Homo sapiens chromosome Y, GRCh38.p14 Primary Assembly.
type: Entry
definition: Homo sapiens chromosome Y, GRCh38.p14 Primary Assembly.
sequence version: NC_000024.10
sequence date: 2023-03-20
sequence: sequence
division: CON
label: NC_000024.10
type: RefSeq
SIO_000068: refseq
dblink: PRJNA168
keyword: RefSeq
source: Homo sapiens (human)
organism: Homo sapiens
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
reference: 1
references: 15496913
reference: 2
references: 12815422
reference: 3
references: 11237011
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM000686.2.\n\nOn Feb 3, 2014 this sequence version replaced NC_000024.9.\nAssembly Name: GRCh38.p14 Primary Assembly\nThe DNA sequence is composed of genomic sequence, primarily\nfinished clones that were sequenced as part of the Human Genome\nProject. PCR products and WGS shotgun sequence have been added\nwhere necessary to fill gaps or correct errors. All such additions\nare manually curated by GRC staff. For more information see:\nhttps://genomereference.org.\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Updated annotation\nAnnotation Name :: GCF_000001405.40-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n RefSeqFE; cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/15/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 57227415
topology: linear
so has quality: SO_0000987
location: 1..57227415
location: region:1-57227415:1
RO_0002162: 9606

NC_000024
type: RefSeq
SIO_000068: refseq

PRJNA168
type: BioProject
SIO_000068: bioproject

1
title: Finishing the euchromatic sequence of the human genome
journal: Nature
volume: 431
issue: 7011
pages: 931-945
year: 2004
pubmed: 15496913

15496913
type: PubMed
SIO_000068: pubmed

2
title: The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes
author: Skaletsky, H.
author: Kuroda-Kawaguchi, T.
author: Minx, P.J.
author: Cordum, H.S.
author: Hillier, L.
author: Brown, L.G.
author: Repping, S.
author: Pyntikova, T.
author: Ali, J.
author: Bieri, T.
author: Chinwalla, A.
author: Delehaunty, A.
author: Delehaunty, K.
author: Du, H.
author: Fewell, G.
author: Fulton, L.
author: Fulton, R.
author: Graves, T.
author: Hou, S.F.
author: Latrielle, P.
author: Leonard, S.
author: Mardis, E.
author: Maupin, R.
author: McPherson, J.
author: Miner, T.
author: Nash, W.
author: Nguyen, C.
author: Ozersky, P.
author: Pepin, K.
author: Rock, S.
author: Rohlfing, T.
author: Scott, K.
author: Schultz, B.
author: Strong, C.
author: Tin-Wollam, A.
author: Yang, S.P.
author: Waterston, R.H.
author: Wilson, R.K.
author: Rozen, S.
author: Page, D.C.
journal: Nature
volume: 423
issue: 6942
pages: 825-837
year: 2003
pubmed: 12815422

12815422
type: PubMed
SIO_000068: pubmed

3
title: Initial sequencing and analysis of the human genome
author: Lander, E.S.
author: Linton, L.M.
author: Birren, B.
author: Nusbaum, C.
author: Zody, M.C.
author: Baldwin, J.
author: Devon, K.
author: Dewar, K.
author: Doyle, M.
author: FitzHugh, W.
author: Funke, R.
author: Gage, D.
author: Harris, K.
author: Heaford, A.
author: Howland, J.
author: Kann, L.
author: Lehoczky, J.
author: LeVine, R.
author: McEwan, P.
author: McKernan, K.
author: Meldrim, J.
author: Mesirov, J.P.
author: Miranda, C.
author: Morris, W.
author: Naylor, J.
author: Raymond, C.
author: Rosetti, M.
author: Santos, R.
author: Sheridan, A.
author: Sougnez, C.
author: Stange-Thomann, N.
author: Stojanovic, N.
author: Subramanian, A.
author: Wyman, D.
author: Rogers, J.
author: Sulston, J.
author: Ainscough, R.
author: Beck, S.
author: Bentley, D.
author: Burton, J.
author: Clee, C.
author: Carter, N.
author: Coulson, A.
author: Deadman, R.
author: Deloukas, P.
author: Dunham, A.
author: Dunham, I.
author: Durbin, R.
author: French, L.
author: Grafham, D.
author: Gregory, S.
author: Hubbard, T.
author: Humphray, S.
author: Hunt, A.
author: Jones, M.
author: Lloyd, C.
author: McMurray, A.
author: Matthews, L.
author: Mercer, S.
author: Milne, S.
author: Mullikin, J.C.
author: Mungall, A.
author: Plumb, R.
author: Ross, M.
author: Shownkeen, R.
author: Sims, S.
author: Waterston, R.H.
author: Wilson, R.K.
author: Hillier, L.W.
author: McPherson, J.D.
author: Marra, M.A.
author: Mardis, E.R.
author: Fulton, L.A.
author: Chinwalla, A.T.
author: Pepin, K.H.
author: Gish, W.R.
author: Chissoe, S.L.
author: Wendl, M.C.

11237011
type: PubMed
SIO_000068: pubmed

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:57227415:1
position: 57227415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-57227415:1:source
so part of: sequence
organism: Homo sapiens
mol type: genomic DNA
chromosome: Y

9606
type: Taxonomy
SIO_000068: taxonomy

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrX:187587-188168
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 270920..271501
location: region:270920-271501:1
so has part: feature:270920-271501:1:region

127138811
type: Gene
SIO_000068: ncbigene

position:270920:1
position: 270920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:271501:1
position: 271501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270920-271501:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrX:187587-188168 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 270920..271501
location: region:270920-271501:1
so has part: feature:270920-271501:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:270920-271501:1:region

LOC124905300
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC124905300
note: vegetative cell wall protein gp1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(275294..276997)
location: region:275294-276997:-1
so has part: feature:275294-276997:-1:exon
subclass of: SO_0000010

124905300
type: Gene
SIO_000068: ncbigene

position:275294:-1
position: 275294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276997:-1
position: 276997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:275294-276997:-1:exon

LOC124905300
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: LOC124905300
product: vegetative cell wall protein gp1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 87% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_047442785.1
SIO_010081: LOC124905300
subclass of: SO_0000673
so part of: LOC124905300
location: complement(join(275294..275821,276062..276432,276740..276777,276957..276997))
location: region:275294-276997:-1
so has part: feature:276957-276997:-1:exon
so has part: feature:276740-276777:-1:exon
so has part: feature:276062-276432:-1:exon
so has part: feature:275294-275821:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276957-276997:-1:exon

position:276957:-1
position: 276957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:276740-276777:-1:exon

position:276740:-1
position: 276740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276777:-1
position: 276777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:276062-276432:-1:exon

position:276062:-1
position: 276062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276432:-1
position: 276432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:275294-275821:-1:exon

position:275821:-1
position: 275821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC124905300
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: LOC124905300
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vegetative cell wall protein gp1-like
translation: MTDGPRRPVTRQAGCPDPSPRRPRRQGDLPSGERGRHTHLPAAGIPELLAAPAGSLRDTLPKTHPVRCDWLWRGHSCHQEEGQPAPATDLSPPQERDRLGCKHRPELPRGPHRPGLGTGRPLPGDPTVCPNKVSPGSPGQGLRDSKDVPEVPTSPAPRGPDPGQPVPPPSVEVAPPSAAHACDLPPRANLELTRSPGQGSVQGPVPASSWLLPVHPAGAPHAPRCLPPRAGLQDRASVGFRECTERLGAAVDGSKGCLGIPCSRVEFSRIATAGASLPAPHFCPGSLFPPSPQLWGTLRAAAVLAQGHLVGLQATGHRPLRLFPS
SIO_010081: LOC124905300
subclass of: SO_0000673
so part of: LOC124905300
location: complement(join(275294..275821,276062..276432,276740..276777,276957..276997))
location: region:275294-276997:-1
so has part: feature:276957-276997:-1:exon
so has part: feature:276740-276777:-1:exon
so has part: feature:276062-276432:-1:exon
so has part: feature:275294-275821:-1:exon

XP_047298741.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:276957-276997:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:276740-276777:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:276062-276432:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:275294-275821:-1:exon

PLCXD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: phosphatidylinositol specific phospholipase C X domain containing 1; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 276356..303356
location: region:276356-303356:1
so has part: feature:276356-303356:1:exon
subclass of: SO_0000010

55344
type: Gene
SIO_000068: ncbigene

HGNC:23148
type: HGNC
SIO_000068: hgnc

300974
type: OMIM
SIO_000068: omim

position:276356:1
position: 276356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:303356:1
position: 303356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276356-303356:1:exon

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001370370.1
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(276356..276394,281482..281684,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:276356-303356:1
so has part: feature:276356-276394:1:exon
so has part: feature:281482-281684:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276356-276394:1:exon

position:276394:1
position: 276394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281482-281684:1:exon

position:281482:1
position: 281482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:281684:1
position: 281684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:284167-284314:1:exon

position:284167:1
position: 284167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:284314:1
position: 284314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:288733-288869:1:exon

position:288733:1
position: 288733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:288869:1
position: 288869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:290648-290776:1:exon

position:290648:1
position: 290648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:290776:1
position: 290776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:291499-291654:1:exon

position:291499:1
position: 291499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:291654:1
position: 291654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:293035-293218:1:exon

position:293035:1
position: 293035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:293218:1
position: 293218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:299097-303356:1:exon

position:299097:1
position: 299097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCXD1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_028057.2
SIO_010081: PLCXD1
so part of: PLCXD1
location: join(276356..276394,281482..281684,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299392,302593..303356)
location: region:276356-303356:1
so has part: feature:276356-276394:1:exon
so has part: feature:281482-281684:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299392:1:exon
so has part: feature:302593-303356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276356-276394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281482-281684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299097-299392:1:exon

position:299392:1
position: 299392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:302593-303356:1:exon

position:302593:1
position: 302593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant 6
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001370372.1
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(276356..276394,281482..281684,284167..284314,288733..288869,290648..290776,293035..293218,299097..303356)
location: region:276356-303356:1
so has part: feature:276356-276394:1:exon
so has part: feature:281482-281684:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276356-276394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:281482-281684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001370371.1
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(276356..276394,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:276356-303356:1
so has part: feature:276356-276394:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:276356-276394:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047442741.1
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(276753..276767,281482..281684,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:276753-303356:1
so has part: feature:276753-276767:1:exon
so has part: feature:281482-281684:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

position:276753:1
position: 276753
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:276753-276767:1:exon

position:276767:1
position: 276767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281482-281684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_011545633.4
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(281159..281256,281482..281684,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:281159-303356:1
so has part: feature:281159-281256:1:exon
so has part: feature:281482-281684:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

position:281159:1
position: 281159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281159-281256:1:exon

position:281256:1
position: 281256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:281482-281684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_018390.4
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(281381..281684,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:281381-303356:1
so has part: feature:281381-281684:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

position:281381:1
position: 281381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:281381-281684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant 7
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_163416.1
SIO_010081: PLCXD1
so part of: PLCXD1
location: join(281381..281684,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299779,301890..303356)
location: region:281381-303356:1
so has part: feature:281381-281684:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299779:1:exon
so has part: feature:301890-303356:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:281381-281684:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299097-299779:1:exon

position:299779:1
position: 299779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:301890-303356:1:exon

position:301890:1
position: 301890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant 5
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001370373.1
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(283478..283520,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:283478-303356:1
so has part: feature:283478-283520:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

position:283478:1
position: 283478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283478-283520:1:exon

position:283520:1
position: 283520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_024452491.2
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(283518..283551,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:283518-303356:1
so has part: feature:283518-283551:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

position:283518:1
position: 283518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283518-283551:1:exon

position:283551:1
position: 283551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
product: phosphatidylinositol specific phospholipase C X domain containing 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047442740.1
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(283687..284033,284167..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..303356)
location: region:283687-303356:1
so has part: feature:283687-284033:1:exon
so has part: feature:284167-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-303356:1:exon

position:283687:1
position: 283687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283687-284033:1:exon

position:284033:1
position: 284033
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:284167-284314:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:299097-303356:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform X1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

XP_024308259.1
type: Protein
SIO_000068: ncbiprotein

position:284188:1
position: 284188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:299335:1
position: 299335
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: isoform 1 is encoded by transcript variant 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform 1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

NP_001357300.1
type: Protein
SIO_000068: ncbiprotein

CCDS14103.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: isoform 1 is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform 1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

NP_001357299.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: isoform 1 is encoded by transcript variant 5; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform 1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

NP_001357302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform X1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

XP_047298696.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform X1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

XP_047298697.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform X1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

XP_011543935.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform 1
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEDTLTEISEWLERHPREVVILACRNFEGLSEDLHEYLVACIKNIFGDMLCPRGEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,291499..291654,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:291499-291654:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

NP_060860.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:291499-291654:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:299097-299335:1:exon

PLCXD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: LL0XNC01-136G2.1
gene: PLCXD1
gene synonym: LL0XNC01-136G2.1
note: isoform 2 is encoded by transcript variant 6; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: PI-PLC X domain-containing protein 1 isoform 2
translation: MGGQVSASNSFSRLHCRNANEDWMSALCPRLWDVPLHHLSIPGSHDTMTYCLNKKSPISHEESRLLQLLNKALPCITRPVVLKWSVTQALDVTEQLDAGVRYLDLRIAHMLEGSEKNLHFVHMVYTTALVEEVPTLRQLWSRGQQVIVSYEDESSLRRHHELWPGVPYWWGNRVKTEALIRYLETMKSCGRPGGLFVAGINLTENLQYVLAHPSESLEKMTLPNLPRLSAWVREQCPGPGSRCTNIIAGDFIGADGFVSDVIALNQKLLWC
SIO_010081: PLCXD1
subclass of: SO_0000673
so part of: PLCXD1
location: join(284188..284314,288733..288869,290648..290776,293035..293218,299097..299335)
location: region:284188-299335:1
so has part: feature:284188-284314:1:exon
so has part: feature:288733-288869:1:exon
so has part: feature:290648-290776:1:exon
so has part: feature:293035-293218:1:exon
so has part: feature:299097-299335:1:exon

NP_001357301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284188-284314:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:288733-288869:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:290648-290776:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:293035-293218:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:299097-299335:1:exon

GTPBP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: GTP binding protein 6 (putative); Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(304759..318796)
location: region:304759-318796:-1
so has part: feature:304759-318796:-1:exon
subclass of: SO_0000010

8225
type: Gene
SIO_000068: ncbigene

HGNC:30189
type: HGNC
SIO_000068: hgnc

300124
type: OMIM
SIO_000068: omim

position:304759:-1
position: 304759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318796:-1
position: 318796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:304759-318796:-1:exon

GTPBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
product: GTP binding protein 6 (putative)
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_012227.4
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(304759..305197,307360..307512,307732..307880,311419..311627,312766..312924,314150..314217,314890..315020,315229..315299,316914..317051,318439..318796))
location: region:304759-318796:-1
so has part: feature:318439-318796:-1:exon
so has part: feature:316914-317051:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312766-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:304759-305197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318439-318796:-1:exon

position:318439:-1
position: 318439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:316914-317051:-1:exon

position:316914:-1
position: 316914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317051:-1
position: 317051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:315229-315299:-1:exon

position:315229:-1
position: 315229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315299:-1
position: 315299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:314890-315020:-1:exon

position:314890:-1
position: 314890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315020:-1
position: 315020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:314150-314217:-1:exon

position:314150:-1
position: 314150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:314217:-1
position: 314217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:312766-312924:-1:exon

position:312766:-1
position: 312766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:312924:-1
position: 312924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:311419-311627:-1:exon

position:311419:-1
position: 311419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:311627:-1
position: 311627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:307732-307880:-1:exon

position:307732:-1
position: 307732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307880:-1
position: 307880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:307360-307512:-1:exon

position:307360:-1
position: 307360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:307512:-1
position: 307512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:304759-305197:-1:exon

position:305197:-1
position: 305197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GTPBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
product: GTP binding protein 6 (putative), transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 110 ESTs, 202 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 88 samples with support for all annotated introns
transcript id: XM_047442759.1
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(304759..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315299,316914..317051,318439..318796))
location: region:304759-318796:-1
so has part: feature:318439-318796:-1:exon
so has part: feature:316914-317051:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:304759-305197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318439-318796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316914-317051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312532-312924:-1:exon

position:312532:-1
position: 312532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:304759-305197:-1:exon

GTPBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
product: GTP binding protein 6 (putative), transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 101 ESTs, 160 long SRA reads, 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_047442761.1
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(304759..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315299,316914..317051,317279..317419,318439..318796))
location: region:304759-318796:-1
so has part: feature:318439-318796:-1:exon
so has part: feature:317279-317419:-1:exon
so has part: feature:316914-317051:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:304759-305197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318439-318796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317279-317419:-1:exon

position:317279:-1
position: 317279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317419:-1
position: 317419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316914-317051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312532-312924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:304759-305197:-1:exon

GTPBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
product: GTP binding protein 6 (putative), transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 101 ESTs, 160 long SRA reads, 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_047442760.1
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(304759..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315299,316914..317051,317279..317484,318439..318796))
location: region:304759-318796:-1
so has part: feature:318439-318796:-1:exon
so has part: feature:317279-317484:-1:exon
so has part: feature:316914-317051:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:304759-305197:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318439-318796:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:317279-317484:-1:exon

position:317484:-1
position: 317484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:316914-317051:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:312532-312924:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:304759-305197:-1:exon

GTPBP6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
product: GTP binding protein 6 (putative), transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 101 ESTs, 153 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 43 samples with support for all annotated introns
transcript id: XM_047442762.1
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(304759..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315299,316780..316845))
location: region:304759-316845:-1
so has part: feature:316780-316845:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:304759-305197:-1:exon

position:316845:-1
position: 316845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316780-316845:-1:exon

position:316780:-1
position: 316780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312532-312924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:304759-305197:-1:exon

GTPBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: putative GTP-binding protein 6
translation: MWALRAAVRPGLRLSRVGRGRSAPRAAAPSCPARALAAVGRRSPGNLEGPWGGGRGLRADGGRSRTGDDEEEPEDADENAEEELLRGEPLLPAGTQRVCLVHPDVKWGPGKSQMTRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAADVRVIISNSAYGKFRKLFPG
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(305074..305197,307360..307512,307732..307880,311419..311627,312766..312924,314150..314217,314890..315020,315229..315299,316914..317051,318439..318787))
location: region:305074-318787:-1
so has part: feature:318439-318787:-1:exon
so has part: feature:316914-317051:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312766-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:305074-305197:-1:exon

NP_036359.3
type: Protein
SIO_000068: ncbiprotein

CCDS75943.1
type: CCDS
SIO_000068: ccds

position:305074:-1
position: 305074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318787:-1
position: 318787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318439-318787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316914-317051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312766-312924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305074-305197:-1:exon

GTPBP6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: propagated from UniProtKB/Swiss-Prot (O43824.4); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(318542..318736)
location: region:318542-318736:-1
so has part: feature:318542-318736:-1:exon

position:318542:-1
position: 318542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:318736:-1
position: 318736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318542-318736:-1:exon

GTPBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative GTP-binding protein 6 isoform X1
translation: MWALRAAVRPGLRLSRVGRGRSAPRAAAPSCPARALAAVGRRSPGNLEGPWGGGRGLRADGGRSRTGDDEEEPEDADENAEEELLRGEPLLPAGTQRVCLVHPDVKWGPGKSQMTRAEWQVAEATALVHTLDGWSVVQTMVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGEHAPRGGAFRGLRVTGEDSPGGGQGVPVVSVVPYDSCGEHVPRRGGSHGRRVGYTSCCESSPRRRVSCGLCVGYSSQGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAADVRVIISNSAYGKFRKLFPG
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(305074..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315299,316914..317051,318439..318787))
location: region:305074-318787:-1
so has part: feature:318439-318787:-1:exon
so has part: feature:316914-317051:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:305074-305197:-1:exon

XP_047298715.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:318439-318787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:316914-317051:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:312532-312924:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:305074-305197:-1:exon

GTPBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative GTP-binding protein 6 isoform X2
translation: MVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGEHAPRGGAFRGLRVTGEDSPGGGQGVPVVSVVPYDSCGEHVPRRGGSHGRRVGYTSCCESSPRRRVSCGLCVGYSSQGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAADVRVIISNSAYGKFRKLFPG
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(305074..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315299,316914..316983))
location: region:305074-316983:-1
so has part: feature:316914-316983:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:305074-305197:-1:exon

XP_047298716.1
type: Protein
SIO_000068: ncbiprotein

position:316983:-1
position: 316983
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:316914-316983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312532-312924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305074-305197:-1:exon

GTPBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative GTP-binding protein 6 isoform X2
translation: MVVSTKTPDRKLIFGKGNFEHLTEKIRGSPDITCVFLNVERMAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGEHAPRGGAFRGLRVTGEDSPGGGQGVPVVSVVPYDSCGEHVPRRGGSHGRRVGYTSCCESSPRRRVSCGLCVGYSSQGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAADVRVIISNSAYGKFRKLFPG
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(305074..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315299,316914..316983))
location: region:305074-316983:-1
so has part: feature:316914-316983:-1:exon
so has part: feature:315229-315299:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:305074-305197:-1:exon

XP_047298717.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:316914-316983:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315229-315299:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:312532-312924:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:305074-305197:-1:exon

GTPBP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: PGPL
gene: GTPBP6
gene synonym: PGPL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative GTP-binding protein 6 isoform X3
translation: MAAPTKKELEAAWGVEVFDRFTVVLHIFRCNARTKEARLQVALAEMPLHRSNLKRDVAHLYRGVGSRYIMGSGESFMQLQQRLLREKEAKIRKALDRLRKKRHLLRRQRTRREFPVISVVGYTNCGEHAPRGGAFRGLRVTGEDSPGGGQGVPVVSVVPYDSCGEHVPRRGGSHGRRVGYTSCCESSPRRRVSCGLCVGYSSQGKTTLIKALTGDAAIQPRDQLFATLDVTAHAGTLPSRMTVLYVDTIGFLSQLPHGLIESFSATLEDVAHSDLILHVRDVSHPEAELQKCSVLSTLRGLQLPAPLLDSMVEVHNKVDLVPGYSPTEPNVVPVSALRGHGLQELKAELDAAVLKATGRQILTLRVRLAGAQLSWLYKEATVQEVDVIPEDGAADVRVIISNSAYGKFRKLFPG
SIO_010081: GTPBP6
subclass of: SO_0000673
so part of: GTPBP6
location: complement(join(305074..305197,307360..307512,307732..307880,311419..311627,312532..312924,314150..314217,314890..315020,315229..315246))
location: region:305074-315246:-1
so has part: feature:315229-315246:-1:exon
so has part: feature:314890-315020:-1:exon
so has part: feature:314150-314217:-1:exon
so has part: feature:312532-312924:-1:exon
so has part: feature:311419-311627:-1:exon
so has part: feature:307732-307880:-1:exon
so has part: feature:307360-307512:-1:exon
so has part: feature:305074-305197:-1:exon

XP_047298718.1
type: Protein
SIO_000068: ncbiprotein

position:315246:-1
position: 315246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:315229-315246:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:314890-315020:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:314150-314217:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:312532-312924:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:311419-311627:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307732-307880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307360-307512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:305074-305197:-1:exon

LINC00685
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CXYorf10
alternative label: NCRNA00107
alternative label: PPP2R3B-AS1
gene: LINC00685
gene synonym: CXYorf10; NCRNA00107; PPP2R3B-AS1
note: long intergenic non-protein coding RNA 685; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 319145..321332
location: region:319145-321332:1
so has part: feature:319145-321332:1:exon
subclass of: SO_0000011

283981
type: Gene
SIO_000068: ncbigene

HGNC:27560
type: HGNC
SIO_000068: hgnc

position:319145:1
position: 319145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:321332:1
position: 321332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:319145-321332:1:exon

LINC00685
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: CXYorf10
alternative label: NCRNA00107
alternative label: PPP2R3B-AS1
nc RNA class: lncRNA
gene: LINC00685
gene synonym: CXYorf10; NCRNA00107; PPP2R3B-AS1
product: long intergenic non-protein coding RNA 685, transcript variant 1
inference: similar to RNA sequence (same species):RefSeq:NR_027232.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 4 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027232.1
SIO_010081: LINC00685
subclass of: SO_0000673
so part of: LINC00685
location: 319145..321332
location: region:319145-321332:1
so has part: feature:319145-321332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319145-321332:1:exon

LINC00685
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: CXYorf10
alternative label: NCRNA00107
alternative label: PPP2R3B-AS1
nc RNA class: lncRNA
gene: LINC00685
gene synonym: CXYorf10; NCRNA00107; PPP2R3B-AS1
product: long intergenic non-protein coding RNA 685, transcript variant 2
inference: similar to RNA sequence (same species):RefSeq:NR_027231.1
exception: annotated by transcript or proteomic data
note: The RefSeq transcript has 3 substitutions compared to this genomic sequence; Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027231.1
SIO_010081: LINC00685
subclass of: SO_0000673
so part of: LINC00685
location: join(319145..319551,320208..321332)
location: region:319145-321332:1
so has part: feature:319145-319551:1:exon
so has part: feature:320208-321332:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:319145-319551:1:exon

position:319551:1
position: 319551
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:320208-321332:1:exon

position:320208:1
position: 320208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP2R3B
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: protein phosphatase 2 regulatory subunit B''beta; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(333933..386907)
location: region:333933-386907:-1
so has part: feature:333933-386907:-1:exon
subclass of: SO_0000010

28227
type: Gene
SIO_000068: ncbigene

HGNC:13417
type: HGNC
SIO_000068: hgnc

300339
type: OMIM
SIO_000068: omim

position:333933:-1
position: 333933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386907:-1
position: 386907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:333933-386907:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_013239.5
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(333933..334517,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,386368..386907))
location: region:333933-386907:-1
so has part: feature:386368-386907:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:333933-334517:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386907:-1:exon

position:386368:-1
position: 386368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

position:361405:-1
position: 361405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:361590:-1
position: 361590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

position:347590:-1
position: 347590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347693:-1
position: 347693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

position:347234:-1
position: 347234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347336:-1
position: 347336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

position:346701:-1
position: 346701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346775:-1
position: 346775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

position:346174:-1
position: 346174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346260:-1
position: 346260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

position:345516:-1
position: 345516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345672:-1
position: 345672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

position:341883:-1
position: 341883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341931:-1
position: 341931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

position:341307:-1
position: 341307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341396:-1
position: 341396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

position:340765:-1
position: 340765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340940:-1
position: 340940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

position:338778:-1
position: 338778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338896:-1
position: 338896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

position:338604:-1
position: 338604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:338710:-1
position: 338710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:333933-334517:-1:exon

position:334517:-1
position: 334517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 26 ESTs, 54 long SRA reads, 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_047442728.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(333933..334517,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,373532..376209))
location: region:333933-376209:-1
so has part: feature:373532-376209:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:333933-334517:-1:exon

position:376209:-1
position: 376209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373532-376209:-1:exon

position:373532:-1
position: 373532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:333933-334517:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047442723.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334238..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,386368..386907))
location: region:334238-386907:-1
so has part: feature:386368-386907:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334238-335063:-1:exon

position:334238:-1
position: 334238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334238-335063:-1:exon

position:335063:-1
position: 335063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047442726.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334238..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,362255..362332,386368..386907))
location: region:334238-386907:-1
so has part: feature:386368-386907:-1:exon
so has part: feature:362255-362332:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334238-335063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:362255-362332:-1:exon

position:362255:-1
position: 362255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:362332:-1
position: 362332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334238-335063:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047442727.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334238..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,362255..362332,385042..385105,386368..386907))
location: region:334238-386907:-1
so has part: feature:386368-386907:-1:exon
so has part: feature:385042-385105:-1:exon
so has part: feature:362255-362332:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334238-335063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385042-385105:-1:exon

position:385042:-1
position: 385042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:385105:-1
position: 385105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:362255-362332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:334238-335063:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047442724.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334238..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,373532..376209))
location: region:334238-376209:-1
so has part: feature:373532-376209:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334238-335063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:373532-376209:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334238-335063:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_047442725.1
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334238..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,362255..362332,363920..364475))
location: region:334238-364475:-1
so has part: feature:363920-364475:-1:exon
so has part: feature:362255-362332:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334238-335063:-1:exon

position:364475:-1
position: 364475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363920-364475:-1:exon

position:363920:-1
position: 363920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:362255-362332:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:334238-335063:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta
translation: MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPTAPLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334367..334517,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,386368..386691))
location: region:334367-386691:-1
so has part: feature:386368-386691:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334367-334517:-1:exon

NP_037371.2
type: Protein
SIO_000068: ncbiprotein

CCDS14104.1
type: CCDS
SIO_000068: ccds

position:334367:-1
position: 334367
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386691:-1
position: 386691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334367-334517:-1:exon

PPP2R3B
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: propagated from UniProtKB/Swiss-Prot (Q9Y5P8.2); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(361522..361590,386368..386571))
location: region:361522-386571:-1
so has part: feature:386368-386571:-1:exon
so has part: feature:361522-361590:-1:exon

position:361522:-1
position: 361522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:386571:-1
position: 386571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386571:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361522-361590:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1
translation: MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPTAPLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGISESLCGPWPRWVPRSSARRHCRDLKGRRASSPRTAACSGQNGSGSLHWELLCFGRMCLNCGPVCSPVLCGHHDPVVNTGPVQLALGKRRARPGPLCVAHARGSVPSWVGFHLHRRPLPREHSWSRRPQPGARCWLSGWSSRSAQGTVSCWRLAAEQPVFPGKRPRACSALLATSSPSPRCRFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334367..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,386368..386691))
location: region:334367-386691:-1
so has part: feature:386368-386691:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334367-335063:-1:exon

XP_047298679.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334367-335063:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X5
translation: MERAEPGPRLQRPAGPGPALPRERGARPGPRRALRAGGMRLRERSLRQDPDLRQELASLARGCDFVLPSRFKKRLKAFQQVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334367..334517,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,373532..373771))
location: region:334367-373771:-1
so has part: feature:373532-373771:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334367-334517:-1:exon

XP_047298684.1
type: Protein
SIO_000068: ncbiprotein

position:373771:-1
position: 373771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:373532-373771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334367-334517:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X4
translation: MERAEPGPRLQRPAGPGPALPRERGARPGPRRALRAGGMRLRERSLRQDPDLRQELASLARGCDFVLPSRFKKRLKAFQQVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGISESLCGPWPRWVPRSSARRHCRDLKGRRASSPRTAACSGQNGSGSLHWELLCFGRMCLNCGPVCSPVLCGHHDPVVNTGPVQLALGKRRARPGPLCVAHARGSVPSWVGFHLHRRPLPREHSWSRRPQPGARCWLSGWSSRSAQGTVSCWRLAAEQPVFPGKRPRACSALLATSSPSPRCRFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334367..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,373532..373771))
location: region:334367-373771:-1
so has part: feature:373532-373771:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334367-335063:-1:exon

XP_047298680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:373532-373771:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334367-335063:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3
translation: MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGISESLCGPWPRWVPRSSARRHCRDLKGRRASSPRTAACSGQNGSGSLHWELLCFGRMCLNCGPVCSPVLCGHHDPVVNTGPVQLALGKRRARPGPLCVAHARGSVPSWVGFHLHRRPLPREHSWSRRPQPGARCWLSGWSSRSAQGTVSCWRLAAEQPVFPGKRPRACSALLATSSPSPRCRFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334367..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361431))
location: region:334367-361431:-1
so has part: feature:361405-361431:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334367-335063:-1:exon

XP_047298681.1
type: Protein
SIO_000068: ncbiprotein

position:361431:-1
position: 361431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:361405-361431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:334367-335063:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3
translation: MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGISESLCGPWPRWVPRSSARRHCRDLKGRRASSPRTAACSGQNGSGSLHWELLCFGRMCLNCGPVCSPVLCGHHDPVVNTGPVQLALGKRRARPGPLCVAHARGSVPSWVGFHLHRRPLPREHSWSRRPQPGARCWLSGWSSRSAQGTVSCWRLAAEQPVFPGKRPRACSALLATSSPSPRCRFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334367..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361431))
location: region:334367-361431:-1
so has part: feature:361405-361431:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334367-335063:-1:exon

XP_047298682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361405-361431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:334367-335063:-1:exon

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X3
translation: MDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGISESLCGPWPRWVPRSSARRHCRDLKGRRASSPRTAACSGQNGSGSLHWELLCFGRMCLNCGPVCSPVLCGHHDPVVNTGPVQLALGKRRARPGPLCVAHARGSVPSWVGFHLHRRPLPREHSWSRRPQPGARCWLSGWSSRSAQGTVSCWRLAAEQPVFPGKRPRACSALLATSSPSPRCRFEAELSPVEQKLSALRSPLAQRPFFEAPSPLGAVDLYEYACGDEDLEPL
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334367..335063,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361431))
location: region:334367-361431:-1
so has part: feature:361405-361431:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334367-335063:-1:exon

XP_047298683.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:361405-361431:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:334367-335063:-1:exon

PPP2R3B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
product: protein phosphatase 2 regulatory subunit B''beta, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 6 long SRA reads, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_011545630.4
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(334958..335998,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,386368..386907))
location: region:334958-386907:-1
so has part: feature:386368-386907:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:334958-335998:-1:exon

position:334958:-1
position: 334958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386907:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:334958-335998:-1:exon

position:335998:-1
position: 335998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PPP2R3B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: NYREN8
alternative label: PPP2R3L
alternative label: PPP2R3LY
alternative label: PR48
alternative label: PR70
gene: PPP2R3B
gene synonym: NYREN8; PPP2R3L; PPP2R3LY; PR48; PR70
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X2
translation: MPPGKVLQPVLKMKVDELFLYWLSEASTQRMLQDCLRRIKAPGRDQPTPGDGEQPGAWPTAPLAAPRPSGLEPPGTPGPGPALPLGAASSPRNAPHVRGTRRSAGTRVVQTRKEEPLPPATSQSIPTFYFPRGRPQDSVNVDAVISKIESTFARFPHERATMDDMGLVAKACGCPLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFVPFLQDVVNTHPGLSFLKEASEFHSRYITTVIQRIFYAVNRSWSGRITCAELRRSSFLQNVALLEEEADINQLTEFFSYEHFYVIYCKFWELDTDHDLLIDADDLARHNDHALSTKMIDRIFSGAVTRGRKVQKEGKISYADFVWFLISEEDKKTPTSIEYWFRCMDLDGDGALSMFELEYFYEEQCRRLDSMAIEALPFQDCLCQMLDLVKPRTEGKITLQDLKRCKLANVFFDTFFNIEKYLDHEQKEQISLLRDGDSGGPELSDWEKYAAEEYDILVAEETAGEPWEDGDGVSPCCPGWSWMPELEGSPRLGPPTCRNYRCEPLPSLE
SIO_010081: PPP2R3B
subclass of: SO_0000673
so part of: PPP2R3B
location: complement(join(335878..335998,338604..338710,338778..338896,340765..340940,341307..341396,341883..341931,345516..345672,346174..346260,346701..346775,347234..347336,347590..347693,361405..361590,386368..386691))
location: region:335878-386691:-1
so has part: feature:386368-386691:-1:exon
so has part: feature:361405-361590:-1:exon
so has part: feature:347590-347693:-1:exon
so has part: feature:347234-347336:-1:exon
so has part: feature:346701-346775:-1:exon
so has part: feature:346174-346260:-1:exon
so has part: feature:345516-345672:-1:exon
so has part: feature:341883-341931:-1:exon
so has part: feature:341307-341396:-1:exon
so has part: feature:340765-340940:-1:exon
so has part: feature:338778-338896:-1:exon
so has part: feature:338604-338710:-1:exon
so has part: feature:335878-335998:-1:exon

XP_011543932.1
type: Protein
SIO_000068: ncbiprotein

position:335878:-1
position: 335878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:386368-386691:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:361405-361590:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:347590-347693:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:347234-347336:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:346701-346775:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:346174-346260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:345516-345672:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:341883-341931:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:341307-341396:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:340765-340940:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:338778-338896:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:338604-338710:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:335878-335998:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac-H3K4me1 hESC enhancers GRCh37_chrX:323668-324173 and GRCh37_chrY:273658-274173
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 362923..363438
location: region:362923-363438:1
so has part: feature:362923-363438:1:region

127138812
type: Gene
SIO_000068: ncbigene

position:362923:1
position: 362923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363438:1
position: 363438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362923-363438:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrY:273658-274173 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 362923..363438
location: region:362923-363438:1
so has part: feature:362923-363438:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:362923-363438:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrX:323668-324173 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 362933..363438
location: region:362933-363438:1
so has part: feature:362933-363438:1:region

position:362933:1
position: 362933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:362933-363438:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac-H3K4me1 hESC enhancer GRCh37_chrY:274174-274688
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 363439..363953
location: region:363439-363953:1
so has part: feature:363439-363953:1:region

127138849
type: Gene
SIO_000068: ncbigene

position:363439:1
position: 363439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:363953:1
position: 363953
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:363439-363953:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrY:274174-274688 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 363439..363953
location: region:363439-363953:1
so has part: feature:363439-363953:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:363439-363953:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:335885-336775
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 375150..376040
location: region:375150-376040:1
so has part: feature:375150-376040:1:region

127138813
type: Gene
SIO_000068: ncbigene

position:375150:1
position: 375150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:376040:1
position: 376040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:375150-376040:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrX:335885-336775 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 375150..376040
location: region:375150-376040:1
so has part: feature:375150-376040:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:375150-376040:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:357819-358704
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 397084..397969
location: region:397084-397969:1
so has part: feature:397084-397969:1:region

127138814
type: Gene
SIO_000068: ncbigene

position:397084:1
position: 397084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:397969:1
position: 397969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:397084-397969:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrX:357819-358704 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 397084..397969
location: region:397084-397969:1
so has part: feature:397084-397969:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:397084-397969:1:region

LOC102724521
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC102724521
note: uncharacterized LOC102724521; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 430021..472756
location: region:430021-472756:1
so has part: feature:430021-472756:1:exon
subclass of: SO_0000011

102724521
type: Gene
SIO_000068: ncbigene

position:430021:1
position: 430021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:472756:1
position: 472756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430021-472756:1:exon

LOC102724521
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC102724521
product: uncharacterized LOC102724521, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 83% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_001756015.2
SIO_010081: LOC102724521
subclass of: SO_0000673
so part of: LOC102724521
location: join(430021..430489,433837..434094,435577..435691,437604..437770,441314..441386,441620..441924,459458..460070,469540..469660,470712..470910,471517..472756)
location: region:430021-472756:1
so has part: feature:430021-430489:1:exon
so has part: feature:433837-434094:1:exon
so has part: feature:435577-435691:1:exon
so has part: feature:437604-437770:1:exon
so has part: feature:441314-441386:1:exon
so has part: feature:441620-441924:1:exon
so has part: feature:459458-460070:1:exon
so has part: feature:469540-469660:1:exon
so has part: feature:470712-470910:1:exon
so has part: feature:471517-472756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:430021-430489:1:exon

position:430489:1
position: 430489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:433837-434094:1:exon

position:433837:1
position: 433837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:434094:1
position: 434094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:435577-435691:1:exon

position:435577:1
position: 435577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:435691:1
position: 435691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:437604-437770:1:exon

position:437604:1
position: 437604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437770:1
position: 437770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:441314-441386:1:exon

position:441314:1
position: 441314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441386:1
position: 441386
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:441620-441924:1:exon

position:441620:1
position: 441620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:441924:1
position: 441924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:459458-460070:1:exon

position:459458:1
position: 459458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460070:1
position: 460070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:469540-469660:1:exon

position:469540:1
position: 469540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:469660:1
position: 469660
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:470712-470910:1:exon

position:470712:1
position: 470712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:470910:1
position: 470910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:471517-472756:1:exon

position:471517:1
position: 471517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC102724521
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC102724521
product: uncharacterized LOC102724521, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007068454.1
SIO_010081: LOC102724521
subclass of: SO_0000673
so part of: LOC102724521
location: join(430265..430489,433837..434094,435577..435691,437604..437770,441837..441924,442712..443396)
location: region:430265-443396:1
so has part: feature:430265-430489:1:exon
so has part: feature:433837-434094:1:exon
so has part: feature:435577-435691:1:exon
so has part: feature:437604-437770:1:exon
so has part: feature:441837-441924:1:exon
so has part: feature:442712-443396:1:exon

position:430265:1
position: 430265
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:443396:1
position: 443396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:430265-430489:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:433837-434094:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:435577-435691:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:437604-437770:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:441837-441924:1:exon

position:441837:1
position: 441837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:442712-443396:1:exon

position:442712:1
position: 442712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrX:396687-397186
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 435952..436451
location: region:435952-436451:1
so has part: feature:435952-436451:1:region

