRPL15
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: MRPL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6006201..6013221
location: region:6006201-6013221:1
so has part: feature:6006201-6013221:1:exon
subclass of: SO_0000010

100856693
type: Gene
SIO_000068: ncbigene

position:6006201:1
position: 6006201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6013221:1
position: 6013221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006201-6013221:1:exon

MRPL15
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: MRPL15
product: mitochondrial ribosomal protein L15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579323.1
SIO_010081: MRPL15
subclass of: SO_0000673
so part of: MRPL15
location: join(6006201..6006391,6007911..6008065,6008876..6009041,6012122..6012245,6012689..6013221)
location: region:6006201-6013221:1
so has part: feature:6006201-6006391:1:exon
so has part: feature:6007911-6008065:1:exon
so has part: feature:6008876-6009041:1:exon
so has part: feature:6012122-6012245:1:exon
so has part: feature:6012689-6013221:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6006201-6006391:1:exon

position:6006391:1
position: 6006391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6007911-6008065:1:exon

position:6007911:1
position: 6007911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6008065:1
position: 6008065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6008876-6009041:1:exon

position:6008876:1
position: 6008876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6009041:1
position: 6009041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6012122-6012245:1:exon

position:6012122:1
position: 6012122
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6012245:1
position: 6012245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6012689-6013221:1:exon

position:6012689:1
position: 6012689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MRPL15
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: MRPL15
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 39S ribosomal protein L15, mitochondrial
translation: MAGPVQAGGARTLDLLRALPRVSLANLKPNPGSRKPERRRRGRRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYIRIPKYGFNEGHSFRRQYQPLSLNRLQYLIDLGRVDPTQPIDLTQLVNGRGVTIQPLKRDYGVQLVEEGADTFKAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLEILCKPVPFFLRGQPIPKRMLPPEALVPYYTDAKNRGYLADPAKFPEARLELAKKYGYILPDITKDELFKMLSTRKDPRQIFFGLAPGWVVNMTDKKILKPTDENLLKYYSS
SIO_010081: MRPL15
subclass of: SO_0000673
so part of: MRPL15
location: join(6006284..6006391,6007911..6008065,6008876..6009041,6012122..6012245,6012689..6013026)
location: region:6006284-6013026:1
so has part: feature:6006284-6006391:1:exon
so has part: feature:6007911-6008065:1:exon
so has part: feature:6008876-6009041:1:exon
so has part: feature:6012122-6012245:1:exon
so has part: feature:6012689-6013026:1:exon

XP_038435251.1
type: Protein
SIO_000068: ncbiprotein

position:6006284:1
position: 6006284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6013026:1
position: 6013026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6006284-6006391:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6007911-6008065:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6008876-6009041:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6012122-6012245:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6012689-6013026:1:exon

LOC119866793
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866793
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6031243..6031349)
location: region:6031243-6031349:-1
so has part: feature:6031243-6031349:-1:exon
subclass of: SO_0000623

119866793
type: Gene
SIO_000068: ncbigene

position:6031243:-1
position: 6031243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6031349:-1
position: 6031349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6031243-6031349:-1:exon

LOC119866793
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: snRNA
gene: LOC119866793
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_005381304.1
SIO_010081: LOC119866793
subclass of: SO_0000673
so part of: LOC119866793
location: complement(6031243..6031349)
location: region:6031243-6031349:-1
so has part: feature:6031243-6031349:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6031243-6031349:-1:exon

SOX17
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: SOX17
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6377256..6379697
location: region:6377256-6379697:1
so has part: feature:6377256-6379697:1:exon
subclass of: SO_0000010

486955
type: Gene
SIO_000068: ncbigene

position:6377256:1
position: 6377256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6379697:1
position: 6379697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6377256-6379697:1:exon

SOX17
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: SOX17
product: SRY-box transcription factor 17
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_038579240.1
SIO_010081: SOX17
subclass of: SO_0000673
so part of: SOX17
location: join(6377256..6377734,6378352..6379697)
location: region:6377256-6379697:1
so has part: feature:6377256-6377734:1:exon
so has part: feature:6378352-6379697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6377256-6377734:1:exon

position:6377734:1
position: 6377734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6378352-6379697:1:exon

position:6378352:1
position: 6378352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SOX17
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: SOX17
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: transcription factor SOX-17
translation: MSSPDAGYASDDQSQTRSALPAVMAGLGPCPWAESLSPLGDMKVKGEAAASSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLGLAFPEQGFPAGPPLLPAHMGGHYRDCQGLGAAPLDGYPLPTPDTSPLDGVEPDPAFFAAPLPGDCPAAGPYSYPPASDYAGPPEPPVGPVHARLGLEQAGPALPGHVAPPGALQLYYNAMGSPAAGGGRGFSLQPQQHPPQHPPQHPPQHPPQHPPQHPQQPSPPPEALPCRDGADPSQPAELLGEVDRTEFEQYLHFVCKPEMGLPYQGHDSVVNLPDGHGPISSVVSDASSAVYYCNYPDV
SIO_010081: SOX17
subclass of: SO_0000673
so part of: SOX17
location: join(6377428..6377734,6378352..6379317)
location: region:6377428-6379317:1
so has part: feature:6377428-6377734:1:exon
so has part: feature:6378352-6379317:1:exon

XP_038435168.1
type: Protein
SIO_000068: ncbiprotein

position:6377428:1
position: 6377428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6379317:1
position: 6379317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6377428-6377734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6378352-6379317:1:exon

LOC119866698
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6490550..6524099)
location: region:6490550-6524099:-1
so has part: feature:6490550-6524099:-1:exon
subclass of: SO_0000011

119866698
type: Gene
SIO_000068: ncbigene

position:6490550:-1
position: 6490550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6524099:-1
position: 6524099
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6490550-6524099:-1:exon

LOC119866698
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119866698
product: uncharacterized LOC119866698, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005380957.1
SIO_010081: LOC119866698
subclass of: SO_0000673
so part of: LOC119866698
location: complement(join(6490550..6491205,6512176..6512241,6523949..6524099))
location: region:6490550-6524099:-1
so has part: feature:6523949-6524099:-1:exon
so has part: feature:6512176-6512241:-1:exon
so has part: feature:6490550-6491205:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6523949-6524099:-1:exon

position:6523949:-1
position: 6523949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6512176-6512241:-1:exon

position:6512176:-1
position: 6512176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6512241:-1
position: 6512241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6490550-6491205:-1:exon

position:6491205:-1
position: 6491205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119866698
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119866698
product: uncharacterized LOC119866698, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_005380958.1
SIO_010081: LOC119866698
subclass of: SO_0000673
so part of: LOC119866698
location: complement(join(6497926..6498082,6512176..6512241,6523949..6524099))
location: region:6497926-6524099:-1
so has part: feature:6523949-6524099:-1:exon
so has part: feature:6512176-6512241:-1:exon
so has part: feature:6497926-6498082:-1:exon

position:6497926:-1
position: 6497926
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6523949-6524099:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6512176-6512241:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6497926-6498082:-1:exon

position:6498082:-1
position: 6498082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: RP1
note: RP1 axonemal microtubule associated; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 6523726..6534052
location: region:6523726-6534052:1
so has part: feature:6523726-6534052:1:exon
subclass of: SO_0000010

