Bacteriovorax stolpii strain AC01 chromosome, complete genome.
Bacteria; Bdellovibrionota; Bacteriovoracia; Bacteriovoracales; Bacteriovoracaceae; Bacteriovorax.
Submitted (13-JUN-2018) Biology, Providence College, 1 Cunningham Square, Providence, RI 02908, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP030035.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\nBacteria and source DNA available from Laura Williams, Providence\nCollege, 1 Cunningham Square, Providence, RI, 02918.\n\n##Genome-Assembly-Data-START##\nAssembly Date :: 11-SEP-2017\nAssembly Method :: HGAP v. 3; Pilon v. 1.22\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 268.0x\nSequencing Technology :: Illumina; PacBio\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 02/10/2023 17:48:16\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 3,874\nCDSs (total) :: 3,833\nGenes (coding) :: 3,825\nCDSs (with protein) :: 3,825\nGenes (RNA) :: 41\nrRNAs :: 2, 2, 2 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 2, 2 (5S, 16S, 23S)\ntRNAs :: 32\nncRNAs :: 3\nPseudo Genes (total) :: 8\nCDSs (without protein) :: 8\nPseudo Genes (ambiguous residues) :: 0 of 8\nPseudo Genes (frameshifted) :: 0 of 8\nPseudo Genes (incomplete) :: 8 of 8\nPseudo Genes (internal stop) :: 0 of 8\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: ab initio prediction:GeneMarkS-2+
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]
GO:0006270 - DNA replication initiation [Evidence IEA]; GO:0006275 - regulation of DNA replication [Evidence IEA]
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
chromosomal replication initiator protein DnaA
COORDINATES: similar to AA sequence:RefSeq:WP_014245960.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF013022.2
GO:0004526 - ribonuclease P activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002474682.1
membrane protein insertion efficiency factor YidD
COORDINATES: protein motif:HMM:TIGR03592.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0051205 - protein insertion into membrane [Evidence IEA]
COORDINATES: protein motif:HMM:NF021882.2
COORDINATES: protein motif:HMM:TIGR00136.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]; GO:0002098 - tRNA wobble uridine modification [Evidence IEA]
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
COORDINATES: protein motif:HMM:NF014575.2
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]
GO:0006364 - rRNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012096464.1
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00180.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245952.1
COORDINATES: protein motif:HMM:NF017242.2
COORDINATES: protein motif:HMM:NF012439.2
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism [Evidence IEA]
GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00962.1
GO:0000275 - mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [Evidence IEA]; GO:0045262 - plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]; GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01146.1
COORDINATES: similar to AA sequence:RefSeq:WP_020045332.1
COORDINATES: protein motif:HMM:TIGR01216.1
COORDINATES: protein motif:HMM:NF013862.2
GO:0006629 - lipid metabolic process [Evidence IEA]
patatin-like phospholipase family protein
COORDINATES: protein motif:HMM:NF005932.1
GO:0003911 - DNA ligase (NAD+) activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00416.1
COORDINATES: protein motif:HMM:NF000756.0
GO:0004370 - glycerol kinase activity [Evidence IEA]
GO:0006071 - glycerol metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012787.2
COORDINATES: protein motif:HMM:NF019274.2
COORDINATES: protein motif:HMM:TIGR01224.1
GO:0050480 - imidazolonepropionase activity [Evidence IEA]
GO:0006548 - histidine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003820.0
GO:0016153 - urocanate hydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245932.1
GO:0004397 - histidine ammonia-lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01163.1
GO:0004750 - D-ribulose-phosphate 3-epimerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00460.1
GO:0004479 - methionyl-tRNA formyltransferase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018986756.1
GO:0042586 - peptide deformylase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015684.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245924.1
GO:0003983 - UTP:glucose-1-phosphate uridylyltransferase activity [Evidence IEA]
GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA]
UTP--glucose-1-phosphate uridylyltransferase GalU
COORDINATES: protein motif:HMM:TIGR00595.1
GO:0005658 - alpha DNA polymerase:primase complex [Evidence IEA]
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003688 - DNA replication origin binding [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
COORDINATES: protein motif:HMM:NF013106.2
transglycosylase domain-containing protein
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: similar to AA sequence:RefSeq:WP_014245919.1
COORDINATES: protein motif:HMM:NF013368.2
GO:0004045 - aminoacyl-tRNA hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019469841.1
COORDINATES: protein motif:HMM:NF014503.2
COORDINATES: protein motif:HMM:NF013618.2
lytic transglycosylase domain-containing protein
COORDINATES: protein motif:HMM:NF022077.2
COORDINATES: protein motif:HMM:NF007494.0
GO:0000049 - tRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020457.2
COORDINATES: protein motif:HMM:NF012738.2
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012235.2
COORDINATES: protein motif:HMM:NF024772.2
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012711.2
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF015049.2
COORDINATES: protein motif:HMM:NF013200.2
electron transfer flavoprotein subunit alpha/FixB family protein
electron transfer flavoprotein subunit beta/FixA family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245908.1
GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01498.1
GO:0003848 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity [Evidence IEA]
GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA]
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
COORDINATES: protein motif:HMM:NF013630.2
LysM peptidoglycan-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: protein motif:HMM:NF012695.2
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245897.1
COORDINATES: protein motif:HMM:NF017076.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245894.1
sigma-54 dependent transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00077.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013915.2
GO:0008961 - phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity [Evidence IEA]
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]
prolipoprotein diacylglyceryl transferase
COORDINATES: protein motif:HMM:NF012245.2
COORDINATES: protein motif:HMM:NF024247.2
4Fe-4S dicluster domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245891.1
GO:0016866 - intramolecular transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00636.1
GO:0008817 - corrinoid adenosyltransferase activity [Evidence IEA]
GO:0009236 - cobalamin biosynthetic process [Evidence IEA]
cob(I)yrinic acid a,c-diamide adenosyltransferase
COORDINATES: protein motif:HMM:NF028007.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245888.1
iron-sulfur cluster assembly accessory protein
COORDINATES: protein motif:HMM:NF013720.2
COORDINATES: protein motif:HMM:TIGR04267.2
HEXXH motif-containing putative peptide modification protein
COORDINATES: protein motif:HMM:NF013100.2
GO:0008658 - penicillin binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012301.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00229.1
COORDINATES: protein motif:HMM:NF021523.2
COORDINATES: protein motif:HMM:NF012398.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016822.2
COORDINATES: protein motif:HMM:NF012428.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
aminotransferase class III-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF012257.2
cyclic nucleotide-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013740.2
COORDINATES: protein motif:HMM:TIGR03302.1
GO:0019867 - outer membrane [Evidence IEA]
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]
outer membrane protein assembly factor BamD
COORDINATES: protein motif:HMM:NF024299.2
COORDINATES: protein motif:HMM:NF014660.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245873.1
GO:0006402 - mRNA catabolic process [Evidence IEA]; GO:0006109 - regulation of carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02550.1
GO:0009424 - bacterial-type flagellum hook [Evidence IEA]
GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02492.1
COORDINATES: protein motif:HMM:NF016985.2
GO:0005515 - protein binding [Evidence IEA]
GO:0044780 - bacterial-type flagellum assembly [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03824.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
flagellar biosynthesis anti-sigma factor FlgM
COORDINATES: protein motif:HMM:NF003676.1
flagellar basal body P-ring protein FlgI
COORDINATES: protein motif:HMM:NF014195.2
GO:0009427 - bacterial-type flagellum basal body, distal rod, L ring [Evidence IEA]
GO:0003774 - cytoskeletal motor activity [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]
flagellar basal body L-ring protein FlgH
COORDINATES: protein motif:HMM:NF024544.2
flagella basal body P-ring formation protein FlgA
COORDINATES: similar to AA sequence:RefSeq:WP_014245864.1
GO:0009426 - bacterial-type flagellum basal body, distal rod [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03506.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245862.1
GO:0009318 - exodeoxyribonuclease VII complex [Evidence IEA]
GO:0008855 - exodeoxyribonuclease VII activity [Evidence IEA]
GO:0006308 - DNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02074.1
COORDINATES: protein motif:HMM:NF024503.2
COORDINATES: similar to AA sequence:RefSeq:WP_005123344.1
GO:0003824 - catalytic activity [Evidence IEA]
GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA]
COORDINATES: protein motif:HMM:NF001567.0
GO:0004047 - aminomethyltransferase activity [Evidence IEA]
glycine cleavage system aminomethyltransferase GcvT
COORDINATES: protein motif:HMM:NF014881.2
bifunctional 5,10-methylenetetrahydrofolate dehydrogenase/5,10-methenyltetrahydrofolate cyclohydrolase
COORDINATES: protein motif:HMM:TIGR00228.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]
crossover junction endodeoxyribonuclease RuvC
COORDINATES: protein motif:HMM:NF025873.2
Holliday junction branch migration protein RuvA
COORDINATES: similar to AA sequence:RefSeq:WP_014245852.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0009378 - four-way junction helicase activity [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
Holliday junction branch migration DNA helicase RuvB
COORDINATES: similar to AA sequence:RefSeq:WP_014245849.1
GO:0016790 - thiolester hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012783.2
ATP-dependent Clp protease proteolytic subunit
COORDINATES: protein motif:HMM:TIGR00325.1
GO:0008759 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity [Evidence IEA]
GO:0009245 - lipid A biosynthetic process [Evidence IEA]
UDP-3-O-acyl-N-acetylglucosamine deacetylase
COORDINATES: protein motif:HMM:NF006625.0
GO:0002161 - aminoacyl-tRNA editing activity [Evidence IEA]; GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]; GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012797.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245821.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012793.2
GO:0015450 - protein-transporting ATPase activity [Evidence IEA]
GO:0043952 - protein transport by the Sec complex [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245831.1
GO:0006353 - DNA-templated transcription termination [Evidence IEA]
transcription termination/antitermination protein NusG
COORDINATES: similar to AA sequence:RefSeq:WP_014245830.1
COORDINATES: similar to AA sequence:RefSeq:WP_005017241.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000311 - plastid large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF000955.1
GO:0015934 - large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_005122872.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245826.1
GO:0000345 - cytosolic DNA-directed RNA polymerase complex [Evidence IEA]
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
DNA-directed RNA polymerase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_014245825.1
DNA-directed RNA polymerase subunit beta'
COORDINATES: similar to AA sequence:RefSeq:WP_000246374.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_002006497.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245822.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245819.1
GO:0003723 - RNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245818.1
COORDINATES: protein motif:HMM:TIGR03953.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF004363.0
COORDINATES: similar to AA sequence:RefSeq:WP_014245815.1
COORDINATES: similar to AA sequence:RefSeq:WP_001138114.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245813.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245812.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000312 - plastid small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013340739.1
COORDINATES: protein motif:HMM:NF013027.2
COORDINATES: similar to AA sequence:RefSeq:WP_018986270.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011567679.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245807.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245806.1
COORDINATES: similar to AA sequence:RefSeq:WP_011245027.1
COORDINATES: similar to AA sequence:RefSeq:WP_010262415.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245803.1
GO:0019843 - rRNA binding [Evidence IEA]; GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245802.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245801.1
COORDINATES: similar to AA sequence:RefSeq:WP_007861725.1
COORDINATES: protein motif:HMM:TIGR01071.1
COORDINATES: protein motif:HMM:TIGR00967.1
COORDINATES: protein motif:HMM:TIGR01351.1
COORDINATES: similar to AA sequence:RefSeq:WP_003130554.1
GO:0003743 - translation initiation factor activity [Evidence IEA]
GO:0006413 - translational initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_020322760.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245794.1
COORDINATES: similar to AA sequence:RefSeq:WP_001029758.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245792.1
DNA-directed RNA polymerase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014245791.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0005762 - mitochondrial large ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF020123.2
GO:0016209 - antioxidant activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF025885.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: protein motif:HMM:NF013799.2
COORDINATES: protein motif:HMM:NF020650.2
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245788.1
COORDINATES: protein motif:HMM:NF014805.2
biotin carboxylase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012584.2
COORDINATES: protein motif:HMM:NF033640.1
twitch domain-containing radical SAM protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245770.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]
methylmalonyl Co-A mutase-associated GTPase MeaB
COORDINATES: similar to AA sequence:RefSeq:WP_014245769.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004494 - methylmalonyl-CoA mutase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: protein motif:HMM:NF017239.2
COORDINATES: protein motif:HMM:NF014589.2
carbamoyltransferase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF013227.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF025253.2
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: protein motif:HMM:NF012488.2
COORDINATES: protein motif:HMM:NF039992.1
COORDINATES: protein motif:HMM:NF017345.2
FdtA/QdtA family cupin domain-containing protein
DegT/DnrJ/EryC1/StrS family aminotransferase
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:NF024629.2
radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF014798.2
transketolase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245678.1
GO:0008661 - 1-deoxy-D-xylulose-5-phosphate synthase activity [Evidence IEA]
GO:0016114 - terpenoid biosynthetic process [Evidence IEA]
1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF039953.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013257.2
GO:0016757 - glycosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024747.2
COORDINATES: protein motif:HMM:NF014081.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017044.2
COORDINATES: protein motif:HMM:TIGR00539.1
GO:0051989 - coproporphyrinogen dehydrogenase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF013245.2
COORDINATES: protein motif:HMM:NF015722.2
SUMF1/EgtB/PvdO family nonheme iron enzyme
COORDINATES: protein motif:HMM:NF024863.2
GDSL-type esterase/lipase family protein
COORDINATES: protein motif:HMM:NF005548.0
COORDINATES: protein motif:HMM:NF016974.2
GO:0018193 - peptidyl-amino acid modification [Evidence IEA]
aspartyl/asparaginyl beta-hydroxylase domain-containing protein
COORDINATES: protein motif:HMM:NF019077.2
COORDINATES: protein motif:HMM:NF016041.2
GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
GO:0008610 - lipid biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015445.2
TRAP transporter substrate-binding protein DctP
COORDINATES: protein motif:HMM:NF014069.2
COORDINATES: protein motif:HMM:NF013212.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245762.1
GO:0006457 - protein folding [Evidence IEA]; GO:0009408 - response to heat [Evidence IEA]
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF005500.0
GO:0008714 - AMP nucleosidase activity [Evidence IEA]
GO:0044209 - AMP salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245756.1
COORDINATES: protein motif:HMM:NF013126.2
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: protein motif:HMM:NF014678.2
COORDINATES: protein motif:HMM:NF018884.2
GO:0016791 - phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00121.1
GO:0004077 - biotin-[acetyl-CoA-carboxylase] ligase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245742.1
GO:0004549 - tRNA-specific ribonuclease activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00042.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:NF002921.0
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF008229.0
GO:0015035 - protein-disulfide reductase activity [Evidence IEA]
GO:0006662 - glycerol ether metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013706.2
fumarylacetoacetate hydrolase family protein
COORDINATES: protein motif:HMM:TIGR02168.1
GO:0030261 - chromosome condensation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF013098.2
COORDINATES: protein motif:HMM:NF012340.2
COORDINATES: protein motif:HMM:NF013539.2
COORDINATES: protein motif:HMM:TIGR00221.1
GO:0008448 - N-acetylglucosamine-6-phosphate deacetylase activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]
N-acetylglucosamine-6-phosphate deacetylase
COORDINATES: protein motif:HMM:NF013986.2
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: protein motif:HMM:NF015510.2
outer membrane lipoprotein carrier protein LolA
COORDINATES: protein motif:HMM:TIGR00089.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0008172 - S-methyltransferase activity [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
GO:0018339 - peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid [Evidence IEA]
30S ribosomal protein S12 methylthiotransferase RimO
COORDINATES: protein motif:HMM:NF017183.2
COORDINATES: protein motif:HMM:NF012385.2
COORDINATES: protein motif:HMM:NF012379.2
COORDINATES: protein motif:HMM:TIGR00064.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR02727.1
GO:0030272 - 5-formyltetrahydrofolate cyclo-ligase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245716.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
GO:0006402 - mRNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012334.2
COORDINATES: protein motif:HMM:NF013380.2
tRNA-dihydrouridine synthase family protein
COORDINATES: protein motif:HMM:NF012514.2
COORDINATES: protein motif:HMM:NF013741.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245031.1
COORDINATES: protein motif:HMM:NF012339.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245704.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245702.1
dehydrogenase E1 component subunit alpha/beta
COORDINATES: similar to AA sequence:RefSeq:WP_020649397.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: protein motif:HMM:NF015714.2
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: protein motif:HMM:TIGR00551.1
GO:0008734 - L-aspartate oxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024986.2
COORDINATES: protein motif:HMM:NF024835.2
helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00010
Derived by automated computational analysis using gene prediction method: cmsearch.