127138815
type: Gene
SIO_000068: ncbigene

position:435952:1
position: 435952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:436451:1
position: 436451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435952-436451:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrX:396687-397186 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 435952..436451
location: region:435952-436451:1
so has part: feature:435952-436451:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:435952-436451:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE-5 enhancer upstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: regulatory_interactions: SHOX
so part of: sequence
location: 437622..438215
location: region:437622-438215:1
so has part: feature:437622-438215:1:region

108353830
type: Gene
SIO_000068: ncbigene

position:437622:1
position: 437622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438215:1
position: 438215
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437622-438215:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:26631348]
note: CNE-5 PCR-amplified reporter construct fragment
function: enhancer in human U2OS osteosarcoma cells
so part of: sequence
location: 437622..438215
location: region:437622-438215:1
so has part: feature:437622-438215:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:437622-438215:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:19997128]
note: CNE-5 PCR-amplified reporter construct fragment
function: enhancer in ovo in chicken limb buds
so part of: sequence
location: 437622..438172
location: region:437622-438172:1
so has part: feature:437622-438172:1:region

position:438172:1
position: 438172
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437622-438172:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011074 more deeply conserved sub-region
so part of: sequence
location: 437749..437870
location: region:437749-437870:1
so has part: feature:437749-437870:1:region

position:437749:1
position: 437749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:437870:1
position: 437870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437749-437870:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011082 more deeply conserved sub-region
so part of: sequence
location: 437911..438073
location: region:437911-438073:1
so has part: feature:437911-438073:1:region

position:437911:1
position: 437911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:438073:1
position: 438073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:437911-438073:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: OCT4-NANOG hESC enhancers GRCh37_chrX:406609-407442 and GRCh37_chrY:356916-357447
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 445874..446712
location: region:445874-446712:1
so has part: feature:445874-446712:1:region

127138816
type: Gene
SIO_000068: ncbigene

position:445874:1
position: 445874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:446712:1
position: 446712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445874-446712:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: OCT4-NANOG hESC enhancer chrX:406609-407442 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 445874..446707
location: region:445874-446707:1
so has part: feature:445874-446707:1:region

position:446707:1
position: 446707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445874-446707:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: OCT4-NANOG hESC enhancer chrY:356916-357447 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 446181..446712
location: region:446181-446712:1
so has part: feature:446181-446712:1:region

position:446181:1
position: 446181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:446181-446712:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE-3 enhancer upstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: regulatory_interactions: SHOX
so part of: sequence
location: 499544..500343
location: region:499544-500343:1
so has part: feature:499544-500343:1:region

108353831
type: Gene
SIO_000068: ncbigene

position:499544:1
position: 499544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500343:1
position: 500343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499544-500343:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:26631348]
note: CNE-3 PCR-amplified reporter construct fragment
function: activates a SHOX promoter by reporter assays in human U2OS osteosarcoma cells {active_cell/tissue: U2OS}
so part of: sequence
location: 499544..499929
location: region:499544-499929:1
so has part: feature:499544-499929:1:region

position:499929:1
position: 499929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499544-499929:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:19997128]
note: CNE-3 PCR-amplified reporter construct fragment
function: activates a beta-globin promoter by in ovo reporter assays in chicken limb buds {active_cell/tissue: limb bud}
so part of: sequence
location: 499545..499929
location: region:499545-499929:1
so has part: feature:499545-499929:1:region

position:499545:1
position: 499545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499545-499929:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrX:460511-461078 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 499776..500343
location: region:499776-500343:1
so has part: feature:499776-500343:1:region

position:499776:1
position: 499776
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:499776-500343:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:461079-461645
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 500344..500910
location: region:500344-500910:1
so has part: feature:500344-500910:1:region

127138817
type: Gene
SIO_000068: ncbigene

position:500344:1
position: 500344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500910:1
position: 500910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:500344-500910:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrX:461079-461645 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 500344..500910
location: region:500344-500910:1
so has part: feature:500344-500910:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:500344-500910:1:region

FABP5P13
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: FABP5L13
gene: FABP5P13
gene synonym: FABP5L13
note: fatty acid binding protein 5 pseudogene 13; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(523741..524101)
location: region:523741-524101:-1
so has part: feature:523741-524101:-1:exon

106480712
type: Gene
SIO_000068: ncbigene

HGNC:38717
type: HGNC
SIO_000068: hgnc

position:523741:-1
position: 523741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:524101:-1
position: 524101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:523741-524101:-1:exon

KRT18P53
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: KRT18P53
note: keratin 18 pseudogene 53; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(545236..545352)
location: region:545236-545352:-1
so has part: feature:545236-545352:-1:exon

106478925
type: Gene
SIO_000068: ncbigene

HGNC:38714
type: HGNC
SIO_000068: hgnc

position:545236:-1
position: 545236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545352:-1
position: 545352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:545236-545352:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE-2 enhancer upstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: regulatory_interactions: SHOX
so part of: sequence
location: 555875..556494
location: region:555875-556494:1
so has part: feature:555875-556494:1:region

108353832
type: Gene
SIO_000068: ncbigene

position:555875:1
position: 555875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556494:1
position: 556494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555875-556494:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:19997128, PMID:26631348]
note: CNE-2 PCR-amplified reporter construct fragment
function: enhancer in ovo in chicken limb buds, and in human U2OS osteosarcoma cells
so part of: sequence
location: 555875..556494
location: region:555875-556494:1
so has part: feature:555875-556494:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:555875-556494:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011089 more deeply conserved sub-region
so part of: sequence
location: 555932..556231
location: region:555932-556231:1
so has part: feature:555932-556231:1:region

position:555932:1
position: 555932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:556231:1
position: 556231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:555932-556231:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chrY:534047-534914
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 623312..624179
location: region:623312-624179:1
so has part: feature:623312-624179:1:region

127138850
type: Gene
SIO_000068: ncbigene

position:623312:1
position: 623312
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624179:1
position: 624179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623312-624179:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: OCT4-NANOG-H3K4me1 hESC enhancer chrY:534047-534914 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 623312..624179
location: region:623312-624179:1
so has part: feature:623312-624179:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:623312-624179:1:region

SHOX
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: short stature homeobox; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 624344..659411
location: region:624344-659411:1
so has part: feature:624344-659411:1:exon
subclass of: SO_0000010

6473
type: Gene
SIO_000068: ncbigene

HGNC:10853
type: HGNC
SIO_000068: hgnc

400020
type: OMIM
SIO_000068: omim

position:624344:1
position: 624344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:659411:1
position: 659411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:624344-659411:1:exon

SHOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
product: short stature homeobox, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_006883.2
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(624344..624602,630466..631174,634618..634826,640821..640878,640999..641087,658785..659411)
location: region:624344-659411:1
so has part: feature:624344-624602:1:exon
so has part: feature:630466-631174:1:exon
so has part: feature:634618-634826:1:exon
so has part: feature:640821-640878:1:exon
so has part: feature:640999-641087:1:exon
so has part: feature:658785-659411:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:624344-624602:1:exon

position:624602:1
position: 624602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:630466-631174:1:exon

position:630466:1
position: 630466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631174:1
position: 631174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634618-634826:1:exon

position:634618:1
position: 634618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634826:1
position: 634826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:640821-640878:1:exon

position:640821:1
position: 640821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:640878:1
position: 640878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:640999-641087:1:exon

position:640999:1
position: 640999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641087:1
position: 641087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:658785-659411:1:exon

position:658785:1
position: 658785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHOX
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
product: short stature homeobox, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_000451.4
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(630791..631174,634618..634826,640821..640878,640999..641087,644391..651584)
location: region:630791-651584:1
so has part: feature:630791-631174:1:exon
so has part: feature:634618-634826:1:exon
so has part: feature:640821-640878:1:exon
so has part: feature:640999-641087:1:exon
so has part: feature:644391-651584:1:exon

position:630791:1
position: 630791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:651584:1
position: 651584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630791-631174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634618-634826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640821-640878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640999-641087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644391-651584:1:exon

position:644391:1
position: 644391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SHOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: isoform SHOXb is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: short stature homeobox protein isoform SHOXb
translation: MEELTAFVSKSFDQKSKDGNGGGGGGGGKKDSITYREVLESGLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMPFQQMEFCSCRPGWSIMA
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(630898..631174,634618..634826,640821..640878,640999..641087,658785..658829)
location: region:630898-658829:1
so has part: feature:630898-631174:1:exon
so has part: feature:634618-634826:1:exon
so has part: feature:640821-640878:1:exon
so has part: feature:640999-641087:1:exon
so has part: feature:658785-658829:1:exon

NP_006874.1
type: Protein
SIO_000068: ncbiprotein

CCDS14106.1
type: CCDS
SIO_000068: ccds

position:630898:1
position: 630898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:658829:1
position: 658829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630898-631174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634618-634826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640821-640878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640999-641087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:658785-658829:1:exon

SHOX
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: propagated from UniProtKB/Swiss-Prot (O15266.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: 630898..630999
location: region:630898-630999:1
so has part: feature:630898-630999:1:exon

position:630999:1
position: 630999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630898-630999:1:exon

SHOX
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: propagated from UniProtKB/Swiss-Prot (O15266.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: 634638..634697
location: region:634638-634697:1
so has part: feature:634638-634697:1:exon

position:634638:1
position: 634638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634697:1
position: 634697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634638-634697:1:exon

SHOX
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: isoform SHOXa is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: short stature homeobox protein isoform SHOXa
translation: MEELTAFVSKSFDQKSKDGNGGGGGGGGKKDSITYREVLESGLARSRELGTSDSSLQDITEGGGHCPVHLFKDHVDNDKEKLKEFGTARVAEGIYECKEKREDVKSEDEDGQTKLKQRRSRTNFTLEQLNELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGTANHLDACRVAPYVNMGALRMPFQQVQAQLQLEGVAHAHPHLHPHLAAHAPYLMFPPPPFGLPIASLAESASAAAVVAAAAKSNSKNSSIADLRLKARKHAEALGL
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: join(630898..631174,634618..634826,640821..640878,640999..641087,644391..644636)
location: region:630898-644636:1
so has part: feature:630898-631174:1:exon
so has part: feature:634618-634826:1:exon
so has part: feature:640821-640878:1:exon
so has part: feature:640999-641087:1:exon
so has part: feature:644391-644636:1:exon

NP_000442.1
type: Protein
SIO_000068: ncbiprotein

CCDS14107.1
type: CCDS
SIO_000068: ccds

position:644636:1
position: 644636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:630898-631174:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634618-634826:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:640821-640878:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:640999-641087:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:644391-644636:1:exon

SHOX
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: propagated from UniProtKB/Swiss-Prot (O15266.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: 630898..630999
location: region:630898-630999:1
so has part: feature:630898-630999:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:630898-630999:1:exon

SHOX
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: propagated from UniProtKB/Swiss-Prot (O15266.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: 634638..634697
location: region:634638-634697:1
so has part: feature:634638-634697:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:634638-634697:1:exon

SHOX
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: propagated from UniProtKB/Swiss-Prot (O15266.1); Region: SH3-binding. /evidence=ECO:0000255
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: 644481..644504
location: region:644481-644504:1
so has part: feature:644481-644504:1:exon

position:644481:1
position: 644481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644504:1
position: 644504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644481-644504:1:exon

SHOX
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: GCFX
alternative label: PHOG
alternative label: SHOXY
alternative label: SS
gene: SHOX
gene synonym: GCFX; PHOG; SHOXY; SS
note: propagated from UniProtKB/Swiss-Prot (O15266.1); Region: OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138
SIO_010081: SHOX
subclass of: SO_0000673
so part of: SHOX
location: 644577..644618
location: region:644577-644618:1
so has part: feature:644577-644618:1:exon

position:644577:1
position: 644577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:644618:1
position: 644618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:644577-644618:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: meiotic recombination hotspot SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 633053..636275
location: region:633053-636275:1
so has part: feature:633053-636275:1:region

107652445
type: Gene
SIO_000068: ncbigene

position:633053:1
position: 633053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:636275:1
position: 636275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633053-636275:1:region

misc_recomb
type: Miscellaneous Recombination Site
subclass of: SO_0000298
RO_0002162: 9606
recombination class: meiotic
experiment: EXISTENCE:chromatin immunoprecipitation-seq evidence [ECO:0000229][PMID:25395542]
note: meiotic double-strand break mapped by DNA meiotic recombinase 1 chromatin immunoprecipitation followed by single-stranded DNA enrichment and sequencing in the germ cells of some male individuals with the PRDM9 A/A, PRDM9 A/B and PRDM9 A/C genotypes
so part of: sequence
location: 633053..636134
location: region:633053-636134:1
so has part: feature:633053-636134:1:region

position:636134:1
position: 636134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633053-636134:1:region

misc_recomb
type: Miscellaneous Recombination Site
subclass of: SO_0000298
RO_0002162: 9606
recombination class: meiotic
experiment: EXISTENCE:DNA detection assay evidence [ECO:0005519][PMID:12089524]
note: crossovers mapped in sperm cells of males of northern European ancestry
so part of: sequence
location: 633276..636275
location: region:633276-636275:1
so has part: feature:633276-636275:1:region

position:633276:1
position: 633276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:633276-636275:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
note: nucleotide motif; similarity to the predicted 16-mer PRDM9 C-type binding motif, CCNCNNTNNNCNTNNC; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 634354..634370
location: region:634354-634370:1
so has part: feature:634354-634370:1:region

position:634354:1
position: 634354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:634370:1
position: 634370
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:634354-634370:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrY:639405-639905
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 728670..729170
location: region:728670-729170:1
so has part: feature:728670-729170:1:region

127138851
type: Gene
SIO_000068: ncbigene

position:728670:1
position: 728670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:729170:1
position: 729170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:728670-729170:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrY:639405-639905 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 728670..729170
location: region:728670-729170:1
so has part: feature:728670-729170:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:728670-729170:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrY:644837-645338
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 734102..734603
location: region:734102-734603:1
so has part: feature:734102-734603:1:region

127138852
type: Gene
SIO_000068: ncbigene

position:734102:1
position: 734102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:734603:1
position: 734603
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:734102-734603:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrY:644837-645338 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 734102..734603
location: region:734102-734603:1
so has part: feature:734102-734603:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:734102-734603:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE4 enhancer downstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: regulatory_interactions: SHOX
so part of: sequence
location: 753349..754018
location: region:753349-754018:1
so has part: feature:753349-754018:1:region

108383234
type: Gene
SIO_000068: ncbigene

position:753349:1
position: 753349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754018:1
position: 754018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753349-754018:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:21731768]
note: CNE4 PCR-amplified transgene fragment
function: enhancer in day 2 and day 3 zebrafish embryo fin, cardiovascular system, brain, skin, muscle, notochord and ear
so part of: sequence
location: 753349..754018
location: region:753349-754018:1
so has part: feature:753349-754018:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:753349-754018:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:17200153, PMID:26631348, PMID:22791839]
note: CNE4 PCR-amplified reporter construct fragment
function: enhancer in ovo in chicken limb buds, and in human U2OS osteosarcoma cells
so part of: sequence
location: 753350..754004
location: region:753350-754004:1
so has part: feature:753350-754004:1:region

position:753350:1
position: 753350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:754004:1
position: 754004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753350-754004:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011095 more deeply conserved sub-region
so part of: sequence
location: 753629..753714
location: region:753629-753714:1
so has part: feature:753629-753714:1:region

position:753629:1
position: 753629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753714:1
position: 753714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753629-753714:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:21731768]
note: CRCNE00011095 PCR-amplified transgene fragment
function: enhancer in day 2 and day 3 zebrafish embryo skin, with some activity in fin, muscle and heart
so part of: sequence
location: 753636..753735
location: region:753636-753735:1
so has part: feature:753636-753735:1:region

position:753636:1
position: 753636
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:753735:1
position: 753735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:753636-753735:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE5 enhancer downstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: regulatory_interactions: SHOX
so part of: sequence
location: 790089..791276
location: region:790089-791276:1
so has part: feature:790089-791276:1:region

108383235
type: Gene
SIO_000068: ncbigene

position:790089:1
position: 790089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791276:1
position: 791276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790089-791276:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:23575226]
note: CNE5 PCR-amplified transgene fragment
function: activates a beta-globin promoter in mouse E11.5-E12.5 neural tissue, especially in hindbrain {active_cell/tissue: hindbrain(E11.5-E12.5) | neural(E11.5-E12.5)}
so part of: sequence
location: 790089..791115
location: region:790089-791115:1
so has part: feature:790089-791115:1:region

position:791115:1
position: 791115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790089-791115:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:17200153, PMID:22791839, PMID:26631348]
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:21731768]
note: CNE5 reporter construct fragment
function: activates a SHOX or beta-globin promoter in ovo in chicken limb buds, in day 2 and day 3 zebrafish embryo brain, skin, heart, fins, muscle, notochord and eye, and in human U2OS osteosarcoma cells {active_cell/tissue: limb bud | brain(d2-d3) | skin(d2-d3) | heart(d2-d3) | fin(d2-d3) | muscle(d2-d3) | notochord(d2-d3) | eye(d2-d3) | U2OS}
so part of: sequence
location: 790090..791115
location: region:790090-791115:1
so has part: feature:790090-791115:1:region

position:790090:1
position: 790090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790090-791115:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011075 more deeply conserved sub-region
so part of: sequence
location: 790100..790149
location: region:790100-790149:1
so has part: feature:790100-790149:1:region

position:790100:1
position: 790100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790149:1
position: 790149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790100-790149:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011096 more deeply conserved sub-region
so part of: sequence
location: 790287..790346
location: region:790287-790346:1
so has part: feature:790287-790346:1:region

position:790287:1
position: 790287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790346:1
position: 790346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790287-790346:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011097 more deeply conserved sub-region
so part of: sequence
location: 790450..790736
location: region:790450-790736:1
so has part: feature:790450-790736:1:region

position:790450:1
position: 790450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790736:1
position: 790736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790450-790736:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG-H3K27ac-H3K4me1 hESC enhancer chrY:701295-702011 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 790560..791276
location: region:790560-791276:1
so has part: feature:790560-791276:1:region

position:790560:1
position: 790560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790560-791276:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011098 more deeply conserved sub-region
so part of: sequence
location: 790786..790950
location: region:790786-790950:1
so has part: feature:790786-790950:1:region

position:790786:1
position: 790786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790950:1
position: 790950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790786-790950:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011099 more deeply conserved sub-region
so part of: sequence
location: 790963..791022
location: region:790963-791022:1
so has part: feature:790963-791022:1:region

position:790963:1
position: 790963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791022:1
position: 791022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:790963-791022:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrX:753798-754298
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 793063..793563
location: region:793063-793563:1
so has part: feature:793063-793563:1:region

127138818
type: Gene
SIO_000068: ncbigene

position:793063:1
position: 793063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793563:1
position: 793563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:793063-793563:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrX:753798-754298 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 793063..793563
location: region:793063-793563:1
so has part: feature:793063-793563:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:793063-793563:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE6 enhancer downstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 805129..805625
location: region:805129-805625:1
so has part: feature:805129-805625:1:region