403565
type: Gene
SIO_000068: ncbigene

position:6523726:1
position: 6523726
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6534052:1
position: 6534052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6523726-6534052:1:exon

RP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: RP1
product: RP1 axonemal microtubule associated
inference: similar to RNA sequence, mRNA (same species):RefSeq:NM_001003040.2
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001003040.2
SIO_010081: RP1
subclass of: SO_0000673
so part of: RP1
location: join(6523726..6524346,6525650..6525821,6528012..6534052)
location: region:6523726-6534052:1
so has part: feature:6523726-6524346:1:exon
so has part: feature:6525650-6525821:1:exon
so has part: feature:6528012-6534052:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6523726-6524346:1:exon

position:6524346:1
position: 6524346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6525650-6525821:1:exon

position:6525650:1
position: 6525650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6525821:1
position: 6525821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6528012-6534052:1:exon

position:6528012:1
position: 6528012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: RP1
inference: similar to AA sequence (same species):RefSeq:NP_001003040.2
exception: annotated by transcript or proteomic data
note: The RefSeq protein has 2 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: oxygen-regulated protein 1
translation: MSETSSTSVSMIHRSFEGQGPPRHLSVMHPVVAKKISFYKSGDPQFGGVKVVVNPRSFKTFDALLDNLSRKVPLPFGVRNISTPRGRHSITRLEELEDGASYLCSHRRKVQPVDLDKARRRPRPWLSSRAISAHAQRSPPTSIGAAGAPGMLRAPRRLLVFRNGDPKIRRVAIVNRRVTQSFQAFLQHLTEVMRFPVTKLYATDGRKVPSLQAVILSSGAVVAAGREPFKPGNYDIQKYLLSARLPGTSHHVYIKGNTRSESRKMSTHVPSSPRSQIYSVSSGKMHNNDCYSDHSFASENYLALEKNDSRNLLIYPSEDDIEKSIIFNQDGTMTVEMKVRFKIKEEETIKWTTVSRASLSHNNEKCEVGCFPGRTDDQSSHLKIAACSLSADVSSLEKDNNQEVSLTEEINTRITDQETETCTSVSWENGAMDTNTVQGTQDQAKHHFYRPPTPGPKRVRQKSVRGSVTLVSETEVEEEMIRQFSYSEAREDGENKSEYHMFTHSCSKMSSVSNKPLLVQINNNEQMESSLERKKESRLLKSGAIRAGVEITNQKMLEMSHNNGSPQTISENSIVGEVIVDSLTSDNKTNIKILRPYSRTRDRFSPILADTTHSLSNDSGIDKTVSEIPALVESSTVTTRIDRLINEFAQCDLTKFPANEKQTSLSVASKKKMKSQQQVINSRHQIRKIATKGILSKNKRINTGRRIAQEIILEGSDGSLKGGVVCEEDLHVSDTVIESNYCSQSDLNPVNSKNFHVNKLNTLQNPKKFQGLLAKRKSRPLTKVSLGGPTKREIGQGDKVFPHNDFRYCKNNFEDQNLFPMFNFLEQRPSDFCGPQGQAEIASWYLGGITKKNLVSKVNNSHITLKTQKKQKGDKLKSSTTVSKQQVTTRANSLGSLKKAVFPEAISHHSVQNYIQRWLQNTNPHSALQSRKSAPIYKKDRSVVSCNNNGFAGTKSHTSSGEGNNFARESNKYITKNASLTENLGKKVGKFFDKVNSEELSKDLCENQVESLNDACLLPLHENCALSQSAIDDHNTKIQVCAEKLGPEISLVYQEINVATKRHSVEAAIQVDLTEEDTSKDPLPILLLRQLQALVPSIHKTQNGITQMPGSLADIPFSSPICKSYTNVLLAWLLVLTLKGSINSFCQGDAHKTTNRASEILGLLEVLRHTAITEEADDLKAAVANLVESTTNHFGLTEKEQDMVPVGLSANCSTPNLHRVPKCVENEKTQKISSGGGHSASEHCGPEACVSELTCSCQMCIVNKTCPPKETCNLSDIFCPSDGCTVDQTPMNKACFQGEVCSLTDALSSHRACAHEENHSRKATCPIDEAYIPNKICNTSDFLIFKENTCTDNLELTEELERINKVQKDLNVLADPGCKHSFNILVSDQNISNLSYSSFPINETEPEFDKERSSVAELKNYSLKTFQGKNAYTSSDKEDSKTSEEPGSITNSMTSSERNISELESFEELENQDTDTFHMKVNAREQAAEELIQKELEASKNLQLIDGSRRNITEEEERNGIICEAIRRRLATPPSLVFCYDSKQNTEKDLNEGETKMRVKMMVKSVEIGSYSESSLDFKNDFIGPVTSDWSEFRPSSENEQPYKTSSDGPNGSCEEIVQDKDYNKGFVKRTIEKLYSKGEIIKPSFFSGSIHRSQVCPYNSVEFQCARKVDLYDSEGQSFGSSEQLSSNSSMLQKFLEEGQDKCDFNDVRANYHGGDILGHGTKQNDHNRIIRDIEEGVLIDKGKWLLKENHLLRISSPENSGLYGNADTISVDTLLNNDNEVPYSHFGNLAPDPTMAELSSSELEELSQPLELKCSYFNMPHCSDSEPFCEDLLDVQNKTCARERIPVHHAEEKANHKSERVCTSVTHGFTSAGNKVHPVSDDTIKNQPLPVNNAIHGALQEGDSLDKLYAICGQHCPILTVIIQPINEEDRGFAYCKNSDIENFLGLHLWMKVHPYLLPSNKTIFRDANNKANGRKAFIDNAFDDTFDLMDKRKLRNL…
SIO_010081: RP1
subclass of: SO_0000673
so part of: RP1
location: join(6523726..6524346,6525650..6525821,6528012..6533644)
location: region:6523726-6533644:1
so has part: feature:6523726-6524346:1:exon
so has part: feature:6525650-6525821:1:exon
so has part: feature:6528012-6533644:1:exon

NP_001003040.2
type: Protein
SIO_000068: ncbiprotein

position:6533644:1
position: 6533644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6523726-6524346:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6525650-6525821:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6528012-6533644:1:exon

LOC102156503
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102156503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6565885..6672703
location: region:6565885-6672703:1
so has part: feature:6565885-6672703:1:exon
subclass of: SO_0000010

102156503
type: Gene
SIO_000068: ncbigene

position:6565885:1
position: 6565885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6672703:1
position: 6672703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6565885-6672703:1:exon