transglycosylase SLT domain-containing protein
COORDINATES: protein motif:HMM:TIGR00033.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013887.2
3-dehydroquinate synthase family protein
COORDINATES: protein motif:HMM:NF012497.2
COORDINATES: protein motif:HMM:NF013756.2
COORDINATES: protein motif:HMM:NF013696.2
COORDINATES: protein motif:HMM:NF024836.2
COORDINATES: protein motif:HMM:NF013702.2
lysophospholipid acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014242963.1
GO:0004411 - homogentisate 1,2-dioxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006570 - tyrosine metabolic process [Evidence IEA]
GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01141.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015690.2
COORDINATES: protein motif:HMM:NF024895.2
COORDINATES: protein motif:HMM:NF012632.2
COORDINATES: protein motif:HMM:NF028237.2
COORDINATES: protein motif:HMM:NF021982.2
COORDINATES: protein motif:HMM:NF012707.2
transporter substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF025330.2
COORDINATES: protein motif:HMM:TIGR00652.1
GO:0008837 - diaminopimelate epimerase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF024779.2
COORDINATES: protein motif:HMM:NF022666.2
COORDINATES: protein motif:HMM:NF025854.2
HAMP domain-containing sensor histidine kinase
COORDINATES: protein motif:HMM:NF013331.2
COORDINATES: protein motif:HMM:NF013315.2
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00478.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245615.1
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245614.1
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: protein motif:HMM:NF012296.2
GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF012770.2
COORDINATES: protein motif:HMM:NF015961.2
COORDINATES: protein motif:HMM:NF015150.2
COORDINATES: protein motif:HMM:TIGR03718.1
COORDINATES: protein motif:HMM:NF015431.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF037527.2
COORDINATES: protein motif:HMM:NF012722.2
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]
histidine kinase dimerization/phospho-acceptor domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014243289.1
GO:0004491 - methylmalonate-semialdehyde dehydrogenase (acylating) activity [Evidence IEA]
GO:0006574 - valine catabolic process [Evidence IEA]
CoA-acylating methylmalonate-semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014243290.1
GO:0003935 - GTP cyclohydrolase II activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243291.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243292.1
GO:0004845 - uracil phosphoribosyltransferase activity [Evidence IEA]
GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243293.1
GO:0004849 - uridine kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244002.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244003.1
COORDINATES: protein motif:HMM:NF015509.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243541.1
GO:0016433 - rRNA (adenine) methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0031167 - rRNA methylation [Evidence IEA]
23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN
COORDINATES: protein motif:HMM:NF017747.2
COORDINATES: protein motif:HMM:NF024777.2
COORDINATES: similar to AA sequence:RefSeq:WP_019454693.1
COORDINATES: protein motif:HMM:NF020157.2
COORDINATES: protein motif:HMM:NF024880.2
COORDINATES: protein motif:HMM:NF013936.2
COORDINATES: protein motif:HMM:NF017807.2
COORDINATES: protein motif:HMM:NF024809.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF013382.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015953.2
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: protein motif:HMM:NF013736.2
COORDINATES: protein motif:HMM:NF013460.2
GO:0009055 - electron transfer activity [Evidence IEA]
cytochrome b/b6 domain-containing protein
COORDINATES: protein motif:HMM:NF025051.2
COORDINATES: protein motif:HMM:NF013357.2
COORDINATES: protein motif:HMM:NF012422.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF004629.0
GO:0003678 - DNA helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013672.2
GO:0016810 - hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [Evidence IEA]
polysaccharide deacetylase family protein
COORDINATES: protein motif:HMM:NF016972.2
COORDINATES: protein motif:HMM:NF024803.2
heavy metal-responsive transcriptional regulator
COORDINATES: protein motif:HMM:NF041414.1
ArsI/CadI family heavy metal resistance metalloenzyme
COORDINATES: similar to AA sequence:RefSeq:WP_014245059.1
COORDINATES: protein motif:HMM:TIGR00832.1
GO:0008490 - arsenite secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: protein motif:HMM:NF014639.2
COORDINATES: protein motif:HMM:NF013045.2
COORDINATES: protein motif:HMM:NF018504.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245583.1
COORDINATES: protein motif:HMM:NF012790.2
rhodanese-like domain-containing protein
COORDINATES: protein motif:HMM:NF016241.2
COORDINATES: similar to AA sequence:RefSeq:WP_000022439.1
GO:0008381 - mechanosensitive monoatomic ion channel activity [Evidence IEA]
GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA]
large conductance mechanosensitive channel protein MscL
COORDINATES: protein motif:HMM:NF024841.2
esterase-like activity of phytase family protein
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245578.1
COORDINATES: protein motif:HMM:NF016648.2
COORDINATES: protein motif:HMM:NF008909.0
GO:0008797 - aspartate ammonia-lyase activity [Evidence IEA]
GO:0006520 - amino acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245574.1
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01307.1
GO:0046537 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity [Evidence IEA]
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013856.2
COORDINATES: protein motif:HMM:NF022137.2
COORDINATES: protein motif:HMM:NF012656.2
formylglycine-generating enzyme family protein
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: similar to AA sequence:RefSeq:WP_018054575.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004051.0
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0009052 - pentose-phosphate shunt, non-oxidative branch [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245563.1
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014245557.1
COORDINATES: protein motif:HMM:NF017081.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245555.1
COORDINATES: protein motif:HMM:NF016289.2
COORDINATES: protein motif:HMM:NF012493.2
COORDINATES: protein motif:HMM:NF016212.2
COORDINATES: protein motif:HMM:NF019315.2
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245545.1
PLP-dependent aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: protein motif:HMM:NF020460.2
GO:0004357 - glutamate-cysteine ligase activity [Evidence IEA]
GO:0006750 - glutathione biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: protein motif:HMM:NF019494.2
polyhydroxyalkanoate synthesis regulator DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024824.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245534.1
COORDINATES: protein motif:HMM:NF008453.0
GO:0015833 - peptide transport [Evidence IEA]
dipeptide ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013869.2
COORDINATES: protein motif:HMM:NF013694.2
COORDINATES: protein motif:HMM:NF024854.2
COORDINATES: protein motif:HMM:NF012565.2
GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]
COORDINATES: protein motif:HMM:NF012786.2
GO:0015473 - fimbrial usher porin activity [Evidence IEA]
GO:0009297 - pilus assembly [Evidence IEA]
fimbria/pilus outer membrane usher protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245527.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF015022.2
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
COORDINATES: protein motif:HMM:NF027363.2
GO:0016872 - intramolecular lyase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243139.1
GO:0006950 - response to stress [Evidence IEA]; GO:0006412 - translation [Evidence IEA]
ABC-F family ATP-binding cassette domain-containing protein
COORDINATES: protein motif:HMM:NF014698.2
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: protein motif:HMM:NF013933.2
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02320.1
GO:0050188 - phosphoenolpyruvate mutase activity [Evidence IEA]
GO:0019634 - organic phosphonate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03297.1
GO:0033980 - phosphonopyruvate decarboxylase activity [Evidence IEA]
GO:0017000 - antibiotic biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF010006.0
GO:0047304 - 2-aminoethylphosphonate-pyruvate transaminase activity [Evidence IEA]
GO:0019700 - organic phosphonate catabolic process [Evidence IEA]
2-aminoethylphosphonate--pyruvate transaminase
COORDINATES: protein motif:HMM:NF016800.2
COORDINATES: protein motif:HMM:NF022007.2
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:NF013722.2
COORDINATES: protein motif:HMM:TIGR01691.1
GO:0016862 - intramolecular oxidoreductase activity, interconverting keto- and enol-groups [Evidence IEA]; GO:0016791 - phosphatase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: protein motif:HMM:NF015065.2
COORDINATES: protein motif:HMM:TIGR03328.1
GO:0016835 - carbon-oxygen lyase activity [Evidence IEA]
methylthioribulose 1-phosphate dehydratase
COORDINATES: protein motif:HMM:NF006569.0
COORDINATES: protein motif:HMM:NF013069.2
COORDINATES: protein motif:HMM:NF014385.2
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: protein motif:HMM:TIGR00357.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_014243144.1
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: protein motif:HMM:NF024436.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF024583.2
COORDINATES: protein motif:HMM:NF024252.2
helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF019459.2
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: protein motif:HMM:NF013053.2
COORDINATES: protein motif:HMM:NF012861.2
aminotransferase class V-fold PLP-dependent enzyme
ATP-dependent helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF021981.2
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]; GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF025457.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245603.1
COORDINATES: protein motif:HMM:TIGR00071.1
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243812.1
COORDINATES: protein motif:HMM:NF017532.2
phytanoyl-CoA dioxygenase family protein
COORDINATES: protein motif:HMM:NF019224.2
COORDINATES: protein motif:HMM:NF015534.2
COORDINATES: protein motif:HMM:NF013530.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF015915.2
COORDINATES: protein motif:HMM:TIGR03598.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosome biogenesis GTP-binding protein YihA/YsxC
COORDINATES: protein motif:HMM:TIGR00255.1
COORDINATES: protein motif:HMM:TIGR03263.1
GO:0004385 - guanylate kinase activity [Evidence IEA]
GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243192.1
bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF014724.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243196.1
GO:0019239 - deaminase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243197.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00059
TPP riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF021348.2
energy-coupling factor transporter transmembrane component T
COORDINATES: similar to AA sequence:RefSeq:WP_014243199.1
LysR substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF024698.2
COORDINATES: protein motif:HMM:TIGR00456.1
GO:0004814 - arginine-tRNA ligase activity [Evidence IEA]
GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014608.2
COORDINATES: protein motif:HMM:TIGR00763.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021639.2
COORDINATES: protein motif:HMM:NF014896.2
COORDINATES: protein motif:HMM:NF025070.2
COORDINATES: protein motif:HMM:NF014279.2
COORDINATES: protein motif:HMM:NF016701.2
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase MtaB
COORDINATES: protein motif:HMM:NF015679.2
GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013134.2
COORDINATES: protein motif:HMM:TIGR02965.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]; GO:0004854 - xanthine dehydrogenase activity [Evidence IEA]
GO:0009115 - xanthine catabolic process [Evidence IEA]
xanthine dehydrogenase molybdopterin binding subunit
COORDINATES: protein motif:HMM:TIGR02964.1
GO:0043546 - molybdopterin cofactor binding [Evidence IEA]
GO:0065003 - protein-containing complex assembly [Evidence IEA]; GO:0009115 - xanthine catabolic process [Evidence IEA]
xanthine dehydrogenase accessory protein XdhC
COORDINATES: protein motif:HMM:NF024989.2
COORDINATES: protein motif:HMM:NF025595.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243215.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012607.2
COORDINATES: protein motif:HMM:NF025793.2
COORDINATES: protein motif:HMM:TIGR00194.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:NF015146.2
COORDINATES: protein motif:HMM:TIGR02669.1
COORDINATES: protein motif:HMM:NF013670.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243250.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244703.1
COORDINATES: protein motif:HMM:NF015693.2
GO:0009425 - bacterial-type flagellum basal body [Evidence IEA]
GO:0071973 - bacterial-type flagellum-dependent cell motility [Evidence IEA]; GO:0006935 - chemotaxis [Evidence IEA]
flagellar basal body-associated FliL family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014243253.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243254.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF016250.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243256.1
The bacterial flagellar biogenesis protein FliP forms a type III secretion system (T3SS)-type pore required for flagellar assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.