108383236
type: Gene
SIO_000068: ncbigene

position:805129:1
position: 805129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805625:1
position: 805625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805129-805625:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:21731768]
note: CNE6 PCR-amplified transgene fragment
function: enhancer in diverse tissues in zebrafish embryos, especially heart and ear at day 2, and muscle, ear, eye and heart at day 3
so part of: sequence
location: 805129..805625
location: region:805129-805625:1
so has part: feature:805129-805625:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:805129-805625:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011100 more deeply conserved sub-region
so part of: sequence
location: 805374..805462
location: region:805374-805462:1
so has part: feature:805374-805462:1:region

position:805374:1
position: 805374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805462:1
position: 805462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:805374-805462:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: SHOX downstream enhancer, distal recombination region
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: recombination_partner: LOC108251803
so part of: sequence
location: 819353..820444
location: region:819353-820444:1
so has part: feature:819353-820444:1:region

108251802
type: Gene
SIO_000068: ncbigene

position:819353:1
position: 819353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820444:1
position: 820444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819353-820444:1:region

misc_recomb
type: Miscellaneous Recombination Site
subclass of: SO_0000298
RO_0002162: 9606
recombination class: meiotic
experiment: EXISTENCE:chromatin immunoprecipitation-seq evidence [ECO:0000229][PMID:25395542]
note: meiotic double-strand break mapped by DNA meiotic recombinase 1 chromatin immunoprecipitation followed by single-stranded DNA enrichment and sequencing on the X chromosome in the germ cells of some male individuals with the PRDM9 A/A genotype
so part of: sequence
location: 819353..820259
location: region:819353-820259:1
so has part: feature:819353-820259:1:region

position:820259:1
position: 820259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819353-820259:1:region

misc_recomb
type: Miscellaneous Recombination Site
subclass of: SO_0000298
RO_0002162: 9606
recombination class: meiotic
experiment: EXISTENCE:chromatin immunoprecipitation-seq evidence [ECO:0000229][PMID:25395542]
note: meiotic double-strand break mapped by DNA meiotic recombinase 1 chromatin immunoprecipitation followed by single-stranded DNA enrichment and sequencing on the Y chromosome in the germ cells of some male individuals with the PRDM9 A/A and PRDM9 A/B genotypes
so part of: sequence
location: 819454..820444
location: region:819454-820444:1
so has part: feature:819454-820444:1:region

position:819454:1
position: 819454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819454-820444:1:region

misc_recomb
type: Miscellaneous Recombination Site
subclass of: SO_0000298
RO_0002162: 9606
recombination class: chromosome_breakpoint
experiment: EXISTENCE:nucleotide sequencing assay evidence [ECO:0000219][PMID:22791839]
note: distal breakpoint sub-region, recombines with the proximal breakpoint sub-region within the SHOX downstream enhancer, proximal recombination region, resulting in a recurrent 47.5 kb deletion
so part of: sequence
location: 819814..819815
location: region:819814-819815:1
so has part: feature:819814-819815:1:region

position:819814:1
position: 819814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:819815:1
position: 819815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819814-819815:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE7 enhancer downstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: regulatory_interactions: SHOX
so part of: sequence
location: 819846..820500
location: region:819846-820500:1
so has part: feature:819846-820500:1:region

108383238
type: Gene
SIO_000068: ncbigene

position:819846:1
position: 819846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820500:1
position: 820500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819846-820500:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:22791839]
note: ECR1 PCR-amplified reporter construct fragment
function: enhancer in human U2OS osteosarcoma cells
so part of: sequence
location: 819846..820500
location: region:819846-820500:1
so has part: feature:819846-820500:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:819846-820500:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:21731768]
note: CNE7 PCR-amplified transgene fragment
function: enhancer in zebrafish embryos in day 2 skin, and in day 2 and day 3 brain, fin and cardiovascular system
so part of: sequence
location: 819965..820485
location: region:819965-820485:1
so has part: feature:819965-820485:1:region

position:819965:1
position: 819965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820485:1
position: 820485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:819965-820485:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011101 more deeply conserved sub-region
so part of: sequence
location: 820049..820220
location: region:820049-820220:1
so has part: feature:820049-820220:1:region

position:820049:1
position: 820049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820220:1
position: 820220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820049-820220:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011102 more deeply conserved sub-region
so part of: sequence
location: 820288..820397
location: region:820288-820397:1
so has part: feature:820288-820397:1:region

position:820288:1
position: 820288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:820397:1
position: 820397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:820288-820397:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE8 enhancer downstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 850815..851565
location: region:850815-851565:1
so has part: feature:850815-851565:1:region

108410391
type: Gene
SIO_000068: ncbigene

position:850815:1
position: 850815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851565:1
position: 851565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:850815-851565:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:21731768]
note: CNE8 PCR-amplified transgene fragment
function: enhancer in day 2 and day 3 zebrafish embryo skin, fin, central nervous system, muscle and heart
so part of: sequence
location: 850815..851565
location: region:850815-851565:1
so has part: feature:850815-851565:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:850815-851565:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011103 more deeply conserved sub-region
so part of: sequence
location: 851010..851316
location: region:851010-851316:1
so has part: feature:851010-851316:1:region

position:851010:1
position: 851010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:851316:1
position: 851316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:851010-851316:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: CNE9 enhancer downstream of SHOX
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: regulatory_interactions: SHOX
so part of: sequence
location: 856168..874963
location: region:856168-874963:1
so has part: feature:856168-874963:1:region

108410392
type: Gene
SIO_000068: ncbigene

position:856168:1
position: 856168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874963:1
position: 874963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:856168-874963:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:23575226]
note: 18796 nt extended CNE9 fragment from 19kbCNE9-betalacZ transgene
function: enhancer in mouse E13.5 embryo fore and hind limbs, mostly restricted to the zeugopodium, also weakly in hindbrain, and in E13.5-14.5 radius and ulna mesenchyme
so part of: sequence
location: 856168..874963
location: region:856168-874963:1
so has part: feature:856168-874963:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:856168-874963:1:region

misc_recomb
type: Miscellaneous Recombination Site
subclass of: SO_0000298
RO_0002162: 9606
recombination class: meiotic
experiment: EXISTENCE:chromatin immunoprecipitation-seq evidence [ECO:0000229][PMID:25395542]
note: meiotic double-strand break mapped by DNA meiotic recombinase 1 chromatin immunoprecipitation followed by single-stranded DNA enrichment and sequencing on the Y chromosome in the germ cells of some male individuals with the PRDM9 A/A genotype
so part of: sequence
location: 866905..867930
location: region:866905-867930:1
so has part: feature:866905-867930:1:region

108251803
type: Gene
SIO_000068: ncbigene

position:866905:1
position: 866905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867930:1
position: 867930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:866905-867930:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: SHOX downstream enhancer, proximal recombination region
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
function: recombination_partner: LOC108251802
so part of: sequence
location: 866905..867930
location: region:866905-867930:1
so has part: feature:866905-867930:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:866905-867930:1:region

mobile_element
type: Mobile Element
subclass of: SO_0001037
RO_0002162: 9606
note: direction; reverse; Derived by automated computational analysis using gene prediction method: RefSeqFE.
rpt family: L1
rpt type: dispersed
mobile element type: retrotransposon:L1PA3
so part of: sequence
location: 867247..867422
location: region:867247-867422:1
so has part: feature:867247-867422:1:region

position:867247:1
position: 867247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867422:1
position: 867422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867247-867422:1:region

misc_recomb
type: Miscellaneous Recombination Site
subclass of: SO_0000298
RO_0002162: 9606
recombination class: chromosome_breakpoint
experiment: EXISTENCE:nucleotide sequencing assay evidence [ECO:0000219][PMID:22791839]
note: proximal breakpoint sub-region, recombines with the distal breakpoint sub-region within the SHOX downstream enhancer, distal recombination region, resulting in a recurrent 47.5 kb deletion
so part of: sequence
location: 867357..867358
location: region:867357-867358:1
so has part: feature:867357-867358:1:region

position:867357:1
position: 867357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867358:1
position: 867358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867357-867358:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
note: nucleotide motif; similarity to the predicted 13-mer PRDM9 A binding motif (LD hotspot motif), CCNCCNTNNCCNC; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 867379..867391
location: region:867379-867391:1
so has part: feature:867379-867391:1:region

position:867379:1
position: 867379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:867391:1
position: 867391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:867379-867391:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:21731768]
note: CNE9 PCR-amplified transgene fragment
function: enhancer in day 2 and day 3 zebrafish embryo eye, fin and blood
so part of: sequence
location: 874005..874837
location: region:874005-874837:1
so has part: feature:874005-874837:1:region

position:874005:1
position: 874005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874837:1
position: 874837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874005-874837:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:transgenic organism evidence [ECO:0001131][PMID:23575226]
note: CNE9 fragment from short CNE9-betalacZ transgene
function: enhancer in mouse E12.5 neural tissues, including hindbrain and neural tube
so part of: sequence
location: 874009..874833
location: region:874009-874833:1
so has part: feature:874009-874833:1:region

position:874009:1
position: 874009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874833:1
position: 874833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874009-874833:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:16385461, PMID:17200153, PMID:22791839, PMID:26631348]
note: CNE9 or ECS4 reporter construct fragment
function: enhancer in ovo in chicken limb buds, and in human U2OS osteosarcoma cells
so part of: sequence
location: 874011..874832
location: region:874011-874832:1
so has part: feature:874011-874832:1:region

position:874011:1
position: 874011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874832:1
position: 874832
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874011-874832:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011104 more deeply conserved sub-region
so part of: sequence
location: 874456..874604
location: region:874456-874604:1
so has part: feature:874456-874604:1:region

position:874456:1
position: 874456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874604:1
position: 874604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874456-874604:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
experiment: EXISTENCE:sequence alignment evidence [ECO:0000200][PMID:21731768]
note: conserved region; CRCNE00011105 more deeply conserved sub-region
so part of: sequence
location: 874655..874699
location: region:874655-874699:1
so has part: feature:874655-874699:1:region

position:874655:1
position: 874655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:874699:1
position: 874699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:874655-874699:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrX:941763-942262
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 981028..981527
location: region:981028-981527:1
so has part: feature:981028-981527:1:region

127138819
type: Gene
SIO_000068: ncbigene

position:981028:1
position: 981028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:981527:1
position: 981527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:981028-981527:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrX:941763-942262 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 981028..981527
location: region:981028-981527:1
so has part: feature:981028-981527:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:981028-981527:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac hESC enhancers GRCh37_chrX:958477-959001 and GRCh37_chrY:908292-908926
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 997557..998266
location: region:997557-998266:1
so has part: feature:997557-998266:1:region

127138820
type: Gene
SIO_000068: ncbigene

position:997557:1
position: 997557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998266:1
position: 998266
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997557-998266:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac hESC enhancer chrY:908292-908926 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 997557..998191
location: region:997557-998191:1
so has part: feature:997557-998191:1:region

position:998191:1
position: 998191
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997557-998191:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac hESC enhancer chrX:958477-959001 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 997742..998266
location: region:997742-998266:1
so has part: feature:997742-998266:1:region

position:997742:1
position: 997742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:997742-998266:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac hESC enhancer GRCh37_chrX:959002-959525
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 998267..998790
location: region:998267-998790:1
so has part: feature:998267-998790:1:region

127138821
type: Gene
SIO_000068: ncbigene

position:998267:1
position: 998267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998790:1
position: 998790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:998267-998790:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac hESC enhancer chrX:959002-959525 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 998267..998790
location: region:998267-998790:1
so has part: feature:998267-998790:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:998267-998790:1:region

RPL14P5
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: RPL14P5
note: ribosomal protein L14 pseudogene 5; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(1009720..1010100)
location: region:1009720-1010100:-1
so has part: feature:1009720-1010100:-1:exon

442442
type: Gene
SIO_000068: ncbigene

HGNC:37720
type: HGNC
SIO_000068: hgnc

position:1009720:-1
position: 1009720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1010100:-1
position: 1010100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1009720-1010100:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: NANOG hESC enhancer GRCh37_chrX:1104952-1105491
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1081837..1082376
location: region:1081837-1082376:1
so has part: feature:1081837-1082376:1:region

127138822
type: Gene
SIO_000068: ncbigene

position:1081837:1
position: 1081837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1082376:1
position: 1082376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1081837-1082376:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG hESC enhancer chrX:1104952-1105491 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 1081837..1082376
location: region:1081837-1082376:1
so has part: feature:1081837-1082376:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:1081837-1082376:1:region

LOC100418703
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC100418703
note: repetin pseudogene; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: 1127409..1128785
location: region:1127409-1128785:1
so has part: feature:1127409-1128785:1:exon

100418703
type: Gene
SIO_000068: ncbigene

position:1127409:1
position: 1127409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1128785:1
position: 1128785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1127409-1128785:1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrX:1252013-1252514
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1151860..1152361
location: region:1151860-1152361:1
so has part: feature:1151860-1152361:1:region

127138823
type: Gene
SIO_000068: ncbigene

position:1151860:1
position: 1151860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152361:1
position: 1152361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1151860-1152361:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrX:1252013-1252514 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 1151860..1152361
location: region:1151860-1152361:1
so has part: feature:1151860-1152361:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:1151860-1152361:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K4me1 hESC enhancer GRCh37_chrX:1252515-1253014
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1152362..1152861
location: region:1152362-1152861:1
so has part: feature:1152362-1152861:1:region

127138824
type: Gene
SIO_000068: ncbigene

position:1152362:1
position: 1152362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152861:1
position: 1152861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152362-1152861:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K4me1 hESC enhancer chrX:1252515-1253014 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 1152362..1152861
location: region:1152362-1152861:1
so has part: feature:1152362-1152861:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:1152362-1152861:1:region

LOC652608
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC652608
note: 60S ribosomal protein L6-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1172583..1175114
location: region:1172583-1175114:1
so has part: feature:1172583-1175114:1:exon

652608
type: Gene
SIO_000068: ncbigene

position:1172583:1
position: 1172583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1175114:1
position: 1175114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172583-1175114:1:exon

LOC652608
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC652608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC652608
subclass of: SO_0000673
so part of: LOC652608
location: 1172583..1172950
location: region:1172583-1172950:1
so has part: feature:1172583-1172950:1:exon

position:1172950:1
position: 1172950
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1172583-1172950:1:exon

LOC652608
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC652608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC652608
subclass of: SO_0000673
so part of: LOC652608
location: 1173612..1173687
location: region:1173612-1173687:1
so has part: feature:1173612-1173687:1:exon

position:1173612:1
position: 1173612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1173687:1
position: 1173687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1173612-1173687:1:exon

LOC652608
type: Exon
subclass of: SO_0000147
RO_0002162: 9606
gene: LOC652608
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC652608
subclass of: SO_0000673
so part of: LOC652608
location: 1174729..1175114
location: region:1174729-1175114:1
so has part: feature:1174729-1175114:1:exon

position:1174729:1
position: 1174729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1174729-1175114:1:exon

CRLF2
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: cytokine receptor like factor 2; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1190490..1212649)
location: region:1190490-1212649:-1
so has part: feature:1190490-1212649:-1:exon
subclass of: SO_0000010

64109
type: Gene
SIO_000068: ncbigene

HGNC:14281
type: HGNC
SIO_000068: hgnc

400023
type: OMIM
SIO_000068: omim

position:1190490:-1
position: 1190490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212649:-1
position: 1212649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190490-1212649:-1:exon

CRLF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
product: cytokine receptor like factor 2, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001012288.3
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(1190490..1191160,1193218..1193302,1196780..1196900,1198562..1198724,1202402..1202535,1206433..1206599,1212556..1212649))
location: region:1190490-1212649:-1
so has part: feature:1212556-1212649:-1:exon
so has part: feature:1206433-1206599:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198562-1198724:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190490-1191160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212556-1212649:-1:exon

position:1212556:-1
position: 1212556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1206433-1206599:-1:exon

position:1206433:-1
position: 1206433
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206599:-1
position: 1206599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1202402-1202535:-1:exon

position:1202402:-1
position: 1202402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202535:-1
position: 1202535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1198562-1198724:-1:exon

position:1198562:-1
position: 1198562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198724:-1
position: 1198724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1196780-1196900:-1:exon

position:1196780:-1
position: 1196780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196900:-1
position: 1196900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1193218-1193302:-1:exon

position:1193218:-1
position: 1193218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193302:-1
position: 1193302
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1190490-1191160:-1:exon

position:1191160:-1
position: 1191160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRLF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
product: cytokine receptor like factor 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_011545634.3
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(1190490..1191160,1193218..1193302,1196780..1196900,1198562..1198724,1202402..1202535,1206433..1206599,1208806..1208905,1212556..1212649))
location: region:1190490-1212649:-1
so has part: feature:1212556-1212649:-1:exon
so has part: feature:1208806-1208905:-1:exon
so has part: feature:1206433-1206599:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198562-1198724:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190490-1191160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212556-1212649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208806-1208905:-1:exon

position:1208806:-1
position: 1208806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208905:-1
position: 1208905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206433-1206599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202402-1202535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198562-1198724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196780-1196900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193218-1193302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190490-1191160:-1:exon

CRLF2
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
product: cytokine receptor like factor 2, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_110830.2
SIO_010081: CRLF2
so part of: CRLF2
location: complement(join(1190490..1191160,1193218..1193302,1196780..1196900,1198801..1199145,1202402..1202535,1206433..1206599,1208806..1208905,1212556..1212649))
location: region:1190490-1212649:-1
so has part: feature:1212556-1212649:-1:exon
so has part: feature:1208806-1208905:-1:exon
so has part: feature:1206433-1206599:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198801-1199145:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190490-1191160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212556-1212649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208806-1208905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1206433-1206599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202402-1202535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198801-1199145:-1:exon

position:1198801:-1
position: 1198801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1199145:-1
position: 1199145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1196780-1196900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193218-1193302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190490-1191160:-1:exon

CRLF2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
product: cytokine receptor like factor 2, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_022148.4
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(1190490..1191160,1193218..1193302,1196780..1196900,1198562..1198724,1202402..1202535,1206433..1206599,1208806..1208908,1212556..1212649))
location: region:1190490-1212649:-1
so has part: feature:1212556-1212649:-1:exon
so has part: feature:1208806-1208908:-1:exon
so has part: feature:1206433-1206599:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198562-1198724:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190490-1191160:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1212556-1212649:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208806-1208908:-1:exon

position:1208908:-1
position: 1208908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1206433-1206599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202402-1202535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198562-1198724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196780-1196900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193218-1193302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190490-1191160:-1:exon

CRLF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytokine receptor-like factor 2 isoform X1
translation: MGRLVLLWGAAVFLLGGWMALGQGGAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHYRFNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPSSPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(1190897..1191160,1193218..1193302,1196780..1196900,1198562..1198724,1202402..1202535,1206433..1206599,1208806..1208905,1212556..1212634))
location: region:1190897-1212634:-1
so has part: feature:1212556-1212634:-1:exon
so has part: feature:1208806-1208905:-1:exon
so has part: feature:1206433-1206599:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198562-1198724:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190897-1191160:-1:exon

XP_011543936.1
type: Protein
SIO_000068: ncbiprotein

position:1190897:-1
position: 1190897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212634:-1
position: 1212634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212556-1212634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208806-1208905:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1206433-1206599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202402-1202535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198562-1198724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196780-1196900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193218-1193302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190897-1191160:-1:exon

CRLF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: isoform 1 precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cytokine receptor-like factor 2 isoform 1 precursor
translation: MGRLVLLWGAAVFLLGGWMALGQGGAAEGVQIQIIYFNLETVQVTWNASKYSRTNLTFHYRFNGDEAYDQCTNYLLQEGHTSGCLLDAEQRDDILYFSIRNGTHPVFTASRWMVYYLKPSSPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(1190897..1191160,1193218..1193302,1196780..1196900,1198562..1198724,1202402..1202535,1206433..1206599,1208806..1208908,1212556..1212634))
location: region:1190897-1212634:-1
so has part: feature:1212556-1212634:-1:exon
so has part: feature:1208806-1208908:-1:exon
so has part: feature:1206433-1206599:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198562-1198724:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190897-1191160:-1:exon