LOC102156503
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LOC102156503
product: lipoxygenase homology domain-containing protein 1-like, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XM_038579324.1
SIO_010081: LOC102156503
subclass of: SO_0000673
so part of: LOC102156503
location: join(6565885..6566020,6576880..6576966,6579935..6580067,6588382..6588533,6594151..6594229,6625145..6625220,6626076..6626152,6626259..6626290,6626442..6626571,6638957..6639060,6642127..6642303,6645097..6645309,6660036..6660213,6670886..6670995,6671886..6672703)
location: region:6565885-6672703:1
so has part: feature:6565885-6566020:1:exon
so has part: feature:6576880-6576966:1:exon
so has part: feature:6579935-6580067:1:exon
so has part: feature:6588382-6588533:1:exon
so has part: feature:6594151-6594229:1:exon
so has part: feature:6625145-6625220:1:exon
so has part: feature:6626076-6626152:1:exon
so has part: feature:6626259-6626290:1:exon
so has part: feature:6626442-6626571:1:exon
so has part: feature:6638957-6639060:1:exon
so has part: feature:6642127-6642303:1:exon
so has part: feature:6645097-6645309:1:exon
so has part: feature:6660036-6660213:1:exon
so has part: feature:6670886-6670995:1:exon
so has part: feature:6671886-6672703:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6565885-6566020:1:exon

position:6566020:1
position: 6566020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6576880-6576966:1:exon

position:6576880:1
position: 6576880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6576966:1
position: 6576966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6579935-6580067:1:exon

position:6579935:1
position: 6579935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6580067:1
position: 6580067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6588382-6588533:1:exon

position:6588382:1
position: 6588382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6588533:1
position: 6588533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6594151-6594229:1:exon

position:6594151:1
position: 6594151
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6594229:1
position: 6594229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6625145-6625220:1:exon

position:6625145:1
position: 6625145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6625220:1
position: 6625220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6626076-6626152:1:exon

position:6626076:1
position: 6626076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6626152:1
position: 6626152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6626259-6626290:1:exon

position:6626259:1
position: 6626259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6626290:1
position: 6626290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6626442-6626571:1:exon

position:6626442:1
position: 6626442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6626571:1
position: 6626571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:6638957-6639060:1:exon

position:6638957:1
position: 6638957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6639060:1
position: 6639060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:6642127-6642303:1:exon

position:6642127:1
position: 6642127
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6642303:1
position: 6642303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:6645097-6645309:1:exon

position:6645097:1
position: 6645097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6645309:1
position: 6645309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:6660036-6660213:1:exon

position:6660036:1
position: 6660036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6660213:1
position: 6660213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:6670886-6670995:1:exon

position:6670886:1
position: 6670886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6670995:1
position: 6670995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:6671886-6672703:1:exon

position:6671886:1
position: 6671886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102156425
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102156425
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 6569530..6570509
location: region:6569530-6570509:1
so has part: feature:6569530-6570509:1:exon

102156425
type: Gene
SIO_000068: ncbigene

position:6569530:1
position: 6569530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6570509:1
position: 6570509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6569530-6570509:1:exon

LOC102156425
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC102156425
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC102156425
subclass of: SO_0000673
so part of: LOC102156425
location: 6569530..6570509
location: region:6569530-6570509:1
so has part: feature:6569530-6570509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6569530-6570509:1:exon

LOC102156503
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: LOC102156503
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC102156503 isoform X5
translation: MVGDIGALFKIRIGHTNSGPSPSWHCKEIQLWNMNSRKKFYIPVQRWLAKDQEDGEICREFPVLNEGQPLLPVTLYEVHVATGMLWNAGTIASVYISVYGEKGDSGSRQLFRSKNSFNFLRGQTDTFTLEAVHLGDLYKIVVGHDGIGPGNGWFLDDVVIKDPTTNHEYNFFCHRWLDQGEDDGKIVRELYARDNSIVFAKQKLELNRKETWAAERWKFMKGNTLQFYNRVTGGFVRLHPDGTVDAVGDKTDKYGLFDVIFNKGNICIFQSREMRHLSLAVDNSTVSGMASGGDCTELRVLYQPNRCALLESALVPGHIVTFDRHGKVADESSAGYADLSKEFVVFVKGVFLNSAEILLATSLCQALCLQPDGSCTGVGSQSEKSYWKVHKISSGICMFESVKNAGMYLRIKDGQCDGTGIGDTDCHFKIKKNLENASISLESIKSPGLFVGLQPDGQTKPIIYTKNGNVFFYPQVIKFGRENPMGMSATPSQQEEKKSMSQKTSKKLY
SIO_010081: LOC102156503
subclass of: SO_0000673
so part of: LOC102156503
location: join(6576883..6576966,6579935..6580067,6588382..6588533,6594151..6594229,6625145..6625220,6626076..6626152,6626259..6626290,6626442..6626571,6638957..6639060,6642127..6642303,6645097..6645309,6660036..6660213,6670886..6670980)
location: region:6576883-6670980:1
so has part: feature:6576883-6576966:1:exon
so has part: feature:6579935-6580067:1:exon
so has part: feature:6588382-6588533:1:exon
so has part: feature:6594151-6594229:1:exon
so has part: feature:6625145-6625220:1:exon
so has part: feature:6626076-6626152:1:exon
so has part: feature:6626259-6626290:1:exon
so has part: feature:6626442-6626571:1:exon
so has part: feature:6638957-6639060:1:exon
so has part: feature:6642127-6642303:1:exon
so has part: feature:6645097-6645309:1:exon
so has part: feature:6660036-6660213:1:exon
so has part: feature:6670886-6670980:1:exon

XP_038435252.1
type: Protein
SIO_000068: ncbiprotein

position:6576883:1
position: 6576883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6670980:1
position: 6670980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6576883-6576966:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6579935-6580067:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6588382-6588533:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6594151-6594229:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6625145-6625220:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6626076-6626152:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6626259-6626290:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6626442-6626571:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6638957-6639060:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:6642127-6642303:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:6645097-6645309:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:6660036-6660213:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:6670886-6670980:1:exon

LOC119877715
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119877715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6895279..6911676)
location: region:6895279-6911676:-1
so has part: feature:6895279-6911676:-1:exon
subclass of: SO_0000011

119877715
type: Gene
SIO_000068: ncbigene

position:6895279:-1
position: 6895279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6911676:-1
position: 6911676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6895279-6911676:-1:exon

LOC119877715
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119877715
product: uncharacterized LOC119877715, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380959.1
SIO_010081: LOC119877715
subclass of: SO_0000673
so part of: LOC119877715
location: complement(join(6895279..6895313,6909308..6909476,6911269..6911676))
location: region:6895279-6911676:-1
so has part: feature:6911269-6911676:-1:exon
so has part: feature:6909308-6909476:-1:exon
so has part: feature:6895279-6895313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6911269-6911676:-1:exon

position:6911269:-1
position: 6911269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6909308-6909476:-1:exon

position:6909308:-1
position: 6909308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6909476:-1
position: 6909476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6895279-6895313:-1:exon

position:6895313:-1
position: 6895313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC119877715
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119877715
product: uncharacterized LOC119877715, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380960.1
SIO_010081: LOC119877715
subclass of: SO_0000673
so part of: LOC119877715
location: complement(join(6895279..6895313,6909308..6909476,6911249..6911676))
location: region:6895279-6911676:-1
so has part: feature:6911249-6911676:-1:exon
so has part: feature:6909308-6909476:-1:exon
so has part: feature:6895279-6895313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6911249-6911676:-1:exon

position:6911249:-1
position: 6911249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6909308-6909476:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6895279-6895313:-1:exon