flagellar type III secretion system pore protein FliP
COORDINATES: similar to AA sequence:RefSeq:WP_014243257.1
COORDINATES: protein motif:HMM:NF013478.2
COORDINATES: protein motif:HMM:TIGR00328.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243260.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243263.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
FliA/WhiG family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:TIGR03696.1
RHS repeat-associated core domain-containing protein
COORDINATES: protein motif:HMM:NF016362.2
COORDINATES: protein motif:HMM:NF033516.0
GO:0004803 - transposase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013677.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
COORDINATES: protein motif:HMM:NF019229.2
COORDINATES: protein motif:HMM:NF015291.2
GH3 auxin-responsive promoter family protein
COORDINATES: protein motif:HMM:NF039236.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: protein motif:HMM:NF025736.2
COORDINATES: protein motif:HMM:TIGR00152.1
GO:0004140 - dephospho-CoA kinase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
Dephospho-CoA kinase (CoaE) performs the final step in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF007113.1
nucleoside triphosphate pyrophosphohydrolase
COORDINATES: protein motif:HMM:NF014216.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_096908578.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:TIGR03303.1
GO:0009279 - cell outer membrane [Evidence IEA]
outer membrane protein assembly factor BamA
COORDINATES: protein motif:HMM:NF015871.2
COORDINATES: protein motif:HMM:TIGR01853.1
GO:0016410 - N-acyltransferase activity [Evidence IEA]
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase
COORDINATES: protein motif:HMM:NF019589.2
3-hydroxyacyl-ACP dehydratase FabZ family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014243277.1
GO:0008780 - acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity [Evidence IEA]
acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase
COORDINATES: protein motif:HMM:NF014893.2
COORDINATES: protein motif:HMM:TIGR00215.1
GO:0008915 - lipid-A-disaccharide synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014645.2
GO:0009029 - tetraacyldisaccharide 4'-kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022750.2
COORDINATES: protein motif:HMM:NF017519.2
YiiX/YebB-like N1pC/P60 family cysteine hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_014243283.1
COORDINATES: protein motif:HMM:TIGR02147.1
GO:0005575 - cellular_component [Evidence IEA]
GO:0008150 - biological_process [Evidence IEA]
COORDINATES: protein motif:HMM:NF021788.2
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF012792.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243330.1
COORDINATES: protein motif:HMM:NF017686.2
GO:0003995 - acyl-CoA dehydrogenase activity [Evidence IEA]
GO:0008218 - bioluminescence [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:TIGR00018.1
GO:0004592 - pantoate-beta-alanine ligase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_014243564.1
COORDINATES: protein motif:HMM:NF012479.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: protein motif:HMM:NF024491.2
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: protein motif:HMM:NF013222.2
GO:0003908 - methylated-DNA-[protein]-cysteine S-methyltransferase activity [Evidence IEA]
methylated-DNA--[protein]-cysteine S-methyltransferase
COORDINATES: protein motif:HMM:NF013346.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: protein motif:HMM:NF016141.2
GlsB/YeaQ/YmgE family stress response membrane protein
COORDINATES: protein motif:HMM:NF018184.2
COORDINATES: protein motif:HMM:NF017897.2
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF022592.2
COORDINATES: protein motif:HMM:NF025029.2
murein L,D-transpeptidase catalytic domain family protein
COORDINATES: protein motif:HMM:NF015743.2
GO:0017128 - phospholipid scramblase activity [Evidence IEA]
GO:0017121 - plasma membrane phospholipid scrambling [Evidence IEA]
COORDINATES: protein motif:HMM:NF024950.2
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF014082.2
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_014245356.1
COORDINATES: protein motif:HMM:NF013607.2
low molecular weight protein-tyrosine-phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014245354.1
GO:0003711 - transcription elongation factor activity [Evidence IEA]
GO:0006354 - DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF039364.1
COORDINATES: protein motif:HMM:TIGR01951.1
transcription antitermination factor NusB
COORDINATES: similar to AA sequence:RefSeq:WP_014245348.1
GO:0140110 - transcription regulator activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245345.1
COORDINATES: similar to AA sequence:RefSeq:WP_019882197.1
GO:0004315 - 3-oxoacyl-[acyl-carrier-protein] synthase activity [Evidence IEA]
GO:0006633 - fatty acid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245343.1
GO:0000036 - acyl carrier activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245342.1
COORDINATES: protein motif:HMM:TIGR00128.1
GO:0004314 - [acyl-carrier-protein] S-malonyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245340.1
COORDINATES: protein motif:HMM:NF013908.2
COORDINATES: protein motif:HMM:NF014657.2
COORDINATES: protein motif:HMM:NF013375.2
COORDINATES: protein motif:HMM:TIGR00492.1
GO:0008784 - alanine racemase activity [Evidence IEA]
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00056.1
COORDINATES: protein motif:HMM:NF014523.2
COORDINATES: protein motif:HMM:NF013468.2
GO:0003725 - double-stranded RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF017103.2
COORDINATES: protein motif:HMM:TIGR00029.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245322.1
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245321.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245320.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245315.1
COORDINATES: protein motif:HMM:NF025597.2
COORDINATES: protein motif:HMM:NF023568.2
COORDINATES: protein motif:HMM:NF019334.2
COORDINATES: protein motif:HMM:NF003742.0
pyruvate, water dikinase regulatory protein
COORDINATES: protein motif:HMM:TIGR00174.1
GO:0052381 - tRNA dimethylallyltransferase activity [Evidence IEA]
tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA
COORDINATES: protein motif:HMM:TIGR00585.2
GO:0016887 - ATP hydrolysis activity [Evidence IEA]
GO:0006298 - mismatch repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00254.1
COORDINATES: protein motif:HMM:NF012562.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245301.1
COORDINATES: protein motif:HMM:NF003842.0
endonuclease/exonuclease/phosphatase family protein
COORDINATES: protein motif:HMM:TIGR00048.1
COORDINATES: protein motif:HMM:TIGR00706.1
GO:0006465 - signal peptide processing [Evidence IEA]
COORDINATES: protein motif:HMM:NF037181.2
COORDINATES: protein motif:HMM:NF019844.2
COORDINATES: protein motif:HMM:NF013760.2
MotA/TolQ/ExbB proton channel family protein
COORDINATES: protein motif:HMM:NF014525.2
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013700.2
COORDINATES: protein motif:HMM:TIGR00225.1
COORDINATES: protein motif:HMM:TIGR00237.1
COORDINATES: protein motif:HMM:TIGR00573.1
COORDINATES: protein motif:HMM:NF024812.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245157.1
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245155.1
COORDINATES: protein motif:HMM:NF040322.1
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:TIGR01051.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF024484.2
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:TIGR02481.1
COORDINATES: protein motif:HMM:NF015237.2
GO:0022900 - electron transport chain [Evidence IEA]
cytochrome c nitrite reductase small subunit
COORDINATES: protein motif:HMM:NF014398.2
GO:0042597 - periplasmic space [Evidence IEA]
GO:0042279 - nitrite reductase (cytochrome, ammonia-forming) activity [Evidence IEA]
GO:0006807 - nitrogen compound metabolic process [Evidence IEA]
ammonia-forming cytochrome c nitrite reductase subunit c552
COORDINATES: protein motif:HMM:NF012402.2
COORDINATES: protein motif:HMM:NF015531.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: protein motif:HMM:NF016836.2
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: protein motif:HMM:NF016176.2
COORDINATES: protein motif:HMM:NF014684.2
branched-chain amino acid ABC transporter permease
branched-chain amino acid ABC transporter ATP-binding protein/permease
COORDINATES: similar to AA sequence:RefSeq:WP_013801934.1
COORDINATES: protein motif:HMM:NF015159.2
MetQ/NlpA family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF003559.0
GO:0008929 - methylglyoxal synthase activity [Evidence IEA]
GO:0019242 - methylglyoxal biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024864.2
COORDINATES: protein motif:HMM:NF013867.2
protein-glutamate O-methyltransferase CheR
COORDINATES: protein motif:HMM:NF015908.2
COORDINATES: protein motif:HMM:NF013731.2
GO:0006935 - chemotaxis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]
COORDINATES: protein motif:HMM:NF013327.2
COORDINATES: protein motif:HMM:NF023569.2
bifunctional alpha/beta hydrolase/class I SAM-dependent methyltransferase
COORDINATES: protein motif:HMM:NF015506.2
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: protein motif:HMM:NF014647.2
BMP family ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF012471.2
GO:0004181 - metallocarboxypeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013117.2
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF023374.2
COORDINATES: protein motif:HMM:NF012703.2
COORDINATES: protein motif:HMM:NF016300.2
The SIMPL domain is named for its presence in mouse protein SIMPL (signalling molecule that associates with mouse pelle-like kinase). Bacterial member BP26, from Brucella, was shown to assemble into a channel-like structure, while YggE from E. coli has been associated with resistance to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015131.2
COORDINATES: protein motif:HMM:NF013080.2
COORDINATES: protein motif:HMM:TIGR02096.1
GO:0004671 - protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity [Evidence IEA]
GO:0006481 - C-terminal protein methylation [Evidence IEA]
isoprenylcysteine carboxylmethyltransferase family protein
COORDINATES: protein motif:HMM:NF012421.2
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: protein motif:HMM:NF014587.2
COORDINATES: protein motif:HMM:TIGR01840.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243040.1
GO:0003978 - UDP-glucose 4-epimerase activity [Evidence IEA]
GO:0006012 - galactose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024832.2
COORDINATES: protein motif:HMM:NF024831.2
COORDINATES: protein motif:HMM:NF036823.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: protein motif:HMM:TIGR01733.1
amino acid adenylation domain-containing protein
COORDINATES: protein motif:HMM:NF003417.0
COORDINATES: protein motif:HMM:NF025007.2
COORDINATES: protein motif:HMM:NF014453.2
COORDINATES: protein motif:HMM:NF014324.2
GO:0004620 - phospholipase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018715.2
COORDINATES: protein motif:HMM:NF017353.2
COORDINATES: protein motif:HMM:NF013767.2
COORDINATES: protein motif:HMM:NF017077.2
hybrid sensor histidine kinase/response regulator
COORDINATES: similar to AA sequence:RefSeq:WP_005132658.1
COORDINATES: protein motif:HMM:NF015587.2
YihY/virulence factor BrkB family protein
COORDINATES: protein motif:HMM:NF023696.2
COORDINATES: protein motif:HMM:NF012869.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
ABC transporter transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF024257.2
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF015863.2
PepSY-associated TM helix domain-containing protein
COORDINATES: protein motif:HMM:NF014624.2
metal/formaldehyde-sensitive transcriptional repressor
COORDINATES: similar to AA sequence:RefSeq:WP_011911467.1
cation diffusion facilitator family transporter
COORDINATES: nucleotide motif:Rfam:14.4:RF01763
guanidine-III (ykkC-III) riboswitch; guanidine riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria; this is a third class of guanidine riboswitches based on ykkC-III RNA motif; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014243519.1
quaternary ammonium compound efflux SMR transporter SugE
COORDINATES: protein motif:HMM:TIGR04282.1
TIGR04282 family arsenosugar biosynthesis glycosyltransferase
COORDINATES: protein motif:HMM:TIGR04167.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
Some members of this family are selenoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.
arsenosugar biosynthesis radical SAM protein ArsS
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: protein motif:HMM:NF025114.2
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: protein motif:HMM:NF024376.2
phosphate/phosphite/phosphonate ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:TIGR01097.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]
GO:0015716 - organic phosphonate transport [Evidence IEA]
phosphonate ABC transporter, permease protein PhnE
COORDINATES: protein motif:HMM:NF012242.2
COORDINATES: protein motif:HMM:NF010052.0
COORDINATES: protein motif:HMM:NF015081.2
COORDINATES: protein motif:HMM:NF014114.2
COORDINATES: protein motif:HMM:NF014667.2
COORDINATES: protein motif:HMM:NF016221.2
COORDINATES: protein motif:HMM:TIGR01511.1
COORDINATES: similar to AA sequence:RefSeq:WP_004896675.1
GO:0015109 - chromate transmembrane transporter activity [Evidence IEA]
GO:0015703 - chromate transport [Evidence IEA]
histidine kinase N-terminal 7TM domain-containing protein
COORDINATES: protein motif:HMM:NF006821.0
COORDINATES: protein motif:HMM:TIGR00238.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01350.1
GO:0004148 - dihydrolipoyl dehydrogenase activity [Evidence IEA]
GO:0045454 - cell redox homeostasis [Evidence IEA]; GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02927.1
GO:0016746 - acyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
COORDINATES: protein motif:HMM:NF016146.2
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF023428.2
replication-associated recombination protein A
COORDINATES: protein motif:HMM:TIGR00030.1
COORDINATES: protein motif:HMM:NF013494.2
GO:0008124 - 4-alpha-hydroxytetrahydrobiopterin dehydratase activity [Evidence IEA]
GO:0006729 - tetrahydrobiopterin biosynthetic process [Evidence IEA]
4a-hydroxytetrahydrobiopterin dehydratase
COORDINATES: protein motif:HMM:NF012371.2
serine hydrolase domain-containing protein
COORDINATES: protein motif:HMM:NF028537.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
phosphoethanolamine--lipid A transferase
COORDINATES: protein motif:HMM:NF017319.2
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: protein motif:HMM:NF008877.0
GO:0004505 - phenylalanine 4-monooxygenase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00234.1
GO:0004831 - tyrosine-tRNA ligase activity [Evidence IEA]
GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF016056.2
DCC1-like thiol-disulfide oxidoreductase family protein
COORDINATES: protein motif:HMM:TIGR01297.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245019.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245050.1
YebC/PmpR family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014243629.1
COORDINATES: protein motif:HMM:NF013365.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0003899 - DNA-directed 5'-3' RNA polymerase activity [Evidence IEA]
DNA-directed RNA polymerase subunit omega
COORDINATES: protein motif:HMM:NF023559.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0140658 - ATP-dependent chromatin remodeler activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244666.1
COORDINATES: protein motif:HMM:NF013488.2
2-hydroxychromene-2-carboxylate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014245008.1
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245174.1
COORDINATES: protein motif:HMM:NF006824.0
GO:0003934 - GTP cyclohydrolase I activity [Evidence IEA]
GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019013.2
GO:0030638 - polyketide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008738.0
GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]
GO:0006468 - protein phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03331.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF002010.0
COORDINATES: protein motif:HMM:NF014691.2
class I SAM-dependent rRNA methyltransferase
COORDINATES: protein motif:HMM:NF012311.2
COORDINATES: protein motif:HMM:NF022426.2
Type 1 glutamine amidotransferase-like domain-containing protein
COORDINATES: protein motif:HMM:NF036911.2
protein-glutamine glutaminase family protein
COORDINATES: protein motif:HMM:NF018649.2
COORDINATES: protein motif:HMM:NF016211.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244995.1
GO:0003994 - aconitate hydratase activity [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
COORDINATES: protein motif:HMM:NF018028.2
COORDINATES: protein motif:HMM:TIGR01420.1
GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244976.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244975.1
COORDINATES: protein motif:HMM:NF012451.2
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF012874.2
COORDINATES: protein motif:HMM:NF013179.2
COORDINATES: protein motif:HMM:TIGR02135.1
GO:0051049 - regulation of transport [Evidence IEA]
phosphate signaling complex protein PhoU
COORDINATES: similar to AA sequence:RefSeq:WP_004810563.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: similar to AA sequence:RefSeq:WP_014244959.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02138.1
phosphate ABC transporter permease subunit PstC
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024878.2
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243686.1
GO:0046912 - acyltransferase activity, acyl groups converted into alkyl on transfer [Evidence IEA]
COORDINATES: protein motif:HMM:NF020804.2
small ribosomal subunit Rsm22 family protein
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase-like domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_003148783.1
COORDINATES: similar to AA sequence:RefSeq:WP_013616632.1
COORDINATES: protein motif:HMM:NF025598.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243701.1
COORDINATES: protein motif:HMM:NF025024.2
COORDINATES: protein motif:HMM:NF013232.2
COORDINATES: protein motif:HMM:TIGR01730.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF017568.2
thioredoxin-like domain-containing protein
COORDINATES: protein motif:HMM:NF021446.2
COORDINATES: protein motif:HMM:NF025703.2
COORDINATES: protein motif:HMM:NF024092.2
nuclear transport factor 2 family protein
COORDINATES: protein motif:HMM:NF021512.2
COORDINATES: protein motif:HMM:TIGR00027.1
COORDINATES: protein motif:HMM:NF020431.2
COORDINATES: protein motif:HMM:NF014825.2
GO:0046872 - metal ion binding [Evidence IEA]
SEC-C metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013502.2
COORDINATES: protein motif:HMM:NF017760.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243203.1
COORDINATES: protein motif:HMM:NF013089.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF014708.2
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245346.1
FMN-binding glutamate synthase family protein
COORDINATES: protein motif:HMM:NF001886.0
COORDINATES: protein motif:HMM:NF012318.2
COORDINATES: protein motif:HMM:NF024574.2
COORDINATES: protein motif:HMM:NF013161.2
COORDINATES: protein motif:HMM:NF016099.2
GO:0019290 - siderophore biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024913.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243224.1
COORDINATES: protein motif:HMM:NF012801.2
COORDINATES: protein motif:HMM:NF024242.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_013521170.1
COORDINATES: similar to AA sequence:RefSeq:WP_016205472.1
COORDINATES: protein motif:HMM:NF017536.2
COORDINATES: protein motif:HMM:NF017206.2
COORDINATES: protein motif:HMM:NF015438.2
COORDINATES: protein motif:HMM:NF017809.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0006281 - DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Ada metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF013827.2
rhomboid family intramembrane serine protease
COORDINATES: protein motif:HMM:NF015147.2
COORDINATES: protein motif:HMM:NF014763.2
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244017.1
COORDINATES: protein motif:HMM:NF028235.2
COORDINATES: similar to AA sequence:RefSeq:WP_017404329.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243156.1
COORDINATES: protein motif:HMM:TIGR03814.1
GO:0004359 - glutaminase activity [Evidence IEA]
GO:0006541 - glutamine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243566.1
COORDINATES: protein motif:HMM:NF016064.2
YeeE/YedE thiosulfate transporter family protein
COORDINATES: protein motif:HMM:NF008102.0
COORDINATES: protein motif:HMM:NF014200.2
GO:0004185 - serine-type carboxypeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: protein motif:HMM:NF003717.0
GO:0015935 - small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF013247.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244865.1
COORDINATES: protein motif:HMM:NF013851.2
COORDINATES: protein motif:HMM:NF024703.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016161.2
COORDINATES: protein motif:HMM:NF025033.2
COORDINATES: protein motif:HMM:NF002486.0
COORDINATES: similar to AA sequence:RefSeq:WP_014244837.1
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_000179874.1
GO:0045252 - oxoglutarate dehydrogenase complex [Evidence IEA]
GO:0004149 - dihydrolipoyllysine-residue succinyltransferase activity [Evidence IEA]
2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014243300.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244835.1
COORDINATES: protein motif:HMM:NF013866.2
COORDINATES: protein motif:HMM:NF018437.2
GO:0009254 - peptidoglycan turnover [Evidence IEA]
COORDINATES: protein motif:HMM:NF001808.0
GO:0016684 - oxidoreductase activity, acting on peroxide as acceptor [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:NF013434.2
COORDINATES: protein motif:HMM:NF014116.2
COORDINATES: protein motif:HMM:NF025054.2
COORDINATES: protein motif:HMM:NF014594.2
acetyl-CoA hydrolase/transferase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: protein motif:HMM:NF012529.2
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:TIGR03643.1
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF024802.2
glutathione S-transferase family protein
COORDINATES: protein motif:HMM:NF024784.2
HNH endonuclease signature motif containing protein
COORDINATES: protein motif:HMM:NF024734.2
type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein
type II toxin-antitoxin system Phd/YefM family antitoxin
COORDINATES: protein motif:HMM:TIGR02607.1
ParB/Srx family N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016724.2
COORDINATES: protein motif:HMM:NF024420.2
COORDINATES: protein motif:HMM:NF021427.2
COORDINATES: protein motif:HMM:NF024977.2
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025186.2
COORDINATES: protein motif:HMM:NF024139.2
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01957.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:TIGR01962.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013426.2
NAD(P)H-dependent oxidoreductase subunit E
COORDINATES: protein motif:HMM:TIGR01959.1
NADH-quinone oxidoreductase subunit NuoF
COORDINATES: protein motif:HMM:NF024900.2
COORDINATES: protein motif:HMM:TIGR01971.1
COORDINATES: protein motif:HMM:TIGR00667.1
GO:0008914 - leucyltransferase activity [Evidence IEA]
leucyl/phenylalanyl-tRNA--protein transferase
COORDINATES: similar to AA sequence:RefSeq:WP_014244825.1
COORDINATES: protein motif:HMM:NF014841.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244822.1
COORDINATES: protein motif:HMM:NF016230.2
COORDINATES: protein motif:HMM:TIGR00945.1
GO:0015628 - protein secretion by the type II secretion system [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244815.1
GO:0008712 - ADP-glyceromanno-heptose 6-epimerase activity [Evidence IEA]
GO:0009244 - lipopolysaccharide core region biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013838.2
FliG C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013427.2
GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003555.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243936.1
COORDINATES: protein motif:HMM:TIGR03081.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243949.1
GO:0000286 - alanine dehydrogenase activity [Evidence IEA]
GO:0006522 - alanine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF024515.2
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF012879.2
COORDINATES: protein motif:HMM:NF016408.2
COORDINATES: protein motif:HMM:TIGR00552.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243971.1
COORDINATES: similar to AA sequence:RefSeq:WP_011676756.1
amino acid ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF003967.1
COORDINATES: protein motif:HMM:NF013517.2
GO:0019646 - aerobic electron transport chain [Evidence IEA]
COORDINATES: protein motif:HMM:NF015875.2
tRNA-uridine aminocarboxypropyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014243981.1
COORDINATES: protein motif:HMM:NF024732.2
COORDINATES: protein motif:HMM:TIGR00797.1
COORDINATES: protein motif:HMM:NF015406.2
COORDINATES: protein motif:HMM:TIGR01777.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243410.1
COORDINATES: protein motif:HMM:NF022439.2
COORDINATES: protein motif:HMM:NF023164.2
COORDINATES: protein motif:HMM:NF013629.2
COORDINATES: protein motif:HMM:NF018352.2
COORDINATES: protein motif:HMM:TIGR01056.1
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF033768.1
AgmX/PglI C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR04565.1
outer membrane beta-barrel domain-containing protein
COORDINATES: protein motif:HMM:NF000658.1
COORDINATES: protein motif:HMM:NF024773.2
COORDINATES: protein motif:HMM:NF039677.1
COORDINATES: similar to AA sequence:RefSeq:WP_000667286.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244646.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244645.1
COORDINATES: protein motif:HMM:NF013381.2
GO:0004853 - uroporphyrinogen decarboxylase activity [Evidence IEA]
uroporphyrinogen decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244631.1
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:TIGR00212.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF017051.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244624.1
COORDINATES: protein motif:HMM:NF039580.1
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: protein motif:HMM:TIGR00168.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244620.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244619.1
COORDINATES: protein motif:HMM:NF012630.2
GO:0031012 - extracellular matrix [Evidence IEA]
GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244610.1
GO:0016832 - aldehyde-lyase activity [Evidence IEA]
GO:0015074 - DNA integration [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02191.1
GO:0004525 - ribonuclease III activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF000908.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012570.2
COORDINATES: protein motif:HMM:NF024753.2
PQQ-binding-like beta-propeller repeat protein
COORDINATES: protein motif:HMM:NF014027.2
GO:0008612 - peptidyl-lysine modification to peptidyl-hypusine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244718.1
GO:0008792 - arginine decarboxylase activity [Evidence IEA]
GO:0006527 - arginine catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015094.2
COORDINATES: protein motif:HMM:NF015048.2
COORDINATES: protein motif:HMM:NF013143.2
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF013465.2
zinc ABC transporter substrate-binding protein
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0017150 - tRNA dihydrouridine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024811.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244739.1
GO:0048501 - signal recognition particle, plasma membrane targeting [Evidence IEA]
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005048 - signal sequence binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00002.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244731.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244728.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014244727.1
GO:0033739 - preQ1 synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00109.1
GO:0004325 - ferrochelatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024093.2
COORDINATES: similar to AA sequence:RefSeq:WP_015962150.1
GO:0008199 - ferric iron binding [Evidence IEA]; GO:0004322 - ferroxidase activity [Evidence IEA]
GO:0006880 - intracellular sequestering of iron ion [Evidence IEA]
COORDINATES: protein motif:HMM:NF020032.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00159.1
GO:0004016 - adenylate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019561.2
COORDINATES: protein motif:HMM:NF008139.0
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF003625.0
COORDINATES: protein motif:HMM:NF014426.2
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE
COORDINATES: protein motif:HMM:TIGR00738.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245049.1
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: protein motif:HMM:TIGR01695.1
GO:0034204 - lipid translocation [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
murein biosynthesis integral membrane protein MurJ
COORDINATES: protein motif:HMM:NF012894.2
COORDINATES: protein motif:HMM:TIGR03818.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244681.1
COORDINATES: protein motif:HMM:NF013871.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244671.1
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF016995.2
COORDINATES: protein motif:HMM:NF019403.2
heparan-alpha-glucosaminide N-acetyltransferase
COORDINATES: protein motif:HMM:NF013927.2
bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase
COORDINATES: protein motif:HMM:NF026098.2
pyrroline-5-carboxylate reductase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244649.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244063.1
GO:0051540 - metal cluster binding [Evidence IEA]
Nif3-like dinuclear metal center hexameric protein
COORDINATES: protein motif:HMM:NF024579.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244069.1
COORDINATES: protein motif:HMM:NF025217.2
COORDINATES: protein motif:HMM:NF014564.2
GO:0008410 - CoA-transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015168.2
COORDINATES: protein motif:HMM:NF014300.2
GO:0004127 - cytidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244500.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00472.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:TIGR02273.1
Essential for efficient processing of 16S rRNA; Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00088.1
GO:0052906 - tRNA (guanine(37)-N(1))-methyltransferase activity [Evidence IEA]
tRNA (guanosine(37)-N1)-methyltransferase TrmD
COORDINATES: similar to AA sequence:RefSeq:WP_014244495.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244494.1
COORDINATES: protein motif:HMM:NF013514.2
COORDINATES: protein motif:HMM:TIGR00377.1
COORDINATES: protein motif:HMM:TIGR00096.1
GO:0008649 - rRNA methyltransferase activity [Evidence IEA]; GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
GO:0000451 - rRNA 2'-O-methylation [Evidence IEA]
16S rRNA (cytidine(1402)-2'-O)-methyltransferase
3',5'-cyclic-nucleotide phosphodiesterase
COORDINATES: protein motif:HMM:NF012345.2
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF001490.0
GO:0008252 - nucleotidase activity [Evidence IEA]
peptidoglycan DD-metalloendopeptidase family protein
COORDINATES: protein motif:HMM:NF013122.2
GO:0004527 - exonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244473.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244472.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF040521.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244468.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008716 - D-alanine-D-alanine ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244467.1
GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]
GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012698.2
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF014617.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244462.1
COORDINATES: protein motif:HMM:TIGR00487.1
COORDINATES: protein motif:HMM:TIGR00082.1
GO:0019843 - rRNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013660.2
COORDINATES: protein motif:HMM:NF024763.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244454.1
COORDINATES: protein motif:HMM:NF013411.2
6-pyruvoyl tetrahydropterin synthase family protein
COORDINATES: protein motif:HMM:NF012304.2
COORDINATES: protein motif:HMM:TIGR01533.1
5'-nucleotidase, lipoprotein e(P4) family
COORDINATES: protein motif:HMM:NF013509.2
FKBP-type peptidyl-prolyl cis-trans isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014244447.1
COORDINATES: protein motif:HMM:NF012241.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244261.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245168.1
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00067.1
GO:0008881 - glutamate racemase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244268.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF002677.0
GO:0003684 - damaged DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00498.1
GO:0006282 - regulation of DNA repair [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF013188.2
GO:0051139 - metal cation:proton antiporter activity [Evidence IEA]
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:1902600 - proton transmembrane transport [Evidence IEA]
monovalent cation:proton antiporter-2 (CPA2) family protein
COORDINATES: protein motif:HMM:NF024922.2
alpha-ketoglutarate-dependent dioxygenase AlkB
COORDINATES: protein motif:HMM:NF020932.2
COORDINATES: protein motif:HMM:NF018269.2
COORDINATES: protein motif:HMM:NF005308.0
(2Fe-2S) ferredoxin domain-containing protein
nicotinate-nucleotide adenylyltransferase
COORDINATES: protein motif:HMM:NF014336.2
COORDINATES: protein motif:HMM:NF025224.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244178.1
GO:0004068 - aspartate 1-decarboxylase activity [Evidence IEA]
GO:0006523 - alanine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00338.1
GO:0036424 - L-phosphoserine phosphatase activity [Evidence IEA]
GO:0006564 - L-serine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00560.1
GO:0008444 - CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
COORDINATES: protein motif:HMM:NF018894.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244182.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF015331.2
COORDINATES: protein motif:HMM:TIGR00044.1
YggS family pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_014244186.1
2-oxoglutarate and iron-dependent oxygenase domain-containing protein
COORDINATES: protein motif:HMM:NF037016.2
COORDINATES: protein motif:HMM:NF037120.2
COORDINATES: protein motif:HMM:NF013955.2
COORDINATES: protein motif:HMM:NF016245.2
fibronectin type III domain-containing protein
COORDINATES: protein motif:HMM:TIGR00113.1
GO:0016853 - isomerase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA
COORDINATES: similar to AA sequence:RefSeq:WP_014244204.1
GO:0008479 - queuine tRNA-ribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244205.1
COORDINATES: protein motif:HMM:NF014470.2
COORDINATES: protein motif:HMM:TIGR01129.1
GO:0031522 - cell envelope Sec protein transport complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00966.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244211.1
COORDINATES: protein motif:HMM:NF022018.2
COORDINATES: protein motif:HMM:NF018813.2
COORDINATES: protein motif:HMM:TIGR00710.1
COORDINATES: protein motif:HMM:TIGR00914.1
CusA/CzcA family heavy metal efflux RND transporter
COORDINATES: protein motif:HMM:NF025683.2
COORDINATES: protein motif:HMM:NF016915.2
COORDINATES: protein motif:HMM:NF024255.2
GO:0016429 - tRNA (adenine-N1-)-methyltransferase activity [Evidence IEA]
tRNA (adenine(22)-N(1))-methyltransferase TrmK
COORDINATES: protein motif:HMM:NF025871.2
iron-containing redox enzyme family protein
COORDINATES: protein motif:HMM:NF013304.2
COORDINATES: protein motif:HMM:TIGR00068.2
GO:0004462 - lactoylglutathione lyase activity [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0051596 - methylglyoxal catabolic process [Evidence IEA]
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014244716.1
COORDINATES: protein motif:HMM:NF015055.2
GO:0005509 - calcium ion binding [Evidence IEA]; GO:0004668 - protein-arginine deiminase activity [Evidence IEA]
protein-arginine deiminase family protein
COORDINATES: protein motif:HMM:NF025637.2
COORDINATES: protein motif:HMM:NF017949.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244247.1
GO:0003924 - GTPase activity [Evidence IEA]
bifunctional UDP-sugar hydrolase/5'-nucleotidase
COORDINATES: similar to AA sequence:RefSeq:WP_014244444.1
GO:0004375 - glycine dehydrogenase (decarboxylating) activity [Evidence IEA]
GO:0006546 - glycine catabolic process [Evidence IEA]
aminomethyl-transferring glycine dehydrogenase subunit GcvPB
COORDINATES: protein motif:HMM:NF016340.2
GO:0008990 - rRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013422.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244438.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244437.1
GO:0004816 - asparagine-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006421 - asparaginyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF041131.1
regulatory iron-sulfur-containing complex subunit RicT
COORDINATES: protein motif:HMM:NF024575.2
COORDINATES: protein motif:HMM:TIGR00041.1
GO:0004798 - thymidylate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016311.2
glycosyltransferase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244425.1
COORDINATES: protein motif:HMM:NF012596.2
GO:0070403 - NAD+ binding [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020928.2
COORDINATES: protein motif:HMM:NF012280.2
COORDINATES: protein motif:HMM:TIGR02432.1
GO:0016879 - ligase activity, forming carbon-nitrogen bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244385.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]
GO:0051301 - cell division [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013007.2
COORDINATES: protein motif:HMM:NF004881.0
COORDINATES: protein motif:HMM:NF012760.2
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039905.1
GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF019605.2
COORDINATES: protein motif:HMM:NF023327.2
COORDINATES: protein motif:HMM:NF013077.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244310.1
GO:0005971 - ribonucleoside-diphosphate reductase complex [Evidence IEA]
GO:0004748 - ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleoside-diphosphate reductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_014244311.1
GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA]
ribonucleotide-diphosphate reductase subunit beta
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244354.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014244353.1
GO:0008840 - 4-hydroxy-tetrahydrodipicolinate synthase activity [Evidence IEA]
4-hydroxy-tetrahydrodipicolinate synthase
COORDINATES: protein motif:HMM:NF017024.2
GO:0008839 - 4-hydroxy-tetrahydrodipicolinate reductase [Evidence IEA]
dihydrodipicolinate reductase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244351.1
GO:0004072 - aspartate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244350.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00506.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:NF017945.2
COORDINATES: protein motif:HMM:NF017266.2
GO:0016645 - oxidoreductase activity, acting on the CH-NH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244330.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244327.1
GO:0004222 - metalloendopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244320.1
COORDINATES: protein motif:HMM:TIGR00530.1
1-acylglycerol-3-phosphate O-acyltransferase
COORDINATES: protein motif:HMM:TIGR00093.1
GO:0001522 - pseudouridine synthesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013316.2
COORDINATES: protein motif:HMM:NF015944.2
COORDINATES: protein motif:HMM:NF016424.2
COORDINATES: protein motif:HMM:NF012413.2
COORDINATES: similar to AA sequence:RefSeq:WP_005123418.1
GO:0004799 - thymidylate synthase activity [Evidence IEA]
GO:0006231 - dTMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244302.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244301.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244300.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244299.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244298.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244297.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244291.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: protein motif:HMM:NF001244.0
GO:0052624 - 2-phytyl-1,4-naphthoquinone methyltransferase activity [Evidence IEA]
GO:0042372 - phylloquinone biosynthetic process [Evidence IEA]
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE
COORDINATES: protein motif:HMM:TIGR00543.1
GO:0008909 - isochorismate synthase activity [Evidence IEA]
GO:0009234 - menaquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00173.1
GO:0070204 - 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase activity [Evidence IEA]
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase
COORDINATES: protein motif:HMM:TIGR00751.1
GO:0046428 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity [Evidence IEA]
1,4-dihydroxy-2-naphthoate polyprenyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014244166.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244165.1
COORDINATES: protein motif:HMM:NF006949.0
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040769.1
COORDINATES: protein motif:HMM:NF023354.2
COORDINATES: protein motif:HMM:NF025059.2
COORDINATES: protein motif:HMM:TIGR00500.1
COORDINATES: protein motif:HMM:NF012774.2
COORDINATES: protein motif:HMM:NF017591.2
COORDINATES: protein motif:HMM:TIGR00401.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244512.1
GO:0016783 - sulfurtransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015042.2
COORDINATES: protein motif:HMM:NF012372.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244521.1
GO:0017118 - lipoyltransferase activity [Evidence IEA]
biosynthetic peptidoglycan transglycosylase
COORDINATES: protein motif:HMM:TIGR01656.1
COORDINATES: protein motif:HMM:NF012412.2
COORDINATES: protein motif:HMM:NF009455.0
carbamoyl-phosphate synthase large subunit
COORDINATES: protein motif:HMM:NF001273.0
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]; GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244538.1
COORDINATES: protein motif:HMM:NF014373.2
COORDINATES: protein motif:HMM:NF025631.2
COORDINATES: protein motif:HMM:NF017534.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244555.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244556.1
GO:0015416 - ABC-type phosphonate transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
phosphonate ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244947.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244948.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244949.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244950.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244951.1
COORDINATES: protein motif:HMM:NF021466.2
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: protein motif:HMM:NF021188.2
polyhydroxyalkanoic acid system family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244149.1
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF008805.1
GO:0004654 - polyribonucleotide nucleotidyltransferase activity [Evidence IEA]
polyribonucleotide nucleotidyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019958878.1
COORDINATES: protein motif:HMM:NF005143.0
COORDINATES: similar to AA sequence:RefSeq:WP_014244142.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244141.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244140.1
COORDINATES: protein motif:HMM:NF033484.1
GO:0004722 - protein serine/threonine phosphatase activity [Evidence IEA]
GO:0006470 - protein dephosphorylation [Evidence IEA]
Stp1/IreP family PP2C-type Ser/Thr phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014244132.1
GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0017038 - protein import [Evidence IEA]; GO:0006605 - protein targeting [Evidence IEA]
glycerol-3-phosphate dehydrogenase/oxidase
COORDINATES: similar to AA sequence:RefSeq:WP_011347508.1
GO:0004791 - thioredoxin-disulfide reductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244121.1
COORDINATES: protein motif:HMM:NF037336.2
COORDINATES: protein motif:HMM:NF040656.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244118.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0016054 - organic acid catabolic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase, degradative
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: protein motif:HMM:NF012799.2
COORDINATES: protein motif:HMM:NF014542.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244108.1
GO:0016615 - malate dehydrogenase activity [Evidence IEA]
GO:0006108 - malate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00195.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244090.1
beta-ketoacyl-[acyl-carrier-protein] synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244089.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244087.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244086.1
COORDINATES: protein motif:HMM:NF006754.0
GO:0031956 - medium-chain fatty acid-CoA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244080.1
COORDINATES: protein motif:HMM:NF000582.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244078.1
COORDINATES: protein motif:HMM:NF018037.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244077.1
COORDINATES: protein motif:HMM:NF015451.2
COORDINATES: protein motif:HMM:TIGR00200.1
CinA family nicotinamide mononucleotide deamidase-related protein
COORDINATES: protein motif:HMM:NF001390.0
GO:0050380 - undecaprenyl-diphosphatase activity [Evidence IEA]
GO:0016311 - dephosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025833.2
COORDINATES: protein motif:HMM:NF002937.0
GO:0030729 - acetoacetate-CoA ligase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]
COORDINATES: protein motif:HMM:NF017494.2
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
COORDINATES: protein motif:HMM:NF017493.2
COORDINATES: protein motif:HMM:NF024754.2
COORDINATES: protein motif:HMM:NF012696.2
GO:0004089 - carbonate dehydratase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF018045.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244584.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244585.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244586.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244587.1
carboxyl transferase domain-containing protein
COORDINATES: protein motif:HMM:NF014661.2
COORDINATES: protein motif:HMM:NF001208.0
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244590.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243435.1
COORDINATES: protein motif:HMM:TIGR02118.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244592.1
COORDINATES: protein motif:HMM:NF016993.2
GO:0010124 - phenylacetate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014757.2
COORDINATES: protein motif:HMM:NF012928.2
GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]
3-hydroxyacyl-CoA dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014244595.1
COORDINATES: protein motif:HMM:NF025850.2
COORDINATES: protein motif:HMM:NF024874.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244751.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244754.1
COORDINATES: protein motif:HMM:NF019045.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244766.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01048.1
GO:0008836 - diaminopimelate decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015558.2
putative sulfate exporter family transporter
COORDINATES: protein motif:HMM:TIGR00435.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014602.2
COORDINATES: protein motif:HMM:NF024845.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244769.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244770.1
COORDINATES: similar to AA sequence:RefSeq:WP_018985876.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: protein motif:HMM:NF023312.2
COORDINATES: protein motif:HMM:TIGR00768.1
30S ribosomal protein S6--L-glutamate ligase
COORDINATES: protein motif:HMM:NF017434.2
COORDINATES: protein motif:HMM:TIGR02046.1
succinate dehydrogenase cytochrome b subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014244779.1
fumarate reductase/succinate dehydrogenase flavoprotein subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014243175.1
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:NF013491.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
PEP/pyruvate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF021759.2
COORDINATES: protein motif:HMM:NF014477.2
GO:0017013 - protein flavinylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF023516.2
COORDINATES: protein motif:HMM:NF025452.2
GO:0008234 - cysteine-type peptidase activity [Evidence IEA]
TraR/DksA family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014244798.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245259.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243992.1
COORDINATES: protein motif:HMM:NF013835.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244802.1
COORDINATES: protein motif:HMM:NF024946.2
COORDINATES: protein motif:HMM:TIGR01087.1
GO:0008764 - UDP-N-acetylmuramoylalanine-D-glutamate ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
COORDINATES: protein motif:HMM:NF023853.2
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF036516.2
COORDINATES: protein motif:HMM:NF024907.2
COORDINATES: protein motif:HMM:NF024578.2
COORDINATES: protein motif:HMM:TIGR02517.1
GO:0015627 - type II protein secretion system complex [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02533.1
COORDINATES: protein motif:HMM:TIGR02120.1
type II secretion system inner membrane protein GspF
COORDINATES: protein motif:HMM:TIGR01710.1
type II secretion system major pseudopilin GspG
COORDINATES: protein motif:HMM:NF019575.2
prepilin-type N-terminal cleavage/methylation domain-containing protein
COORDINATES: protein motif:HMM:NF022554.2
COORDINATES: similar to AA sequence:RefSeq:WP_006708235.1
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF012731.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012430.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243902.1
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243901.1
COORDINATES: protein motif:HMM:TIGR01981.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243899.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243898.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243896.1
COORDINATES: protein motif:HMM:NF003727.1
GO:0004109 - coproporphyrinogen oxidase activity [Evidence IEA]
oxygen-dependent coproporphyrinogen oxidase
adenylate/guanylate cyclase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245170.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016992 - lipoate synthase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0009107 - lipoate biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243884.1
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
alpha-ketoacid dehydrogenase subunit alpha/beta
COORDINATES: similar to AA sequence:RefSeq:WP_014243883.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0005975 - carbohydrate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF025892.2
YiiD C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014243873.1
GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022430.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243870.1
pyridoxal phosphate-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF027681.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243866.1
COORDINATES: protein motif:HMM:NF002634.0
GO:0003999 - adenine phosphoribosyltransferase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0009116 - nucleoside metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017245584.1
organic hydroperoxide resistance protein
COORDINATES: protein motif:HMM:NF018389.2
COORDINATES: protein motif:HMM:NF014633.2
COORDINATES: protein motif:HMM:NF037276.2
COORDINATES: protein motif:HMM:TIGR00014.1
GO:0008794 - arsenate reductase (glutaredoxin) activity [Evidence IEA]
This arsenate reductase requires both glutathione and glutaredoxin to convert arsenate to arsenite, after which the efflux transporter formed by ArsA and ArsB can extrude the arsenite from the cell, providing resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF019301.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244254.1
GO:0046872 - metal ion binding [Evidence IEA]; GO:0004784 - superoxide dismutase activity [Evidence IEA]
GO:0006801 - superoxide metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023984.2
COORDINATES: protein motif:HMM:NF028441.2
outer membrane lipoprotein-sorting protein
COORDINATES: protein motif:HMM:TIGR00276.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0052693 - epoxyqueuosine reductase activity [Evidence IEA]
GO:0008616 - queuosine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF004978.0
GO:0004743 - pyruvate kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001965.0
chemotaxis response regulator protein-glutamate methylesterase
COORDINATES: protein motif:HMM:NF009897.0
GO:0004084 - branched-chain-amino-acid transaminase activity [Evidence IEA]
GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA]
branched-chain amino acid aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014245076.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245077.1
COORDINATES: protein motif:HMM:NF014877.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245079.1
COORDINATES: protein motif:HMM:TIGR01036.1
GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006222 - UMP biosynthetic process [Evidence IEA]
quinone-dependent dihydroorotate dehydrogenase
COORDINATES: protein motif:HMM:NF005298.0
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245086.1
COORDINATES: protein motif:HMM:NF018620.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245088.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003922 - GMP synthase (glutamine-hydrolyzing) activity [Evidence IEA]; GO:0016462 - pyrophosphatase activity [Evidence IEA]
GO:0006177 - GMP biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_016291787.1
GO:0003938 - IMP dehydrogenase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: similar to AA sequence:RefSeq:WP_017953470.1
ADP-ribosylglycohydrolase family protein
COORDINATES: protein motif:HMM:NF000942.0
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF016262.2
COORDINATES: protein motif:HMM:TIGR01670.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245099.1
GO:0008676 - 3-deoxy-8-phosphooctulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245100.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00466.1
GO:0008690 - 3-deoxy-manno-octulosonate cytidylyltransferase activity [Evidence IEA]
3-deoxy-manno-octulosonate cytidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014245105.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00878.1
GO:0004641 - phosphoribosylformylglycinamidine cyclo-ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF002049.0
GO:0003824 - catalytic activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
COORDINATES: protein motif:HMM:NF024897.2
phosphoribosylformylglycinamidine synthase subunit PurQ
COORDINATES: protein motif:HMM:NF014788.2
COORDINATES: protein motif:HMM:TIGR00639.1
GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
phosphoribosylglycinamide formyltransferase
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013428.2
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:TIGR01134.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004679.0
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide synthase
COORDINATES: similar to AA sequence:RefSeq:WP_003021871.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:NF040177.1
COORDINATES: protein motif:HMM:NF021896.2
disulfide isomerase DsbC N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02532.1
COORDINATES: protein motif:HMM:NF016895.2
COORDINATES: protein motif:HMM:NF012485.2
pilus assembly protein N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR00657.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245116.1
GO:0045900 - negative regulation of translational elongation [Evidence IEA]
energy-dependent translational throttle protein EttA
COORDINATES: protein motif:HMM:NF016535.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245124.1
GO:0051287 - NAD binding [Evidence IEA]; GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012549.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245126.1
COORDINATES: protein motif:HMM:TIGR02070.1
GO:0016020 - membrane [Evidence IEA]; GO:0009274 - peptidoglycan-based cell wall [Evidence IEA]
monofunctional biosynthetic peptidoglycan transglycosylase
COORDINATES: protein motif:HMM:NF012739.2
COORDINATES: protein motif:HMM:TIGR00711.1
GO:0009410 - response to xenobiotic stimulus [Evidence IEA]; GO:0006855 - xenobiotic transmembrane transport [Evidence IEA]
DHA2 family efflux MFS transporter permease subunit
COORDINATES: protein motif:HMM:NF024829.2
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: protein motif:HMM:TIGR02464.1
phospholipase D-like domain-containing protein
COORDINATES: protein motif:HMM:NF018866.2
COORDINATES: protein motif:HMM:NF021616.2
COORDINATES: protein motif:HMM:NF015686.2
COORDINATES: protein motif:HMM:TIGR03916.1
putative DNA modification/repair radical SAM protein
COORDINATES: protein motif:HMM:TIGR03915.1
This protein belongs to the uracil DNA glycosylase superfamily, members of which act in excision repair of DNA. However, it belongs more specifically to UdgX branch, whose founding member was found to bind uracil in DNA (where it does not belong), without cleaving it, appears to promote DNA repair by a pathway involving RecA, rather than base excision; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014244159.1
GO:0016668 - oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor [Evidence IEA]
GO:0009398 - FMN biosynthetic process [Evidence IEA]; GO:0006805 - xenobiotic metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003858764.1
GO:0102039 - NADH-dependent peroxiredoxin activity [Evidence IEA]
GO:0006979 - response to oxidative stress [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00196.1
GO:0052855 - ADP-dependent NAD(P)H-hydrate dehydratase activity [Evidence IEA]
Crp/Fnr family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR01512.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244049.1
GO:0008535 - respiratory chain complex IV assembly [Evidence IEA]
cbb3-type cytochrome oxidase assembly protein CcoS
COORDINATES: similar to AA sequence:RefSeq:WP_014244048.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]
cytochrome-c oxidase, cbb3-type subunit I
COORDINATES: protein motif:HMM:NF017366.2
cbb3-type cytochrome c oxidase subunit 3
cbb3-type cytochrome c oxidase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02745.1
cytochrome c oxidase accessory protein CcoG
COORDINATES: protein motif:HMM:NF024778.2
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: protein motif:HMM:TIGR00538.1
oxygen-independent coproporphyrinogen III oxidase
COORDINATES: protein motif:HMM:NF037749.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243846.1
GO:0018738 - S-formylglutathione hydrolase activity [Evidence IEA]
GO:0046292 - formaldehyde metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003984083.1
GO:0004024 - alcohol dehydrogenase activity, zinc-dependent [Evidence IEA]; GO:0051903 - S-(hydroxymethyl)glutathione dehydrogenase activity [Evidence IEA]
GO:0006113 - fermentation [Evidence IEA]; GO:0009404 - toxin metabolic process [Evidence IEA]
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_014243826.1
COORDINATES: protein motif:HMM:NF012436.2
DNA starvation/stationary phase protection protein
COORDINATES: protein motif:HMM:NF020892.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF015786.2
COORDINATES: protein motif:HMM:NF015376.2
penicillin-insensitive murein endopeptidase
COORDINATES: protein motif:HMM:NF024317.2
COORDINATES: protein motif:HMM:NF014414.2
cyclopropane-fatty-acyl-phospholipid synthase family protein
COORDINATES: protein motif:HMM:NF018770.2
COORDINATES: protein motif:HMM:NF019819.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243831.1
OsmC domain/YcaO domain-containing protein
COORDINATES: protein motif:HMM:NF025262.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243530.1
zinc ribbon domain-containing protein YjdM
COORDINATES: protein motif:HMM:NF037605.2
COORDINATES: protein motif:HMM:NF012305.2
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF025088.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243167.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245738.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245739.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245740.1
COORDINATES: protein motif:HMM:NF012621.2
heavy metal-associated domain-containing protein
COORDINATES: protein motif:HMM:NF014465.2
mercuric transporter MerT family protein
COORDINATES: protein motif:HMM:NF037241.2
COORDINATES: similar to AA sequence:RefSeq:WP_003090238.1
COORDINATES: similar to AA sequence:RefSeq:WP_016451564.1
COORDINATES: protein motif:HMM:NF019352.2
metal-sensitive transcriptional regulator
COORDINATES: protein motif:HMM:NF019262.2
c-type cytochrome domain-containing protein
COORDINATES: protein motif:HMM:TIGR04325.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_004440702.1
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: protein motif:HMM:NF039593.1
heavy metal-binding domain-containing protein
COORDINATES: protein motif:HMM:NF022853.2
protein-disulfide reductase DsbD family protein
COORDINATES: protein motif:HMM:NF013421.2
COORDINATES: protein motif:HMM:NF013695.2
COORDINATES: protein motif:HMM:NF033788.1
metalloregulator ArsR/SmtB family transcription factor
COORDINATES: protein motif:HMM:NF015213.2
GO:0033573 - high-affinity iron permease complex [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO:0005381 - iron ion transmembrane transporter activity [Evidence IEA]
GO:0034755 - iron ion transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF012455.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245057.1
COORDINATES: similar to AA sequence:RefSeq:WP_011829938.1
COORDINATES: protein motif:HMM:NF040179.1
COORDINATES: protein motif:HMM:NF015688.2
COORDINATES: protein motif:HMM:NF024254.2
type IV secretion system DNA-binding domain-containing protein
COORDINATES: protein motif:HMM:NF012651.2
COORDINATES: protein motif:HMM:NF013328.2
DNA-formamidopyrimidine glycosylase family protein
COORDINATES: protein motif:HMM:NF003819.0
YajQ family cyclic di-GMP-binding protein
COORDINATES: protein motif:HMM:NF013755.2
COORDINATES: protein motif:HMM:TIGR00464.1
GO:0009332 - glutamate-tRNA ligase complex [Evidence IEA]
GO:0004818 - glutamate-tRNA ligase activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243778.1
COORDINATES: protein motif:HMM:NF015709.2
COORDINATES: protein motif:HMM:NF007702.0
GO:0004362 - glutathione-disulfide reductase (NADPH) activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013401.2
COORDINATES: protein motif:HMM:NF004231.0
GO:0010181 - FMN binding [Evidence IEA]; GO:0004733 - pyridoxamine-phosphate oxidase activity [Evidence IEA]
GO:0008615 - pyridoxine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00479.1
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
COORDINATES: protein motif:HMM:NF014816.2
COORDINATES: protein motif:HMM:NF019626.2
flavohemoglobin expression-modulating QEGLA motif protein
COORDINATES: protein motif:HMM:NF022537.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244894.1
GO:0008935 - 1,4-dihydroxy-2-naphthoyl-CoA synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243759.1
COORDINATES: protein motif:HMM:NF013213.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF015380.2
COORDINATES: protein motif:HMM:NF015020.2
COORDINATES: protein motif:HMM:TIGR00290.1
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF039524.1
DUF883 C-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR03904.1
GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF006718.0
alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB
COORDINATES: protein motif:HMM:TIGR04344.1
COORDINATES: protein motif:HMM:NF019607.2
COORDINATES: protein motif:HMM:NF020296.2
COORDINATES: protein motif:HMM:TIGR00400.1
GO:0015095 - magnesium ion transmembrane transporter activity [Evidence IEA]
GO:0015693 - magnesium ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF013624.2
COORDINATES: protein motif:HMM:NF013575.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243654.1
COORDINATES: protein motif:HMM:NF014335.2
COORDINATES: protein motif:HMM:NF008653.0
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF008231.0
COORDINATES: protein motif:HMM:NF011080.0
GO:0004134 - 4-alpha-glucanotransferase activity [Evidence IEA]
GO:0005980 - glycogen catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02094.1
COORDINATES: protein motif:HMM:NF012356.2
COORDINATES: protein motif:HMM:NF014919.2
COORDINATES: protein motif:HMM:NF007011.0
GO:0015144 - carbohydrate transmembrane transporter activity [Evidence IEA]
GO:0008643 - carbohydrate transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
maltose/maltodextrin ABC transporter substrate-binding protein MalE
COORDINATES: protein motif:HMM:NF012692.2
COORDINATES: similar to AA sequence:RefSeq:WP_013352894.1
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243137.1
COORDINATES: protein motif:HMM:NF017755.2
GO:0008988 - rRNA (adenine-N6-)-methyltransferase activity [Evidence IEA]
23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
COORDINATES: protein motif:HMM:NF016260.2
translocation/assembly module TamB domain-containing protein
COORDINATES: protein motif:HMM:NF013283.2
COORDINATES: protein motif:HMM:NF017819.2
COORDINATES: protein motif:HMM:TIGR03558.1
LLM class flavin-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF017970.2
COORDINATES: protein motif:HMM:NF015551.2
GO:0042925 - benzoate transmembrane transporter activity [Evidence IEA]
GO:0042919 - benzoate transport [Evidence IEA]
benzoate/H(+) symporter BenE family transporter
COORDINATES: protein motif:HMM:NF020909.2
COORDINATES: protein motif:HMM:TIGR01389.1
COORDINATES: protein motif:HMM:NF024251.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244173.1
COORDINATES: protein motif:HMM:TIGR02967.1
GO:0008892 - guanine deaminase activity [Evidence IEA]
GO:0006147 - guanine catabolic process [Evidence IEA]
GO:0016829 - lyase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015338.2
COORDINATES: protein motif:HMM:NF016705.2
COORDINATES: protein motif:HMM:NF013705.2
COORDINATES: protein motif:HMM:NF024979.2
COORDINATES: protein motif:HMM:NF017946.2
COORDINATES: protein motif:HMM:NF023159.2
helix-hairpin-helix domain-containing protein
COORDINATES: protein motif:HMM:TIGR00418.1
COORDINATES: protein motif:HMM:NF039714.1
COORDINATES: protein motif:HMM:TIGR00157.1
GO:0005525 - GTP binding [Evidence IEA]; GO:0043022 - ribosome binding [Evidence IEA]
ribosome small subunit-dependent GTPase A
COORDINATES: similar to AA sequence:RefSeq:WP_014243641.1
COORDINATES: protein motif:HMM:NF021049.2
COORDINATES: protein motif:HMM:NF004396.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0070063 - RNA polymerase binding [Evidence IEA]
GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024260.2
COORDINATES: protein motif:HMM:NF018604.2
COORDINATES: protein motif:HMM:NF015720.2
COORDINATES: protein motif:HMM:NF017773.2
COORDINATES: protein motif:HMM:NF015523.2
four-helix bundle copper-binding protein
COORDINATES: protein motif:HMM:NF014345.2
COORDINATES: protein motif:HMM:NF013340.2
YbhB/YbcL family Raf kinase inhibitor-like protein
COORDINATES: protein motif:HMM:TIGR02143.1
GO:0030697 - S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity [Evidence IEA]
tRNA (uridine(54)-C5)-methyltransferase TrmA
COORDINATES: similar to AA sequence:RefSeq:WP_000903073.1
COORDINATES: protein motif:HMM:NF018446.2
GO:0005267 - potassium channel activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014045.2
COORDINATES: protein motif:HMM:NF019928.2
COORDINATES: protein motif:HMM:NF014273.2
GO:0005576 - extracellular region [Evidence IEA]
COORDINATES: protein motif:HMM:NF021983.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243176.1
GO:0008509 - monoatomic anion transmembrane transporter activity [Evidence IEA]
GO:0006820 - monoatomic anion transport [Evidence IEA]
DASS family sodium-coupled anion symporter
COORDINATES: similar to AA sequence:RefSeq:WP_009380143.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244022.1
COORDINATES: protein motif:HMM:TIGR00198.1
GO:0004096 - catalase activity [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF022608.2
COORDINATES: protein motif:HMM:NF040340.1
COORDINATES: protein motif:HMM:NF012534.2
COORDINATES: protein motif:HMM:NF018663.2
COORDINATES: protein motif:HMM:NF012363.2
COORDINATES: protein motif:HMM:NF018893.2
COORDINATES: protein motif:HMM:TIGR02962.1
GO:0019628 - urate catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: protein motif:HMM:NF037625.2
COORDINATES: protein motif:HMM:TIGR03491.1
TM0106 family RecB-like putative nuclease
COORDINATES: protein motif:HMM:NF025625.2
COORDINATES: protein motif:HMM:NF016443.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0009036 - type II site-specific deoxyribonuclease activity [Evidence IEA]
GO:0009307 - DNA restriction-modification system [Evidence IEA]
DpnII family type II restriction endonuclease
COORDINATES: protein motif:HMM:NF014177.2
GO:0009007 - site-specific DNA-methyltransferase (adenine-specific) activity [Evidence IEA]
GO:0032775 - DNA methylation on adenine [Evidence IEA]
COORDINATES: protein motif:HMM:NF019149.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0000150 - DNA strand exchange activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013593.2
COORDINATES: protein motif:HMM:NF019313.2
COORDINATES: protein motif:HMM:NF014581.2
DDE-type integrase/transposase/recombinase
COORDINATES: protein motif:HMM:NF016178.2
COORDINATES: protein motif:HMM:NF037510.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF00023
COORDINATES: protein motif:HMM:NF023056.2
COORDINATES: protein motif:HMM:NF013591.2
COORDINATES: protein motif:HMM:NF016875.2
type II toxin-antitoxin system RelE/ParE family toxin
GO:0003677 - DNA binding [Evidence IEA]; GO:0004519 - endonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF006118.0
COORDINATES: protein motif:HMM:NF013395.2
COORDINATES: protein motif:HMM:NF018508.2
COORDINATES: protein motif:HMM:TIGR02802.1
peptidoglycan-associated lipoprotein Pal
COORDINATES: protein motif:HMM:NF025704.2
COORDINATES: protein motif:HMM:NF024572.2
COORDINATES: protein motif:HMM:NF024827.2
COORDINATES: protein motif:HMM:NF014728.2
COORDINATES: protein motif:HMM:NF001454.0
GO:0008556 - P-type potassium transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
potassium-transporting ATPase subunit KdpC
COORDINATES: similar to AA sequence:RefSeq:WP_011941713.1
GO:0031004 - potassium ion-transporting ATPase complex [Evidence IEA]
potassium-transporting ATPase subunit KdpB
COORDINATES: protein motif:HMM:TIGR00680.1
potassium-transporting ATPase subunit KdpA
COORDINATES: protein motif:HMM:TIGR03723.1
tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD
COORDINATES: protein motif:HMM:NF012616.2
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_014243411.1
COORDINATES: protein motif:HMM:TIGR02937.1
sigma-70 family RNA polymerase sigma factor
COORDINATES: protein motif:HMM:NF012509.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243404.1
GO:0006166 - purine ribonucleoside salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243403.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004797 - thymidine kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021351.2
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF013528.2
bifunctional oligoribonuclease/PAP phosphatase NrnA
COORDINATES: similar to AA sequence:RefSeq:WP_014243395.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243393.1
GO:0005886 - plasma membrane [Evidence IEA]; GO:0031317 - tripartite ATP-independent periplasmic transporter complex [Evidence IEA]
GO:0015556 - C4-dicarboxylate transmembrane transporter activity [Evidence IEA]
GO:0015740 - C4-dicarboxylate transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF016200.2
COORDINATES: protein motif:HMM:NF028121.2
TRAP transporter TatT component family protein
COORDINATES: protein motif:HMM:TIGR00172.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243384.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF012993.2
carbon-nitrogen hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014245268.1
GO:0004540 - ribonuclease activity [Evidence IEA]
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245271.1
GO:0006206 - pyrimidine nucleobase metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF006054.0
GO:0004731 - purine-nucleoside phosphorylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF004064.0
GO:0004126 - cytidine deaminase activity [Evidence IEA]
GO:0008655 - pyrimidine-containing compound salvage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245196.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245197.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpX
COORDINATES: similar to AA sequence:RefSeq:WP_014245198.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245199.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245203.1
COORDINATES: protein motif:HMM:NF015559.2
COORDINATES: protein motif:HMM:NF014951.2
COORDINATES: protein motif:HMM:NF021535.2
COORDINATES: protein motif:HMM:TIGR01574.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]; GO:0016782 - transferase activity, transferring sulphur-containing groups [Evidence IEA]
tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
COORDINATES: similar to AA sequence:RefSeq:WP_014245223.1
GO:0009368 - endopeptidase Clp complex [Evidence IEA]
GO:0004176 - ATP-dependent peptidase activity [Evidence IEA]
GO:0043335 - protein unfolding [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA]
ATP-dependent Clp protease ATP-binding subunit ClpA
COORDINATES: similar to AA sequence:RefSeq:WP_014245224.1
COORDINATES: protein motif:HMM:TIGR00741.1
GO:0022626 - cytosolic ribosome [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA]
GO:0045182 - translation regulator activity [Evidence IEA]
GO:0009386 - translational attenuation [Evidence IEA]
ribosome-associated translation inhibitor RaiA
COORDINATES: protein motif:HMM:TIGR02395.1
GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245229.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0015221 - lipopolysaccharide transmembrane transporter activity [Evidence IEA]
GO:0015920 - lipopolysaccharide transport [Evidence IEA]
LPS export ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015901.2
COORDINATES: protein motif:HMM:TIGR01070.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0030983 - mismatched DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019882731.1
COORDINATES: protein motif:HMM:NF014582.2
COORDINATES: protein motif:HMM:NF001750.0
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF016839.2
septum formation initiator family protein
COORDINATES: protein motif:HMM:NF014389.2
YhjD/YihY/BrkB family envelope integrity protein
COORDINATES: protein motif:HMM:NF004421.0
GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01249.1
GO:0004177 - aminopeptidase activity [Evidence IEA]
GO:0030163 - protein catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014731.2
COORDINATES: protein motif:HMM:NF013742.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245245.1
GO:0046417 - chorismate metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016189.2
COORDINATES: protein motif:HMM:NF024676.2
COORDINATES: protein motif:HMM:NF012640.2
COORDINATES: protein motif:HMM:TIGR00665.1
COORDINATES: protein motif:HMM:TIGR00158.1
COORDINATES: protein motif:HMM:NF021506.2
COORDINATES: protein motif:HMM:NF013419.2
COORDINATES: protein motif:HMM:NF006156.0
GO:0004450 - isocitrate dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00644.1
GO:0008297 - single-stranded DNA exodeoxyribonuclease activity [Evidence IEA]
single-stranded-DNA-specific exonuclease RecJ
COORDINATES: similar to AA sequence:RefSeq:WP_014243349.1
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: similar to AA sequence:RefSeq:WP_003546554.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243698.1
COORDINATES: nucleotide motif:Rfam:14.4:RF01689
The adenosylcobalamin-variant (AdoCbl-variant) riboswitch is found in the 5'-untranslated regions of vitamin B12 (Cobalamin) related genes in bacteria; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:NF013440.2
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243341.1
Spx/MgsR family RNA polymerase-binding regulatory protein
COORDINATES: similar to AA sequence:RefSeq:WP_014243323.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243322.1
GO:0008760 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity [Evidence IEA]
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
COORDINATES: protein motif:HMM:TIGR00536.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243320.1
GO:0016149 - translation release factor activity, codon specific [Evidence IEA]
COORDINATES: protein motif:HMM:NF018798.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243319.1
GO:0008186 - ATP-dependent activity, acting on RNA [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015607.2
COORDINATES: protein motif:HMM:TIGR00247.1
GO:0008932 - lytic endotransglycosylase activity [Evidence IEA]
GO:0071555 - cell wall organization [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00546.1
GO:0042158 - lipoprotein biosynthetic process [Evidence IEA]; GO:0006497 - protein lipidation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00393.1
GO:0016853 - isomerase activity [Evidence IEA]
KpsF/GutQ family sugar-phosphate isomerase
COORDINATES: protein motif:HMM:NF025030.2
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_009241594.1
COORDINATES: protein motif:HMM:NF013606.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243302.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: protein motif:HMM:TIGR00671.1
GO:0004594 - pantothenate kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014244926.1
tRNA threonylcarbamoyladenosine dehydratase
COORDINATES: protein motif:HMM:NF014669.2
MarR family winged helix-turn-helix transcriptional regulator
COORDINATES: protein motif:HMM:NF014573.2
COORDINATES: protein motif:HMM:TIGR01510.1
GO:0004595 - pantetheine-phosphate adenylyltransferase activity [Evidence IEA]
pantetheine-phosphate adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_019235960.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00398.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020977.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245411.1
COORDINATES: protein motif:HMM:NF024852.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243174.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245412.1
COORDINATES: similar to AA sequence:RefSeq:WP_014244873.1
GO:0004175 - endopeptidase activity [Evidence IEA]; GO:0009002 - serine-type D-Ala-D-Ala carboxypeptidase activity [Evidence IEA]
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
COORDINATES: protein motif:HMM:NF013408.2
COORDINATES: protein motif:HMM:NF014269.2
LON peptidase substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:TIGR00005.1
COORDINATES: protein motif:HMM:NF014619.2
vitamin K epoxide reductase family protein
PP2C family protein-serine/threonine phosphatase
COORDINATES: similar to AA sequence:RefSeq:WP_014245425.1
COORDINATES: protein motif:HMM:NF001961.0
COORDINATES: protein motif:HMM:NF040138.1
COORDINATES: protein motif:HMM:TIGR00810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245431.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012517.2
GO:0016705 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [Evidence IEA]
COORDINATES: protein motif:HMM:NF012389.2
COORDINATES: similar to AA sequence:RefSeq:WP_011897301.1
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
type I glyceraldehyde-3-phosphate dehydrogenase
GO:0003676 - nucleic acid binding [Evidence IEA]
OB-fold nucleic acid binding domain-containing protein
COORDINATES: protein motif:HMM:NF013166.2
COORDINATES: protein motif:HMM:NF017197.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245439.1
COORDINATES: protein motif:HMM:NF024792.2
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015956.2
COORDINATES: protein motif:HMM:NF024212.2
COORDINATES: protein motif:HMM:TIGR02210.1
GO:0008360 - regulation of cell shape [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03423.1
COORDINATES: protein motif:HMM:TIGR00219.1
COORDINATES: protein motif:HMM:NF025010.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245462.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245464.1
COORDINATES: protein motif:HMM:TIGR02530.1
TIGR02530 family flagellar biosynthesis protein
COORDINATES: protein motif:HMM:NF025230.2
flagellar hook capping FlgD N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02473.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245470.1
COORDINATES: protein motif:HMM:NF014196.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245472.1
GO:0009433 - bacterial-type flagellum basal body, C ring [Evidence IEA]
GO:0006935 - chemotaxis [Evidence IEA]; GO:0001539 - cilium or flagellum-dependent cell motility [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00206.1
GO:0009431 - bacterial-type flagellum basal body, MS ring [Evidence IEA]
flagellar basal-body MS-ring/collar protein FliF
COORDINATES: protein motif:HMM:TIGR00205.1
flagellar hook-basal body complex protein FliE
COORDINATES: similar to AA sequence:RefSeq:WP_014245475.1
COORDINATES: similar to AA sequence:RefSeq:WP_014245476.1
GO:0009429 - bacterial-type flagellum basal body, proximal rod [Evidence IEA]
COORDINATES: protein motif:HMM:NF024834.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245481.1
GO:0004478 - methionine adenosyltransferase activity [Evidence IEA]
GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF019850.2
COORDINATES: similar to AA sequence:RefSeq:WP_016291309.1
GO:0050242 - pyruvate, phosphate dikinase activity [Evidence IEA]
GO:0015976 - carbon utilization [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014245487.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF023393.2
recombination protein O N-terminal domain-containing protein
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00046.1
GO:0016436 - rRNA (uridine) methyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013286.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243099.1
COORDINATES: protein motif:HMM:NF025072.2
COORDINATES: protein motif:HMM:NF024905.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245495.1
UDP-glucose/GDP-mannose dehydrogenase family protein
COORDINATES: protein motif:HMM:NF013324.2
COORDINATES: similar to AA sequence:RefSeq:WP_014245498.1
COORDINATES: protein motif:HMM:NF017743.2
class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF024855.2
COORDINATES: protein motif:HMM:NF013079.2
tRNA (cytidine(34)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF024758.2
trypsin-like peptidase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00544.1
GO:0009249 - protein lipoylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_000457386.1
COORDINATES: similar to AA sequence:RefSeq:WP_002778821.1
COORDINATES: protein motif:HMM:NF008954.0
COORDINATES: protein motif:HMM:TIGR00090.1
GO:0043022 - ribosome binding [Evidence IEA]
GO:0017148 - negative regulation of translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014629.2
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH
COORDINATES: protein motif:HMM:NF024813.2
COORDINATES: protein motif:HMM:NF025158.2
COORDINATES: protein motif:HMM:NF015927.2
COORDINATES: protein motif:HMM:NF002956.0
COORDINATES: protein motif:HMM:TIGR02778.1
COORDINATES: protein motif:HMM:TIGR02779.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003910 - DNA ligase (ATP) activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02777.1
DNA polymerase ligase N-terminal domain-containing protein
COORDINATES: protein motif:HMM:TIGR02772.1
GO:0045027 - DNA end binding [Evidence IEA]
GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA]
COORDINATES: protein motif:HMM:NF025013.2
COORDINATES: protein motif:HMM:NF028004.2
COORDINATES: protein motif:HMM:NF013713.2
COORDINATES: protein motif:HMM:NF016996.2
COORDINATES: protein motif:HMM:TIGR01426.1
GO:0016758 - hexosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: protein motif:HMM:TIGR00281.1
GO:0007059 - chromosome segregation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014654.2
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: protein motif:HMM:TIGR00091.1
GO:0008176 - tRNA (guanine-N7-)-methyltransferase activity [Evidence IEA]
tRNA (guanosine(46)-N7)-methyltransferase TrmB
COORDINATES: protein motif:HMM:TIGR01391.1
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
COORDINATES: protein motif:HMM:NF015912.2
RNA polymerase sigma factor region1.1 domain-containing protein
COORDINATES: protein motif:HMM:NF004208.0
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_014244897.1
GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]; GO:0004844 - uracil DNA N-glycosylase activity [Evidence IEA]
GO:0006284 - base-excision repair [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02258.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014740.2
nucleoside-diphosphate sugar epimerase/dehydratase
COORDINATES: similar to AA sequence:RefSeq:WP_019112620.1
COORDINATES: protein motif:HMM:NF017011.2
COORDINATES: protein motif:HMM:NF039767.1
COORDINATES: protein motif:HMM:TIGR04396.1
COORDINATES: protein motif:HMM:TIGR03586.1
GO:0016765 - transferase activity, transferring alkyl or aryl (other than methyl) groups [Evidence IEA]
COORDINATES: protein motif:HMM:NF014409.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243065.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase
COORDINATES: similar to AA sequence:RefSeq:WP_014243064.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting)
acylneuraminate cytidylyltransferase family protein
COORDINATES: protein motif:HMM:NF013429.2
GO:0016051 - carbohydrate biosynthetic process [Evidence IEA]
N-acetylneuraminate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014243043.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase RfbA
COORDINATES: protein motif:HMM:TIGR01181.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024054.2
COORDINATES: protein motif:HMM:NF021873.2
COORDINATES: protein motif:HMM:NF013431.2
COORDINATES: protein motif:HMM:NF024571.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243026.1
GO:0004489 - methylenetetrahydrofolate reductase (NAD(P)H) activity [Evidence IEA]
GO:0006555 - methionine metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243025.1
GO:0008705 - methionine synthase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009086 - methionine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014243019.1
GO:0004609 - phosphatidylserine decarboxylase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013219.2
COORDINATES: similar to AA sequence:RefSeq:WP_014243016.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243015.1
COORDINATES: similar to AA sequence:RefSeq:WP_014243014.1
COORDINATES: similar to AA sequence:RefSeq:WP_006779552.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_014242997.1
COORDINATES: protein motif:HMM:NF004397.1
GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006261 - DNA-templated DNA replication [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242992.1
GO:0015036 - disulfide oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242991.1
GO:0008968 - D-sedoheptulose 7-phosphate isomerase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012789.2
COORDINATES: protein motif:HMM:NF024117.2
COORDINATES: protein motif:HMM:NF013589.2
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF014695.2
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF004349.1
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004832 - valine-tRNA ligase activity [Evidence IEA]
GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00115.1
GO:0005854 - nascent polypeptide-associated complex [Evidence IEA]
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0051082 - unfolded protein binding [Evidence IEA]
GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00473.1
GO:0003882 - CDP-diacylglycerol-serine O-phosphatidyltransferase activity [Evidence IEA]
CDP-diacylglycerol--serine O-phosphatidyltransferase
COORDINATES: protein motif:HMM:TIGR00055.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242952.1
GO:0008135 - translation factor activity, RNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242951.1
GO:0033862 - UMP kinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018286770.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242949.1
COORDINATES: protein motif:HMM:NF013727.2
COORDINATES: protein motif:HMM:NF012387.2
COORDINATES: protein motif:HMM:NF007914.0
COORDINATES: protein motif:HMM:NF015582.2
cytochrome C oxidase subunit IV family protein
COORDINATES: protein motif:HMM:NF012720.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242941.1
GO:0004129 - cytochrome-c oxidase activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
GO:0009060 - aerobic respiration [Evidence IEA]
cbb3-type cytochrome c oxidase subunit I
COORDINATES: protein motif:HMM:TIGR02866.1
COORDINATES: protein motif:HMM:TIGR01473.1
GO:0008495 - protoheme IX farnesyltransferase activity [Evidence IEA]
GO:0006783 - heme biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242937.1
GO:0020037 - heme binding [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
tryptophan 2,3-dioxygenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014242936.1
COORDINATES: protein motif:HMM:NF016153.2
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012262.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242929.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
cytochrome b N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014242928.1
ubiquinol-cytochrome c reductase iron-sulfur subunit
COORDINATES: protein motif:HMM:TIGR01930.1
COORDINATES: protein motif:HMM:NF004326.0
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
GO:0005247 - voltage-gated chloride channel activity [Evidence IEA]
GO:0006821 - chloride transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF001484.0
GO:0004360 - glutamine-fructose-6-phosphate transaminase (isomerizing) activity [Evidence IEA]
GO:0006040 - amino sugar metabolic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
glutamine--fructose-6-phosphate transaminase (isomerizing)
COORDINATES: protein motif:HMM:TIGR01173.1
GO:0019134 - glucosamine-1-phosphate N-acetyltransferase activity [Evidence IEA]; GO:0003977 - UDP-N-acetylglucosamine diphosphorylase activity [Evidence IEA]
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
COORDINATES: similar to AA sequence:RefSeq:WP_014242913.1
COORDINATES: protein motif:HMM:NF040127.1
COORDINATES: protein motif:HMM:TIGR03177.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242892.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242891.1
COORDINATES: protein motif:HMM:NF024917.2
COORDINATES: protein motif:HMM:NF014705.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242887.1
COORDINATES: protein motif:HMM:TIGR04552.1
COORDINATES: protein motif:HMM:NF016489.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242881.1
GO:0008094 - ATP-dependent activity, acting on DNA [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
COORDINATES: protein motif:HMM:NF014668.2
COORDINATES: protein motif:HMM:TIGR00344.1
GO:0004813 - alanine-tRNA ligase activity [Evidence IEA]
GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242874.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242873.1
COORDINATES: protein motif:HMM:NF036483.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242868.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242867.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242861.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242860.1
COORDINATES: protein motif:HMM:TIGR02515.1
GO:0009297 - pilus assembly [Evidence IEA]; GO:0009306 - protein secretion [Evidence IEA]
COORDINATES: protein motif:HMM:NF016254.2
COORDINATES: protein motif:HMM:NF016253.2
GO:0043683 - type IV pilus assembly [Evidence IEA]; GO:0043107 - type IV pilus-dependent motility [Evidence IEA]
COORDINATES: protein motif:HMM:NF016992.2
COORDINATES: protein motif:HMM:TIGR01175.1
COORDINATES: protein motif:HMM:NF013632.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242847.1
type IV pilus twitching motility protein PilT
COORDINATES: protein motif:HMM:NF020090.2
COORDINATES: protein motif:HMM:NF004162.0
GO:0003919 - FMN adenylyltransferase activity [Evidence IEA]
bifunctional riboflavin kinase/FAD synthetase
COORDINATES: protein motif:HMM:NF024973.2
COORDINATES: protein motif:HMM:NF012321.2
COORDINATES: protein motif:HMM:NF013998.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242838.1
COORDINATES: protein motif:HMM:NF012700.2
penicillin-binding transpeptidase domain-containing protein
COORDINATES: protein motif:HMM:NF013500.2
COORDINATES: protein motif:HMM:NF018852.2
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00208.1
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242811.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242810.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242808.1
D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase
COORDINATES: protein motif:HMM:NF018076.2
50S ribosomal protein L11 methyltransferase
COORDINATES: protein motif:HMM:NF004018.0
COORDINATES: protein motif:HMM:TIGR00065.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242798.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
GO:0043093 - FtsZ-dependent cytokinesis [Evidence IEA]
COORDINATES: protein motif:HMM:NF013714.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01082.1
GO:0008763 - UDP-N-acetylmuramate-L-alanine ligase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02614.1
GO:0051301 - cell division [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242792.1
GO:0008963 - phospho-N-acetylmuramoyl-pentapeptide-transferase activity [Evidence IEA]
phospho-N-acetylmuramoyl-pentapeptide- transferase
COORDINATES: protein motif:HMM:TIGR01143.1
GO:0047480 - UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity [Evidence IEA]
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase
COORDINATES: protein motif:HMM:TIGR01085.1
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase
COORDINATES: protein motif:HMM:TIGR00006.1
GO:0016434 - rRNA (cytosine) methyltransferase activity [Evidence IEA]
16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH
COORDINATES: similar to AA sequence:RefSeq:WP_014242786.1
GO:0017061 - S-methyl-5-thioadenosine phosphorylase activity [Evidence IEA]
GO:0006168 - adenine salvage [Evidence IEA]; GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242784.1
COORDINATES: protein motif:HMM:TIGR00615.1
COORDINATES: protein motif:HMM:TIGR00103.1
YbaB/EbfC family nucleoid-associated protein
COORDINATES: protein motif:HMM:TIGR02397.1
GO:0009360 - DNA polymerase III complex [Evidence IEA]
GO:0003887 - DNA-directed DNA polymerase activity [Evidence IEA]
signal recognition particle sRNA small type
COORDINATES: nucleotide motif:Rfam:14.4:RF00169
COORDINATES: protein motif:HMM:TIGR02254.1
GO:0008253 - 5'-nucleotidase activity [Evidence IEA]
YjjG family noncanonical pyrimidine nucleotidase
COORDINATES: protein motif:HMM:NF019042.2
COORDINATES: protein motif:HMM:TIGR00975.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:NF040105.1
COORDINATES: protein motif:HMM:NF023418.2
transglutaminase domain-containing protein
COORDINATES: protein motif:HMM:NF025614.2
CPXCG motif-containing cysteine-rich protein
COORDINATES: protein motif:HMM:NF017853.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: protein motif:HMM:TIGR01972.1
COORDINATES: protein motif:HMM:NF005141.0
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF004320.0
GO:0016651 - oxidoreductase activity, acting on NAD(P)H [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoK
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF004741.0
NADH-quinone oxidoreductase subunit NuoH
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: protein motif:HMM:TIGR01770.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242760.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242758.1
COORDINATES: similar to AA sequence:RefSeq:WP_014242755.1
COORDINATES: protein motif:HMM:TIGR00580.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003690 - double-stranded DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024545.2
COORDINATES: protein motif:HMM:NF020872.2
SurA N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF016084.2
4-hydroxythreonine-4-phosphate dehydrogenase PdxA
COORDINATES: similar to AA sequence:RefSeq:WP_014242750.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF012365.2
COORDINATES: protein motif:HMM:TIGR01131.1
GO:0000276 - mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045264 - plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]; GO:0045263 - proton-transporting ATP synthase complex, coupling factor F(o) [Evidence IEA]
COORDINATES: protein motif:HMM:NF012999.2
COORDINATES: protein motif:HMM:NF015735.2
COORDINATES: similar to AA sequence:RefSeq:WP_014242736.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
GO:0006259 - DNA metabolic process [Evidence IEA]; GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014242735.1
GO:0009330 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex [Evidence IEA]
GO:0003918 - DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity [Evidence IEA]
DNA topoisomerase (ATP-hydrolyzing) subunit B
GO:0005524 - ATP binding [Evidence IEA]; GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
All proteins in this family for which functions are known are DNA-binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00663.1