NP_071431.2
type: Protein
SIO_000068: ncbiprotein

CCDS75945.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1212556-1212634:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208806-1208908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1206433-1206599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202402-1202535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198562-1198724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196780-1196900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193218-1193302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190897-1191160:-1:exon

CRLF2
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1212569..1212634)
location: region:1212569-1212634:-1
so has part: feature:1212569-1212634:-1:exon

position:1212569:-1
position: 1212569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212569-1212634:-1:exon

CRLF2
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
product: Cytokine receptor-like factor 2. /id=PRO_0000011041
note: propagated from UniProtKB/Swiss-Prot (Q9HC73.1)
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(1190900..1191160,1193218..1193302,1196780..1196900,1198562..1198724,1202402..1202535,1206433..1206599,1208806..1208908,1212556..1212568))
location: region:1190900-1212568:-1
so has part: feature:1212556-1212568:-1:exon
so has part: feature:1208806-1208908:-1:exon
so has part: feature:1206433-1206599:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198562-1198724:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190900-1191160:-1:exon

position:1190900:-1
position: 1190900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1212568:-1
position: 1212568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1212556-1212568:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1208806-1208908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1206433-1206599:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202402-1202535:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1198562-1198724:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1196780-1196900:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1193218-1193302:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1190900-1191160:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9HC73.1); glycosylation site
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1208847..1208849)
location: region:1208847-1208849:-1
so has part: feature:1208847-1208849:-1:exon

position:1208847:-1
position: 1208847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208849:-1
position: 1208849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208847-1208849:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9HC73.1); glycosylation site
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1208823..1208825)
location: region:1208823-1208825:-1
so has part: feature:1208823-1208825:-1:exon

position:1208823:-1
position: 1208823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1208825:-1
position: 1208825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1208823-1208825:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9HC73.1); glycosylation site
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1206479..1206481)
location: region:1206479-1206481:-1
so has part: feature:1206479-1206481:-1:exon

position:1206479:-1
position: 1206479
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1206481:-1
position: 1206481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206479-1206481:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q9HC73.1); glycosylation site
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1198701..1198703)
location: region:1198701-1198703:-1
so has part: feature:1198701-1198703:-1:exon

position:1198701:-1
position: 1198701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198703:-1
position: 1198703
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198701-1198703:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: propagated from UniProtKB/Swiss-Prot (Q9HC73.1); Region: WSXWS motif
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1198596..1198610)
location: region:1198596-1198610:-1
so has part: feature:1198596-1198610:-1:exon

position:1198596:-1
position: 1198596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1198610:-1
position: 1198610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1198596-1198610:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: propagated from UniProtKB/Swiss-Prot (Q9HC73.1); transmembrane region
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1196791..1196853)
location: region:1196791-1196853:-1
so has part: feature:1196791-1196853:-1:exon

position:1196791:-1
position: 1196791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1196853:-1
position: 1196853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1196791-1196853:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: propagated from UniProtKB/Swiss-Prot (Q9HC73.1); Region: Box 1 motif
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1193263..1193289)
location: region:1193263-1193289:-1
so has part: feature:1193263-1193289:-1:exon

position:1193263:-1
position: 1193263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1193289:-1
position: 1193289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1193263-1193289:-1:exon

CRLF2
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: propagated from UniProtKB/Swiss-Prot (Q9HC73.1); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(1190972..1191049)
location: region:1190972-1191049:-1
so has part: feature:1190972-1191049:-1:exon

position:1190972:-1
position: 1190972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1191049:-1
position: 1191049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1190972-1191049:-1:exon

CRLF2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CRL2
alternative label: CRLF2Y
alternative label: TSLPR
gene: CRLF2
gene synonym: CRL2; CRLF2Y; TSLPR
note: isoform 2 is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: cytokine receptor-like factor 2 isoform 2
translation: MVYYLKPSSPKHVRFSWHQDAVTVTCSDLSYGDLLYEVQYRSPFDTEWQSKQENTCNVTIEGLDAEKCYSFWVRVKAMEDVYGPDTYPSDWSEVTCWQRGEIRDACAETPTPPKPKLSKFILISSLAILLMVSLLLLSLWKLWRVKKFLIPSVPDPKSIFPGLFEIHQGNFQEWITDTQNVAHLHKMAGAEQESGPEEPLVVQLAKTEAESPRMLDPQTEEKEASGGSLQLPHQPLQGGDVVTIGGFTFVMNDRSYVAL
SIO_010081: CRLF2
subclass of: SO_0000673
so part of: CRLF2
location: complement(join(1190897..1191160,1193218..1193302,1196780..1196900,1198562..1198724,1202402..1202535,1206433..1206445))
location: region:1190897-1206445:-1
so has part: feature:1206433-1206445:-1:exon
so has part: feature:1202402-1202535:-1:exon
so has part: feature:1198562-1198724:-1:exon
so has part: feature:1196780-1196900:-1:exon
so has part: feature:1193218-1193302:-1:exon
so has part: feature:1190897-1191160:-1:exon

NP_001012288.2
type: Protein
SIO_000068: ncbiprotein

CCDS75944.1
type: CCDS
SIO_000068: ccds

position:1206445:-1
position: 1206445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1206433-1206445:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202402-1202535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1198562-1198724:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1196780-1196900:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1193218-1193302:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1190897-1191160:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: hESC enhancers GRCh37_chrX:1324089-1324592, GRCh37_chrY:1274255-1275102 and GRCh37_chrY:1273405-1274254
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1204512..1206209
location: region:1204512-1206209:1
so has part: feature:1204512-1206209:1:region

127138825
type: Gene
SIO_000068: ncbigene

position:1204512:1
position: 1204512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1206209:1
position: 1206209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204512-1206209:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG-H3K4me1 hESC enhancer chrY:1273405-1274254 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 1204512..1205361
location: region:1204512-1205361:1
so has part: feature:1204512-1205361:1:region

position:1205361:1
position: 1205361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1204512-1205361:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG hESC enhancer chrX:1324089-1324592 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 1205196..1205699
location: region:1205196-1205699:1
so has part: feature:1205196-1205699:1:region

position:1205196:1
position: 1205196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1205699:1
position: 1205699
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205196-1205699:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: OCT4-NANOG-H3K4me1 hESC enhancer chrY:1274255-1275102 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 1205362..1206209
location: region:1205362-1206209:1
so has part: feature:1205362-1206209:1:region

position:1205362:1
position: 1205362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1205362-1206209:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: H3K27ac-H3K4me1 hESC enhancers GRCh37_chrX:1367406-1367922 and GRCh37_chrY:1317424-1317933
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1248513..1249040
location: region:1248513-1249040:1
so has part: feature:1248513-1249040:1:region

127138826
type: Gene
SIO_000068: ncbigene

position:1248513:1
position: 1248513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1249040:1
position: 1249040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248513-1249040:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrX:1367406-1367922 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 1248513..1249029
location: region:1248513-1249029:1
so has part: feature:1248513-1249029:1:region

position:1249029:1
position: 1249029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248513-1249029:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: H3K27ac-H3K4me1 hESC enhancer chrY:1317424-1317933 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 1248531..1249040
location: region:1248531-1249040:1
so has part: feature:1248531-1249040:1:region

position:1248531:1
position: 1248531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1248531-1249040:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: NANOG hESC enhancer GRCh37_chrY:1330085-1330594
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1261192..1261701
location: region:1261192-1261701:1
so has part: feature:1261192-1261701:1:region

127138829
type: Gene
SIO_000068: ncbigene

position:1261192:1
position: 1261192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261701:1
position: 1261701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261192-1261701:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG hESC enhancer chrY:1330085-1330594 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive)}
so part of: sequence
location: 1261192..1261701
location: region:1261192-1261701:1
so has part: feature:1261192-1261701:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:1261192-1261701:1:region

CSF2RA
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: colony stimulating factor 2 receptor subunit alpha; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 1268814..1325218
location: region:1268814-1325218:1
so has part: feature:1268814-1325218:1:exon
subclass of: SO_0000010

1438
type: Gene
SIO_000068: ncbigene

HGNC:2435
type: HGNC
SIO_000068: hgnc

425000
type: OMIM
SIO_000068: omim

position:1268814:1
position: 1268814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325218:1
position: 1325218
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1325218:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 21
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379163.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1325028..1325218)
location: region:1268814-1325218:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1325028-1325218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

position:1268879:1
position: 1268879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

position:1274755:1
position: 1274755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1274842:1
position: 1274842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

position:1282678:1
position: 1282678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282779:1
position: 1282779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

position:1285778:1
position: 1285778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285920:1
position: 1285920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

position:1288519:1
position: 1288519
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288642:1
position: 1288642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

position:1288759:1
position: 1288759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288888:1
position: 1288888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

position:1290337:1
position: 1290337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290509:1
position: 1290509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

position:1294328:1
position: 1294328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294461:1
position: 1294461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

position:1295427:1
position: 1295427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1295456:1
position: 1295456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

position:1300491:1
position: 1300491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300626:1
position: 1300626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

position:1303923:1
position: 1303923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304019:1
position: 1304019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

position:1305446:1
position: 1305446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305527:1
position: 1305527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1325028-1325218:1:exon

position:1325028:1
position: 1325028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 17
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379159.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1312269..1312375,1325028..1325218)
location: region:1268814-1325218:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1312269-1312375:1:exon
so has part: feature:1325028-1325218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

position:1274818:1
position: 1274818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1312269-1312375:1:exon

position:1312269:1
position: 1312269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1312375:1
position: 1312375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1325028-1325218:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 19 long SRA reads, 3 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_047442716.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1325028..1325218)
location: region:1268814-1325218:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1325028-1325218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1325028-1325218:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 20
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379162.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1325028..1325218)
location: region:1268814-1325218:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1325028-1325218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1325028-1325218:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 9 long SRA reads, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XM_011545628.3
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305527,1325028..1325218)
location: region:1268814-1325218:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1325028-1325218:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1325028-1325218:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 22
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379164.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1323128)
location: region:1268814-1323128:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1323128:1:exon

position:1323128:1
position: 1323128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322465-1323128:1:exon

position:1322465:1
position: 1322465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 28 long SRA reads, 3 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 36 samples with support for all annotated introns
transcript id: XM_047442715.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1323128)
location: region:1268814-1323128:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1323128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322469-1323128:1:exon

position:1322469:1
position: 1322469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 23
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379165.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1323128)
location: region:1268814-1323128:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1323128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322465-1323128:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 19
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379161.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1323128)
location: region:1268814-1323128:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1323128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322469-1323128:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 14 long SRA reads, 3 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_011545620.3
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1323128)
location: region:1268814-1323128:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1323128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322469-1323128:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 9 long SRA reads, 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments, including 10 samples with support for all annotated introns
transcript id: XM_011545627.4
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305527,1322465..1323128)
location: region:1268814-1323128:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1323128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1323128:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 9 long SRA reads, 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_047442718.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305527,1322469..1323128)
location: region:1268814-1323128:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1323128:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322469-1323128:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 22 ESTs, 25 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_047442711.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322846)
location: region:1268814-1322846:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322846:1:exon

position:1322846:1
position: 1322846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322465-1322487:1:exon

position:1322487:1
position: 1322487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1322576-1322846:1:exon

position:1322576:1
position: 1322576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 20 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_047442712.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322846)
location: region:1268814-1322846:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1322576-1322846:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 13 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_047442710.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322846)
location: region:1268814-1322846:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322846:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322576-1322846:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 13 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XM_047442714.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1322487,1322576..1322669)
location: region:1268814-1322669:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1322487:1:exon
so has part: feature:1322576-1322669:1:exon

position:1322669:1
position: 1322669
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322469-1322487:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322576-1322669:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 25
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379167.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1272840..1272961,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1272840-1272961:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

position:1309935:1
position: 1309935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1272840-1272961:1:exon

position:1272840:1
position: 1272840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1272961:1
position: 1272961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1309402-1309935:1:exon

position:1309402:1
position: 1309402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 13
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379154.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303261..1303362,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303261-1303362:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303261-1303362:1:exon

position:1303261:1
position: 1303261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1303362:1
position: 1303362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_006140.6
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 27
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379169.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172246.4
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 11
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_027760.3
SIO_010081: CSF2RA
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 6
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172249.4
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 7
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161529.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282409..1282560,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282409-1282560:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282409-1282560:1:exon

position:1282409:1
position: 1282409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1282560:1
position: 1282560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 8
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161530.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303261..1303362,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303261-1303362:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303261-1303362:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172245.4
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 4
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_172247.3
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 18
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379160.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 24
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379166.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294347..1294461,1295427..1295456,1299003..1299065,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294347-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1299003-1299065:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294347-1294461:1:exon

position:1294347:1
position: 1294347
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1299003-1299065:1:exon

position:1299003:1
position: 1299003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1299065:1
position: 1299065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 16
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379158.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274765..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274765-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274765-1274818:1:exon

position:1274765:1
position: 1274765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 12
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379153.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303261..1303362,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303261-1303362:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303261-1303362:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 15
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379156.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 26
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379168.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 10
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161532.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1282678..1282779,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309935)
location: region:1268814-1309935:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309935:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 9
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001161531.2
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274842,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1305628..1305941)
location: region:1268814-1305941:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274842:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1305628-1305941:1:exon

position:1305941:1
position: 1305941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274842:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305628-1305941:1:exon

position:1305628:1
position: 1305628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant 14
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001379155.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1268814..1268879,1274755..1274818,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1305628..1305941)
location: region:1268814-1305941:1
so has part: feature:1268814-1268879:1:exon
so has part: feature:1274755-1274818:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1305628-1305941:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1268814-1268879:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1274755-1274818:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1305628-1305941:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 13 long SRA reads, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_047442713.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282236..1282560,1282678..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322846)
location: region:1282236-1322846:1
so has part: feature:1282236-1282560:1:exon
so has part: feature:1282678-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322846:1:exon

position:1282236:1
position: 1282236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282236-1282560:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1282678-1282779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1322576-1322846:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform l precursor is encoded by transcript variant 21; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform l precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVFQRGVPGAPS
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1325028..1325063)
location: region:1282704-1325063:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1325028-1325063:1:exon

NP_001366092.1
type: Protein
SIO_000068: ncbiprotein

position:1282704:1
position: 1282704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1325063:1
position: 1325063
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1325028-1325063:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

position:1282760:1
position: 1282760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

position:1285837:1
position: 1285837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285839:1
position: 1285839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

position:1285861:1
position: 1285861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1285863:1
position: 1285863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

position:1288594:1
position: 1288594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288596:1
position: 1288596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

position:1288782:1
position: 1288782
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288784:1
position: 1288784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

position:1288818:1
position: 1288818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288820:1
position: 1288820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

position:1290407:1
position: 1290407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290409:1
position: 1290409
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

position:1290446:1
position: 1290446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1290448:1
position: 1290448
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

position:1294348:1
position: 1294348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294350:1
position: 1294350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

position:1294366:1
position: 1294366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1294368:1
position: 1294368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

position:1300494:1
position: 1300494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300496:1
position: 1300496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

position:1300593:1
position: 1300593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300595:1
position: 1300595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

position:1300596:1
position: 1300596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1300610:1
position: 1300610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

position:1303937:1
position: 1303937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1304014:1
position: 1304014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

position:1305465:1
position: 1305465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305491:1
position: 1305491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform l precursor is encoded by transcript variant 20; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform l precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVFQRGVPGAPS
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1325028..1325063)
location: region:1282704-1325063:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1325028-1325063:1:exon

NP_001366091.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1325028-1325063:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X6
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVFQRGVPGAPS
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1325028..1325063)
location: region:1282704-1325063:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1325028-1325063:1:exon

XP_047298672.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1325028-1325063:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X1
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVALQRKTLCGAPLNPLWSRGSSRRSHGSPERPWLSYSTITQWTERRPSSKAAH
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322714)
location: region:1282704-1322714:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322714:1:exon

XP_047298666.1
type: Protein
SIO_000068: ncbiprotein

position:1322714:1
position: 1322714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322576-1322714:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X1
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVALQRKTLCGAPLNPLWSRGSSRRSHGSPERPWLSYSTITQWTERRPSSKAAH
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322714)
location: region:1282704-1322714:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322714:1:exon

XP_047298667.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322576-1322714:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X1
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVALQRKTLCGAPLNPLWSRGSSRRSHGSPERPWLSYSTITQWTERRPSSKAAH
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322714)
location: region:1282704-1322714:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322714:1:exon

XP_047298668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322576-1322714:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X1
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVALQRKTLCGAPLNPLWSRGSSRRSHGSPERPWLSYSTITQWTERRPSSKAAH
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322714)
location: region:1282704-1322714:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322714:1:exon

XP_047298669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322576-1322714:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X3
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDELSRERPSVGPH
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1322487,1322576..1322592)
location: region:1282704-1322592:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1322487:1:exon
so has part: feature:1322576-1322592:1:exon

XP_047298670.1
type: Protein
SIO_000068: ncbiprotein

position:1322592:1
position: 1322592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322469-1322487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322576-1322592:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform k precursor is encoded by transcript variant 19; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform k precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDELSRERPCKYLFLSQ
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1322513)
location: region:1282704-1322513:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1322513:1:exon

NP_001366090.1
type: Protein
SIO_000068: ncbiprotein

position:1322513:1
position: 1322513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322469-1322513:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X2
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDELSRERPCKYLFLSQ
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1322513)
location: region:1282704-1322513:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1322513:1:exon

XP_047298671.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322469-1322513:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X2
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDELSRERPCKYLFLSQ
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322469..1322513)
location: region:1282704-1322513:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322469-1322513:1:exon

XP_011543922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322469-1322513:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform m precursor is encoded by transcript variant 22; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform m precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVALQRKTL
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322491)
location: region:1282704-1322491:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322491:1:exon

NP_001366093.1
type: Protein
SIO_000068: ncbiprotein

position:1322491:1
position: 1322491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1322491:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform m precursor is encoded by transcript variant 23; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform m precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVALQRKTL
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322491)
location: region:1282704-1322491:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322491:1:exon

NP_001366094.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1322491:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform i precursor is encoded by transcript variant 17; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform i precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEAHGDTPESSLHGNIPGIKVLLP
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1312269..1312337)
location: region:1282704-1312337:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1312269-1312337:1:exon

NP_001366088.1
type: Protein
SIO_000068: ncbiprotein

position:1312337:1
position: 1312337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1312269-1312337:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform b precursor is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform b precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFDHLGGIHPRGRERLPRRGLDREGNYLRPRGCRNGMDISASATRGNCFLDDAVNLYIIFYVFI
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1309402..1309589)
location: region:1282704-1309589:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1309402-1309589:1:exon

NP_758449.1
type: Protein
SIO_000068: ncbiprotein

CCDS35190.1
type: CCDS
SIO_000068: ccds

position:1309589:1
position: 1309589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309402-1309589:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

position:1282769:1
position: 1282769
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform b
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1309402..1309586)
location: region:1282761-1309586:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1309402-1309586:1:exon

position:1282761:1
position: 1282761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1309586:1
position: 1309586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1309402-1309586:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform f precursor is encoded by transcript variant 13; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform f precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSHSVTQAGVQWHNLGSLQPPSPRLKRFSCLRLPGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303261..1303362,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303261-1303362:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001366083.1
type: Protein
SIO_000068: ncbiprotein

CCDS55359.1
type: CCDS
SIO_000068: ccds

position:1309479:1
position: 1309479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303261-1303362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform f precursor is encoded by transcript variant 12; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform f precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSHSVTQAGVQWHNLGSLQPPSPRLKRFSCLRLPGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303261..1303362,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303261-1303362:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001366082.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303261-1303362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform f precursor is encoded by transcript variant 8; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform f precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSHSVTQAGVQWHNLGSLQPPSPRLKRFSCLRLPGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303261..1303362,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303261-1303362:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001155002.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303261-1303362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform f
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303261..1303362,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282761-1309476:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303261-1303362:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

position:1309476:1
position: 1309476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303261-1303362:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform a precursor is encoded by transcript variant 16; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001366087.1
type: Protein
SIO_000068: ncbiprotein