LOC111093240
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093240
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6989839..7006879)
location: region:6989839-7006879:-1
so has part: feature:6989839-7006879:-1:exon
subclass of: SO_0000011

111093240
type: Gene
SIO_000068: ncbigene

position:6989839:-1
position: 6989839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7006879:-1
position: 7006879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6989839-7006879:-1:exon

LOC111093240
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093240
product: uncharacterized LOC111093240, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_005380841.1
SIO_010081: LOC111093240
subclass of: SO_0000673
so part of: LOC111093240
location: complement(join(6989839..6990503,7004511..7004679,7006472..7006879))
location: region:6989839-7006879:-1
so has part: feature:7006472-7006879:-1:exon
so has part: feature:7004511-7004679:-1:exon
so has part: feature:6989839-6990503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7006472-7006879:-1:exon

position:7006472:-1
position: 7006472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7004511-7004679:-1:exon

position:7004511:-1
position: 7004511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7004679:-1
position: 7004679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6989839-6990503:-1:exon

position:6990503:-1
position: 6990503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC111093240
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093240
product: uncharacterized LOC111093240, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_005380842.1
SIO_010081: LOC111093240
subclass of: SO_0000673
so part of: LOC111093240
location: complement(join(6989839..6990503,7004511..7004679,7006452..7006879))
location: region:6989839-7006879:-1
so has part: feature:7006452-7006879:-1:exon
so has part: feature:7004511-7004679:-1:exon
so has part: feature:6989839-6990503:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7006452-7006879:-1:exon

position:7006452:-1
position: 7006452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7004511-7004679:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6989839-6990503:-1:exon

LOC119866810
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866810
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(7009081..7009147)
location: region:7009081-7009147:-1
so has part: feature:7009081-7009147:-1:exon

119866810
type: Gene
SIO_000068: ncbigene

position:7009081:-1
position: 7009081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7009147:-1
position: 7009147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7009081-7009147:-1:exon

LOC119866810
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC119866810
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00105
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC119866810
subclass of: SO_0000673
so part of: LOC119866810
location: complement(7009081..7009147)
location: region:7009081-7009147:-1
so has part: feature:7009081-7009147:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7009081-7009147:-1:exon

XKR4
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: XKR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7138740..7581032
location: region:7138740-7581032:1
so has part: feature:7138740-7581032:1:exon
subclass of: SO_0000010

609128
type: Gene
SIO_000068: ncbigene

position:7138740:1
position: 7138740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7581032:1
position: 7581032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7138740-7581032:1:exon

XKR4
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: XKR4
product: XK related 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 3 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 4 samples with support for all annotated introns
transcript id: XR_005380961.1
SIO_010081: XKR4
so part of: XKR4
location: join(7138740..7139641,7408330..7408529,7563079..7565193,7573187..7581032)
location: region:7138740-7581032:1
so has part: feature:7138740-7139641:1:exon
so has part: feature:7408330-7408529:1:exon
so has part: feature:7563079-7565193:1:exon
so has part: feature:7573187-7581032:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7138740-7139641:1:exon

position:7139641:1
position: 7139641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7408330-7408529:1:exon

position:7408330:1
position: 7408330
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7408529:1
position: 7408529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7563079-7565193:1:exon

position:7563079:1
position: 7563079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7565193:1
position: 7565193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7573187-7581032:1:exon

position:7573187:1
position: 7573187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

XKR4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: XKR4
product: XK related 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_038579326.1
SIO_010081: XKR4
subclass of: SO_0000673
so part of: XKR4
location: join(7138740..7139641,7408330..7408529,7563079..7567344)
location: region:7138740-7567344:1
so has part: feature:7138740-7139641:1:exon
so has part: feature:7408330-7408529:1:exon
so has part: feature:7563079-7567344:1:exon

position:7567344:1
position: 7567344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7138740-7139641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7408330-7408529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7563079-7567344:1:exon

XKR4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: XKR4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: XK-related protein 4
translation: MAAKSDGRLKMKKGSDVAFTPLQNSDLSGSVQGLAPGLPSGSGAEDEEAAGGGCCPDGGGCSRCCCCCAGSGGSGGGSGGGSGGGSGVSGGPGGPGGGGAGSAALCLRLGRERRRYSLWDCLWILAAVAVYFADVGTDIWLAVDYYLRGQRWWFGLTLFFVVLGSLSVQVFSFRWFVHDFSTEDSAPAAAASSCPQPGADCKTAAGGGSAAAEGEARPSTPQRQASNASKSNIAAANSGSNSSGATRASGQRRSASCSFCIWLLQSLIHILQLGQIWRYFHTIYLGIRSRQSGENDRWRFYWKMVYEYADVSMLHLLATFLESAPQLVLQLCIIVQTHRLQALQGFTAAASLVSLAWALASYQKALRDSRDDKKPISYMAVVIQFCWHFFTIAARVITFALFASVFQLYFGIFIVLHWCIMTFWIVHCETEFCITKWEEIVFDMVVGIIYIFSWFNVKEGRTRCRLFIYYFVILLENTALSALWYLYKAPPFADAFAIPALCVVFSSFLTGVVFMLMYYAFFHPNGPRFGQSPSCACEDPVAAFTLPPEVATSTLRSISNNRSVASDRDQKFVERDGCVPVFQVRPTAPSTPSSRLPRIEESVIKIDLFRNRYPAWERHVLDRSLRKAILAFECSPSPPRLQYKDDALIQERLEYETTL
SIO_010081: XKR4
subclass of: SO_0000673
so part of: XKR4
location: join(7138809..7139641,7408330..7408529,7563079..7564025)
location: region:7138809-7564025:1
so has part: feature:7138809-7139641:1:exon
so has part: feature:7408330-7408529:1:exon
so has part: feature:7563079-7564025:1:exon

XP_038435254.1
type: Protein
SIO_000068: ncbiprotein

position:7138809:1
position: 7138809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7564025:1
position: 7564025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7138809-7139641:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7408330-7408529:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7563079-7564025:1:exon

LOC477883
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC477883
note: L-lactate dehydrogenase B chain pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(7516296..7517554)
location: region:7516296-7517554:-1
so has part: feature:7516296-7517554:-1:exon

477883
type: Gene
SIO_000068: ncbigene

position:7516296:-1
position: 7516296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7517554:-1
position: 7517554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7516296-7517554:-1:exon

LOC477883
type: Exon
subclass of: SO_0000147
RO_0002162: 9615
gene: LOC477883
note: Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
SIO_010081: LOC477883
subclass of: SO_0000673
so part of: LOC477883
location: complement(7516296..7517554)
location: region:7516296-7517554:-1
so has part: feature:7516296-7517554:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7516296-7517554:-1:exon

LOC119866699
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7594741..7607407)
location: region:7594741-7607407:-1
so has part: feature:7594741-7607407:-1:exon
subclass of: SO_0000011

119866699
type: Gene
SIO_000068: ncbigene

position:7594741:-1
position: 7594741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7607407:-1
position: 7607407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7594741-7607407:-1:exon

LOC119866699
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119866699
product: uncharacterized LOC119866699
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380964.1
SIO_010081: LOC119866699
subclass of: SO_0000673
so part of: LOC119866699
location: complement(join(7594741..7594865,7603349..7603392,7606413..7607407))
location: region:7594741-7607407:-1
so has part: feature:7606413-7607407:-1:exon
so has part: feature:7603349-7603392:-1:exon
so has part: feature:7594741-7594865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7606413-7607407:-1:exon

position:7606413:-1
position: 7606413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7603349-7603392:-1:exon

position:7603349:-1
position: 7603349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7603392:-1
position: 7603392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7594741-7594865:-1:exon

position:7594865:-1
position: 7594865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC102156572
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC102156572
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7606838..7642806
location: region:7606838-7642806:1
so has part: feature:7606838-7642806:1:exon
subclass of: SO_0000011

102156572
type: Gene
SIO_000068: ncbigene

position:7606838:1
position: 7606838
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7642806:1
position: 7642806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7606838-7642806:1:exon

LOC102156572
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC102156572
product: uncharacterized LOC102156572, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_005380962.1
SIO_010081: LOC102156572
subclass of: SO_0000673
so part of: LOC102156572
location: join(7606838..7607248,7624978..7625116,7642525..7642806)
location: region:7606838-7642806:1
so has part: feature:7606838-7607248:1:exon
so has part: feature:7624978-7625116:1:exon
so has part: feature:7642525-7642806:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7606838-7607248:1:exon

position:7607248:1
position: 7607248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7624978-7625116:1:exon

position:7624978:1
position: 7624978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7625116:1
position: 7625116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7642525-7642806:1:exon

position:7642525:1
position: 7642525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC111093172
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC111093172
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7641324..7652445)
location: region:7641324-7652445:-1
so has part: feature:7641324-7652445:-1:exon
subclass of: SO_0000011

111093172
type: Gene
SIO_000068: ncbigene

position:7641324:-1
position: 7641324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7652445:-1
position: 7652445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7641324-7652445:-1:exon

LOC111093172
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC111093172
product: uncharacterized LOC111093172
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_005380963.1
SIO_010081: LOC111093172
subclass of: SO_0000673
so part of: LOC111093172
location: complement(join(7641324..7642087,7642268..7642319,7643233..7643327,7645324..7645466,7646523..7646636,7651668..7652445))
location: region:7641324-7652445:-1
so has part: feature:7651668-7652445:-1:exon
so has part: feature:7646523-7646636:-1:exon
so has part: feature:7645324-7645466:-1:exon
so has part: feature:7643233-7643327:-1:exon
so has part: feature:7642268-7642319:-1:exon
so has part: feature:7641324-7642087:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7651668-7652445:-1:exon

position:7651668:-1
position: 7651668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7646523-7646636:-1:exon

position:7646523:-1
position: 7646523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7646636:-1
position: 7646636
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7645324-7645466:-1:exon

position:7645324:-1
position: 7645324
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7645466:-1
position: 7645466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7643233-7643327:-1:exon

position:7643233:-1
position: 7643233
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7643327:-1
position: 7643327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7642268-7642319:-1:exon

position:7642268:-1
position: 7642268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7642319:-1
position: 7642319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7641324-7642087:-1:exon

position:7642087:-1
position: 7642087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM68
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7690072..7738304)
location: region:7690072-7738304:-1
so has part: feature:7690072-7738304:-1:exon
subclass of: SO_0000010

486958
type: Gene
SIO_000068: ncbigene

position:7690072:-1
position: 7690072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7738304:-1
position: 7738304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7690072-7738304:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM68
product: transmembrane protein 68, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579331.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7690072..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728556,7729345..7729389,7738150..7738304))
location: region:7690072-7738304:-1
so has part: feature:7738150-7738304:-1:exon
so has part: feature:7729345-7729389:-1:exon
so has part: feature:7728163-7728556:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7690072-7691459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7738150-7738304:-1:exon

position:7738150:-1
position: 7738150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7729345-7729389:-1:exon

position:7729345:-1
position: 7729345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7729389:-1
position: 7729389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7728163-7728556:-1:exon

position:7728163:-1
position: 7728163
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7728556:-1
position: 7728556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7712980-7713147:-1:exon

position:7712980:-1
position: 7712980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7713147:-1
position: 7713147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7709691-7709884:-1:exon

position:7709691:-1
position: 7709691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7709884:-1
position: 7709884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7704551-7704611:-1:exon

position:7704551:-1
position: 7704551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7704611:-1
position: 7704611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7702780-7702919:-1:exon

position:7702780:-1
position: 7702780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7702919:-1
position: 7702919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7690072-7691459:-1:exon

position:7691459:-1
position: 7691459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM68
product: transmembrane protein 68, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_038579335.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7690072..7691459,7709691..7709884,7712980..7713147,7728163..7728556,7729345..7729389,7738105..7738296))
location: region:7690072-7738296:-1
so has part: feature:7738105-7738296:-1:exon
so has part: feature:7729345-7729389:-1:exon
so has part: feature:7728163-7728556:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7690072-7691459:-1:exon

position:7738296:-1
position: 7738296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738105-7738296:-1:exon

position:7738105:-1
position: 7738105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7729345-7729389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7728163-7728556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7690072-7691459:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM68
product: transmembrane protein 68, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 24 samples with support for all annotated introns
transcript id: XM_038579333.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7690072..7691459,7696646..7696683,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728556,7729345..7729389,7738105..7738295))
location: region:7690072-7738295:-1
so has part: feature:7738105-7738295:-1:exon
so has part: feature:7729345-7729389:-1:exon
so has part: feature:7728163-7728556:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7696646-7696683:-1:exon
so has part: feature:7690072-7691459:-1:exon

position:7738295:-1
position: 7738295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738105-7738295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7729345-7729389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7728163-7728556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7696646-7696683:-1:exon

position:7696646:-1
position: 7696646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7696683:-1
position: 7696683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7690072-7691459:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM68
product: transmembrane protein 68, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 35 samples with support for all annotated introns
transcript id: XM_038579330.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7690072..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728556,7729345..7729389,7738105..7738294))
location: region:7690072-7738294:-1
so has part: feature:7738105-7738294:-1:exon
so has part: feature:7729345-7729389:-1:exon
so has part: feature:7728163-7728556:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7690072-7691459:-1:exon