CCDS35191.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: Granulocyte-macrophage colony-stimulating factor receptor subunit alpha. /id=PRO_0000010872
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282770..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282770-1309476:1
so has part: feature:1282770-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

position:1282770:1
position: 1282770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282770-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform a precursor is encoded by transcript variant 15; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001366085.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform a precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_006131.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282761-1309476:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: Granulocyte-macrophage colony-stimulating factor receptor subunit alpha. /id=PRO_0000010872
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282770..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282770-1309476:1
so has part: feature:1282770-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282770-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform a precursor is encoded by transcript variant 7; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001155001.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282761-1309476:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: Granulocyte-macrophage colony-stimulating factor receptor subunit alpha. /id=PRO_0000010872
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282770..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282770-1309476:1
so has part: feature:1282770-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282770-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform a precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_758448.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform a
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282761-1309476:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: Granulocyte-macrophage colony-stimulating factor receptor subunit alpha. /id=PRO_0000010872
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282770..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309476)
location: region:1282770-1309476:1
so has part: feature:1282770-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309476:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282770-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1309402-1309476:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform j precursor is encoded by transcript variant 18; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform j precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001366089.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform n precursor is encoded by transcript variant 24; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform n precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIAMSPYVATRRTASYGGNSPGPIRSCRTWTFSTSWTSTERIPSLARKTYCASVAQGWTRWILNQRMQISHGFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294347..1294461,1295427..1295456,1299003..1299065,1305446..1305527,1309402..1309479)
location: region:1282704-1309479:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294347-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1299003-1299065:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001366095.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294347-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1299003-1299065:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1309402-1309479:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform g precursor is encoded by transcript variant 14; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform g precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEMGPQRHHRCGWNLYPTPGPSPGSGSSPRLGSESSL
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1305628..1305735)
location: region:1282704-1305735:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1305628-1305735:1:exon

NP_001366084.1
type: Protein
SIO_000068: ncbiprotein

CCDS55360.1
type: CCDS
SIO_000068: ccds

position:1305735:1
position: 1305735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305628-1305735:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform g precursor is encoded by transcript variant 9; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform g precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEMGPQRHHRCGWNLYPTPGPSPGSGSSPRLGSESSL
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1305628..1305735)
location: region:1282704-1305735:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1305628-1305735:1:exon

NP_001155003.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305628-1305735:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform g
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1305628..1305732)
location: region:1282761-1305732:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1305628-1305732:1:exon

position:1305732:1
position: 1305732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1305628-1305732:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); transmembrane region
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1303937..1304014
location: region:1303937-1304014:1
so has part: feature:1303937-1304014:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1303937-1304014:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: Box 1 motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1305465..1305491
location: region:1305465-1305491:1
so has part: feature:1305465-1305491:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1305465-1305491:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform c precursor is encoded by transcript variant 27; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform c precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305501:1:exon

NP_001366098.1
type: Protein
SIO_000068: ncbiprotein

CCDS35192.1
type: CCDS
SIO_000068: ccds

position:1305501:1
position: 1305501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform c precursor is encoded by transcript variant 25; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform c precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305501:1:exon

NP_001366096.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform c precursor is encoded by transcript variant 26; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform c precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305501:1:exon

NP_001366097.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282760
location: region:1282704-1282760:1
so has part: feature:1282704-1282760:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282760:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X5
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305501:1:exon

XP_047298674.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform c precursor is encoded by transcript variant 4; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform c precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305501:1:exon

NP_758450.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform c
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305498)
location: region:1282761-1305498:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305498:1:exon

position:1305498:1
position: 1305498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305498:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294348..1294350
location: region:1294348-1294350:1
so has part: feature:1294348-1294350:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294348-1294350:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:18692472; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1294366..1294368
location: region:1294366-1294368:1
so has part: feature:1294366-1294368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1294366-1294368:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300494..1300496
location: region:1300494-1300496:1
so has part: feature:1300494-1300496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300494-1300496:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300593..1300595
location: region:1300593-1300595:1
so has part: feature:1300593-1300595:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300593-1300595:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1); Region: WSXWS motif
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1300596..1300610
location: region:1300596-1300610:1
so has part: feature:1300596-1300610:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1300596-1300610:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X5
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305501:1:exon

XP_011543929.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X5
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1305446-1305501:1:exon

XP_011543930.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform e precursor is encoded by transcript variant 6; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform e precursor
translation: MLLLVTSLLLCELPHPAFLLIPEKSDLRTVAPASSLNVRFDSRTMNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIGSLGYSGCSRQFHRSKTN
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282704..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1305446..1305501)
location: region:1282704-1305501:1
so has part: feature:1282704-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1305446-1305501:1:exon

NP_758452.1
type: Protein
SIO_000068: ncbiprotein

CCDS35193.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1305446-1305501:1:exon

CSF2RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: propagated from UniProtKB/Swiss-Prot (P15509.1)
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1282704..1282769
location: region:1282704-1282769:1
so has part: feature:1282704-1282769:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282704-1282769:1:exon

CSF2RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform e
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282761..1282779,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1305446..1305498)
location: region:1282761-1305498:1
so has part: feature:1282761-1282779:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1305446-1305498:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1282761-1282779:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1305446-1305498:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285837..1285839
location: region:1285837-1285839:1
so has part: feature:1285837-1285839:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285837-1285839:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1285861..1285863
location: region:1285861-1285863:1
so has part: feature:1285861-1285863:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1285861-1285863:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288594..1288596
location: region:1288594-1288596:1
so has part: feature:1288594-1288596:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288594-1288596:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288782..1288784
location: region:1288782-1288784:1
so has part: feature:1288782-1288784:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288782-1288784:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1288818..1288820
location: region:1288818-1288820:1
so has part: feature:1288818-1288820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1288818-1288820:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290407..1290409
location: region:1290407-1290409:1
so has part: feature:1290407-1290409:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290407-1290409:1:exon

CSF2RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P15509.1); glycosylation site
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: 1290446..1290448
location: region:1290446-1290448:1
so has part: feature:1290446-1290448:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1290446-1290448:1:exon

CSF2RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
product: colony stimulating factor 2 receptor subunit alpha, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_047442717.1
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1282803..1283042,1285778..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322850)
location: region:1282803-1322850:1
so has part: feature:1282803-1283042:1:exon
so has part: feature:1285778-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322850:1:exon

position:1282803:1
position: 1282803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322850:1
position: 1322850
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1282803-1283042:1:exon

position:1283042:1
position: 1283042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1285778-1285920:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322576-1322850:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform X4
translation: MNLSWDCQENTTFSKCFLTDKKNRVVEPRLSNNECSCTFREICLHEGVTFEVHVNTSQRGFQQKLLYPNSGREGTAAQNFSCFIYNADLMNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEVALQRKTLCGAPLNPLWSRGSSRRSHGSPERPWLSYSTITQWTERRPSSKAAH
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1285834..1285920,1288519..1288642,1288759..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1322465..1322487,1322576..1322714)
location: region:1285834-1322714:1
so has part: feature:1285834-1285920:1:exon
so has part: feature:1288519-1288642:1:exon
so has part: feature:1288759-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1322465-1322487:1:exon
so has part: feature:1322576-1322714:1:exon

XP_047298673.1
type: Protein
SIO_000068: ncbiprotein

position:1285834:1
position: 1285834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1285834-1285920:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1288519-1288642:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1288759-1288888:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1322465-1322487:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322576-1322714:1:exon

CSF2RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: alphaGMR
alternative label: CD116
alternative label: CDw116
alternative label: CSF2R
alternative label: CSF2RAX
alternative label: CSF2RAY
alternative label: CSF2RX
alternative label: CSF2RY
alternative label: GM-CSF-R-alpha
alternative label: GMCSFR
alternative label: GMCSFR-alpha
alternative label: GMR
alternative label: GMR-alpha
alternative label: SMDP4
gene: CSF2RA
gene synonym: alphaGMR; CD116; CDw116; CSF2R; CSF2RAX; CSF2RAY; CSF2RX; CSF2RY; GM-CSF-R-alpha; GMCSFR; GMCSFR-alpha; GMR; GMR-alpha; SMDP4
note: isoform h is encoded by transcript variant 10; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: granulocyte-macrophage colony-stimulating factor receptor subunit alpha isoform h
translation: MNCTWARGPTAPRDVQYFLYIRNSKRRREIRCPYYIQDSGTHVGCHLDNLSGLTSRNYFLVNGTSREIGIQFFDSLLDTKKIERFNPPSNVTVRCNTTHCLVRWKQPRTYQKLSYLDFQYQLDVHRKNTQPGTENLLINVSGDLENRYNFPSSEPRAKHSVKIRAADVRILNWSSWSEAIEFGSDDGNLGSVYIYVLLIVGTLVCGIVLGFLFKRFLRIQRLFPPVPQIKDKLNDNHEVEDEIIWEEFTPEEGKGYREEVLTVKEIT
SIO_010081: CSF2RA
subclass of: SO_0000673
so part of: CSF2RA
location: join(1288815..1288888,1290337..1290509,1294328..1294461,1295427..1295456,1300491..1300626,1303923..1304019,1305446..1305527,1309402..1309479)
location: region:1288815-1309479:1
so has part: feature:1288815-1288888:1:exon
so has part: feature:1290337-1290509:1:exon
so has part: feature:1294328-1294461:1:exon
so has part: feature:1295427-1295456:1:exon
so has part: feature:1300491-1300626:1:exon
so has part: feature:1303923-1304019:1:exon
so has part: feature:1305446-1305527:1:exon
so has part: feature:1309402-1309479:1:exon

NP_001155004.1
type: Protein
SIO_000068: ncbiprotein

position:1288815:1
position: 1288815
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1288815-1288888:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1290337-1290509:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1294328-1294461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1295427-1295456:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1300491-1300626:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1303923-1304019:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1305446-1305527:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1309402-1309479:1:exon

LOC124905238
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC124905238
note: uncharacterized LOC124905238; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1293546..1293998)
location: region:1293546-1293998:-1
so has part: feature:1293546-1293998:-1:exon
subclass of: SO_0000011

124905238
type: Gene
SIO_000068: ncbigene

position:1293546:-1
position: 1293546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293998:-1
position: 1293998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293546-1293998:-1:exon

LOC124905238
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC124905238
product: uncharacterized LOC124905238
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_007068468.1
SIO_010081: LOC124905238
subclass of: SO_0000673
so part of: LOC124905238
location: complement(join(1293546..1293582,1293843..1293885,1293929..1293998))
location: region:1293546-1293998:-1
so has part: feature:1293929-1293998:-1:exon
so has part: feature:1293843-1293885:-1:exon
so has part: feature:1293546-1293582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293929-1293998:-1:exon

position:1293929:-1
position: 1293929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1293843-1293885:-1:exon

position:1293843:-1
position: 1293843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1293885:-1
position: 1293885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1293546-1293582:-1:exon

position:1293582:-1
position: 1293582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MIR3690
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: hsa-mir-3690-1
alternative label: hsa-mir-3690-2
alternative label: mir-3690-1
alternative label: mir-3690-2
alternative label: MIR3690-1
alternative label: MIR3690-2
gene: MIR3690
gene synonym: hsa-mir-3690-1; hsa-mir-3690-2; mir-3690-1; mir-3690-2; MIR3690-1; MIR3690-2
note: microRNA 3690; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1293918..1293992
location: region:1293918-1293992:1
so has part: feature:1293918-1293992:1:exon
subclass of: SO_0000571

100500894
type: Gene
SIO_000068: ncbigene

HGNC:38967
type: HGNC
SIO_000068: hgnc

MI0016091
type: miRBase
SIO_000068: mirbase

position:1293918:1
position: 1293918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293992:1
position: 1293992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293918-1293992:1:exon

MIR3690
type: Precursor RNA
subclass of: SO_0000185
RO_0002162: 9606
alternative label: hsa-mir-3690-1
alternative label: hsa-mir-3690-2
alternative label: mir-3690-1
alternative label: mir-3690-2
alternative label: MIR3690-1
alternative label: MIR3690-2
gene: MIR3690
gene synonym: hsa-mir-3690-1; hsa-mir-3690-2; mir-3690-1; mir-3690-2; MIR3690-1; MIR3690-2
product: microRNA 3690
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_037461.1
SIO_010081: MIR3690
subclass of: SO_0000673
so part of: MIR3690
location: 1293918..1293992
location: region:1293918-1293992:1
so has part: feature:1293918-1293992:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1293918-1293992:1:exon

MIR3690
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: hsa-mir-3690-1
alternative label: hsa-mir-3690-2
alternative label: mir-3690-1
alternative label: mir-3690-2
alternative label: MIR3690-1
alternative label: MIR3690-2
nc RNA class: miRNA
gene: MIR3690
gene synonym: hsa-mir-3690-1; hsa-mir-3690-2; mir-3690-1; mir-3690-2; MIR3690-1; MIR3690-2
product: hsa-miR-3690
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
SIO_010081: MIR3690
subclass of: SO_0000673
so part of: MIR3690
location: 1293927..1293949
location: region:1293927-1293949:1
so has part: feature:1293927-1293949:1:exon

MIMAT0018119
type: miRBase
SIO_000068: mirbase

position:1293927:1
position: 1293927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1293949:1
position: 1293949
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1293927-1293949:1:exon

RNA5SP498
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: RN5S498
gene: RNA5SP498
gene synonym: RN5S498
note: RNA, 5S ribosomal pseudogene 498; Derived by automated computational analysis using gene prediction method: Curated Genomic.
pseudo: true
so part of: sequence
location: complement(1300256..1300375)
location: region:1300256-1300375:-1
so has part: feature:1300256-1300375:-1:exon

106480770
type: Gene
SIO_000068: ncbigene

HGNC:43398
type: HGNC
SIO_000068: hgnc

position:1300256:-1
position: 1300256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1300375:-1
position: 1300375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1300256-1300375:-1:exon

IL3RA
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: interleukin 3 receptor subunit alpha; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: 1336785..1382689
location: region:1336785-1382689:1
so has part: feature:1336785-1382689:1:exon
subclass of: SO_0000010

3563
type: Gene
SIO_000068: ncbigene

HGNC:6012
type: HGNC
SIO_000068: hgnc

430000
type: OMIM
SIO_000068: omim

position:1336785:1
position: 1336785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382689:1
position: 1382689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336785-1382689:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor subunit alpha, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_002183.4
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1336785..1336926,1341728..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382689)
location: region:1336785-1382689:1
so has part: feature:1336785-1336926:1:exon
so has part: feature:1341728-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336785-1336926:1:exon

position:1336926:1
position: 1336926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1341728-1341829:1:exon

position:1341728:1
position: 1341728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1341829:1
position: 1341829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1345316-1345434:1:exon

position:1345316:1
position: 1345316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345434:1
position: 1345434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1348431-1348545:1:exon

position:1348431:1
position: 1348431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348545:1
position: 1348545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1352100-1352232:1:exon

position:1352100:1
position: 1352100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352232:1
position: 1352232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1352322-1352506:1:exon

position:1352322:1
position: 1352322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352506:1
position: 1352506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1356221-1356336:1:exon

position:1356221:1
position: 1356221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356336:1
position: 1356336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1358861-1358887:1:exon

position:1358861:1
position: 1358861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1358887:1
position: 1358887
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1365138-1365252:1:exon

position:1365138:1
position: 1365138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365252:1
position: 1365252
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1378659-1378764:1:exon

position:1378659:1
position: 1378659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378764:1
position: 1378764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1381023-1381104:1:exon

position:1381023:1
position: 1381023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381104:1
position: 1381104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1382391-1382689:1:exon

position:1382391:1
position: 1382391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor subunit alpha, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 36 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_005274781.2
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1336785..1336926,1341728..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352325..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382689)
location: region:1336785-1382689:1
so has part: feature:1336785-1336926:1:exon
so has part: feature:1341728-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352325-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336785-1336926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1341728-1341829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352325-1352506:1:exon

position:1352325:1
position: 1352325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1382391-1382689:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor subunit alpha, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001267713.2
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1336785..1336926,1341728..1341829,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382689)
location: region:1336785-1382689:1
so has part: feature:1336785-1336926:1:exon
so has part: feature:1341728-1341829:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336785-1336926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1341728-1341829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1382391-1382689:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor subunit alpha, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 30 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_005274780.6
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1336785..1336926,1341731..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382689)
location: region:1336785-1382689:1
so has part: feature:1336785-1336926:1:exon
so has part: feature:1341731-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336785-1336926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1341731-1341829:1:exon

position:1341731:1
position: 1341731
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1382391-1382689:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor subunit alpha, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 ESTs, 25 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 111 samples with support for all annotated introns
transcript id: XM_017030043.3
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1336785..1336926,1341731..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352325..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382689)
location: region:1336785-1382689:1
so has part: feature:1336785-1336926:1:exon
so has part: feature:1341731-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352325-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1336785-1336926:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1341731-1341829:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352325-1352506:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1382391-1382689:1:exon

LOC101928032
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC101928032
note: uncharacterized LOC101928032; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1336972..1378476)
location: region:1336972-1378476:-1
so has part: feature:1336972-1378476:-1:exon
subclass of: SO_0000011

101928032
type: Gene
SIO_000068: ncbigene

position:1336972:-1
position: 1336972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1378476:-1
position: 1378476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1336972-1378476:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007068475.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1336972..1337516,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1336972-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1336972-1337516:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

position:1378322:-1
position: 1378322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

position:1367956:-1
position: 1367956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1368090:-1
position: 1368090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

position:1365103:-1
position: 1365103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1365171:-1
position: 1365171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1355572-1356140:-1:exon

position:1355572:-1
position: 1355572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356140:-1
position: 1356140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1352620-1352718:-1:exon

position:1352620:-1
position: 1352620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352718:-1
position: 1352718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1352310-1352471:-1:exon

position:1352310:-1
position: 1352310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352471:-1
position: 1352471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1341598-1341813:-1:exon

position:1341598:-1
position: 1341598
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1341813:-1
position: 1341813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1336972-1337516:-1:exon

position:1337516:-1
position: 1337516
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756028.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

position:1337574:-1
position: 1337574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1337574-1338789:-1:exon

position:1338789:-1
position: 1338789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007068474.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1367956..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756017.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007068470.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1361605..1361749,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1361605-1361749:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361605-1361749:-1:exon

position:1361605:-1
position: 1361605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1361749:-1
position: 1361749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007068471.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1361371..1361749,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1361371-1361749:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361371-1361749:-1:exon

position:1361371:-1
position: 1361371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X16
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007068472.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352552..1352718,1355572..1356140,1361371..1361749,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1361371-1361749:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352552-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361371-1361749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352552-1352718:-1:exon

position:1352552:-1
position: 1352552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X11
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756026.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1367952..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367952-1368090:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367952-1368090:-1:exon

position:1367952:-1
position: 1367952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756022.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1365103..1365171,1367952..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367952-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367952-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X12
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756027.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1367939..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367939-1368090:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367939-1368090:-1:exon

position:1367939:-1
position: 1367939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756018.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1365103..1365171,1367939..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367939-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367939-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_007068473.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1361371..1361749,1365103..1365171,1367939..1368090,1378322..1378476))
location: region:1337574-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367939-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1361371-1361749:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367939-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361371-1361749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756029.3
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1358760..1359475))
location: region:1337574-1359475:-1
so has part: feature:1358760-1359475:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

position:1359475:-1
position: 1359475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1358760-1359475:-1:exon

position:1358760:-1
position: 1358760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1337574-1338789:-1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756030.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1337574..1338789,1341598..1341813,1352310..1352471,1352620..1352718,1355572..1356140,1358534..1359475))
location: region:1337574-1359475:-1
so has part: feature:1358534-1359475:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1341598-1341813:-1:exon
so has part: feature:1337574-1338789:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1358534-1359475:-1:exon

position:1358534:-1
position: 1358534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1341598-1341813:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1337574-1338789:-1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor subunit alpha, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 ESTs, 24 long SRA reads, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 109 samples with support for all annotated introns
transcript id: XM_047442730.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341582..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382689)
location: region:1341582-1382689:1
so has part: feature:1341582-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382689:1:exon

position:1341582:1
position: 1341582
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341582-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382689:1:exon