position:7738294:-1
position: 7738294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738105-7738294:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7729345-7729389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7728163-7728556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7690072-7691459:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM68
product: transmembrane protein 68, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 25 samples with support for all annotated introns
transcript id: XM_038579332.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7690072..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728556,7729345..7729389,7737430..7737773))
location: region:7690072-7737773:-1
so has part: feature:7737430-7737773:-1:exon
so has part: feature:7729345-7729389:-1:exon
so has part: feature:7728163-7728556:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7690072-7691459:-1:exon

position:7737773:-1
position: 7737773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7737430-7737773:-1:exon

position:7737430:-1
position: 7737430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7729345-7729389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7728163-7728556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7690072-7691459:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM68
product: transmembrane protein 68, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns
transcript id: XM_038579336.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7690072..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7710216..7710368,7712980..7713117))
location: region:7690072-7713117:-1
so has part: feature:7712980-7713117:-1:exon
so has part: feature:7710216-7710368:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7690072-7691459:-1:exon

position:7713117:-1
position: 7713117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7712980-7713117:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7710216-7710368:-1:exon

position:7710216:-1
position: 7710216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7710368:-1
position: 7710368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7690072-7691459:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X4
translation: MIDKNQTCGTGQDSMPYMTCLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVTKNAVQALIDKHQRIPGNIMSALLERFHKKQKIN
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7691355..7691459,7709691..7709884,7712980..7713147,7728163..7728487))
location: region:7691355-7728487:-1
so has part: feature:7728163-7728487:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7691355-7691459:-1:exon

XP_038435263.1
type: Protein
SIO_000068: ncbiprotein

position:7691355:-1
position: 7691355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7728487:-1
position: 7728487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7728163-7728487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7691355-7691459:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X1
translation: MIDKNQTCGTGQDSMPYMTCLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHKKQKIN
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7691355..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728487))
location: region:7691355-7728487:-1
so has part: feature:7728163-7728487:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7691355-7691459:-1:exon

XP_038435258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7728163-7728487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7691355-7691459:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X1
translation: MIDKNQTCGTGQDSMPYMTCLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHKKQKIN
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7691355..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728487))
location: region:7691355-7728487:-1
so has part: feature:7728163-7728487:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7691355-7691459:-1:exon

XP_038435259.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7728163-7728487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7691355-7691459:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X1
translation: MIDKNQTCGTGQDSMPYMTCLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHKKQKIN
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7691355..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728487))
location: region:7691355-7728487:-1
so has part: feature:7728163-7728487:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7691355-7691459:-1:exon

XP_038435260.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7728163-7728487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7691355-7691459:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X5
translation: MRCSGRSFGLDIPGLESLPCHLLGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFHKKQKIN
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7691355..7691459,7702780..7702919,7704551..7704611,7709691..7709884,7710216..7710285))
location: region:7691355-7710285:-1
so has part: feature:7710216-7710285:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7691355-7691459:-1:exon

XP_038435264.1
type: Protein
SIO_000068: ncbiprotein

position:7710285:-1
position: 7710285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7710216-7710285:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7691355-7691459:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X2
translation: MIDKNQTCGTGQDSMPYMTCLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGDPIPYDPKITAEELAEKGFYV
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7696669..7696683,7702780..7702919,7704551..7704611,7709691..7709884,7712980..7713147,7728163..7728487))
location: region:7696669-7728487:-1
so has part: feature:7728163-7728487:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702780-7702919:-1:exon
so has part: feature:7696669-7696683:-1:exon

XP_038435261.1
type: Protein
SIO_000068: ncbiprotein

position:7696669:-1
position: 7696669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7728163-7728487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7702780-7702919:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7696669-7696683:-1:exon

TMEM68
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TMEM68
product: transmembrane protein 68, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_038579334.1
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7702783..7702919,7704551..7704611,7707539..7707671,7709691..7709884,7712980..7713147,7728163..7728556,7729345..7729389,7738105..7738296))
location: region:7702783-7738296:-1
so has part: feature:7738105-7738296:-1:exon
so has part: feature:7729345-7729389:-1:exon
so has part: feature:7728163-7728556:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7707539-7707671:-1:exon
so has part: feature:7704551-7704611:-1:exon
so has part: feature:7702783-7702919:-1:exon

position:7702783:-1
position: 7702783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738105-7738296:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7729345-7729389:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7728163-7728556:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7707539-7707671:-1:exon

position:7707539:-1
position: 7707539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7707671:-1
position: 7707671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7704551-7704611:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7702783-7702919:-1:exon

TMEM68
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TMEM68
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 68 isoform X3
translation: MIDKNQTCGTGQDSMPYMTCLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIFLHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEEGPALIIFYHGAIPIDFYYFMAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETYNIIWGNRKGFAQVAIDAKVMRKLRHREMKGWRDQVIQQGRSRAKHTVQDCRQPVLLPPLTAFHTHYSYVYTKYSRRI
SIO_010081: TMEM68
subclass of: SO_0000673
so part of: TMEM68
location: complement(join(7704568..7704611,7707539..7707671,7709691..7709884,7712980..7713147,7728163..7728487))
location: region:7704568-7728487:-1
so has part: feature:7728163-7728487:-1:exon
so has part: feature:7712980-7713147:-1:exon
so has part: feature:7709691-7709884:-1:exon
so has part: feature:7707539-7707671:-1:exon
so has part: feature:7704568-7704611:-1:exon

XP_038435262.1
type: Protein
SIO_000068: ncbiprotein

position:7704568:-1
position: 7704568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7728163-7728487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7712980-7713147:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7709691-7709884:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7707539-7707671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7704568-7704611:-1:exon

TGS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: TGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7738103..7779317
location: region:7738103-7779317:1
so has part: feature:7738103-7779317:1:exon
subclass of: SO_0000010

477885
type: Gene
SIO_000068: ncbigene

position:7738103:1
position: 7738103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7779317:1
position: 7779317
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738103-7779317:1:exon

TGS1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9615
gene: TGS1
product: trimethylguanosine synthase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_005380965.1
SIO_010081: TGS1
so part of: TGS1
location: join(7738103..7738610,7744216..7744280,7746564..7746724,7747063..7747888,7750708..7750825,7752297..7752383,7754250..7754421,7756298..7756604,7758671..7758826,7760788..7760931,7764780..7764996,7765898..7765976,7776842..7777003,7777751..7777875)
location: region:7738103-7777875:1
so has part: feature:7738103-7738610:1:exon
so has part: feature:7744216-7744280:1:exon
so has part: feature:7746564-7746724:1:exon
so has part: feature:7747063-7747888:1:exon
so has part: feature:7750708-7750825:1:exon
so has part: feature:7752297-7752383:1:exon
so has part: feature:7754250-7754421:1:exon
so has part: feature:7756298-7756604:1:exon
so has part: feature:7758671-7758826:1:exon
so has part: feature:7760788-7760931:1:exon
so has part: feature:7764780-7764996:1:exon
so has part: feature:7765898-7765976:1:exon
so has part: feature:7776842-7777003:1:exon
so has part: feature:7777751-7777875:1:exon

position:7777875:1
position: 7777875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738103-7738610:1:exon

position:7738610:1
position: 7738610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7744216-7744280:1:exon

position:7744216:1
position: 7744216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7744280:1
position: 7744280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7746564-7746724:1:exon

position:7746564:1
position: 7746564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7746724:1
position: 7746724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7747063-7747888:1:exon

position:7747063:1
position: 7747063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7747888:1
position: 7747888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7750708-7750825:1:exon

position:7750708:1
position: 7750708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7750825:1
position: 7750825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7752297-7752383:1:exon

position:7752297:1
position: 7752297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7752383:1
position: 7752383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7754250-7754421:1:exon

position:7754250:1
position: 7754250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7754421:1
position: 7754421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7756298-7756604:1:exon

position:7756298:1
position: 7756298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7756604:1
position: 7756604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7758671-7758826:1:exon

position:7758671:1
position: 7758671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7758826:1
position: 7758826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7760788-7760931:1:exon

position:7760788:1
position: 7760788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7760931:1
position: 7760931
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7764780-7764996:1:exon

position:7764780:1
position: 7764780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7764996:1
position: 7764996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:7765898-7765976:1:exon

position:7765898:1
position: 7765898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7765976:1
position: 7765976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:7776842-7777003:1:exon

position:7776842:1
position: 7776842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7777003:1
position: 7777003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:7777751-7777875:1:exon

position:7777751:1
position: 7777751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TGS1
product: trimethylguanosine synthase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_038579328.1
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7738103..7738610,7744216..7744280,7746564..7746724,7747063..7747888,7750708..7750825,7752297..7752383,7754250..7754421,7756298..7756604,7758671..7758826,7760788..7760931,7764780..7764996,7765375..7765632)
location: region:7738103-7765632:1
so has part: feature:7738103-7738610:1:exon
so has part: feature:7744216-7744280:1:exon
so has part: feature:7746564-7746724:1:exon
so has part: feature:7747063-7747888:1:exon
so has part: feature:7750708-7750825:1:exon
so has part: feature:7752297-7752383:1:exon
so has part: feature:7754250-7754421:1:exon
so has part: feature:7756298-7756604:1:exon
so has part: feature:7758671-7758826:1:exon
so has part: feature:7760788-7760931:1:exon
so has part: feature:7764780-7764996:1:exon
so has part: feature:7765375-7765632:1:exon

position:7765632:1
position: 7765632
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738103-7738610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7744216-7744280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7746564-7746724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7747063-7747888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7750708-7750825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7752297-7752383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7754250-7754421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7756298-7756604:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7758671-7758826:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7760788-7760931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7764780-7764996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7765375-7765632:1:exon

position:7765375:1
position: 7765375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TGS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: TGS1
product: trimethylguanosine synthase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_038579327.1
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7738104..7738610,7744216..7744280,7746564..7746724,7747063..7747888,7750708..7750825,7752297..7752383,7754250..7754421,7756298..7756604,7758671..7758826,7760788..7760931,7764780..7764996,7765898..7765976,7777751..7779317)
location: region:7738104-7779317:1
so has part: feature:7738104-7738610:1:exon
so has part: feature:7744216-7744280:1:exon
so has part: feature:7746564-7746724:1:exon
so has part: feature:7747063-7747888:1:exon
so has part: feature:7750708-7750825:1:exon
so has part: feature:7752297-7752383:1:exon
so has part: feature:7754250-7754421:1:exon
so has part: feature:7756298-7756604:1:exon
so has part: feature:7758671-7758826:1:exon
so has part: feature:7760788-7760931:1:exon
so has part: feature:7764780-7764996:1:exon
so has part: feature:7765898-7765976:1:exon
so has part: feature:7777751-7779317:1:exon

position:7738104:1
position: 7738104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738104-7738610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7744216-7744280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7746564-7746724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7747063-7747888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7750708-7750825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7752297-7752383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7754250-7754421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7756298-7756604:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7758671-7758826:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7760788-7760931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7764780-7764996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7765898-7765976:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7777751-7779317:1:exon

TGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trimethylguanosine synthase isoform X1
translation: MCCEKWSRVAEMFLFVEDLEEDAGILCLCSRAFVEDRKLCNLGLKGYYVKGNGDNAGDHATEEEEGGTAESHDSKGLGLDENELDSEAELMRSMGLPLQFGGISAHKNFEVSMNTRNKVKIKKKKKKHQKKYLDEIMRESWRQDYEEDDILASDDPSSVEQYESTKTCKLKTKEDIETENLPVENTLSPKLEITERWEKYWNEYGGGLLWQSWQEKHSGQTLCSEPWNIPDTKEEWEQHYSQLYWYYLEQFQYWEAQGWTFDVSQTCETDTCGSKIEVDSEKDENCMKADLLSFPSPSVTIDSESSSSSDKEHNEILGGISHISLNSEEVEQSQLDSSVSCDGHQWLSEVSSSRECPASGQSEPCNRGTKDSNLSGNRSTNQPAPDSQDSSEASTIKERLHPNSIDGDESEEDPPERKPSKLKRSHELDIDENPDSDFDDNGSLLGFKHGSGQKYGGISNFSHRRVRYLHKNVKYKSKFLDMRRQINMKNKHIFFTEESEKTFKKSKTLTKVEKFLKWINEPMDEEASQESISHDNVQDTCTSSDSEEPEMSVKEGDDPLQTNNPEPEKCNATSSAGELETEKNEGDSTIVIITDKEDGITQITPDSLQVETEAESKKKKKKKKNKSKKVIGLPPEIAAVPELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQSFKCDIVVDAFCGVGGNTIQFALTGKRVIAIDIDPVKIDLARNNAEVYGIADKIEFICGDFLLLASHLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRLSQKITNNIVYFLPRNADIDQVASLAGPGGQVEIEQNFLNNKLKTITAYFGDLIRRSAPES
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7738507..7738610,7744216..7744280,7746564..7746724,7747063..7747888,7750708..7750825,7752297..7752383,7754250..7754421,7756298..7756604,7758671..7758826,7760788..7760931,7764780..7764996,7765898..7765976,7777751..7777873)
location: region:7738507-7777873:1
so has part: feature:7738507-7738610:1:exon
so has part: feature:7744216-7744280:1:exon
so has part: feature:7746564-7746724:1:exon
so has part: feature:7747063-7747888:1:exon
so has part: feature:7750708-7750825:1:exon
so has part: feature:7752297-7752383:1:exon
so has part: feature:7754250-7754421:1:exon
so has part: feature:7756298-7756604:1:exon
so has part: feature:7758671-7758826:1:exon
so has part: feature:7760788-7760931:1:exon
so has part: feature:7764780-7764996:1:exon
so has part: feature:7765898-7765976:1:exon
so has part: feature:7777751-7777873:1:exon

XP_038435255.1
type: Protein
SIO_000068: ncbiprotein

position:7738507:1
position: 7738507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7777873:1
position: 7777873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738507-7738610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7744216-7744280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7746564-7746724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7747063-7747888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7750708-7750825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7752297-7752383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7754250-7754421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7756298-7756604:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7758671-7758826:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7760788-7760931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7764780-7764996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7765898-7765976:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:7777751-7777873:1:exon