IL3RA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin 3 receptor subunit alpha, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 23 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 112 samples with support for all annotated introns
transcript id: XM_047442731.1
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341582..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352325..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382689)
location: region:1341582-1382689:1
so has part: feature:1341582-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352325-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382689:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1341582-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352325-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382689:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X1
translation: MHTHHRFPSRSSSFCCEHQALEGASILHYPQPSFTASPRCLTLVSPAAGTSVLRSGAAFPMVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341586..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382465)
location: region:1341586-1382465:1
so has part: feature:1341586-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382465:1:exon

XP_047298686.1
type: Protein
SIO_000068: ncbiprotein

position:1341586:1
position: 1341586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382465:1
position: 1382465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341586-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382465:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X2
translation: MHTHHRFPSRSSSFCCEHQALEGASILHYPQPSFTASPRCLTLVSPAAGTSVLRSGAAFPMVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVAKRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341586..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352325..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382465)
location: region:1341586-1382465:1
so has part: feature:1341586-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352325-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382465:1:exon

XP_047298687.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1341586-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352325-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382465:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: isoform 1 precursor is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform 1 precursor
translation: MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341766..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382465)
location: region:1341766-1382465:1
so has part: feature:1341766-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382465:1:exon

NP_002174.1
type: Protein
SIO_000068: ncbiprotein

CCDS14113.1
type: CCDS
SIO_000068: ccds

position:1341766:1
position: 1341766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341766-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382465:1:exon

IL3RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1341766..1341819
location: region:1341766-1341819:1
so has part: feature:1341766-1341819:1:exon

position:1341819:1
position: 1341819
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341766-1341819:1:exon

IL3RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: Interleukin-3 receptor subunit alpha. /id=PRO_0000010883
note: propagated from UniProtKB/Swiss-Prot (P26951.1)
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341820..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382462)
location: region:1341820-1382462:1
so has part: feature:1341820-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382462:1:exon

position:1341820:1
position: 1341820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1382462:1
position: 1382462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341820-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382462:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:25043189, ECO:0007744|PDB:4JZJ; propagated from UniProtKB/Swiss-Prot (P26951.1); glycosylation site
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1345387..1345389
location: region:1345387-1345389:1
so has part: feature:1345387-1345389:1:exon

position:1345387:1
position: 1345387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1345389:1
position: 1345389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1345387-1345389:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P26951.1); glycosylation site
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1348437..1348439
location: region:1348437-1348439:1
so has part: feature:1348437-1348439:1:exon

position:1348437:1
position: 1348437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348439:1
position: 1348439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348437-1348439:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000269|PubMed:25043189, ECO:0007744|PDB:4JZJ; propagated from UniProtKB/Swiss-Prot (P26951.1); glycosylation site
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1348485..1348487
location: region:1348485-1348487:1
so has part: feature:1348485-1348487:1:exon

position:1348485:1
position: 1348485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1348487:1
position: 1348487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1348485-1348487:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P26951.1); glycosylation site
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1352126..1352128
location: region:1352126-1352128:1
so has part: feature:1352126-1352128:1:exon

position:1352126:1
position: 1352126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1352128:1
position: 1352128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352126-1352128:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P26951.1); glycosylation site
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1356238..1356240
location: region:1356238-1356240:1
so has part: feature:1356238-1356240:1:exon

position:1356238:1
position: 1356238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356240:1
position: 1356240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1356238-1356240:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (P26951.1); glycosylation site
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1356256..1356258
location: region:1356256-1356258:1
so has part: feature:1356256-1356258:1:exon

position:1356256:1
position: 1356256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1356258:1
position: 1356258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1356256-1356258:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: propagated from UniProtKB/Swiss-Prot (P26951.1); Region: WSXWS motif
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1365222..1365236
location: region:1365222-1365236:1
so has part: feature:1365222-1365236:1:exon

position:1365222:1
position: 1365222
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1365236:1
position: 1365236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1365222-1365236:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: propagated from UniProtKB/Swiss-Prot (P26951.1); transmembrane region
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1378700..1378759
location: region:1378700-1378759:1
so has part: feature:1378700-1378759:1:exon

position:1378700:1
position: 1378700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1378759:1
position: 1378759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378700-1378759:1:exon

IL3RA
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: propagated from UniProtKB/Swiss-Prot (P26951.1); Region: Box 1 motif
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: 1381042..1381068
location: region:1381042-1381068:1
so has part: feature:1381042-1381068:1:exon

position:1381042:1
position: 1381042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1381068:1
position: 1381068
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1381042-1381068:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X3
translation: MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341766..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382465)
location: region:1341766-1382465:1
so has part: feature:1341766-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382465:1:exon

XP_005274837.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1341766-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382465:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X4
translation: MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVAKRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341766..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352325..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382465)
location: region:1341766-1382465:1
so has part: feature:1341766-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352325-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382465:1:exon

XP_016885532.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1341766-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352325-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382465:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform X4
translation: MVLLWLTLLLIALPCLLQTKEDPNPPITNLRMKAKAQQLTWDLNRNVTDIECVKDADYSMPAVNNSYCQFGAISLCEVTNYTVRVANPPFSTWILFPENSGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVAKRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341766..1341829,1345316..1345434,1348431..1348545,1352100..1352232,1352325..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382465)
location: region:1341766-1382465:1
so has part: feature:1341766-1341829:1:exon
so has part: feature:1345316-1345434:1:exon
so has part: feature:1348431-1348545:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352325-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382465:1:exon

XP_005274838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1341766-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1345316-1345434:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1348431-1348545:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352325-1352506:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1382391-1382465:1:exon

IL3RA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
note: isoform 2 precursor is encoded by transcript variant 2; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: interleukin-3 receptor subunit alpha isoform 2 precursor
translation: MVLLWLTLLLIALPCLLQTKEGGKPWAGAENLTCWIHDVDFLSCSWAVGPGAPADVQYDLYLNVANRRQQYECLHYKTDAQGTRIGCRFDDISRLSSGSQSSHILVRGRSAAFGIPCTDKFVVFSQIEILTPPNMTAKCNKTHSFMHWKMRSHFNRKFRYELQIQKRMQPVITEQVRDRTSFQLLNPGTYTVQIRARERVYEFLSAWSTPQRFECDQEEGANTRAWRTSLLIALGTLLALVCVFVICRRYLVMQRLFPRIPHMKDPIGDSFQNDKLVVWEAGKAGLEECLVTEVQVVQKT
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341766..1341829,1352100..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382465)
location: region:1341766-1382465:1
so has part: feature:1341766-1341829:1:exon
so has part: feature:1352100-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382465:1:exon

NP_001254642.1
type: Protein
SIO_000068: ncbiprotein

CCDS59158.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1341766-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352100-1352232:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1382391-1382465:1:exon

IL3RA
type: Signal Peptide
subclass of: SO_0000418
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
inference: COORDINATES: ab initio prediction:SignalP:4.0
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1341766..1341829,1352100..1352101)
location: region:1341766-1352101:1
so has part: feature:1341766-1341829:1:exon
so has part: feature:1352100-1352101:1:exon

position:1352101:1
position: 1352101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1341766-1341829:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352100-1352101:1:exon

IL3RA
type: Mature Peptide
subclass of: SO_0000419
RO_0002162: 9606
alternative label: CD123
alternative label: hIL-3Ra
alternative label: IL3R
alternative label: IL3RAY
alternative label: IL3RX
alternative label: IL3RY
gene: IL3RA
gene synonym: CD123; hIL-3Ra; IL3R; IL3RAY; IL3RX; IL3RY
product: interleukin-3 receptor subunit alpha isoform 2
SIO_010081: IL3RA
subclass of: SO_0000673
so part of: IL3RA
location: join(1352102..1352232,1352322..1352506,1356221..1356336,1358861..1358887,1365138..1365252,1378659..1378764,1381023..1381104,1382391..1382462)
location: region:1352102-1382462:1
so has part: feature:1352102-1352232:1:exon
so has part: feature:1352322-1352506:1:exon
so has part: feature:1356221-1356336:1:exon
so has part: feature:1358861-1358887:1:exon
so has part: feature:1365138-1365252:1:exon
so has part: feature:1378659-1378764:1:exon
so has part: feature:1381023-1381104:1:exon
so has part: feature:1382391-1382462:1:exon

position:1352102:1
position: 1352102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1352102-1352232:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1352322-1352506:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1356221-1356336:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1358861-1358887:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1365138-1365252:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1378659-1378764:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1381023-1381104:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1382391-1382462:1:exon

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X14
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001756023.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1350029..1350586,1352310..1352471,1352620..1352718,1355572..1356140,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1350029-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1350029-1350586:-1:exon

position:1350029:-1
position: 1350029
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350029-1350586:-1:exon

position:1350586:-1
position: 1350586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X15
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_001756019.2
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1350774..1350860,1352310..1352471,1352552..1352718,1355572..1356140,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1350774-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352552-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1350774-1350860:-1:exon

position:1350774:-1
position: 1350774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352552-1352718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1350774-1350860:-1:exon

position:1350860:-1
position: 1350860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X18
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_007068476.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1350774..1351199,1352310..1352471,1352620..1352718,1355572..1356140,1361371..1361749,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1350774-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1361371-1361749:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1350774-1351199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1361371-1361749:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1350774-1351199:-1:exon

position:1351199:-1
position: 1351199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC101928032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
nc RNA class: lncRNA
gene: LOC101928032
product: uncharacterized LOC101928032, transcript variant X17
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XR_001756020.1
SIO_010081: LOC101928032
subclass of: SO_0000673
so part of: LOC101928032
location: complement(join(1351160..1351199,1352310..1352471,1352620..1352718,1355572..1356140,1365103..1365171,1367956..1368090,1378322..1378476))
location: region:1351160-1378476:-1
so has part: feature:1378322-1378476:-1:exon
so has part: feature:1367956-1368090:-1:exon
so has part: feature:1365103-1365171:-1:exon
so has part: feature:1355572-1356140:-1:exon
so has part: feature:1352620-1352718:-1:exon
so has part: feature:1352310-1352471:-1:exon
so has part: feature:1351160-1351199:-1:exon

position:1351160:-1
position: 1351160
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1378322-1378476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1367956-1368090:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1365103-1365171:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1355572-1356140:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1352620-1352718:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1352310-1352471:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1351160-1351199:-1:exon

SLC25A6
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: solute carrier family 25 member 6; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: complement(1386152..1392113)
location: region:1386152-1392113:-1
so has part: feature:1386152-1392113:-1:exon
subclass of: SO_0000010

293
type: Gene
SIO_000068: ncbigene

HGNC:10992
type: HGNC
SIO_000068: hgnc

403000
type: OMIM
SIO_000068: omim

position:1386152:-1
position: 1386152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392113:-1
position: 1392113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386152-1392113:-1:exon

SLC25A6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
product: solute carrier family 25 member 6
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001636.4
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(1386152..1386759,1387279..1387419,1389241..1389727,1391899..1392113))
location: region:1386152-1392113:-1
so has part: feature:1391899-1392113:-1:exon
so has part: feature:1389241-1389727:-1:exon
so has part: feature:1387279-1387419:-1:exon
so has part: feature:1386152-1386759:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1391899-1392113:-1:exon

position:1391899:-1
position: 1391899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1389241-1389727:-1:exon

position:1389241:-1
position: 1389241
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389727:-1
position: 1389727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1387279-1387419:-1:exon

position:1387279:-1
position: 1387279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387419:-1
position: 1387419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1386152-1386759:-1:exon

position:1386759:-1
position: 1386759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC25A6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: ADP/ATP translocase 3
translation: MTEQAISFAKDFLAGGIAAAISKTAVAPIERVKLLLQVQHASKQIAADKQYKGIVDCIVRIPKEQGVLSFWRGNLANVIRYFPTQALNFAFKDKYKQIFLGGVDKHTQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKSGTEREFRGLGDCLVKITKSDGIRGLYQGFSVSVQGIIIYRAAYFGVYDTAKGMLPDPKNTHIVVSWMIAQTVTAVAGVVSYPFDTVRRRMMMQSGRKGADIMYTGTVDCWRKIFRDEGGKAFFKGAWSNVLRGMGGAFVLVLYDELKKVI
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(1386602..1386759,1387279..1387419,1389241..1389727,1391899..1392009))
location: region:1386602-1392009:-1
so has part: feature:1391899-1392009:-1:exon
so has part: feature:1389241-1389727:-1:exon
so has part: feature:1387279-1387419:-1:exon
so has part: feature:1386602-1386759:-1:exon

NP_001627.2
type: Protein
SIO_000068: ncbiprotein

CCDS14114.1
type: CCDS
SIO_000068: ccds

position:1386602:-1
position: 1386602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392009:-1
position: 1392009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391899-1392009:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1389241-1389727:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1387279-1387419:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1386602-1386759:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: N-acetylmethionine. /evidence=ECO:0007744|PubMed:22223895; propagated from UniProtKB/Swiss-Prot (P12236.4); acetylation site
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1392007..1392009)
location: region:1392007-1392009:-1
so has part: feature:1392007-1392009:-1:exon

position:1392007:-1
position: 1392007
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392007-1392009:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: N-acetylthreonine, in ADP/ATP translocase 3, N-terminally processed. /evidence=ECO:0000269|Ref.4, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:25944712; propagated from UniProtKB/Swiss-Prot (P12236.4); acetylation site
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1392004..1392006)
location: region:1392004-1392006:-1
so has part: feature:1392004-1392006:-1:exon

position:1392004:-1
position: 1392004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392006:-1
position: 1392006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392004-1392006:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); Region: Solcar 1
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(1389545..1389727,1391899..1391994))
location: region:1389545-1391994:-1
so has part: feature:1391899-1391994:-1:exon
so has part: feature:1389545-1389727:-1:exon

position:1389545:-1
position: 1389545
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391994:-1
position: 1391994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391899-1391994:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1389545-1389727:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); transmembrane region
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1391899..1391988)
location: region:1391899-1391988:-1
so has part: feature:1391899-1391988:-1:exon

position:1391988:-1
position: 1391988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391899-1391988:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: N6,N6,N6-trimethyllysine. /evidence=ECO:0000269|PubMed:31213526, ECO:0007744|PubMed:24129315; propagated from UniProtKB/Swiss-Prot (P12236.4); methylation site
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1389683..1389685)
location: region:1389683-1389685:-1
so has part: feature:1389683-1389685:-1:exon

position:1389683:-1
position: 1389683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389685:-1
position: 1389685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389683-1389685:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); transmembrane region
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1389542..1389616)
location: region:1389542-1389616:-1
so has part: feature:1389542-1389616:-1:exon

position:1389542:-1
position: 1389542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389616:-1
position: 1389616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389542-1389616:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: N6-acetyllysine. /evidence=ECO:0007744|PubMed:19608861; propagated from UniProtKB/Swiss-Prot (P12236.4); acetylation site
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1389524..1389526)
location: region:1389524-1389526:-1
so has part: feature:1389524-1389526:-1:exon

position:1389524:-1
position: 1389524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389526:-1
position: 1389526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389524-1389526:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); transmembrane region
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1389449..1389511)
location: region:1389449-1389511:-1
so has part: feature:1389449-1389511:-1:exon

position:1389449:-1
position: 1389449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389511:-1
position: 1389511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389449-1389511:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); Region: Solcar 2
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(1387415..1387419,1389241..1389508))
location: region:1387415-1389508:-1
so has part: feature:1389241-1389508:-1:exon
so has part: feature:1387415-1387419:-1:exon

position:1387415:-1
position: 1387415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389508:-1
position: 1389508
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389241-1389508:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1387415-1387419:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); transmembrane region
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1389242..1389304)
location: region:1389242-1389304:-1
so has part: feature:1389242-1389304:-1:exon

position:1389242:-1
position: 1389242
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1389304:-1
position: 1389304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1389242-1389304:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); transmembrane region
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1387325..1387387)
location: region:1387325-1387387:-1
so has part: feature:1387325-1387387:-1:exon

position:1387325:-1
position: 1387325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387387:-1
position: 1387387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387325-1387387:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); Region: Solcar 3
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(join(1386608..1386759,1387279..1387384))
location: region:1386608-1387384:-1
so has part: feature:1387279-1387384:-1:exon
so has part: feature:1386608-1386759:-1:exon

position:1386608:-1
position: 1386608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387384:-1
position: 1387384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387279-1387384:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1386608-1386759:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); Region: Important for transport activity. /evidence=ECO:0000250|UniProtKB:P12235
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1387298..1387315)
location: region:1387298-1387315:-1
so has part: feature:1387298-1387315:-1:exon

position:1387298:-1
position: 1387298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1387315:-1
position: 1387315
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1387298-1387315:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); Region: Nucleotide carrier signature motif. /evidence=ECO:0000250|UniProtKB:P02722
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1387298..1387315)
location: region:1387298-1387315:-1
so has part: feature:1387298-1387315:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1387298-1387315:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: N6-acetyllysine. /evidence=ECO:0007744|PubMed:19608861; propagated from UniProtKB/Swiss-Prot (P12236.4); acetylation site
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1386695..1386697)
location: region:1386695-1386697:-1
so has part: feature:1386695-1386697:-1:exon

position:1386695:-1
position: 1386695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386697:-1
position: 1386697
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386695-1386697:-1:exon

SLC25A6
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: AAC3
alternative label: ANT
alternative label: ANT 2
alternative label: ANT 3
alternative label: ANT3
alternative label: ANT3Y
gene: SLC25A6
gene synonym: AAC3; ANT; ANT 2; ANT 3; ANT3; ANT3Y
note: propagated from UniProtKB/Swiss-Prot (P12236.4); transmembrane region
SIO_010081: SLC25A6
subclass of: SO_0000673
so part of: SLC25A6
location: complement(1386626..1386679)
location: region:1386626-1386679:-1
so has part: feature:1386626-1386679:-1:exon

position:1386626:-1
position: 1386626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1386679:-1
position: 1386679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1386626-1386679:-1:exon

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:1510270-1510865
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1391377..1391972
location: region:1391377-1391972:1
so has part: feature:1391377-1391972:1:region

127138827
type: Gene
SIO_000068: ncbigene

position:1391377:1
position: 1391377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1391972:1
position: 1391972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391377-1391972:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG-H3K27ac-H3K4me1 hESC enhancer chrX:1510270-1510865 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive and primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive and primed)}
so part of: sequence
location: 1391377..1391972
location: region:1391377-1391972:1
so has part: feature:1391377-1391972:1:region

urn:…
SIO_000300: 1
SIO_000628: feature:1391377-1391972:1:region

misc_feature
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
standard name: NANOG-H3K27ac-H3K4me1 hESC enhancers GRCh37_chrX:1510866-1511460 and GRCh37_chrY:1460904-1461506
note: Region: biological region; Derived by automated computational analysis using gene prediction method: RefSeqFE.
so part of: sequence
location: 1391973..1392613
location: region:1391973-1392613:1
so has part: feature:1391973-1392613:1:region

127138828
type: Gene
SIO_000068: ncbigene

position:1391973:1
position: 1391973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1392613:1
position: 1392613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391973-1392613:1:region

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG-H3K27ac-H3K4me1 hESC enhancer chrX:1510866-1511460 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in naive and primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(naive and primed)}
so part of: sequence
location: 1391973..1392567
location: region:1391973-1392567:1
so has part: feature:1391973-1392567:1:region

position:1392567:1
position: 1392567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391973-1392567:1:region

LOC124900597
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
gene: LOC124900597
note: serine/arginine repetitive matrix protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1391993..1396881
location: region:1391993-1396881:1
so has part: feature:1391993-1396881:1:exon
subclass of: SO_0000010

124900597
type: Gene
SIO_000068: ncbigene

position:1391993:1
position: 1391993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1396881:1
position: 1396881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391993-1396881:1:exon

LOC124900597
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
gene: LOC124900597
product: serine/arginine repetitive matrix protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 long SRA read, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_047442787.1
SIO_010081: LOC124900597
subclass of: SO_0000673
so part of: LOC124900597
location: join(1391993..1392341,1395130..1395548,1396372..1396881)
location: region:1391993-1396881:1
so has part: feature:1391993-1392341:1:exon
so has part: feature:1395130-1395548:1:exon
so has part: feature:1396372-1396881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1391993-1392341:1:exon

position:1392341:1
position: 1392341
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1395130-1395548:1:exon

position:1395130:1
position: 1395130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1395548:1
position: 1395548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1396372-1396881:1:exon

position:1396372:1
position: 1396372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124900597
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9606
gene: LOC124900597
product: serine/arginine repetitive matrix protein 1-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 3 samples with support for all annotated introns
transcript id: XR_007068469.1
SIO_010081: LOC124900597
so part of: LOC124900597
location: join(1391993..1392341,1395130..1395548,1396372..1396515,1396610..1396881)
location: region:1391993-1396881:1
so has part: feature:1391993-1392341:1:exon
so has part: feature:1395130-1395548:1:exon
so has part: feature:1396372-1396515:1:exon
so has part: feature:1396610-1396881:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1391993-1392341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1395130-1395548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1396372-1396515:1:exon

position:1396515:1
position: 1396515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1396610-1396881:1:exon

position:1396610:1
position: 1396610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC124900597
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
gene: LOC124900597
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC124900597 isoform X2
translation: MACSVMVAGRAAEREDSRRTGAESEWRASLAQPCRRLDRKDGAATAQPLRRRRHAHSPPPRLLAPRSLAAPPGPAPHQPACLASEGCRESRCVPPRTPANRAHWLRSPETSRPAPLASARPGWTGPWCWFSVPQRGRDQSCYFQMRLARICSGRGSRPEPCNTAFPFQVCKACLRGEKKFPSMRVGTANHVQTLRPVLCVLSLQPALAWWLGDPPAGWCCLWALLKLLSEPGGCPPAWAWLPGCAWQMLLGWMDGWSAARGT
SIO_010081: LOC124900597
subclass of: SO_0000673
so part of: LOC124900597
location: join(1391993..1392341,1395130..1395548,1396372..1396392)
location: region:1391993-1396392:1
so has part: feature:1391993-1392341:1:exon
so has part: feature:1395130-1395548:1:exon
so has part: feature:1396372-1396392:1:exon

XP_047298743.1
type: Protein
SIO_000068: ncbiprotein

position:1396392:1
position: 1396392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1391993-1392341:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1395130-1395548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1396372-1396392:1:exon

regulatory
type: Feature
subclass of: SO_0000001
RO_0002162: 9606
regulatory class: enhancer
experiment: EXISTENCE:reporter gene assay evidence [ECO:0000049][PMID:30033119]
note: NANOG-H3K27ac-H3K4me1 hESC enhancer chrY:1460904-1461506 (GRCh37/hg19 assembly coordinates)
function: activates a minimal SCP1, AML or CMV promoter by ChIP-STARR-seq in primed H9 embyronic stem cells {active_cell/tissue: H9 hESC(primed)}
so part of: sequence
location: 1392011..1392613
location: region:1392011-1392613:1
so has part: feature:1392011-1392613:1:region

position:1392011:1
position: 1392011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1392011-1392613:1:region

LINC00106
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: CXYorf8
alternative label: NCRNA00106
gene: LINC00106
gene synonym: CXYorf8; NCRNA00106
note: long intergenic non-protein coding RNA 106; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1397025..1399412
location: region:1397025-1399412:1
so has part: feature:1397025-1399412:1:exon
subclass of: SO_0000011

751580
type: Gene
SIO_000068: ncbigene

HGNC:31843
type: HGNC
SIO_000068: hgnc

position:1397025:1
position: 1397025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1399412:1
position: 1399412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397025-1399412:1:exon

LINC00106
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: CXYorf8
alternative label: NCRNA00106
nc RNA class: lncRNA
gene: LINC00106
gene synonym: CXYorf8; NCRNA00106
product: long intergenic non-protein coding RNA 106
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_130733.1
SIO_010081: LINC00106
subclass of: SO_0000673
so part of: LINC00106
location: join(1397025..1397224,1398825..1398958,1399367..1399412)
location: region:1397025-1399412:1
so has part: feature:1397025-1397224:1:exon
so has part: feature:1398825-1398958:1:exon
so has part: feature:1399367-1399412:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397025-1397224:1:exon

position:1397224:1
position: 1397224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1398825-1398958:1:exon

position:1398825:1
position: 1398825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1398958:1
position: 1398958
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1399367-1399412:1:exon

position:1399367:1
position: 1399367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASMTL-AS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ASMTL-AS
alternative label: ASMTLAS
alternative label: CXYorf2
alternative label: NCRNA00105
gene: ASMTL-AS1
gene synonym: ASMTL-AS; ASMTLAS; CXYorf2; NCRNA00105
note: ASMTL antisense RNA 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
so part of: sequence
location: 1400531..1415421
location: region:1400531-1415421:1
so has part: feature:1400531-1415421:1:exon
subclass of: SO_0000011

80161
type: Gene
SIO_000068: ncbigene

HGNC:25811
type: HGNC
SIO_000068: hgnc

position:1400531:1
position: 1400531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415421:1
position: 1415421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1400531-1415421:1:exon

ASMTL-AS1
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: ASMTL-AS
alternative label: ASMTLAS
alternative label: CXYorf2
alternative label: NCRNA00105
nc RNA class: lncRNA
gene: ASMTL-AS1
gene synonym: ASMTL-AS; ASMTLAS; CXYorf2; NCRNA00105
product: ASMTL antisense RNA 1, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_026711.1
SIO_010081: ASMTL-AS1
subclass of: SO_0000673
so part of: ASMTL-AS1
location: join(1400531..1400586,1401462..1402225,1403461..1403585,1412743..1412888,1413762..1414310,1414743..1415421)
location: region:1400531-1415421:1
so has part: feature:1400531-1400586:1:exon
so has part: feature:1401462-1402225:1:exon
so has part: feature:1403461-1403585:1:exon
so has part: feature:1412743-1412888:1:exon
so has part: feature:1413762-1414310:1:exon
so has part: feature:1414743-1415421:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1400531-1400586:1:exon

position:1400586:1
position: 1400586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1401462-1402225:1:exon

position:1401462:1
position: 1401462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402225:1
position: 1402225
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1403461-1403585:1:exon

position:1403461:1
position: 1403461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1403585:1
position: 1403585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1412743-1412888:1:exon

position:1412743:1
position: 1412743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1412888:1
position: 1412888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1413762-1414310:1:exon

position:1413762:1
position: 1413762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1414310:1
position: 1414310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1414743-1415421:1:exon

position:1414743:1
position: 1414743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ASMTL-AS1
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9606
alternative label: ASMTL-AS
alternative label: ASMTLAS
alternative label: CXYorf2
alternative label: NCRNA00105
nc RNA class: lncRNA
gene: ASMTL-AS1
gene synonym: ASMTL-AS; ASMTLAS; CXYorf2; NCRNA00105
product: ASMTL antisense RNA 1, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NR_026710.1
SIO_010081: ASMTL-AS1
subclass of: SO_0000673
so part of: ASMTL-AS1
location: join(1400531..1400586,1401462..1402225,1403461..1403585,1412743..1413586)
location: region:1400531-1413586:1
so has part: feature:1400531-1400586:1:exon
so has part: feature:1401462-1402225:1:exon
so has part: feature:1403461-1403585:1:exon
so has part: feature:1412743-1413586:1:exon

position:1413586:1
position: 1413586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1400531-1400586:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1401462-1402225:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1403461-1403585:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1412743-1413586:1:exon

ASMTL
type: Gene
subclass of: SO_0000704
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: acetylserotonin O-methyltransferase like; Derived by automated computational analysis using gene prediction method: BestRefSeq,Gnomon.
so part of: sequence
location: complement(1403139..1453756)
location: region:1403139-1453756:-1
so has part: feature:1403139-1453756:-1:exon
subclass of: SO_0000010

8623
type: Gene
SIO_000068: ncbigene

HGNC:751
type: HGNC
SIO_000068: hgnc

400011
type: OMIM
SIO_000068: omim

position:1403139:-1
position: 1403139
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1453756:-1
position: 1453756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1403139-1453756:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78 ESTs, 434 long SRA reads, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 21 samples with support for all annotated introns
transcript id: XM_047442773.1
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1439097..1439144,1442186..1442317,1453618..1453756))
location: region:1403139-1453756:-1
so has part: feature:1453618-1453756:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1453618-1453756:-1:exon

position:1453618:-1
position: 1453618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

position:1442186:-1
position: 1442186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1442317:-1
position: 1442317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1439097-1439144:-1:exon

position:1439097:-1
position: 1439097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439144:-1
position: 1439144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1435022-1435083:-1:exon

position:1435022:-1
position: 1435022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435083:-1
position: 1435083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1432269-1432377:-1:exon

position:1432269:-1
position: 1432269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1432377:-1
position: 1432377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1427734-1428121:-1:exon

position:1427734:-1
position: 1427734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428121:-1
position: 1428121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1425525-1425687:-1:exon

position:1425525:-1
position: 1425525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1425687:-1
position: 1425687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1421658-1421842:-1:exon

position:1421658:-1
position: 1421658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1421842:-1
position: 1421842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1418982-1419114:-1:exon

position:1418982:-1
position: 1418982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1419114:-1
position: 1419114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1417973-1418116:-1:exon

position:1417973:-1
position: 1417973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1418116:-1
position: 1418116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1412732-1412854:-1:exon

position:1412732:-1
position: 1412732
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1412854:-1
position: 1412854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1403139-1403489:-1:exon

position:1403489:-1
position: 1403489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant 2
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001173473.2
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1439097..1439144,1442186..1442317,1453618..1453756))
location: region:1403139-1453756:-1
so has part: feature:1453618-1453756:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1453618-1453756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439097-1439144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435694-1435758:-1:exon

position:1435694:-1
position: 1435694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1435758:-1
position: 1435758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1403139-1403489:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 152 ESTs, 1372 long SRA reads, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_005274783.4
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1439097..1439144,1442186..1442317,1452748..1452906,1453618..1453756))
location: region:1403139-1453756:-1
so has part: feature:1453618-1453756:-1:exon
so has part: feature:1452748-1452906:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1453618-1453756:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1452748-1452906:-1:exon

position:1452748:-1
position: 1452748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452906:-1
position: 1452906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1439097-1439144:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1403139-1403489:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant 3
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_001173474.2
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1442186..1442317,1452748..1452909))
location: region:1403139-1452909:-1
so has part: feature:1452748-1452909:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

position:1452909:-1
position: 1452909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452748-1452909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403139-1403489:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 78 ESTs, 433 long SRA reads, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 44 samples with support for all annotated introns
transcript id: XM_047442774.1
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1439097..1439144,1442186..1442317,1452748..1452909))
location: region:1403139-1452909:-1
so has part: feature:1452748-1452909:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452748-1452909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439097-1439144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403139-1403489:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant 1
note: Derived by automated computational analysis using gene prediction method: BestRefSeq.
transcript id: NM_004192.4
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1439097..1439144,1442186..1442317,1452748..1452909))
location: region:1403139-1452909:-1
so has part: feature:1452748-1452909:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1452748-1452909:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439097-1439144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1403139-1403489:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 80 ESTs, 473 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_017030084.3
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1439097..1439144,1439395..1439556))
location: region:1403139-1439556:-1
so has part: feature:1439395-1439556:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

position:1439556:-1
position: 1439556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439395-1439556:-1:exon

position:1439395:-1
position: 1439395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1439097-1439144:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403139-1403489:-1:exon

ASMTL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
product: acetylserotonin O-methyltransferase like, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 79 ESTs, 461 long SRA reads, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XM_011545638.2
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403139..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1436056..1436213))
location: region:1403139-1436213:-1
so has part: feature:1436056-1436213:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403139-1403489:-1:exon

position:1436213:-1
position: 1436213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1436056-1436213:-1:exon

position:1436056:-1
position: 1436056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1403139-1403489:-1:exon

ASMTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: isoform 3 is encoded by transcript variant 3; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein isoform 3
translation: MVLCPVIGKLLHKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALARELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403269..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1442186..1442317,1452748..1452840))
location: region:1403269-1452840:-1
so has part: feature:1452748-1452840:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403269-1403489:-1:exon

NP_001166945.1
type: Protein
SIO_000068: ncbiprotein

CCDS55363.1
type: CCDS
SIO_000068: ccds

position:1403269:-1
position: 1403269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452840:-1
position: 1452840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452748-1452840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1403269-1403489:-1:exon

ASMTL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: isoform 1 is encoded by transcript variant 1; Derived by automated computational analysis using gene prediction method: BestRefSeq.
codon start: 1
product: probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein isoform 1
translation: MVLCPVIGKLLHKRVVLASASPRRQEILSNAGLRFEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKDLRAPDVVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNHFCKQLVKLYYPPRPEDLRRSVKHDSIPAADTFEDLSDVEGGGSEPTQRDAGSRDEKAEAGEAGQATAEAECHRTRETLPPFPTRLLELIEGFMLSKGLLTACKLKVFDLLKDEAPQKAADIASKVDASACGMERLLDICAAMGLLEKTEQGYSNTETANVYLASDGEYSLHGFIMHNNDLTWNLFTYLEFAIREGTNQHHRALGKKAEDLFQDAYYQSPETRLRFMRAMHGMTKLTACQVATAFNLSRFSSACDVGGCTGALARELAREYPRMQVTVFDLPDIIELAAHFQPPGPQAVQIHFAAGDFFRDPLPSAELYVLCRILHDWPDDKVHKLLSRVAESCKPGAGLLLVETLLDEEKRVAQRALMQSLNMLVQTEGKERSLGEYQCLLELHGFHQVQVVHLGGVLDAILATKVAP
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403269..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1439097..1439144,1442186..1442317,1452748..1452840))
location: region:1403269-1452840:-1
so has part: feature:1452748-1452840:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427734-1428121:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403269-1403489:-1:exon

NP_004183.2
type: Protein
SIO_000068: ncbiprotein

CCDS43917.1
type: CCDS
SIO_000068: ccds

urn:…
SIO_000300: 1
SIO_000628: feature:1452748-1452840:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439097-1439144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427734-1428121:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1403269-1403489:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: propagated from UniProtKB/Swiss-Prot (O95671.3); Region: MAF-like
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1427962..1428121,1432269..1432377,1435022..1435083,1435694..1435758,1439097..1439144,1442186..1442317,1452748..1452810))
location: region:1427962-1452810:-1
so has part: feature:1452748-1452810:-1:exon
so has part: feature:1442186-1442317:-1:exon
so has part: feature:1439097-1439144:-1:exon
so has part: feature:1435694-1435758:-1:exon
so has part: feature:1435022-1435083:-1:exon
so has part: feature:1432269-1432377:-1:exon
so has part: feature:1427962-1428121:-1:exon

position:1427962:-1
position: 1427962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452810:-1
position: 1452810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452748-1452810:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1442186-1442317:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1439097-1439144:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1435694-1435758:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1435022-1435083:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1432269-1432377:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1427962-1428121:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Phosphoserine. /evidence=ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569; propagated from UniProtKB/Swiss-Prot (O95671.3); phosphorylation site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1452778..1452780)
location: region:1452778-1452780:-1
so has part: feature:1452778-1452780:-1:exon

position:1452778:-1
position: 1452778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452780:-1
position: 1452780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452778-1452780:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Important for substrate specificity, for pyrophosphatase activity. /evidence=ECO:0000305|PubMed:24210219; propagated from UniProtKB/Swiss-Prot (O95671.3); other site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1452772..1452774)
location: region:1452772-1452774:-1
so has part: feature:1452772-1452774:-1:exon

position:1452772:-1
position: 1452772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1452774:-1
position: 1452774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1452772-1452774:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Important for substrate specificity, for pyrophosphatase activity. /evidence=ECO:0000305|PubMed:24210219; propagated from UniProtKB/Swiss-Prot (O95671.3); other site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1439103..1439105)
location: region:1439103-1439105:-1
so has part: feature:1439103-1439105:-1:exon

position:1439103:-1
position: 1439103
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1439105:-1
position: 1439105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1439103-1439105:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Important for substrate specificity, for pyrophosphatase activity. /evidence=ECO:0000305|PubMed:24210219; propagated from UniProtKB/Swiss-Prot (O95671.3); other site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1428094..1428096)
location: region:1428094-1428096:-1
so has part: feature:1428094-1428096:-1:exon

position:1428094:-1
position: 1428094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1428096:-1
position: 1428096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1428094-1428096:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Phosphoserine. /evidence=ECO:0007744|PubMed:24275569; propagated from UniProtKB/Swiss-Prot (O95671.3); phosphorylation site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1427947..1427949)
location: region:1427947-1427949:-1
so has part: feature:1427947-1427949:-1:exon

position:1427947:-1
position: 1427947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427949:-1
position: 1427949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427947-1427949:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Phosphothreonine. /evidence=ECO:0007744|PubMed:24275569; propagated from UniProtKB/Swiss-Prot (O95671.3); phosphorylation site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1427929..1427931)
location: region:1427929-1427931:-1
so has part: feature:1427929-1427931:-1:exon

position:1427929:-1
position: 1427929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427931:-1
position: 1427931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427929-1427931:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: propagated from UniProtKB/Swiss-Prot (O95671.3); Region: Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1427794..1427928)
location: region:1427794-1427928:-1
so has part: feature:1427794-1427928:-1:exon

position:1427794:-1
position: 1427794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427928:-1
position: 1427928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427794-1427928:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Phosphoserine. /evidence=ECO:0007744|PubMed:17081983, ECO:0007744|PubMed:18318008, ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:18691976, ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569; propagated from UniProtKB/Swiss-Prot (O95671.3); phosphorylation site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1427914..1427916)
location: region:1427914-1427916:-1
so has part: feature:1427914-1427916:-1:exon

position:1427914:-1
position: 1427914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427916:-1
position: 1427916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427914-1427916:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: propagated from UniProtKB/Swiss-Prot (O95671.3); Region: ASMT-like
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(join(1403272..1403489,1412732..1412854,1417973..1418116,1418982..1419114,1421658..1421842,1425525..1425687,1427734..1427802))
location: region:1403272-1427802:-1
so has part: feature:1427734-1427802:-1:exon
so has part: feature:1425525-1425687:-1:exon
so has part: feature:1421658-1421842:-1:exon
so has part: feature:1418982-1419114:-1:exon
so has part: feature:1417973-1418116:-1:exon
so has part: feature:1412732-1412854:-1:exon
so has part: feature:1403272-1403489:-1:exon

position:1403272:-1
position: 1403272
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1427802:-1
position: 1427802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1427734-1427802:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1425525-1425687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1421658-1421842:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1418982-1419114:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1417973-1418116:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1412732-1412854:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1403272-1403489:-1:exon

ASMTL
type: Miscellaneous Feature
subclass of: SO_0000001
RO_0002162: 9606
alternative label: ASMTLX
alternative label: ASMTLY
alternative label: ASTML
gene: ASMTL
gene synonym: ASMTLX; ASMTLY; ASTML
note: Phosphoserine. /evidence=ECO:0007744|PubMed:23186163; propagated from UniProtKB/Swiss-Prot (O95671.3); phosphorylation site
SIO_010081: ASMTL
subclass of: SO_0000673
so part of: ASMTL
location: complement(1419097..1419099)
location: region:1419097-1419099:-1
so has part: feature:1419097-1419099:-1:exon