TGS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9615
gene: TGS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: trimethylguanosine synthase isoform X2
translation: MCCEKWSRVAEMFLFVEDLEEDAGILCLCSRAFVEDRKLCNLGLKGYYVKGNGDNAGDHATEEEEGGTAESHDSKGLGLDENELDSEAELMRSMGLPLQFGGISAHKNFEVSMNTRNKVKIKKKKKKHQKKYLDEIMRESWRQDYEEDDILASDDPSSVEQYESTKTCKLKTKEDIETENLPVENTLSPKLEITERWEKYWNEYGGGLLWQSWQEKHSGQTLCSEPWNIPDTKEEWEQHYSQLYWYYLEQFQYWEAQGWTFDVSQTCETDTCGSKIEVDSEKDENCMKADLLSFPSPSVTIDSESSSSSDKEHNEILGGISHISLNSEEVEQSQLDSSVSCDGHQWLSEVSSSRECPASGQSEPCNRGTKDSNLSGNRSTNQPAPDSQDSSEASTIKERLHPNSIDGDESEEDPPERKPSKLKRSHELDIDENPDSDFDDNGSLLGFKHGSGQKYGGISNFSHRRVRYLHKNVKYKSKFLDMRRQINMKNKHIFFTEESEKTFKKSKTLTKVEKFLKWINEPMDEEASQESISHDNVQDTCTSSDSEEPEMSVKEGDDPLQTNNPEPEKCNATSSAGELETEKNEGDSTIVIITDKEDGITQITPDSLQVETEAESKKKKKKKKNKSKKVIGLPPEIAAVPELAKYWAQRYRLFSRFDDGIKLDREGWFSVTPEKIAEHIAGRVSQSFKCDIVVDAFCGVGGNTIQFALTGKRVIAIDIDPVKIDLARNNAEVYGIADKIEFICGDFLLLASHLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGGLC
SIO_010081: TGS1
subclass of: SO_0000673
so part of: TGS1
location: join(7738507..7738610,7744216..7744280,7746564..7746724,7747063..7747888,7750708..7750825,7752297..7752383,7754250..7754421,7756298..7756604,7758671..7758826,7760788..7760931,7764780..7764996,7765375..7765387)
location: region:7738507-7765387:1
so has part: feature:7738507-7738610:1:exon
so has part: feature:7744216-7744280:1:exon
so has part: feature:7746564-7746724:1:exon
so has part: feature:7747063-7747888:1:exon
so has part: feature:7750708-7750825:1:exon
so has part: feature:7752297-7752383:1:exon
so has part: feature:7754250-7754421:1:exon
so has part: feature:7756298-7756604:1:exon
so has part: feature:7758671-7758826:1:exon
so has part: feature:7760788-7760931:1:exon
so has part: feature:7764780-7764996:1:exon
so has part: feature:7765375-7765387:1:exon

XP_038435256.1
type: Protein
SIO_000068: ncbiprotein

position:7765387:1
position: 7765387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7738507-7738610:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7744216-7744280:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7746564-7746724:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7747063-7747888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7750708-7750825:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7752297-7752383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:7754250-7754421:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:7756298-7756604:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:7758671-7758826:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:7760788-7760931:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:7764780-7764996:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:7765375-7765387:1:exon

LOC119866667
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LOC119866667
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7803265..7811606)
location: region:7803265-7811606:-1
so has part: feature:7803265-7811606:-1:exon
subclass of: SO_0000011

119866667
type: Gene
SIO_000068: ncbigene

position:7803265:-1
position: 7803265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7811606:-1
position: 7811606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7803265-7811606:-1:exon

LOC119866667
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9615
nc RNA class: lncRNA
gene: LOC119866667
product: uncharacterized LOC119866667
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 20 samples with support for all annotated introns
transcript id: XR_005380843.1
SIO_010081: LOC119866667
subclass of: SO_0000673
so part of: LOC119866667
location: complement(join(7803265..7804522,7811068..7811606))
location: region:7803265-7811606:-1
so has part: feature:7811068-7811606:-1:exon
so has part: feature:7803265-7804522:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7811068-7811606:-1:exon

position:7811068:-1
position: 7811068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7803265-7804522:-1:exon

position:7804522:-1
position: 7804522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LYN
type: Gene
subclass of: SO_0000704
RO_0002162: 9615
gene: LYN
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7830951..7946216
location: region:7830951-7946216:1
so has part: feature:7830951-7946216:1:exon
subclass of: SO_0000010

477886
type: Gene
SIO_000068: ncbigene

position:7830951:1
position: 7830951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7946216:1
position: 7946216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7830951-7946216:1:exon

LYN
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9615
gene: LYN
product: LYN proto-oncogene, Src family tyrosine kinase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 23 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 30 samples with support for all annotated introns
transcript id: XM_038579338.1
SIO_010081: LYN
subclass of: SO_0000673
so part of: LYN
location: join(7830951..7831032,7885943..7886079,7889003..7889048,7890288..7890393,7891691..7891789,7891911..7892014,7892734..7892883,7893698..7893850,7907857..7908039,7910012..7910088,7932908..7933061,7936010..7936141,7944764..7946216)
location: region:7830951-7946216:1
so has part: feature:7830951-7831032:1:exon
so has part: feature:7885943-7886079:1:exon
so has part: feature:7889003-7889048:1:exon
so has part: feature:7890288-7890393:1:exon
so has part: feature:7891691-7891789:1:exon
so has part: feature:7891911-7892014:1:exon
so has part: feature:7892734-7892883:1:exon
so has part: feature:7893698-7893850:1:exon
so has part: feature:7907857-7908039:1:exon
so has part: feature:7910012-7910088:1:exon
so has part: feature:7932908-7933061:1:exon
so has part: feature:7936010-7936141:1:exon
so has part: feature:7944764-7946216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7830951-7831032:1:exon

position:7831032:1
position: 7831032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7885943-7886079:1:exon

position:7885943:1
position: 7885943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7886079:1
position: 7886079
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7889003-7889048:1:exon

position:7889003:1
position: 7889003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7889048:1
position: 7889048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7890288-7890393:1:exon

position:7890288:1
position: 7890288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7890393:1
position: 7890393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7891691-7891789:1:exon

position:7891691:1
position: 7891691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7891789:1
position: 7891789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7891911-7892014:1:exon

position:7891911:1
position: 7891911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7892014:1
position: 7892014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:7892734-7892883:1:exon

position:7892734:1
position: 7892734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7892883:1
position: 7892883
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:7893698-7893850:1:exon

position:7893698:1
position: 7893698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7893850:1
position: 7893850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:7907857-7908039:1:exon

position:7907857:1
position: 7907857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7908039:1
position: 7908039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:7910012-7910088:1:exon

position:7910012:1
position: 7910012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7910088:1
position: 7910088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:7932908-7933061:1:exon

position:7932908:1
position: 7932908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition