Theropithecus gelada isolate Dixy chromosome 18, Tgel_1.0, whole genome shotgun sequence.
type: Entry
definition: Theropithecus gelada isolate Dixy chromosome 18, Tgel_1.0, whole genome shotgun sequence.
sequence version: NC_037686.1
sequence date: 2018-06-29
sequence: sequence
division: CON
label: NC_037686.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA477372
dblink: SAMN09197221
keyword: WGS
keyword: RefSeq
source: Theropithecus gelada (gelada)
organism: Theropithecus gelada
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Theropithecus.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM009968.1.\nAssembly name: Tgel_1.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the University of Washington on\n2018/06/19. The original whole-genome shotgun project has the\naccession QGDE00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Kenneth Chiou's shared submissions\nAssembly Date :: APR-2018\nAssembly Method :: Supernova v. APR-2018; 3D-DNA v. APR-2018\nAssembly Name :: Tgel_1.0\nGenome Representation :: Full\nExpected Final Version :: Yes\nGenome Coverage :: 56.0x\nSequencing Technology :: Illumina HiSeq\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Theropithecus gelada Annotation\n Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.1\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 72621969
topology: linear
so has quality: SO_0000987
location: 1..72621969
location: region:1-72621969:1
RO_0002162: 9565

NC_037686
type: RefSeq
SIO_000068: refseq

PRJNA477372
type: BioProject
SIO_000068: bioproject

SAMN09197221
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:72621969:1
position: 72621969
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-72621969:1:source
so part of: sequence
organism: Theropithecus gelada
mol type: genomic DNA
isolate: Dixy
chromosome: 18
sex: female
tissue type: whole blood
dev stage: adult
country: Ethiopia: Simien Mountains
collection date: Nov-2017
collected by: Simien Mountains Gelada Research Project

9565
type: Taxonomy
SIO_000068: taxonomy

MC2R
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: MC2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 22896..31601
location: region:22896-31601:1
so has part: feature:22896-31601:1:exon
subclass of: SO_0000010

112611601
type: Gene
SIO_000068: ncbigene

position:22896:1
position: 22896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31601:1
position: 31601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22896-31601:1:exon

MC2R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MC2R
product: melanocortin 2 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 9 ESTs, 6 Proteins
transcript id: XM_025365566.1
SIO_010081: MC2R
subclass of: SO_0000673
so part of: MC2R
location: join(22896..22948,30126..31601)
location: region:22896-31601:1
so has part: feature:22896-22948:1:exon
so has part: feature:30126-31601:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22896-22948:1:exon

position:22948:1
position: 22948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:30126-31601:1:exon

position:30126:1
position: 30126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

MC2R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MC2R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: adrenocorticotropic hormone receptor
translation: MKHIINSHENINATAGDNSDCPRVVLPEEIFFTISIVGVLENLIVLLAVFKNKNLQAPMYFFICSLAISDMLGSLYKILENILIILRNMGYLKPRGSFETTADDIIDSLFVLSLLGSIFSLSVIAADRYITIFHALRYHSIVTMRRTVVVLAVIWTFCTASGIAMVIFSHHVPTVITFTSLFPLMLVFILCLYVHMFLLARSHTRKISTLPRTNMKGAITLTILLGVFIFCWAPFVLHVLLMTFCPSNPYCACYMSLFQVNGMLIMCNAVIDPFIYAFRSPELRDAFTKMVFCSSTASRTDP
SIO_010081: MC2R
subclass of: SO_0000673
so part of: MC2R
location: 30237..31145
location: region:30237-31145:1
so has part: feature:30237-31145:1:exon

XP_025221351.1
type: Protein
SIO_000068: ncbiprotein

position:30237:1
position: 30237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:31145:1
position: 31145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:30237-31145:1:exon

MC5R
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: MC5R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(47361..49945)
location: region:47361-49945:-1
so has part: feature:47361-49945:-1:exon
subclass of: SO_0000010

112611608
type: Gene
SIO_000068: ncbigene

position:47361:-1
position: 47361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:49945:-1
position: 49945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47361-49945:-1:exon

MC5R
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MC5R
product: melanocortin 5 receptor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 9 Proteins
transcript id: XM_025365570.1
SIO_010081: MC5R
subclass of: SO_0000673
so part of: MC5R
location: complement(join(47361..48377,49826..49945))
location: region:47361-49945:-1
so has part: feature:49826-49945:-1:exon
so has part: feature:47361-48377:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:49826-49945:-1:exon

position:49826:-1
position: 49826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:47361-48377:-1:exon

position:48377:-1
position: 48377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MC5R
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MC5R
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: melanocortin receptor 5
translation: MNSSFHLHFLDLNLNATEGNLSGPSVRNKSSPCENMGIAVEVFLTLGAISLVENILVIGAIVKNKNLHCPMYFFVCSLAVADMLVSMSNAWETITIYLLNNKHLVIADAFVRHIDNVFDSMICISVVASMCSLLAIAVDRYLTIFYALRYHHIMTARRSGAIIAGIWAFCTGCGIVFILYSESTYVILCLISMFFTMLFLLVALYIHMFLLARTHVKRMAALPGASSARQRTSMQGAVTLTMLLGVFIVCWAPFFLHLILMLSCPQNLYCSCFMSHFNMYLILIMCNSVVDPLIYAFRSREMRKTFKEIICCPGFRIACSCPGRD
SIO_010081: MC5R
subclass of: SO_0000673
so part of: MC5R
location: complement(47361..48338)
location: region:47361-48338:-1
so has part: feature:47361-48338:-1:exon

XP_025221355.1
type: Protein
SIO_000068: ncbiprotein

position:48338:-1
position: 48338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:47361-48338:-1:exon

RNMT
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: RNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(84429..127295)
location: region:84429-127295:-1
so has part: feature:84429-127295:-1:exon
subclass of: SO_0000010

112611538
type: Gene
SIO_000068: ncbigene

position:84429:-1
position: 84429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:127295:-1
position: 127295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84429-127295:-1:exon

RNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: RNMT
product: RNA guanine-7 methyltransferase, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 213 ESTs, 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365473.1
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(84429..89009,95724..95757,96817..96918,103510..103627,106676..106840,107710..107891,109940..110052,113136..113261,116634..116769,121610..122068,127226..127295))
location: region:84429-127295:-1
so has part: feature:127226-127295:-1:exon
so has part: feature:121610-122068:-1:exon
so has part: feature:116634-116769:-1:exon
so has part: feature:113136-113261:-1:exon
so has part: feature:109940-110052:-1:exon
so has part: feature:107710-107891:-1:exon
so has part: feature:106676-106840:-1:exon
so has part: feature:103510-103627:-1:exon
so has part: feature:96817-96918:-1:exon
so has part: feature:95724-95757:-1:exon
so has part: feature:84429-89009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127226-127295:-1:exon

position:127226:-1
position: 127226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121610-122068:-1:exon

position:121610:-1
position: 121610
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122068:-1
position: 122068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:116634-116769:-1:exon

position:116634:-1
position: 116634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:116769:-1
position: 116769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:113136-113261:-1:exon

position:113136:-1
position: 113136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:113261:-1
position: 113261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:109940-110052:-1:exon

position:109940:-1
position: 109940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:110052:-1
position: 110052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:107710-107891:-1:exon

position:107710:-1
position: 107710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:107891:-1
position: 107891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:106676-106840:-1:exon

position:106676:-1
position: 106676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:106840:-1
position: 106840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:103510-103627:-1:exon

position:103510:-1
position: 103510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:103627:-1
position: 103627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:96817-96918:-1:exon

position:96817:-1
position: 96817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96918:-1
position: 96918
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:95724-95757:-1:exon

position:95724:-1
position: 95724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95757:-1
position: 95757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:84429-89009:-1:exon

position:89009:-1
position: 89009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RNMT
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: RNMT
product: RNA guanine-7 methyltransferase, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 206 ESTs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365472.1
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(84429..89009,95724..95757,96817..96918,103510..103627,106676..106840,107710..107891,109940..110052,113136..113261,116634..116769,121610..122068,122800..122928,127226..127295))
location: region:84429-127295:-1
so has part: feature:127226-127295:-1:exon
so has part: feature:122800-122928:-1:exon
so has part: feature:121610-122068:-1:exon
so has part: feature:116634-116769:-1:exon
so has part: feature:113136-113261:-1:exon
so has part: feature:109940-110052:-1:exon
so has part: feature:107710-107891:-1:exon
so has part: feature:106676-106840:-1:exon
so has part: feature:103510-103627:-1:exon
so has part: feature:96817-96918:-1:exon
so has part: feature:95724-95757:-1:exon
so has part: feature:84429-89009:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127226-127295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:122800-122928:-1:exon

position:122800:-1
position: 122800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122928:-1
position: 122928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:121610-122068:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:116634-116769:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:113136-113261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:109940-110052:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:107710-107891:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:106676-106840:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:103510-103627:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:96817-96918:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:95724-95757:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:84429-89009:-1:exon

RNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: RNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA cap guanine-N7 methyltransferase
translation: MANSTKAEEYEKMSLEQAKVSVNSETESSFDINENTTASGTGLSEKTSVCRQVDTARKRKEFEDDLVKESSSCGEDTLSKKRKLDPEIVPEEKDCGDDEGNSKKRKRETEDVPKVEYSTGDGTQNKRKIALEDVPEKQKNLEEGHSSAVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSIKQCQQRYEDMKNRRDSEYIFSAEFITADCSKELLIEKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEPYPANESSKLVSERVDDYEHAAKYMKNSQVKLPLGTLSKSEWEATSIYLVFAFEKQQ
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(88972..89009,95724..95757,96817..96918,103510..103627,106676..106840,107710..107891,109940..110052,113136..113261,116634..116769,121610..122026))
location: region:88972-122026:-1
so has part: feature:121610-122026:-1:exon
so has part: feature:116634-116769:-1:exon
so has part: feature:113136-113261:-1:exon
so has part: feature:109940-110052:-1:exon
so has part: feature:107710-107891:-1:exon
so has part: feature:106676-106840:-1:exon
so has part: feature:103510-103627:-1:exon
so has part: feature:96817-96918:-1:exon
so has part: feature:95724-95757:-1:exon
so has part: feature:88972-89009:-1:exon

XP_025221257.1
type: Protein
SIO_000068: ncbiprotein

position:88972:-1
position: 88972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122026:-1
position: 122026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:121610-122026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116634-116769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113136-113261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109940-110052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107710-107891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:106676-106840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103510-103627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96817-96918:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95724-95757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:88972-89009:-1:exon

RNMT
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: RNMT
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: mRNA cap guanine-N7 methyltransferase
translation: MANSTKAEEYEKMSLEQAKVSVNSETESSFDINENTTASGTGLSEKTSVCRQVDTARKRKEFEDDLVKESSSCGEDTLSKKRKLDPEIVPEEKDCGDDEGNSKKRKRETEDVPKVEYSTGDGTQNKRKIALEDVPEKQKNLEEGHSSAVAAHYNELQEVGLEKRSQSRIFYLRNFNNWMKSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSIKQCQQRYEDMKNRRDSEYIFSAEFITADCSKELLIEKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIRRLEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKTFLEFYEEKIKNNENKMLLKRMQALEPYPANESSKLVSERVDDYEHAAKYMKNSQVKLPLGTLSKSEWEATSIYLVFAFEKQQ
SIO_010081: RNMT
subclass of: SO_0000673
so part of: RNMT
location: complement(join(88972..89009,95724..95757,96817..96918,103510..103627,106676..106840,107710..107891,109940..110052,113136..113261,116634..116769,121610..122026))
location: region:88972-122026:-1
so has part: feature:121610-122026:-1:exon
so has part: feature:116634-116769:-1:exon
so has part: feature:113136-113261:-1:exon
so has part: feature:109940-110052:-1:exon
so has part: feature:107710-107891:-1:exon
so has part: feature:106676-106840:-1:exon
so has part: feature:103510-103627:-1:exon
so has part: feature:96817-96918:-1:exon
so has part: feature:95724-95757:-1:exon
so has part: feature:88972-89009:-1:exon

XP_025221258.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:121610-122026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:116634-116769:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:113136-113261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:109940-110052:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:107710-107891:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:106676-106840:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:103510-103627:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:96817-96918:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:95724-95757:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:88972-89009:-1:exon

FAM210A
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: FAM210A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 127368..192270
location: region:127368-192270:1
so has part: feature:127368-192270:1:exon
subclass of: SO_0000010

112611583
type: Gene
SIO_000068: ncbigene

position:127368:1
position: 127368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:192270:1
position: 192270
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127368-192270:1:exon

FAM210A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: FAM210A
product: family with sequence similarity 210 member A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365539.1
SIO_010081: FAM210A
subclass of: SO_0000673
so part of: FAM210A
location: join(127368..127618,168178..168678,185639..185750,191207..192270)
location: region:127368-192270:1
so has part: feature:127368-127618:1:exon
so has part: feature:168178-168678:1:exon
so has part: feature:185639-185750:1:exon
so has part: feature:191207-192270:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:127368-127618:1:exon

position:127618:1
position: 127618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:168178-168678:1:exon

position:168178:1
position: 168178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:168678:1
position: 168678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:185639-185750:1:exon

position:185639:1
position: 185639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:185750:1
position: 185750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:191207-192270:1:exon

position:191207:1
position: 191207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

FAM210A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: FAM210A
product: family with sequence similarity 210 member A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365538.1
SIO_010081: FAM210A
subclass of: SO_0000673
so part of: FAM210A
location: join(127423..127618,133758..133885,168178..168678,185639..185750,191207..192270)
location: region:127423-192270:1
so has part: feature:127423-127618:1:exon
so has part: feature:133758-133885:1:exon
so has part: feature:168178-168678:1:exon
so has part: feature:185639-185750:1:exon
so has part: feature:191207-192270:1:exon

position:127423:1
position: 127423
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:127423-127618:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:133758-133885:1:exon

position:133758:1
position: 133758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:133885:1
position: 133885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:168178-168678:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:185639-185750:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191207-192270:1:exon

LOC112611584
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611584
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(151987..152655)
location: region:151987-152655:-1
so has part: feature:151987-152655:-1:exon

112611584
type: Gene
SIO_000068: ncbigene

position:151987:-1
position: 151987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152655:-1
position: 152655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:151987-152655:-1:exon

LOC112611584
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: LOC112611584
product: fatty acid-binding protein 5 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 35 ESTs, 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003116695.1
SIO_010081: LOC112611584
so part of: LOC112611584
location: complement(151987..152655)
location: region:151987-152655:-1
so has part: feature:151987-152655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:151987-152655:-1:exon

FAM210A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: FAM210A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM210A
translation: MQWSVPRTVSRLARRTCLEPHNAGLFGRCQNVKGPLLLCNAESKVVLLQGPQKQWLNLSAAQCVAKERRPLDAPSPQPGVLRHKQGKQHVSFKRVFSSSATAQGTPEKKEEPDPLQDKSISLYQRFKKTFRQYGKVLIPVHLITSGVWFGTFYYAALKGVNVVPFLELIGLPDSVVSILKNSQSGNALTAYALFKIATPARYTVTLGGTSFTVKYLRSHGYMSTPPPVKEYLQDRMEETKELITEKMEETKDRLTEKLQETKEKVSFKKKVE
SIO_010081: FAM210A
subclass of: SO_0000673
so part of: FAM210A
location: join(168206..168678,185639..185750,191207..191440)
location: region:168206-191440:1
so has part: feature:168206-168678:1:exon
so has part: feature:185639-185750:1:exon
so has part: feature:191207-191440:1:exon

XP_025221323.1
type: Protein
SIO_000068: ncbiprotein

position:168206:1
position: 168206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191440:1
position: 191440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:168206-168678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185639-185750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191207-191440:1:exon

FAM210A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: FAM210A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein FAM210A
translation: MQWSVPRTVSRLARRTCLEPHNAGLFGRCQNVKGPLLLCNAESKVVLLQGPQKQWLNLSAAQCVAKERRPLDAPSPQPGVLRHKQGKQHVSFKRVFSSSATAQGTPEKKEEPDPLQDKSISLYQRFKKTFRQYGKVLIPVHLITSGVWFGTFYYAALKGVNVVPFLELIGLPDSVVSILKNSQSGNALTAYALFKIATPARYTVTLGGTSFTVKYLRSHGYMSTPPPVKEYLQDRMEETKELITEKMEETKDRLTEKLQETKEKVSFKKKVE
SIO_010081: FAM210A
subclass of: SO_0000673
so part of: FAM210A
location: join(168206..168678,185639..185750,191207..191440)
location: region:168206-191440:1
so has part: feature:168206-168678:1:exon
so has part: feature:185639-185750:1:exon
so has part: feature:191207-191440:1:exon

XP_025221324.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:168206-168678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:185639-185750:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:191207-191440:1:exon

LOC112611582
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611582
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(174678..178106)
location: region:174678-178106:-1
so has part: feature:174678-178106:-1:exon

112611582
type: Gene
SIO_000068: ncbigene

position:174678:-1
position: 174678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:178106:-1
position: 178106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:174678-178106:-1:exon

LOC112611582
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: LOC112611582
product: forkhead box protein M1 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 ESTs, 10 Proteins, and 84% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003116694.1
SIO_010081: LOC112611582
so part of: LOC112611582
location: complement(join(174678..174922,175642..178106))
location: region:174678-178106:-1
so has part: feature:175642-178106:-1:exon
so has part: feature:174678-174922:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:175642-178106:-1:exon

position:175642:-1
position: 175642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:174678-174922:-1:exon

position:174922:-1
position: 174922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LDLRAD4
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(209680..617478)
location: region:209680-617478:-1
so has part: feature:209680-617478:-1:exon
subclass of: SO_0000010

112611457
type: Gene
SIO_000068: ncbigene

position:209680:-1
position: 209680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617478:-1
position: 617478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:209680-617478:-1:exon

LDLRAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LDLRAD4
product: low density lipoprotein receptor class A domain containing 4, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 92 ESTs, 4 Proteins, and 56% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365264.1
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(209680..211275,212915..212968,230477..230631,239654..240455))
location: region:209680-240455:-1
so has part: feature:239654-240455:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:209680-211275:-1:exon

position:240455:-1
position: 240455
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239654-240455:-1:exon

position:239654:-1
position: 239654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230477-230631:-1:exon

position:230477:-1
position: 230477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:230631:-1
position: 230631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:212915-212968:-1:exon

position:212915:-1
position: 212915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:212968:-1
position: 212968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:209680-211275:-1:exon

position:211275:-1
position: 211275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LDLRAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LDLRAD4
product: low density lipoprotein receptor class A domain containing 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 10 Proteins, and 71% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365259.1
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210627..211275,212915..212968,230477..230631,413728..413868,465218..465638,573955..574011,574399..574481,617253..617478))
location: region:210627-617478:-1
so has part: feature:617253-617478:-1:exon
so has part: feature:574399-574481:-1:exon
so has part: feature:573955-574011:-1:exon
so has part: feature:465218-465638:-1:exon
so has part: feature:413728-413868:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:210627-211275:-1:exon

position:210627:-1
position: 210627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617253-617478:-1:exon

position:617253:-1
position: 617253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:574399-574481:-1:exon

position:574399:-1
position: 574399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574481:-1
position: 574481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:573955-574011:-1:exon

position:573955:-1
position: 573955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:574011:-1
position: 574011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:465218-465638:-1:exon

position:465218:-1
position: 465218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465638:-1
position: 465638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:413728-413868:-1:exon

position:413728:-1
position: 413728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:413868:-1
position: 413868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:212915-212968:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:210627-211275:-1:exon

LDLRAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LDLRAD4
product: low density lipoprotein receptor class A domain containing 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 52 ESTs, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365260.1
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210627..211275,230477..230631,413728..413868,465218..465638,574399..574481,617253..617453))
location: region:210627-617453:-1
so has part: feature:617253-617453:-1:exon
so has part: feature:574399-574481:-1:exon
so has part: feature:465218-465638:-1:exon
so has part: feature:413728-413868:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:210627-211275:-1:exon

position:617453:-1
position: 617453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617253-617453:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:574399-574481:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:465218-465638:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:413728-413868:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:210627-211275:-1:exon

LDLRAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LDLRAD4
product: low density lipoprotein receptor class A domain containing 4, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 44 ESTs, 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365266.1
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210627..211275,230477..230631,413728..413871))
location: region:210627-413871:-1
so has part: feature:413728-413871:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:210627-211275:-1:exon

position:413871:-1
position: 413871
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:413728-413871:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210627-211275:-1:exon

LDLRAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LDLRAD4
product: low density lipoprotein receptor class A domain containing 4, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 46 ESTs, 4 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365265.1
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210627..211275,212915..212968,230477..230631,266478..266565,309605..309771))
location: region:210627-309771:-1
so has part: feature:309605-309771:-1:exon
so has part: feature:266478-266565:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:210627-211275:-1:exon

position:309771:-1
position: 309771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:309605-309771:-1:exon

position:309605:-1
position: 309605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:266478-266565:-1:exon

position:266478:-1
position: 266478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266565:-1
position: 266565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212915-212968:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210627-211275:-1:exon

LDLRAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LDLRAD4
product: low density lipoprotein receptor class A domain containing 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 102 ESTs, 1 Protein, and 32% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365263.1
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210627..211275,230477..230631,238955..240455))
location: region:210627-240455:-1
so has part: feature:238955-240455:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:210627-211275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238955-240455:-1:exon

position:238955:-1
position: 238955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210627-211275:-1:exon

LDLRAD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LDLRAD4
product: low density lipoprotein receptor class A domain containing 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 122 ESTs, 12 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365261.1
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210627..211275,212915..212968,230477..230631,238955..240455))
location: region:210627-240455:-1
so has part: feature:238955-240455:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:210627-211275:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:238955-240455:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212915-212968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210627-211275:-1:exon

LDLRAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor class A domain-containing protein 4 isoform X2
translation: MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPSQSRRREDGLPQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISATTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210745..211275,230477..230631,413728..413868,465218..465257))
location: region:210745-465257:-1
so has part: feature:465218-465257:-1:exon
so has part: feature:413728-413868:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:210745-211275:-1:exon

XP_025221045.1
type: Protein
SIO_000068: ncbiprotein

position:210745:-1
position: 210745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:465257:-1
position: 465257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:465218-465257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413728-413868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210745-211275:-1:exon

LDLRAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor class A domain-containing protein 4 isoform X1
translation: MPEAGFQATNAFTECKFTCTSGKCLYLGSLVCNQQNDCGDNSDEENCLLVTEHPPPGIFNSELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPSQSRRREDGLPQEGCLWPSDSAAPRPGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISATTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210745..211275,212915..212968,230477..230631,413728..413868,465218..465257))
location: region:210745-465257:-1
so has part: feature:465218-465257:-1:exon
so has part: feature:413728-413868:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:210745-211275:-1:exon

XP_025221044.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:465218-465257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:413728-413868:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:212915-212968:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:210745-211275:-1:exon

LDLRAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor class A domain-containing protein 4 isoform X4
translation: MSSDHPNNSTLKKAQFKDLFLRKAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPSQSRRREDGLPQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISATTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210745..211275,230477..230631,238955..239024))
location: region:210745-239024:-1
so has part: feature:238955-239024:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:210745-211275:-1:exon

XP_025221048.1
type: Protein
SIO_000068: ncbiprotein

position:239024:-1
position: 239024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:238955-239024:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210745-211275:-1:exon

LDLRAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor class A domain-containing protein 4 isoform X3
translation: MSSDHPNNSTLKKAQFKDLFLRKAELEFAQIIIIVVVVTVMVVVIVCLLNHYKVSTRSFINRPSQSRRREDGLPQEGCLWPSDSAAPRPGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISATTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210745..211275,212915..212968,230477..230631,238955..239024))
location: region:210745-239024:-1
so has part: feature:238955-239024:-1:exon
so has part: feature:230477-230631:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:210745-211275:-1:exon

XP_025221046.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:238955-239024:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:230477-230631:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:212915-212968:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:210745-211275:-1:exon

LDLRAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor class A domain-containing protein 4 isoform X6
translation: MVVVIVCLLNHYKVSTRSFINRPSQSRRREDGLPQIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISATTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210745..211275,230477..230581))
location: region:210745-230581:-1
so has part: feature:230477-230581:-1:exon
so has part: feature:210745-211275:-1:exon

XP_025221051.1
type: Protein
SIO_000068: ncbiprotein

position:230581:-1
position: 230581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:230477-230581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:210745-211275:-1:exon

LDLRAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor class A domain-containing protein 4 isoform X5
translation: MVVVIVCLLNHYKVSTRSFINRPSQSRRREDGLPQEGCLWPSDSAAPRPGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISATTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210745..211275,212915..212968,230477..230581))
location: region:210745-230581:-1
so has part: feature:230477-230581:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:210745-211275:-1:exon

XP_025221049.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230477-230581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212915-212968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210745-211275:-1:exon

LDLRAD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LDLRAD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: low-density lipoprotein receptor class A domain-containing protein 4 isoform X5
translation: MVVVIVCLLNHYKVSTRSFINRPSQSRRREDGLPQEGCLWPSDSAAPRPGASEIMHAPRSRDRFTAPSFIQRDRFSRFQPTYPYVQHEIDLPPTISLSDGEEPPPYQGPCTLQLRDPEQQMELNRESVRAPPNRTIFDSDLIDIAMYSGGPCPPSSNSGISATTCSSNGRMEGPPPTYSEVMGHHPGASFLHHQRSNAHRGSRLQFQQNNAESTIVPIKGKDRKPGNLV
SIO_010081: LDLRAD4
subclass of: SO_0000673
so part of: LDLRAD4
location: complement(join(210745..211275,212915..212968,230477..230581))
location: region:210745-230581:-1
so has part: feature:230477-230581:-1:exon
so has part: feature:212915-212968:-1:exon
so has part: feature:210745-211275:-1:exon

XP_025221050.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:230477-230581:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:212915-212968:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:210745-211275:-1:exon

LOC112611262
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 619858..631022
location: region:619858-631022:1
so has part: feature:619858-631022:1:exon
subclass of: SO_0000011

112611262
type: Gene
SIO_000068: ncbigene

position:619858:1
position: 619858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:631022:1
position: 631022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:619858-631022:1:exon

LOC112611262
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: lncRNA
gene: LOC112611262
product: uncharacterized LOC112611262
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
transcript id: XR_003116619.1
SIO_010081: LOC112611262
subclass of: SO_0000673
so part of: LOC112611262
location: join(619858..620116,629426..631022)
location: region:619858-631022:1
so has part: feature:619858-620116:1:exon
so has part: feature:629426-631022:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:619858-620116:1:exon

position:620116:1
position: 620116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:629426-631022:1:exon

position:629426:1
position: 629426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112611706
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 674685..679102
location: region:674685-679102:1
so has part: feature:674685-679102:1:exon

112611706
type: Gene
SIO_000068: ncbigene

position:674685:1
position: 674685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:679102:1
position: 679102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674685-679102:1:exon

LOC112611706
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC112611706
subclass of: SO_0000673
so part of: LOC112611706
location: 674685..675440
location: region:674685-675440:1
so has part: feature:674685-675440:1:exon

position:675440:1
position: 675440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:674685-675440:1:exon

LOC112611706
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611706
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
pseudo: true
SIO_010081: LOC112611706
subclass of: SO_0000673
so part of: LOC112611706
location: 678937..679102
location: region:678937-679102:1
so has part: feature:678937-679102:1:exon

position:678937:1
position: 678937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:678937-679102:1:exon

CEP192
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: CEP192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(691802..832426)
location: region:691802-832426:-1
so has part: feature:691802-832426:-1:exon
subclass of: SO_0000010

112611597
type: Gene
SIO_000068: ncbigene

position:691802:-1
position: 691802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:832426:-1
position: 832426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691802-832426:-1:exon

CEP192
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: CEP192
product: centrosomal protein 192
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 104 ESTs, 6 Proteins, and 77% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365559.1
SIO_010081: CEP192
subclass of: SO_0000673
so part of: CEP192
location: complement(join(691802..692218,699659..699717,700495..700621,702741..702862,703294..703413,710890..710985,712385..712464,715469..715676,716737..716842,718381..718504,719006..719184,722343..722493,725908..726017,727823..727938,728194..728454,743641..743817,743976..744066,745653..745826,747290..747408,747971..748063,748161..748300,748738..748801,748924..749067,749205..749330,758211..758441,759883..760031,760924..761842,764527..764695,768078..768204,768288..769113,774803..774933,776179..776305,778939..779148,780213..780277,786533..786676,787138..787477,799353..799477,806437..806572,807707..807855,809578..809698,812039..812091,817348..817523,824887..825012,826803..826970,832325..832426))
location: region:691802-832426:-1
so has part: feature:832325-832426:-1:exon
so has part: feature:826803-826970:-1:exon
so has part: feature:824887-825012:-1:exon
so has part: feature:817348-817523:-1:exon
so has part: feature:812039-812091:-1:exon
so has part: feature:809578-809698:-1:exon
so has part: feature:807707-807855:-1:exon
so has part: feature:806437-806572:-1:exon
so has part: feature:799353-799477:-1:exon
so has part: feature:787138-787477:-1:exon
so has part: feature:786533-786676:-1:exon
so has part: feature:780213-780277:-1:exon
so has part: feature:778939-779148:-1:exon
so has part: feature:776179-776305:-1:exon
so has part: feature:774803-774933:-1:exon
so has part: feature:768288-769113:-1:exon
so has part: feature:768078-768204:-1:exon
so has part: feature:764527-764695:-1:exon
so has part: feature:760924-761842:-1:exon
so has part: feature:759883-760031:-1:exon
so has part: feature:758211-758441:-1:exon
so has part: feature:749205-749330:-1:exon
so has part: feature:748924-749067:-1:exon
so has part: feature:748738-748801:-1:exon
so has part: feature:748161-748300:-1:exon
so has part: feature:747971-748063:-1:exon
so has part: feature:747290-747408:-1:exon
so has part: feature:745653-745826:-1:exon
so has part: feature:743976-744066:-1:exon
so has part: feature:743641-743817:-1:exon
so has part: feature:728194-728454:-1:exon
so has part: feature:727823-727938:-1:exon
so has part: feature:725908-726017:-1:exon
so has part: feature:722343-722493:-1:exon
so has part: feature:719006-719184:-1:exon
so has part: feature:718381-718504:-1:exon
so has part: feature:716737-716842:-1:exon
so has part: feature:715469-715676:-1:exon
so has part: feature:712385-712464:-1:exon
so has part: feature:710890-710985:-1:exon
so has part: feature:703294-703413:-1:exon
so has part: feature:702741-702862:-1:exon
so has part: feature:700495-700621:-1:exon
so has part: feature:699659-699717:-1:exon
so has part: feature:691802-692218:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:832325-832426:-1:exon

position:832325:-1
position: 832325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:826803-826970:-1:exon

position:826803:-1
position: 826803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826970:-1
position: 826970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:824887-825012:-1:exon

position:824887:-1
position: 824887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:825012:-1
position: 825012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:817348-817523:-1:exon

position:817348:-1
position: 817348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:817523:-1
position: 817523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:812039-812091:-1:exon

position:812039:-1
position: 812039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:812091:-1
position: 812091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:809578-809698:-1:exon

position:809578:-1
position: 809578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:809698:-1
position: 809698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:807707-807855:-1:exon

position:807707:-1
position: 807707
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807855:-1
position: 807855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:806437-806572:-1:exon

position:806437:-1
position: 806437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:806572:-1
position: 806572
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:799353-799477:-1:exon

position:799353:-1
position: 799353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799477:-1
position: 799477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:787138-787477:-1:exon

position:787138:-1
position: 787138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:787477:-1
position: 787477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:786533-786676:-1:exon

position:786533:-1
position: 786533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:786676:-1
position: 786676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:780213-780277:-1:exon

position:780213:-1
position: 780213
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:780277:-1
position: 780277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:778939-779148:-1:exon

position:778939:-1
position: 778939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:779148:-1
position: 779148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:776179-776305:-1:exon

position:776179:-1
position: 776179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:776305:-1
position: 776305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:774803-774933:-1:exon

position:774803:-1
position: 774803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:774933:-1
position: 774933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:768288-769113:-1:exon

position:768288:-1
position: 768288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:769113:-1
position: 769113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:768078-768204:-1:exon

position:768078:-1
position: 768078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:768204:-1
position: 768204
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:764527-764695:-1:exon

position:764527:-1
position: 764527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:764695:-1
position: 764695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:760924-761842:-1:exon

position:760924:-1
position: 760924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:761842:-1
position: 761842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:759883-760031:-1:exon

position:759883:-1
position: 759883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760031:-1
position: 760031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:758211-758441:-1:exon

position:758211:-1
position: 758211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758441:-1
position: 758441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:749205-749330:-1:exon

position:749205:-1
position: 749205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749330:-1
position: 749330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:748924-749067:-1:exon

position:748924:-1
position: 748924
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749067:-1
position: 749067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:748738-748801:-1:exon

position:748738:-1
position: 748738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748801:-1
position: 748801
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:748161-748300:-1:exon

position:748161:-1
position: 748161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748300:-1
position: 748300
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:747971-748063:-1:exon

position:747971:-1
position: 747971
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:748063:-1
position: 748063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:747290-747408:-1:exon

position:747290:-1
position: 747290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:747408:-1
position: 747408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:745653-745826:-1:exon

position:745653:-1
position: 745653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745826:-1
position: 745826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:743976-744066:-1:exon

position:743976:-1
position: 743976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744066:-1
position: 744066
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:743641-743817:-1:exon

position:743641:-1
position: 743641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743817:-1
position: 743817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:728194-728454:-1:exon

position:728194:-1
position: 728194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:728454:-1
position: 728454
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:727823-727938:-1:exon

position:727823:-1
position: 727823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727938:-1
position: 727938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:725908-726017:-1:exon

position:725908:-1
position: 725908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726017:-1
position: 726017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:722343-722493:-1:exon

position:722343:-1
position: 722343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722493:-1
position: 722493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:719006-719184:-1:exon

position:719006:-1
position: 719006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:719184:-1
position: 719184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:718381-718504:-1:exon

position:718381:-1
position: 718381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:718504:-1
position: 718504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:716737-716842:-1:exon

position:716737:-1
position: 716737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:716842:-1
position: 716842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:715469-715676:-1:exon

position:715469:-1
position: 715469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:715676:-1
position: 715676
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:712385-712464:-1:exon

position:712385:-1
position: 712385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:712464:-1
position: 712464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:710890-710985:-1:exon

position:710890:-1
position: 710890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710985:-1
position: 710985
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:703294-703413:-1:exon

position:703294:-1
position: 703294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:703413:-1
position: 703413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:702741-702862:-1:exon

position:702741:-1
position: 702741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:702862:-1
position: 702862
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:700495-700621:-1:exon

position:700495:-1
position: 700495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:700621:-1
position: 700621
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:699659-699717:-1:exon

position:699659:-1
position: 699659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:699717:-1
position: 699717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:691802-692218:-1:exon

position:692218:-1
position: 692218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CEP192
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: CEP192
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 192 kDa
translation: MEDFRGIAEESFPSFLTNSLFGNSGILENVTLSSNLGLPVAVSTLARNRSSTDNRYPDVQSSYLVEERFSVPSGSSPRSQSDAEPRGRLQLSFQDGDSISRKKSYVESQHLSNALSKQSAFQMETAGPEEEPAGATESLQDQDLFNRASPLERAQDSPIDFHLQSWMNDKEPKIVVLDAGKHFEDKTLNSDLSHTSLLENEKLVLPTSLEDSSDDDIDDEMFYDDHLEAYFEQLAIPGMIYEDLEGPEPPEKGFKLPTNDLSQANENGSLNCKFQSENNSSLISLDSHSSETTHKESEESQLFCLPGTSNSVGAGGSRRHTGGLLPFSSGTWGIEKEIENVKGIVPDLSSESTSKDVLVKTLRATDLKLNSDNFHDANASRGGFDPTDPVKQGVECPHQNKTVLHMDGCLDTETPTVSIQEDVDVASLKPISDSGINFSDALWSPTCERRTCECHESIEKNKDETDLPQSVVYQNEEGRWVTDLAYYTSFNSKQNLNMSLSDEMNEDFRSGSEAFDLIAQDEEEFNKEHQFIQEENIDARNASVALGDMSWGATINHSLLRKSHSTSDLDKDDASYLRLSLGEFFAQRSEALGCLGGGNNVKRPSFGYFIRSPEKTEPIALIRKSDVSRGDLEKEMAHLNHDLYSGDLNEQSQAQLSEGSITLQVEAVESTSQVDENDVTLMADKGKTEDTFFMSNTPQRYKDKLPDSGDSVLRISTIASAIAEASVNTDPSQLAAMIKALSNKTRDKTFQEDEKQKDCSHVCHFLPYDLEKSNGSNVFDMEKYLKKTEVSRYESALENFSRTGMSDTWDLSLPKEQITQDIHTVDLSATSVSVREPEENTAAIVYVENGGSESQESSRTVNSSNSVTNVRENSSAVVDVKTRSIDNKLQGVGNNEKTTSVSTPSDSYSSVRNSRITSLCLLKECEEIRDSRENQRQNECVSEISNSEKHVTFKNHCIVSPKNSDLKNLSPEHGGRGSEDEQESFRPSTSPLSHSSPSEISGTSSSGCALESFGSAAQQQPPCKQELSPLACSPAGVSRLTYVSEPESSCPATTTDDALEDRKSDITSELSTTIIQGSPAALEERAMEKLREKVPFQNRGKGTLSSIIQNNSDTRKATETTSLSSKAESLKPDFKWSKDPSSKSGNLLETNEVGLTSNPEEVDLIRLALLGKSGLSCQVGSATSRPVSCQEPVDEDQRIISKDKSTAGREFGGQVSHQTTSENQCTPVASSTVRGSVADMQNVPAAVHALLAQPSLSTAPFAQRYLGTLPSAGSTTLPQCHAGSATVCGFSGGLPYPAVAGEPMQSSLAVGICLGSNIGSGWTGSSSLCNPYSNTLNQNLLSTTKPFPVPSVGTNCGIEPWDSGMTSGLGSVRVPEELKLPHACCVGIASQTLLSVLNPTDRWLQVSIGVLSISVNGEKVDLSTYRCLVFKNKAIIRPHTTEEIKVLFIPSSPGVFRCTFSVASWPCSTDAETIVQAEALASTVTLTAIAESPVIEVETEKKDVLDFGDLTYGGWKALPLKLINRTHATVPIRLIINANAVAWRCFMFSKEPVRAPVEAAPCTDVVTRLAGPSVVNHMMPASYDGQDPEFLMIWVLFHSPKKQISSSEVLDSAEEFFAKVDIEVDSPNPTPVLRSVSLRARAGIARIHAPRDLQTMHFLAKVASSTKQHLPLKNAGNIEVYLDIKVPEQGSHFSVDPKNLFLKPGEEHEVIVSFTPKDPEACEERMLKILVQPFGPQYEVMLKGEVISSGSKPLSPGPCLDIPSILSNKQFLAWGGVPLGRTQLQKLALRNNSASTTQHLRLLVRGQDQDCFQLQNTFGSEQRLTSNCEIRIHPKEDIIISVLFAPTRLSCMLARLEIKQLGNRSQPGVKFTIPLSGYGGTSNLILEGVKKLSDSYMVTVNGLVPGKESKIVFSVRNTGSRAAFVKAVGFKDSQKKILLDPKVLRIFPDKFVLKERTQEDVTLIYNPSDRGINNKTATELSTVYLFGGDEISRQQYRRAL…
SIO_010081: CEP192
subclass of: SO_0000673
so part of: CEP192
location: complement(join(692080..692218,699659..699717,700495..700621,702741..702862,703294..703413,710890..710985,712385..712464,715469..715676,716737..716842,718381..718504,719006..719184,722343..722493,725908..726017,727823..727938,728194..728454,743641..743817,743976..744066,745653..745826,747290..747408,747971..748063,748161..748300,748738..748801,748924..749067,749205..749330,758211..758441,759883..760031,760924..761842,764527..764695,768078..768204,768288..769113,774803..774933,776179..776305,778939..779148,780213..780277,786533..786676,787138..787477,799353..799477,806437..806572,807707..807855,809578..809698,812039..812091,817348..817523,824887..825012,826803..826966))
location: region:692080-826966:-1
so has part: feature:826803-826966:-1:exon
so has part: feature:824887-825012:-1:exon
so has part: feature:817348-817523:-1:exon
so has part: feature:812039-812091:-1:exon
so has part: feature:809578-809698:-1:exon
so has part: feature:807707-807855:-1:exon
so has part: feature:806437-806572:-1:exon
so has part: feature:799353-799477:-1:exon
so has part: feature:787138-787477:-1:exon
so has part: feature:786533-786676:-1:exon
so has part: feature:780213-780277:-1:exon
so has part: feature:778939-779148:-1:exon
so has part: feature:776179-776305:-1:exon
so has part: feature:774803-774933:-1:exon
so has part: feature:768288-769113:-1:exon
so has part: feature:768078-768204:-1:exon
so has part: feature:764527-764695:-1:exon
so has part: feature:760924-761842:-1:exon
so has part: feature:759883-760031:-1:exon
so has part: feature:758211-758441:-1:exon
so has part: feature:749205-749330:-1:exon
so has part: feature:748924-749067:-1:exon
so has part: feature:748738-748801:-1:exon
so has part: feature:748161-748300:-1:exon
so has part: feature:747971-748063:-1:exon
so has part: feature:747290-747408:-1:exon
so has part: feature:745653-745826:-1:exon
so has part: feature:743976-744066:-1:exon
so has part: feature:743641-743817:-1:exon
so has part: feature:728194-728454:-1:exon
so has part: feature:727823-727938:-1:exon
so has part: feature:725908-726017:-1:exon
so has part: feature:722343-722493:-1:exon
so has part: feature:719006-719184:-1:exon
so has part: feature:718381-718504:-1:exon
so has part: feature:716737-716842:-1:exon
so has part: feature:715469-715676:-1:exon
so has part: feature:712385-712464:-1:exon
so has part: feature:710890-710985:-1:exon
so has part: feature:703294-703413:-1:exon
so has part: feature:702741-702862:-1:exon
so has part: feature:700495-700621:-1:exon
so has part: feature:699659-699717:-1:exon
so has part: feature:692080-692218:-1:exon

XP_025221344.1
type: Protein
SIO_000068: ncbiprotein

position:692080:-1
position: 692080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:826966:-1
position: 826966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:826803-826966:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:824887-825012:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:817348-817523:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:812039-812091:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:809578-809698:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:807707-807855:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:806437-806572:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:799353-799477:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:787138-787477:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:786533-786676:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:780213-780277:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:778939-779148:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:776179-776305:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:774803-774933:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:768288-769113:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:768078-768204:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:764527-764695:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:760924-761842:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:759883-760031:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:758211-758441:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:749205-749330:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:748924-749067:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:748738-748801:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:748161-748300:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:747971-748063:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:747290-747408:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:745653-745826:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:743976-744066:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:743641-743817:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:728194-728454:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:727823-727938:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:725908-726017:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:722343-722493:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:719006-719184:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:718381-718504:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:716737-716842:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:715469-715676:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:712385-712464:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:710890-710985:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:703294-703413:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:702741-702862:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:700495-700621:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:699659-699717:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:692080-692218:-1:exon

SEH1L
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: SEH1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(836582..875711)
location: region:836582-875711:-1
so has part: feature:836582-875711:-1:exon
subclass of: SO_0000010

112611549
type: Gene
SIO_000068: ncbigene

position:836582:-1
position: 836582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875711:-1
position: 875711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:836582-875711:-1:exon

SEH1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: SEH1L
product: SEH1 like nucleoporin, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 139 ESTs, 10 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365486.1
SIO_010081: SEH1L
subclass of: SO_0000673
so part of: SEH1L
location: complement(join(836582..837255,839928..840078,841442..841599,842729..842869,851853..851951,859386..859597,867911..868057,871850..871900,875466..875711))
location: region:836582-875711:-1
so has part: feature:875466-875711:-1:exon
so has part: feature:871850-871900:-1:exon
so has part: feature:867911-868057:-1:exon
so has part: feature:859386-859597:-1:exon
so has part: feature:851853-851951:-1:exon
so has part: feature:842729-842869:-1:exon
so has part: feature:841442-841599:-1:exon
so has part: feature:839928-840078:-1:exon
so has part: feature:836582-837255:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875466-875711:-1:exon

position:875466:-1
position: 875466
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:871850-871900:-1:exon

position:871850:-1
position: 871850
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:871900:-1
position: 871900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:867911-868057:-1:exon

position:867911:-1
position: 867911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:868057:-1
position: 868057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:859386-859597:-1:exon

position:859386:-1
position: 859386
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:859597:-1
position: 859597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:851853-851951:-1:exon

position:851853:-1
position: 851853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:851951:-1
position: 851951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:842729-842869:-1:exon

position:842729:-1
position: 842729
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:842869:-1
position: 842869
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:841442-841599:-1:exon

position:841442:-1
position: 841442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:841599:-1
position: 841599
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:839928-840078:-1:exon

position:839928:-1
position: 839928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:840078:-1
position: 840078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:836582-837255:-1:exon

position:837255:-1
position: 837255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEH1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: SEH1L
product: SEH1 like nucleoporin, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 258 ESTs, 8 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365487.1
SIO_010081: SEH1L
subclass of: SO_0000673
so part of: SEH1L
location: complement(join(836582..838878,839928..840078,841442..841599,842729..842869,851853..851951,859386..859597,867911..868057,871850..871900,875466..875711))
location: region:836582-875711:-1
so has part: feature:875466-875711:-1:exon
so has part: feature:871850-871900:-1:exon
so has part: feature:867911-868057:-1:exon
so has part: feature:859386-859597:-1:exon
so has part: feature:851853-851951:-1:exon
so has part: feature:842729-842869:-1:exon
so has part: feature:841442-841599:-1:exon
so has part: feature:839928-840078:-1:exon
so has part: feature:836582-838878:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:875466-875711:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871850-871900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867911-868057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859386-859597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851853-851951:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:842729-842869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841442-841599:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:839928-840078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:836582-838878:-1:exon

position:838878:-1
position: 838878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SEH1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: SEH1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin SEH1 isoform X1
translation: MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSLGSNIPSLQNSLNGSSAGRYFFPPLDSPRAGSRWSSYAQLLPPPPPPLVEHSCDADTANLQYPHPRRRYLSRPLNPLPENEGV
SIO_010081: SEH1L
subclass of: SO_0000673
so part of: SEH1L
location: complement(join(837060..837255,839928..840078,841442..841599,842729..842869,851853..851951,859386..859597,867911..868057,871850..871900,875466..875576))
location: region:837060-875576:-1
so has part: feature:875466-875576:-1:exon
so has part: feature:871850-871900:-1:exon
so has part: feature:867911-868057:-1:exon
so has part: feature:859386-859597:-1:exon
so has part: feature:851853-851951:-1:exon
so has part: feature:842729-842869:-1:exon
so has part: feature:841442-841599:-1:exon
so has part: feature:839928-840078:-1:exon
so has part: feature:837060-837255:-1:exon

XP_025221271.1
type: Protein
SIO_000068: ncbiprotein

position:837060:-1
position: 837060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:875576:-1
position: 875576
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875466-875576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871850-871900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867911-868057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859386-859597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851853-851951:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:842729-842869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841442-841599:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:839928-840078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:837060-837255:-1:exon

SEH1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: SEH1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nucleoporin SEH1 isoform X2
translation: MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAIATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNSNPSLGSNIPSLQNSLNGSSAGRKHS
SIO_010081: SEH1L
subclass of: SO_0000673
so part of: SEH1L
location: complement(join(838866..838878,839928..840078,841442..841599,842729..842869,851853..851951,859386..859597,867911..868057,871850..871900,875466..875576))
location: region:838866-875576:-1
so has part: feature:875466-875576:-1:exon
so has part: feature:871850-871900:-1:exon
so has part: feature:867911-868057:-1:exon
so has part: feature:859386-859597:-1:exon
so has part: feature:851853-851951:-1:exon
so has part: feature:842729-842869:-1:exon
so has part: feature:841442-841599:-1:exon
so has part: feature:839928-840078:-1:exon
so has part: feature:838866-838878:-1:exon

XP_025221272.1
type: Protein
SIO_000068: ncbiprotein

position:838866:-1
position: 838866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:875466-875576:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:871850-871900:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:867911-868057:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:859386-859597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:851853-851951:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:842729-842869:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:841442-841599:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:839928-840078:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:838866-838878:-1:exon

LOC112611550
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 844128..845055
location: region:844128-845055:1
so has part: feature:844128-845055:1:exon
subclass of: SO_0000010

112611550
type: Gene
SIO_000068: ncbigene

position:844128:1
position: 844128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:845055:1
position: 845055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844128-845055:1:exon

LOC112611550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LOC112611550
product: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365491.1
SIO_010081: LOC112611550
subclass of: SO_0000673
so part of: LOC112611550
location: join(844128..844204,844621..844680,844845..845055)
location: region:844128-845055:1
so has part: feature:844128-844204:1:exon
so has part: feature:844621-844680:1:exon
so has part: feature:844845-845055:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:844128-844204:1:exon

position:844204:1
position: 844204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:844621-844680:1:exon

position:844621:1
position: 844621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:844680:1
position: 844680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:844845-845055:1:exon

position:844845:1
position: 844845
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112611550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LOC112611550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112611550 isoform X3
translation: MAALLLRRVRCHYLQAHFGPQLCIRNWSLPVVMSIGRRGTGIAFSADVGPRKRPQDSPRIPVWSGCPGSYCVVLYGAGSHVKNGGSQHHLPTRYIHPSFCLSFLSPAWEKFSLFV
SIO_010081: LOC112611550
subclass of: SO_0000673
so part of: LOC112611550
location: join(844128..844204,844621..844680,844845..845055)
location: region:844128-845055:1
so has part: feature:844128-844204:1:exon
so has part: feature:844621-844680:1:exon
so has part: feature:844845-845055:1:exon

XP_025221276.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:844128-844204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844621-844680:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:844845-845055:1:exon

LOC112611550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LOC112611550
product: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365489.1
SIO_010081: LOC112611550
subclass of: SO_0000673
so part of: LOC112611550
location: join(844128..844204,844621..844975)
location: region:844128-844975:1
so has part: feature:844128-844204:1:exon
so has part: feature:844621-844975:1:exon

position:844975:1
position: 844975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844128-844204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844621-844975:1:exon

LOC112611550
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LOC112611550
product: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365490.1
SIO_010081: LOC112611550
subclass of: SO_0000673
so part of: LOC112611550
location: join(844128..844204,844624..844975)
location: region:844128-844975:1
so has part: feature:844128-844204:1:exon
so has part: feature:844624-844975:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:844128-844204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844624-844975:1:exon

position:844624:1
position: 844624
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112611550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LOC112611550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform X1
translation: MAALLLRRVRCHYLQAHFGPQLCIRNWSLPVVMSIGRRGTGIAFSAGVSLFGTSALLLPGNFESYLELVKSLCLGPALIHTAKSALVFPLTYHTWNGIRHLMWDLGKGLKIPHVYQSGVAALVLTVLSSMGLAAM
SIO_010081: LOC112611550
subclass of: SO_0000673
so part of: LOC112611550
location: join(844128..844204,844621..844951)
location: region:844128-844951:1
so has part: feature:844128-844204:1:exon
so has part: feature:844621-844951:1:exon

XP_025221274.1
type: Protein
SIO_000068: ncbiprotein

position:844951:1
position: 844951
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844128-844204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844621-844951:1:exon

LOC112611550
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LOC112611550
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like isoform X2
translation: MAALLLRRVRCHYLQAHFGPQLCIRKSLPVVMSIGRRGTGIAFSAGVSLFGTSALLLPGNFESYLELVKSLCLGPALIHTAKSALVFPLTYHTWNGIRHLMWDLGKGLKIPHVYQSGVAALVLTVLSSMGLAAM
SIO_010081: LOC112611550
subclass of: SO_0000673
so part of: LOC112611550
location: join(844128..844204,844624..844951)
location: region:844128-844951:1
so has part: feature:844128-844204:1:exon
so has part: feature:844624-844951:1:exon

XP_025221275.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:844128-844204:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:844624-844951:1:exon

PTPN2
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: PTPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 929453..1027200
location: region:929453-1027200:1
so has part: feature:929453-1027200:1:exon
subclass of: SO_0000010

112611533
type: Gene
SIO_000068: ncbigene

position:929453:1
position: 929453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1027200:1
position: 1027200
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929453-1027200:1:exon

PTPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPN2
product: protein tyrosine phosphatase, non-receptor type 2, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 93 ESTs, 5 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365466.1
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929453..929734,954808..954898,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1026834..1027200)
location: region:929453-1027200:1
so has part: feature:929453-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1026834-1027200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:929453-929734:1:exon

position:929734:1
position: 929734
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

position:954808:1
position: 954808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:954898:1
position: 954898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

position:976649:1
position: 976649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:976749:1
position: 976749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

position:982552:1
position: 982552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:982650:1
position: 982650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

position:988093:1
position: 988093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:988227:1
position: 988227
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:997074-997283:1:exon

position:997074:1
position: 997074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:997283:1
position: 997283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:998352-998504:1:exon

position:998352:1
position: 998352
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:998504:1
position: 998504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1009859-1010040:1:exon

position:1009859:1
position: 1009859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1010040:1
position: 1010040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1026834-1027200:1:exon

position:1026834:1
position: 1026834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PTPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPN2
product: protein tyrosine phosphatase, non-receptor type 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 126 ESTs, 1 Protein, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365464.1
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929458..929734,954808..954898,976649..976749,982552..982650,988093..988227,995146..995214,997074..997283,998352..998504,1009859..1010040,1017613..1017714,1026834..1027200)
location: region:929458-1027200:1
so has part: feature:929458-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:995146-995214:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1017714:1:exon
so has part: feature:1026834-1027200:1:exon

position:929458:1
position: 929458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929458-929734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995146-995214:1:exon

position:995146:1
position: 995146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:995214:1
position: 995214
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1017613-1017714:1:exon

position:1017613:1
position: 1017613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017714:1
position: 1017714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1026834-1027200:1:exon

PTPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPN2
product: protein tyrosine phosphatase, non-receptor type 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 168 ESTs, 6 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365465.1
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929458..929734,954808..954898,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1017613..1017714,1026834..1027200)
location: region:929458-1027200:1
so has part: feature:929458-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1017714:1:exon
so has part: feature:1026834-1027200:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:929458-929734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017613-1017714:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1026834-1027200:1:exon

PTPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPN2
product: protein tyrosine phosphatase, non-receptor type 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 115 ESTs, 9 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365463.1
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929458..929734,954808..954898,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1017613..1018847)
location: region:929458-1018847:1
so has part: feature:929458-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1018847:1:exon

position:1018847:1
position: 1018847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929458-929734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017613-1018847:1:exon

PTPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 2 isoform X2
translation: MPTTIEREFEELDTQRRWQSLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINYIENLWITLYLKLLMLDVKRSLKSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLPSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRPRLTDT
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929666..929734,954808..954898,976649..976749,982552..982650,988093..988227,995146..995214,997074..997283,998352..998504,1009859..1010040,1017613..1017714,1026834..1026855)
location: region:929666-1026855:1
so has part: feature:929666-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:995146-995214:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1017714:1:exon
so has part: feature:1026834-1026855:1:exon

XP_025221249.1
type: Protein
SIO_000068: ncbiprotein

position:929666:1
position: 929666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1026855:1
position: 1026855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929666-929734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:995146-995214:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1017613-1017714:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1026834-1026855:1:exon

PTPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 2 isoform X3
translation: MPTTIEREFEELDTQRRWQSLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLPSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRPRLTDT
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929666..929734,954808..954898,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1017613..1017714,1026834..1026855)
location: region:929666-1026855:1
so has part: feature:929666-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1017714:1:exon
so has part: feature:1026834-1026855:1:exon

XP_025221250.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:929666-929734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017613-1017714:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1026834-1026855:1:exon

PTPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 2 isoform X4
translation: MPTTIEREFEELDTQRRWQSLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLPSKMQDTMEENSERPRLTDT
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929666..929734,954808..954898,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1026834..1026855)
location: region:929666-1026855:1
so has part: feature:929666-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1026834-1026855:1:exon

XP_025221251.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:929666-929734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1026834-1026855:1:exon

PTPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 2 isoform X1
translation: MPTTIEREFEELDTQRRWQSLYLEIRNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLPSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFVSVILVGAFVGWTLFFQQNAL
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(929666..929734,954808..954898,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1017613..1017820)
location: region:929666-1017820:1
so has part: feature:929666-929734:1:exon
so has part: feature:954808-954898:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1017820:1:exon

XP_025221248.1
type: Protein
SIO_000068: ncbiprotein

position:1017820:1
position: 1017820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:929666-929734:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:954808-954898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1017613-1017820:1:exon

PTPN2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPN2
product: protein tyrosine phosphatase, non-receptor type 2, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 ESTs, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365467.1
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(972777..972831,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1017613..1018847)
location: region:972777-1018847:1
so has part: feature:972777-972831:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1018847:1:exon

position:972777:1
position: 972777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972777-972831:1:exon

position:972831:1
position: 972831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1017613-1018847:1:exon

PTPN2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPN2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein phosphatase non-receptor type 2 isoform X5
translation: MDQGDRECRTQEMYDHSRVKLQNAENDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYRMGLIQTPDQLRFSYMAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKYNGNRIGLEEEKLTGDRCTGLPSKMQDTMEENSESALRKRIREDRKATTAQKVQQMKQRLNENERKRKRWLYWQPILTKMGFVSVILVGAFVGWTLFFQQNAL
SIO_010081: PTPN2
subclass of: SO_0000673
so part of: PTPN2
location: join(972792..972831,976649..976749,982552..982650,988093..988227,997074..997283,998352..998504,1009859..1010040,1017613..1017820)
location: region:972792-1017820:1
so has part: feature:972792-972831:1:exon
so has part: feature:976649-976749:1:exon
so has part: feature:982552-982650:1:exon
so has part: feature:988093-988227:1:exon
so has part: feature:997074-997283:1:exon
so has part: feature:998352-998504:1:exon
so has part: feature:1009859-1010040:1:exon
so has part: feature:1017613-1017820:1:exon

XP_025221252.1
type: Protein
SIO_000068: ncbiprotein

position:972792:1
position: 972792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:972792-972831:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976649-976749:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:982552-982650:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:988093-988227:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:997074-997283:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:998352-998504:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1009859-1010040:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1017613-1017820:1:exon

PSMG2
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: PSMG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1085820..1109207)
location: region:1085820-1109207:-1
so has part: feature:1085820-1109207:-1:exon
subclass of: SO_0000010

112611308
type: Gene
SIO_000068: ncbigene

position:1085820:-1
position: 1085820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1109207:-1
position: 1109207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1085820-1109207:-1:exon

PSMG2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PSMG2
product: proteasome assembly chaperone 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 76 ESTs, 7 Proteins, and 73% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365015.1
SIO_010081: PSMG2
subclass of: SO_0000673
so part of: PSMG2
location: complement(join(1085820..1086125,1086942..1087062,1091008..1091181,1092995..1093113,1096634..1096692,1104904..1105075,1108714..1109207))
location: region:1085820-1109207:-1
so has part: feature:1108714-1109207:-1:exon
so has part: feature:1104904-1105075:-1:exon
so has part: feature:1096634-1096692:-1:exon
so has part: feature:1092995-1093113:-1:exon
so has part: feature:1091008-1091181:-1:exon
so has part: feature:1086942-1087062:-1:exon
so has part: feature:1085820-1086125:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1108714-1109207:-1:exon

position:1108714:-1
position: 1108714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1104904-1105075:-1:exon

position:1104904:-1
position: 1104904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1105075:-1
position: 1105075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1096634-1096692:-1:exon

position:1096634:-1
position: 1096634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1096692:-1
position: 1096692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1092995-1093113:-1:exon

position:1092995:-1
position: 1092995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1093113:-1
position: 1093113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1091008-1091181:-1:exon

position:1091008:-1
position: 1091008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091181:-1
position: 1091181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1086942-1087062:-1:exon

position:1086942:-1
position: 1086942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087062:-1
position: 1087062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1085820-1086125:-1:exon

position:1086125:-1
position: 1086125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PSMG2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PSMG2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proteasome assembly chaperone 2
translation: MFVPCGESAPDLAGFTLLMPAVSVGNVGQLAMDLIISTLNMSKIGYFYTDCLVPMVGNNPYATAEGNSTELSINAEVYSLPSRKLVALQLRSIFIKYKSKPFCEKLLSWVKSSGCARVIVLSSSHSYQRNDLQLRSTPFRYLLTPSIQRSVQNKIKSLNWQEMEKSRCIPEIDDSEFCIRIPGGGITKTLYDESCSKEIQMAVLLKFVSEGDNIPDALGLAEYLNEWLQIIKPLSDDPTASTSRWKIPSSWRLLFGSGLPPALF
SIO_010081: PSMG2
subclass of: SO_0000673
so part of: PSMG2
location: complement(join(1086033..1086125,1086942..1087062,1091008..1091181,1092995..1093113,1096634..1096692,1104904..1105075,1108714..1108770))
location: region:1086033-1108770:-1
so has part: feature:1108714-1108770:-1:exon
so has part: feature:1104904-1105075:-1:exon
so has part: feature:1096634-1096692:-1:exon
so has part: feature:1092995-1093113:-1:exon
so has part: feature:1091008-1091181:-1:exon
so has part: feature:1086942-1087062:-1:exon
so has part: feature:1086033-1086125:-1:exon

XP_025220800.1
type: Protein
SIO_000068: ncbiprotein

position:1086033:-1
position: 1086033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1108770:-1
position: 1108770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1108714-1108770:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1104904-1105075:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1096634-1096692:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1092995-1093113:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1091008-1091181:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1086942-1087062:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1086033-1086125:-1:exon

CEP76
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: CEP76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1109119..1138155
location: region:1109119-1138155:1
so has part: feature:1109119-1138155:1:exon
subclass of: SO_0000010

112611307
type: Gene
SIO_000068: ncbigene

position:1109119:1
position: 1109119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1138155:1
position: 1138155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109119-1138155:1:exon

CEP76
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: CEP76
product: centrosomal protein 76, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 84 ESTs, 10 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365013.1
SIO_010081: CEP76
subclass of: SO_0000673
so part of: CEP76
location: join(1109119..1109410,1110785..1110940,1111974..1112049,1112679..1112903,1114415..1114600,1116461..1116558,1120638..1120766,1124922..1125110,1130107..1130273,1132372..1132705,1136029..1136246,1137283..1138155)
location: region:1109119-1138155:1
so has part: feature:1109119-1109410:1:exon
so has part: feature:1110785-1110940:1:exon
so has part: feature:1111974-1112049:1:exon
so has part: feature:1112679-1112903:1:exon
so has part: feature:1114415-1114600:1:exon
so has part: feature:1116461-1116558:1:exon
so has part: feature:1120638-1120766:1:exon
so has part: feature:1124922-1125110:1:exon
so has part: feature:1130107-1130273:1:exon
so has part: feature:1132372-1132705:1:exon
so has part: feature:1136029-1136246:1:exon
so has part: feature:1137283-1138155:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1109119-1109410:1:exon

position:1109410:1
position: 1109410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1110785-1110940:1:exon

position:1110785:1
position: 1110785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1110940:1
position: 1110940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1111974-1112049:1:exon

position:1111974:1
position: 1111974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112049:1
position: 1112049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1112679-1112903:1:exon

position:1112679:1
position: 1112679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1112903:1
position: 1112903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1114415-1114600:1:exon

position:1114415:1
position: 1114415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1114600:1
position: 1114600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1116461-1116558:1:exon

position:1116461:1
position: 1116461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1116558:1
position: 1116558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1120638-1120766:1:exon

position:1120638:1
position: 1120638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1120766:1
position: 1120766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1124922-1125110:1:exon

position:1124922:1
position: 1124922
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1125110:1
position: 1125110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1130107-1130273:1:exon

position:1130107:1
position: 1130107
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1130273:1
position: 1130273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1132372-1132705:1:exon

position:1132372:1
position: 1132372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1132705:1
position: 1132705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1136029-1136246:1:exon

position:1136029:1
position: 1136029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1136246:1
position: 1136246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1137283-1138155:1:exon

position:1137283:1
position: 1137283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CEP76
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: CEP76
product: centrosomal protein 76, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 54 ESTs, 4 Proteins, and 62% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365014.1
SIO_010081: CEP76
subclass of: SO_0000673
so part of: CEP76
location: join(1109119..1109410,1110785..1110940,1111974..1112049,1114415..1114600,1116461..1116558,1120638..1120766,1124922..1125110,1130107..1130273,1132372..1132705,1136029..1136246,1137283..1137905)
location: region:1109119-1137905:1
so has part: feature:1109119-1109410:1:exon
so has part: feature:1110785-1110940:1:exon
so has part: feature:1111974-1112049:1:exon
so has part: feature:1114415-1114600:1:exon
so has part: feature:1116461-1116558:1:exon
so has part: feature:1120638-1120766:1:exon
so has part: feature:1124922-1125110:1:exon
so has part: feature:1130107-1130273:1:exon
so has part: feature:1132372-1132705:1:exon
so has part: feature:1136029-1136246:1:exon
so has part: feature:1137283-1137905:1:exon

position:1137905:1
position: 1137905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109119-1109410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110785-1110940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111974-1112049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1114415-1114600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1116461-1116558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1120638-1120766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1124922-1125110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130107-1130273:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132372-1132705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136029-1136246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137283-1137905:1:exon

CEP76
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: CEP76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 76 kDa isoform X1
translation: MSLPPEKASELKQLIHQQLSKMDVHGRIREILAETIREELAPDQQHLSTEDLIKALRRRGIIDDVMKELNFVTGSVEQELPSSPKQPICFDRQSTLKKTNIDPTRRYLYLQVLGGKAFLEHLQEPEPLPGQVCSTFTLCLHYRNQRFRSKPVPCACEPDFHDGFLLEVHRESLGDGTRMADSTTMLSISDPIHMVLIKTDIFGETTLVASYFLEWRSVLGSENGVTSLTVELMGVGTESKVSVGILNIKLEMYPPLNQTLSQEVVNTQLALERQKTAEKERLFLVYAKQWWREYLQIRPSHNSRLVKIFAQDENGINRPVCSYVKPLRAGRLLDTPRQAARFVNVLGYERAPVIGGGGKQEQWCTLLAFLCRSKGDCEDHANLLCSLLLGYGLEAFVCVGTKAKGVPHAWVMTCGTDGTITFWESLTGHRYIHKPTNPDEPPVAEQPKPLYPYRTIGCVFNHQMFLGNCQPSDAVETCVFDLNDESKWKPMSEEAIKSVCAPGATTSLPPFPPLCASTIDASVTSNEIEMQLRLLVSEHRKDLGLTTVWEDQLSYLLSPALASYEFERTTSISAGNEEFQDAIRRAVPDGHTFKGFPIHFVYRNARRAFATCLRSPFCEEIICCRGDQVRLAVRVRVFTYPESACAVWIMFACKYRSVL
SIO_010081: CEP76
subclass of: SO_0000673
so part of: CEP76
location: join(1109348..1109410,1110785..1110940,1111974..1112049,1112679..1112903,1114415..1114600,1116461..1116558,1120638..1120766,1124922..1125110,1130107..1130273,1132372..1132705,1136029..1136246,1137283..1137421)
location: region:1109348-1137421:1
so has part: feature:1109348-1109410:1:exon
so has part: feature:1110785-1110940:1:exon
so has part: feature:1111974-1112049:1:exon
so has part: feature:1112679-1112903:1:exon
so has part: feature:1114415-1114600:1:exon
so has part: feature:1116461-1116558:1:exon
so has part: feature:1120638-1120766:1:exon
so has part: feature:1124922-1125110:1:exon
so has part: feature:1130107-1130273:1:exon
so has part: feature:1132372-1132705:1:exon
so has part: feature:1136029-1136246:1:exon
so has part: feature:1137283-1137421:1:exon

XP_025220798.1
type: Protein
SIO_000068: ncbiprotein

position:1109348:1
position: 1109348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1137421:1
position: 1137421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1109348-1109410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110785-1110940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111974-1112049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1112679-1112903:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1114415-1114600:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1116461-1116558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1120638-1120766:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1124922-1125110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1130107-1130273:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1132372-1132705:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1136029-1136246:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1137283-1137421:1:exon

CEP76
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: CEP76
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: centrosomal protein of 76 kDa isoform X2
translation: MSLPPEKASELKQLIHQQLSKMDVHGRIREILAETIREELAPDQQHLSTEDLIKALRRRGIIDDVMKELNFVTGSVEQELPSSPKQPICFDRQSTLKKSDGTRMADSTTMLSISDPIHMVLIKTDIFGETTLVASYFLEWRSVLGSENGVTSLTVELMGVGTESKVSVGILNIKLEMYPPLNQTLSQEVVNTQLALERQKTAEKERLFLVYAKQWWREYLQIRPSHNSRLVKIFAQDENGINRPVCSYVKPLRAGRLLDTPRQAARFVNVLGYERAPVIGGGGKQEQWCTLLAFLCRSKGDCEDHANLLCSLLLGYGLEAFVCVGTKAKGVPHAWVMTCGTDGTITFWESLTGHRYIHKPTNPDEPPVAEQPKPLYPYRTIGCVFNHQMFLGNCQPSDAVETCVFDLNDESKWKPMSEEAIKSVCAPGATTSLPPFPPLCASTIDASVTSNEIEMQLRLLVSEHRKDLGLTTVWEDQLSYLLSPALASYEFERTTSISAGNEEFQDAIRRAVPDGHTFKGFPIHFVYRNARRAFATCLRSPFCEEIICCRGDQVRLAVRVRVFTYPESACAVWIMFACKYRSVL
SIO_010081: CEP76
subclass of: SO_0000673
so part of: CEP76
location: join(1109348..1109410,1110785..1110940,1111974..1112049,1114415..1114600,1116461..1116558,1120638..1120766,1124922..1125110,1130107..1130273,1132372..1132705,1136029..1136246,1137283..1137421)
location: region:1109348-1137421:1
so has part: feature:1109348-1109410:1:exon
so has part: feature:1110785-1110940:1:exon
so has part: feature:1111974-1112049:1:exon
so has part: feature:1114415-1114600:1:exon
so has part: feature:1116461-1116558:1:exon
so has part: feature:1120638-1120766:1:exon
so has part: feature:1124922-1125110:1:exon
so has part: feature:1130107-1130273:1:exon
so has part: feature:1132372-1132705:1:exon
so has part: feature:1136029-1136246:1:exon
so has part: feature:1137283-1137421:1:exon

XP_025220799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1109348-1109410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1110785-1110940:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1111974-1112049:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1114415-1114600:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1116461-1116558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1120638-1120766:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1124922-1125110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1130107-1130273:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1132372-1132705:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1136029-1136246:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1137283-1137421:1:exon

SPIRE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: SPIRE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1152239..1340643
location: region:1152239-1340643:1
so has part: feature:1152239-1340643:1:exon
subclass of: SO_0000010

112611306
type: Gene
SIO_000068: ncbigene

position:1152239:1
position: 1152239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1340643:1
position: 1340643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152239-1340643:1:exon

SPIRE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: SPIRE1
product: spire type actin nucleation factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 275 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365010.1
SIO_010081: SPIRE1
subclass of: SO_0000673
so part of: SPIRE1
location: join(1152239..1152810,1174633..1174667,1247565..1247798,1259599..1259724,1279333..1279410,1288128..1288292,1296806..1296892,1298635..1298764,1305502..1305543,1311614..1311786,1321311..1321401,1322786..1322928,1331469..1331606,1332859..1332929,1333481..1333508,1333602..1333735,1337281..1340643)
location: region:1152239-1340643:1
so has part: feature:1152239-1152810:1:exon
so has part: feature:1174633-1174667:1:exon
so has part: feature:1247565-1247798:1:exon
so has part: feature:1259599-1259724:1:exon
so has part: feature:1279333-1279410:1:exon
so has part: feature:1288128-1288292:1:exon
so has part: feature:1296806-1296892:1:exon
so has part: feature:1298635-1298764:1:exon
so has part: feature:1305502-1305543:1:exon
so has part: feature:1311614-1311786:1:exon
so has part: feature:1321311-1321401:1:exon
so has part: feature:1322786-1322928:1:exon
so has part: feature:1331469-1331606:1:exon
so has part: feature:1332859-1332929:1:exon
so has part: feature:1333481-1333508:1:exon
so has part: feature:1333602-1333735:1:exon
so has part: feature:1337281-1340643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152239-1152810:1:exon

position:1152810:1
position: 1152810
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1174633-1174667:1:exon

position:1174633:1
position: 1174633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1174667:1
position: 1174667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1247565-1247798:1:exon

position:1247565:1
position: 1247565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1247798:1
position: 1247798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1259599-1259724:1:exon

position:1259599:1
position: 1259599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1259724:1
position: 1259724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1279333-1279410:1:exon

position:1279333:1
position: 1279333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1279410:1
position: 1279410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1288128-1288292:1:exon

position:1288128:1
position: 1288128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1288292:1
position: 1288292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1296806-1296892:1:exon

position:1296806:1
position: 1296806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1296892:1
position: 1296892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1298635-1298764:1:exon

position:1298635:1
position: 1298635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1298764:1
position: 1298764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1305502-1305543:1:exon

position:1305502:1
position: 1305502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1305543:1
position: 1305543
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1311614-1311786:1:exon

position:1311614:1
position: 1311614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1311786:1
position: 1311786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1321311-1321401:1:exon

position:1321311:1
position: 1321311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1321401:1
position: 1321401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1322786-1322928:1:exon

position:1322786:1
position: 1322786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1322928:1
position: 1322928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1331469-1331606:1:exon

position:1331469:1
position: 1331469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1331606:1
position: 1331606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1332859-1332929:1:exon

position:1332859:1
position: 1332859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1332929:1
position: 1332929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1333481-1333508:1:exon

position:1333481:1
position: 1333481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333508:1
position: 1333508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1333602-1333735:1:exon

position:1333602:1
position: 1333602
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1333735:1
position: 1333735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1337281-1340643:1:exon

position:1337281:1
position: 1337281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SPIRE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: SPIRE1
product: spire type actin nucleation factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 280 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365012.1
SIO_010081: SPIRE1
subclass of: SO_0000673
so part of: SPIRE1
location: join(1152239..1152810,1174633..1174667,1247565..1247798,1259599..1259724,1279333..1279410,1288128..1288292,1296806..1296892,1298635..1298764,1311614..1311786,1321311..1321401,1322786..1322928,1331469..1331606,1332859..1332929,1333481..1333508,1333602..1333735,1337281..1340643)
location: region:1152239-1340643:1
so has part: feature:1152239-1152810:1:exon
so has part: feature:1174633-1174667:1:exon
so has part: feature:1247565-1247798:1:exon
so has part: feature:1259599-1259724:1:exon
so has part: feature:1279333-1279410:1:exon
so has part: feature:1288128-1288292:1:exon
so has part: feature:1296806-1296892:1:exon
so has part: feature:1298635-1298764:1:exon
so has part: feature:1311614-1311786:1:exon
so has part: feature:1321311-1321401:1:exon
so has part: feature:1322786-1322928:1:exon
so has part: feature:1331469-1331606:1:exon
so has part: feature:1332859-1332929:1:exon
so has part: feature:1333481-1333508:1:exon
so has part: feature:1333602-1333735:1:exon
so has part: feature:1337281-1340643:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152239-1152810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174633-1174667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1247565-1247798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259599-1259724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279333-1279410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288128-1288292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1296806-1296892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298635-1298764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1311614-1311786:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1321311-1321401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322786-1322928:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1331469-1331606:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1332859-1332929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1333481-1333508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1333602-1333735:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1337281-1340643:1:exon

SPIRE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: SPIRE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 1 isoform X1
translation: MAQAAGPAGGGEPRAEAGGGEGPREPEAAGGAAGGSQDALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRRRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVSGKLGYSQCTETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDRMANTVEADGSNDEGYEAAEEGPEDEEDEKRKISAIRSYRDVMKLCAAHLPTESDAPNHYQAVCRALFAETMELHTFLTKIKSAKENLKKIQEMEKSDESSTDLEELKNADWARFWVQVMRDLRNGVKLKKVQERQYNPLPIEYQLTPYEMLMDDIRCKRYTLRKVMVNGDIPPRLKKSAHEIILDFIRSRPPLNPVSARKLKPTPPRPRSLHERILEEIKAERKLRPVSPEEIRRSRLAMRPLSMSHSFDLSDVTTPESTKNLMESSMVNGGLTSQTKENGLSTAQQVPAQRKKLLKAPTLAELDSSESEEETLHKSTSSSSVSPSFPEEPVLEAVSTRKKPPKFLPISSTPQPERRQPPQRRHSIEKETPTNVRQFLPPSRQSSRSLEEFCYPVECLALTVEEVMHIRQVLVKAELEKYQQYKDIYTALKKGKLCFCCRTRRFSFFTWSYTCQFCKRPVCSQCCKKMRLPSKPYSTLPIFSLGPSALQRGESMRSEKPSTTHHRPLRSIARFSSKSKSMDKSDEELQFPKELMEDWSTMEVCVDCKKFISEIISSSRRSLVLANKRARLKRKTQSFYMSPPGPSEYCPSERTISEI
SIO_010081: SPIRE1
subclass of: SO_0000673
so part of: SPIRE1
location: join(1152474..1152810,1174633..1174667,1247565..1247798,1259599..1259724,1279333..1279410,1288128..1288292,1296806..1296892,1298635..1298764,1305502..1305543,1311614..1311786,1321311..1321401,1322786..1322928,1331469..1331606,1332859..1332929,1333481..1333508,1333602..1333735,1337281..1337539)
location: region:1152474-1337539:1
so has part: feature:1152474-1152810:1:exon
so has part: feature:1174633-1174667:1:exon
so has part: feature:1247565-1247798:1:exon
so has part: feature:1259599-1259724:1:exon
so has part: feature:1279333-1279410:1:exon
so has part: feature:1288128-1288292:1:exon
so has part: feature:1296806-1296892:1:exon
so has part: feature:1298635-1298764:1:exon
so has part: feature:1305502-1305543:1:exon
so has part: feature:1311614-1311786:1:exon
so has part: feature:1321311-1321401:1:exon
so has part: feature:1322786-1322928:1:exon
so has part: feature:1331469-1331606:1:exon
so has part: feature:1332859-1332929:1:exon
so has part: feature:1333481-1333508:1:exon
so has part: feature:1333602-1333735:1:exon
so has part: feature:1337281-1337539:1:exon

XP_025220795.1
type: Protein
SIO_000068: ncbiprotein

position:1152474:1
position: 1152474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1337539:1
position: 1337539
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152474-1152810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174633-1174667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1247565-1247798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259599-1259724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279333-1279410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288128-1288292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1296806-1296892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298635-1298764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1305502-1305543:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1311614-1311786:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1321311-1321401:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1322786-1322928:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1331469-1331606:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1332859-1332929:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1333481-1333508:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1333602-1333735:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1337281-1337539:1:exon

SPIRE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: SPIRE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein spire homolog 1 isoform X2
translation: MAQAAGPAGGGEPRAEAGGGEGPREPEAAGGAAGGSQDALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRRRVRSAAQIRVWRDGAVTLAPAADDAGEPPPVSGKLGYSQCTETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDRMANTVEADGSNDEGYEAAEEGPEDEEDEKRKISAIRSYRDVMKLCAAHLPTESDAPNHYQAVCRALFAETMELHTFLTKIKSAKENLKKIQEMEKSDESSTDLEELKNADWARFWVQVMRDLRNGVKLKKVQERQYNPLPIEYQLTPYEMLMDDIRCKRYTLRKVMVNGDIPPRLKKSAHEIILDFIRSRPPLNPVSARKLKPTPPRPRSLHERILEEIKAERKLRPVSPEEIRRSRLDVTTPESTKNLMESSMVNGGLTSQTKENGLSTAQQVPAQRKKLLKAPTLAELDSSESEEETLHKSTSSSSVSPSFPEEPVLEAVSTRKKPPKFLPISSTPQPERRQPPQRRHSIEKETPTNVRQFLPPSRQSSRSLEEFCYPVECLALTVEEVMHIRQVLVKAELEKYQQYKDIYTALKKGKLCFCCRTRRFSFFTWSYTCQFCKRPVCSQCCKKMRLPSKPYSTLPIFSLGPSALQRGESMRSEKPSTTHHRPLRSIARFSSKSKSMDKSDEELQFPKELMEDWSTMEVCVDCKKFISEIISSSRRSLVLANKRARLKRKTQSFYMSPPGPSEYCPSERTISEI
SIO_010081: SPIRE1
subclass of: SO_0000673
so part of: SPIRE1
location: join(1152474..1152810,1174633..1174667,1247565..1247798,1259599..1259724,1279333..1279410,1288128..1288292,1296806..1296892,1298635..1298764,1311614..1311786,1321311..1321401,1322786..1322928,1331469..1331606,1332859..1332929,1333481..1333508,1333602..1333735,1337281..1337539)
location: region:1152474-1337539:1
so has part: feature:1152474-1152810:1:exon
so has part: feature:1174633-1174667:1:exon
so has part: feature:1247565-1247798:1:exon
so has part: feature:1259599-1259724:1:exon
so has part: feature:1279333-1279410:1:exon
so has part: feature:1288128-1288292:1:exon
so has part: feature:1296806-1296892:1:exon
so has part: feature:1298635-1298764:1:exon
so has part: feature:1311614-1311786:1:exon
so has part: feature:1321311-1321401:1:exon
so has part: feature:1322786-1322928:1:exon
so has part: feature:1331469-1331606:1:exon
so has part: feature:1332859-1332929:1:exon
so has part: feature:1333481-1333508:1:exon
so has part: feature:1333602-1333735:1:exon
so has part: feature:1337281-1337539:1:exon

XP_025220797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1152474-1152810:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1174633-1174667:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1247565-1247798:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1259599-1259724:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1279333-1279410:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1288128-1288292:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1296806-1296892:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1298635-1298764:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1311614-1311786:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1321311-1321401:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1322786-1322928:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1331469-1331606:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1332859-1332929:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1333481-1333508:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1333602-1333735:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1337281-1337539:1:exon

LOC112611767
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611767
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1261610..1261711
location: region:1261610-1261711:1
so has part: feature:1261610-1261711:1:exon
subclass of: SO_0000578

112611767
type: Gene
SIO_000068: ncbigene

position:1261610:1
position: 1261610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1261711:1
position: 1261711
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1261610-1261711:1:exon

LOC112611767
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: snoRNA
gene: LOC112611767
product: small nucleolar RNA U13
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003116742.1
SIO_010081: LOC112611767
subclass of: SO_0000673
so part of: LOC112611767
location: 1261610..1261711
location: region:1261610-1261711:1
so has part: feature:1261610-1261711:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1261610-1261711:1:exon

LOC112611309
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611309
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1335782..1336372)
location: region:1335782-1336372:-1
so has part: feature:1335782-1336372:-1:exon

112611309
type: Gene
SIO_000068: ncbigene

position:1335782:-1
position: 1335782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1336372:-1
position: 1336372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1335782-1336372:-1:exon

LOC112611309
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611309
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins
pseudo: true
SIO_010081: LOC112611309
subclass of: SO_0000673
so part of: LOC112611309
location: complement(1335782..1336372)
location: region:1335782-1336372:-1
so has part: feature:1335782-1336372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1335782-1336372:-1:exon

PRELID3A
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: PRELID3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1354551..1377757)
location: region:1354551-1377757:-1
so has part: feature:1354551-1377757:-1:exon
subclass of: SO_0000010

112611259
type: Gene
SIO_000068: ncbigene

position:1354551:-1
position: 1354551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377757:-1
position: 1377757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1354551-1377757:-1:exon

PRELID3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PRELID3A
product: PRELI domain containing 3A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 20 ESTs, 6 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364895.1
SIO_010081: PRELID3A
subclass of: SO_0000673
so part of: PRELID3A
location: complement(join(1354551..1355626,1356879..1356962,1358982..1359084,1359194..1359264,1363649..1363738,1364760..1364928,1377652..1377757))
location: region:1354551-1377757:-1
so has part: feature:1377652-1377757:-1:exon
so has part: feature:1364760-1364928:-1:exon
so has part: feature:1363649-1363738:-1:exon
so has part: feature:1359194-1359264:-1:exon
so has part: feature:1358982-1359084:-1:exon
so has part: feature:1356879-1356962:-1:exon
so has part: feature:1354551-1355626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377652-1377757:-1:exon

position:1377652:-1
position: 1377652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1364760-1364928:-1:exon

position:1364760:-1
position: 1364760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1364928:-1
position: 1364928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1363649-1363738:-1:exon

position:1363649:-1
position: 1363649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1363738:-1
position: 1363738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1359194-1359264:-1:exon

position:1359194:-1
position: 1359194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359264:-1
position: 1359264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1358982-1359084:-1:exon

position:1358982:-1
position: 1358982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1359084:-1
position: 1359084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1356879-1356962:-1:exon

position:1356879:-1
position: 1356879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1356962:-1
position: 1356962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1354551-1355626:-1:exon

position:1355626:-1
position: 1355626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRELID3A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PRELID3A
product: PRELI domain containing 3A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 22 ESTs, 6 Proteins, and 78% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364894.1
SIO_010081: PRELID3A
subclass of: SO_0000673
so part of: PRELID3A
location: complement(join(1354551..1355626,1356876..1356962,1358982..1359084,1359194..1359264,1363649..1363738,1364760..1364928,1377652..1377757))
location: region:1354551-1377757:-1
so has part: feature:1377652-1377757:-1:exon
so has part: feature:1364760-1364928:-1:exon
so has part: feature:1363649-1363738:-1:exon
so has part: feature:1359194-1359264:-1:exon
so has part: feature:1358982-1359084:-1:exon
so has part: feature:1356876-1356962:-1:exon
so has part: feature:1354551-1355626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1377652-1377757:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364760-1364928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363649-1363738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359194-1359264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358982-1359084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356876-1356962:-1:exon

position:1356876:-1
position: 1356876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1354551-1355626:-1:exon

PRELID3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PRELID3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain containing protein 3A
translation: MKIWSSEHVFGHPWDTVIQAAMRKYPNPMNPSVLGVDVLQRRVDGRGRLHSLRLLSTEWGLPGLVRAILGTSRTLTYIQEHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPHPENPEMTVLTQEAIITVKGISLGSYLESLMANTISSNAKKGWAAIEWIIEHSESAVS
SIO_010081: PRELID3A
subclass of: SO_0000673
so part of: PRELID3A
location: complement(join(1356909..1356962,1358982..1359084,1359194..1359264,1363649..1363738,1364760..1364928,1377652..1377683))
location: region:1356909-1377683:-1
so has part: feature:1377652-1377683:-1:exon
so has part: feature:1364760-1364928:-1:exon
so has part: feature:1363649-1363738:-1:exon
so has part: feature:1359194-1359264:-1:exon
so has part: feature:1358982-1359084:-1:exon
so has part: feature:1356909-1356962:-1:exon

XP_025220679.1
type: Protein
SIO_000068: ncbiprotein

position:1356909:-1
position: 1356909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1377683:-1
position: 1377683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1377652-1377683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364760-1364928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363649-1363738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359194-1359264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358982-1359084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356909-1356962:-1:exon

PRELID3A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PRELID3A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: PRELI domain containing protein 3A
translation: MKIWSSEHVFGHPWDTVIQAAMRKYPNPMNPSVLGVDVLQRRVDGRGRLHSLRLLSTEWGLPGLVRAILGTSRTLTYIQEHSVVDPVEKKMELCSTNITLTNLVSVNERLVYTPHPENPEMTVLTQEAIITVKGISLGSYLESLMANTISSNAKKGWAAIEWIIEHSESAVS
SIO_010081: PRELID3A
subclass of: SO_0000673
so part of: PRELID3A
location: complement(join(1356909..1356962,1358982..1359084,1359194..1359264,1363649..1363738,1364760..1364928,1377652..1377683))
location: region:1356909-1377683:-1
so has part: feature:1377652-1377683:-1:exon
so has part: feature:1364760-1364928:-1:exon
so has part: feature:1363649-1363738:-1:exon
so has part: feature:1359194-1359264:-1:exon
so has part: feature:1358982-1359084:-1:exon
so has part: feature:1356909-1356962:-1:exon

XP_025220680.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1377652-1377683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1364760-1364928:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1363649-1363738:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1359194-1359264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1358982-1359084:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1356909-1356962:-1:exon

LOC112611740
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611740
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1380501..1380562)
location: region:1380501-1380562:-1
so has part: feature:1380501-1380562:-1:exon
subclass of: SO_0000623

112611740
type: Gene
SIO_000068: ncbigene

position:1380501:-1
position: 1380501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1380562:-1
position: 1380562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1380501-1380562:-1:exon

LOC112611740
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: snRNA
gene: LOC112611740
product: U7 small nuclear RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003116721.1
SIO_010081: LOC112611740
subclass of: SO_0000673
so part of: LOC112611740
location: complement(1380501..1380562)
location: region:1380501-1380562:-1
so has part: feature:1380501-1380562:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1380501-1380562:-1:exon

AFG3L2
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: AFG3L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1397990..1450463
location: region:1397990-1450463:1
so has part: feature:1397990-1450463:1:exon
subclass of: SO_0000010

112611256
type: Gene
SIO_000068: ncbigene

position:1397990:1
position: 1397990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1450463:1
position: 1450463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397990-1450463:1:exon

AFG3L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: AFG3L2
product: AFG3 like matrix AAA peptidase subunit 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 256 ESTs, 1 Protein, and 94% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364878.1
SIO_010081: AFG3L2
subclass of: SO_0000673
so part of: AFG3L2
location: join(1397990..1398459,1404037..1404136,1404807..1404884,1408320..1408435,1408592..1408744,1411507..1411581,1415594..1415718,1416701..1416974,1419453..1419590,1423131..1423284,1426453..1426560,1426656..1426781,1429767..1429877,1433720..1433835,1438244..1438444,1440813..1441007,1449628..1450463)
location: region:1397990-1450463:1
so has part: feature:1397990-1398459:1:exon
so has part: feature:1404037-1404136:1:exon
so has part: feature:1404807-1404884:1:exon
so has part: feature:1408320-1408435:1:exon
so has part: feature:1408592-1408744:1:exon
so has part: feature:1411507-1411581:1:exon
so has part: feature:1415594-1415718:1:exon
so has part: feature:1416701-1416974:1:exon
so has part: feature:1419453-1419590:1:exon
so has part: feature:1423131-1423284:1:exon
so has part: feature:1426453-1426560:1:exon
so has part: feature:1426656-1426781:1:exon
so has part: feature:1429767-1429877:1:exon
so has part: feature:1433720-1433835:1:exon
so has part: feature:1438244-1438444:1:exon
so has part: feature:1440813-1441007:1:exon
so has part: feature:1449628-1450463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397990-1398459:1:exon

position:1398459:1
position: 1398459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1404037-1404136:1:exon

position:1404037:1
position: 1404037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404136:1
position: 1404136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1404807-1404884:1:exon

position:1404807:1
position: 1404807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1404884:1
position: 1404884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1408320-1408435:1:exon

position:1408320:1
position: 1408320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408435:1
position: 1408435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1408592-1408744:1:exon

position:1408592:1
position: 1408592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1408744:1
position: 1408744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1411507-1411581:1:exon

position:1411507:1
position: 1411507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1411581:1
position: 1411581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1415594-1415718:1:exon

position:1415594:1
position: 1415594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1415718:1
position: 1415718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1416701-1416974:1:exon

position:1416701:1
position: 1416701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1416974:1
position: 1416974
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1419453-1419590:1:exon

position:1419453:1
position: 1419453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1419590:1
position: 1419590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1423131-1423284:1:exon

position:1423131:1
position: 1423131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1423284:1
position: 1423284
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1426453-1426560:1:exon

position:1426453:1
position: 1426453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426560:1
position: 1426560
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1426656-1426781:1:exon

position:1426656:1
position: 1426656
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1426781:1
position: 1426781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1429767-1429877:1:exon

position:1429767:1
position: 1429767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1429877:1
position: 1429877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1433720-1433835:1:exon

position:1433720:1
position: 1433720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1433835:1
position: 1433835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1438244-1438444:1:exon

position:1438244:1
position: 1438244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1438444:1
position: 1438444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1440813-1441007:1:exon

position:1440813:1
position: 1440813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1441007:1
position: 1441007
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1449628-1450463:1:exon

position:1449628:1
position: 1449628
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

AFG3L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: AFG3L2
product: AFG3 like matrix AAA peptidase subunit 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 288 ESTs, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364879.1
SIO_010081: AFG3L2
subclass of: SO_0000673
so part of: AFG3L2
location: join(1397990..1398459,1404037..1404136,1404807..1404884,1408326..1408435,1408592..1408744,1411507..1411581,1415594..1415718,1416701..1416974,1419453..1419590,1423131..1423284,1426453..1426560,1426656..1426781,1429767..1429877,1433720..1433835,1438244..1438444,1440813..1441007,1449628..1450463)
location: region:1397990-1450463:1
so has part: feature:1397990-1398459:1:exon
so has part: feature:1404037-1404136:1:exon
so has part: feature:1404807-1404884:1:exon
so has part: feature:1408326-1408435:1:exon
so has part: feature:1408592-1408744:1:exon
so has part: feature:1411507-1411581:1:exon
so has part: feature:1415594-1415718:1:exon
so has part: feature:1416701-1416974:1:exon
so has part: feature:1419453-1419590:1:exon
so has part: feature:1423131-1423284:1:exon
so has part: feature:1426453-1426560:1:exon
so has part: feature:1426656-1426781:1:exon
so has part: feature:1429767-1429877:1:exon
so has part: feature:1433720-1433835:1:exon
so has part: feature:1438244-1438444:1:exon
so has part: feature:1440813-1441007:1:exon
so has part: feature:1449628-1450463:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1397990-1398459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404037-1404136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404807-1404884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408326-1408435:1:exon

position:1408326:1
position: 1408326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1408592-1408744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411507-1411581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415594-1415718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1416701-1416974:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419453-1419590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423131-1423284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1426453-1426560:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426656-1426781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1429767-1429877:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433720-1433835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438244-1438444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440813-1441007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1449628-1450463:1:exon

AFG3L2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: AFG3L2
product: AFG3 like matrix AAA peptidase subunit 2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 52 ESTs, 1 Protein, and 74% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364880.1
SIO_010081: AFG3L2
subclass of: SO_0000673
so part of: AFG3L2
location: join(1397990..1398459,1404037..1404136,1404807..1404884,1408320..1408435,1408592..1408744,1411507..1411581,1415594..1415718,1416701..1416974,1419453..1419590,1423131..1423284,1426453..1426560,1426656..1426781,1429767..1429877,1433720..1434380)
location: region:1397990-1434380:1
so has part: feature:1397990-1398459:1:exon
so has part: feature:1404037-1404136:1:exon
so has part: feature:1404807-1404884:1:exon
so has part: feature:1408320-1408435:1:exon
so has part: feature:1408592-1408744:1:exon
so has part: feature:1411507-1411581:1:exon
so has part: feature:1415594-1415718:1:exon
so has part: feature:1416701-1416974:1:exon
so has part: feature:1419453-1419590:1:exon
so has part: feature:1423131-1423284:1:exon
so has part: feature:1426453-1426560:1:exon
so has part: feature:1426656-1426781:1:exon
so has part: feature:1429767-1429877:1:exon
so has part: feature:1433720-1434380:1:exon

position:1434380:1
position: 1434380
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1397990-1398459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404037-1404136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404807-1404884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408320-1408435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1408592-1408744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411507-1411581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415594-1415718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1416701-1416974:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419453-1419590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423131-1423284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1426453-1426560:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426656-1426781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1429767-1429877:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433720-1434380:1:exon

AFG3L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: AFG3L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG3-like protein 2 isoform X1
translation: MAHRCLRLWGWGGCWPRGLQQLRVPGGVGPGEQPCLRTLYRFVTTQTRASRNSLLTDVIAAYQRFCSRPPKGFEKYFPNGKNGKEASEPKEVMGEKKGTESKPAATTRSSGGGGGGGGGKRGGKKDDSHWWSRFQKGDFPWDDKDFRMFFLWTSLFWGGVMFYFLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDWNKEREKEKEEPPGEKVAN
SIO_010081: AFG3L2
subclass of: SO_0000673
so part of: AFG3L2
location: join(1398346..1398459,1404037..1404136,1404807..1404884,1408320..1408435,1408592..1408744,1411507..1411581,1415594..1415718,1416701..1416974,1419453..1419590,1423131..1423284,1426453..1426560,1426656..1426781,1429767..1429877,1433720..1433835,1438244..1438444,1440813..1441007,1449628..1449846)
location: region:1398346-1449846:1
so has part: feature:1398346-1398459:1:exon
so has part: feature:1404037-1404136:1:exon
so has part: feature:1404807-1404884:1:exon
so has part: feature:1408320-1408435:1:exon
so has part: feature:1408592-1408744:1:exon
so has part: feature:1411507-1411581:1:exon
so has part: feature:1415594-1415718:1:exon
so has part: feature:1416701-1416974:1:exon
so has part: feature:1419453-1419590:1:exon
so has part: feature:1423131-1423284:1:exon
so has part: feature:1426453-1426560:1:exon
so has part: feature:1426656-1426781:1:exon
so has part: feature:1429767-1429877:1:exon
so has part: feature:1433720-1433835:1:exon
so has part: feature:1438244-1438444:1:exon
so has part: feature:1440813-1441007:1:exon
so has part: feature:1449628-1449846:1:exon

XP_025220663.1
type: Protein
SIO_000068: ncbiprotein

position:1398346:1
position: 1398346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1449846:1
position: 1449846
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398346-1398459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404037-1404136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404807-1404884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408320-1408435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1408592-1408744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411507-1411581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415594-1415718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1416701-1416974:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419453-1419590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423131-1423284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1426453-1426560:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426656-1426781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1429767-1429877:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433720-1433835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438244-1438444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440813-1441007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1449628-1449846:1:exon

AFG3L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: AFG3L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG3-like protein 2 isoform X2
translation: MAHRCLRLWGWGGCWPRGLQQLRVPGGVGPGEQPCLRTLYRFVTTQTRASRNSLLTDVIAAYQRFCSRPPKGFEKYFPNGKNGKEASEPKEVMGEKKESKPAATTRSSGGGGGGGGGKRGGKKDDSHWWSRFQKGDFPWDDKDFRMFFLWTSLFWGGVMFYFLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTKEQLLDRMCMTLGGRVSEEIFFGRITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDLPRQGDMVLEKPYSEATARLIDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVELLGPRPFAEKSTYEEFVEGTGSLDEDTSLPEGLKDWNKEREKEKEEPPGEKVAN
SIO_010081: AFG3L2
subclass of: SO_0000673
so part of: AFG3L2
location: join(1398346..1398459,1404037..1404136,1404807..1404884,1408326..1408435,1408592..1408744,1411507..1411581,1415594..1415718,1416701..1416974,1419453..1419590,1423131..1423284,1426453..1426560,1426656..1426781,1429767..1429877,1433720..1433835,1438244..1438444,1440813..1441007,1449628..1449846)
location: region:1398346-1449846:1
so has part: feature:1398346-1398459:1:exon
so has part: feature:1404037-1404136:1:exon
so has part: feature:1404807-1404884:1:exon
so has part: feature:1408326-1408435:1:exon
so has part: feature:1408592-1408744:1:exon
so has part: feature:1411507-1411581:1:exon
so has part: feature:1415594-1415718:1:exon
so has part: feature:1416701-1416974:1:exon
so has part: feature:1419453-1419590:1:exon
so has part: feature:1423131-1423284:1:exon
so has part: feature:1426453-1426560:1:exon
so has part: feature:1426656-1426781:1:exon
so has part: feature:1429767-1429877:1:exon
so has part: feature:1433720-1433835:1:exon
so has part: feature:1438244-1438444:1:exon
so has part: feature:1440813-1441007:1:exon
so has part: feature:1449628-1449846:1:exon

XP_025220664.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1398346-1398459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404037-1404136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404807-1404884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408326-1408435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1408592-1408744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411507-1411581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415594-1415718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1416701-1416974:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419453-1419590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423131-1423284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1426453-1426560:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426656-1426781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1429767-1429877:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433720-1433835:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1438244-1438444:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1440813-1441007:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1449628-1449846:1:exon

AFG3L2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: AFG3L2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: AFG3-like protein 2 isoform X3
translation: MAHRCLRLWGWGGCWPRGLQQLRVPGGVGPGEQPCLRTLYRFVTTQTRASRNSLLTDVIAAYQRFCSRPPKGFEKYFPNGKNGKEASEPKEVMGEKKGTESKPAATTRSSGGGGGGGGGKRGGKKDDSHWWSRFQKGDFPWDDKDFRMFFLWTSLFWGGVMFYFLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIGSVDTFERNLETLQQELGIEGENRVPVVYIAESDGSFLLSMLPTVLIIAFLLYTIRRGPAGIGRTGRGMGGLFSVGETTAKVLKDEIDVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQVLQPEEKKTVAYHEAGHAVAGWYLEHADPLLKVKQGGCTRQPEHV
SIO_010081: AFG3L2
subclass of: SO_0000673
so part of: AFG3L2
location: join(1398346..1398459,1404037..1404136,1404807..1404884,1408320..1408435,1408592..1408744,1411507..1411581,1415594..1415718,1416701..1416974,1419453..1419590,1423131..1423284,1426453..1426560,1426656..1426781,1429767..1429877,1433720..1433877)
location: region:1398346-1433877:1
so has part: feature:1398346-1398459:1:exon
so has part: feature:1404037-1404136:1:exon
so has part: feature:1404807-1404884:1:exon
so has part: feature:1408320-1408435:1:exon
so has part: feature:1408592-1408744:1:exon
so has part: feature:1411507-1411581:1:exon
so has part: feature:1415594-1415718:1:exon
so has part: feature:1416701-1416974:1:exon
so has part: feature:1419453-1419590:1:exon
so has part: feature:1423131-1423284:1:exon
so has part: feature:1426453-1426560:1:exon
so has part: feature:1426656-1426781:1:exon
so has part: feature:1429767-1429877:1:exon
so has part: feature:1433720-1433877:1:exon

XP_025220665.1
type: Protein
SIO_000068: ncbiprotein

position:1433877:1
position: 1433877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1398346-1398459:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1404037-1404136:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1404807-1404884:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1408320-1408435:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1408592-1408744:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1411507-1411581:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1415594-1415718:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1416701-1416974:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1419453-1419590:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1423131-1423284:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1426453-1426560:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1426656-1426781:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1429767-1429877:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1433720-1433877:1:exon

TUBB6
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1449585..1472786)
location: region:1449585-1472786:-1
so has part: feature:1449585-1472786:-1:exon
subclass of: SO_0000010

112611258
type: Gene
SIO_000068: ncbigene

position:1449585:-1
position: 1449585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472786:-1
position: 1472786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1449585-1472786:-1:exon

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X12
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 1 Protein, and 93% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364893.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1449585..1450262,1469005..1469115,1471240..1471348,1471686..1472067))
location: region:1449585-1472067:-1
so has part: feature:1471686-1472067:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1449585-1450262:-1:exon

position:1472067:-1
position: 1472067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1472067:-1:exon

position:1471686:-1
position: 1471686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

position:1471240:-1
position: 1471240
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1471348:-1
position: 1471348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

position:1469005:-1
position: 1469005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1469115:-1
position: 1469115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1449585-1450262:-1:exon

position:1450262:-1
position: 1450262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X12
translation: MGAGAAPLPVSSPPGPGPSFSARLPARVPDWRPRPSPPAAGWAAASSGDGGAGPTAIGERRGGGGGAESRARDAGSRPAVAAVVRRASAQRRAAPAMREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFAHLHRGTEEKQE
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1450225..1450262,1469005..1469115,1471240..1471348,1471686..1472030))
location: region:1450225-1472030:-1
so has part: feature:1471686-1472030:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1450225-1450262:-1:exon

XP_025220678.1
type: Protein
SIO_000068: ncbiprotein

position:1450225:-1
position: 1450225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1472030:-1
position: 1472030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1472030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1450225-1450262:-1:exon

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 403 ESTs, 66 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364883.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454375,1469005..1469115,1471240..1471348,1471686..1471773,1472256..1472786))
location: region:1452851-1472786:-1
so has part: feature:1472256-1472786:-1:exon
so has part: feature:1471686-1471773:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1452851-1454375:-1:exon

position:1452851:-1
position: 1452851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1472256-1472786:-1:exon

position:1472256:-1
position: 1472256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1471686-1471773:-1:exon

position:1471773:-1
position: 1471773
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1452851-1454375:-1:exon

position:1454375:-1
position: 1454375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 268 ESTs, 23 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364886.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454375,1469005..1469115,1471686..1472307))
location: region:1452851-1472307:-1
so has part: feature:1471686-1472307:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1452851-1454375:-1:exon

position:1472307:-1
position: 1472307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1472307:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1452851-1454375:-1:exon

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 272 ESTs, 16 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364882.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454375,1471240..1471348,1471686..1472070))
location: region:1452851-1472070:-1
so has part: feature:1471686-1472070:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1452851-1454375:-1:exon

position:1472070:-1
position: 1472070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1472070:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1452851-1454375:-1:exon

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 558 ESTs, 68 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364881.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454375,1469005..1469115,1471240..1471348,1471686..1472065))
location: region:1452851-1472065:-1
so has part: feature:1471686-1472065:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1452851-1454375:-1:exon

position:1472065:-1
position: 1472065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1472065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1452851-1454375:-1:exon

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 264 ESTs, 16 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364890.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454375,1458695..1458810,1469005..1469115,1471240..1471348,1471686..1471973))
location: region:1452851-1471973:-1
so has part: feature:1471686-1471973:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1458695-1458810:-1:exon
so has part: feature:1452851-1454375:-1:exon

position:1471973:-1
position: 1471973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471973:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1458695-1458810:-1:exon

position:1458695:-1
position: 1458695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1458810:-1
position: 1458810
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1452851-1454375:-1:exon

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 267 ESTs, 24 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364887.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454375,1469005..1469110,1471686..1471804))
location: region:1452851-1471804:-1
so has part: feature:1471686-1471804:-1:exon
so has part: feature:1469005-1469110:-1:exon
so has part: feature:1452851-1454375:-1:exon

position:1471804:-1
position: 1471804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1469005-1469110:-1:exon

position:1469110:-1
position: 1469110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452851-1454375:-1:exon

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X11
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 246 ESTs, 11 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364892.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454259,1471286..1471348,1471686..1471804))
location: region:1452851-1471804:-1
so has part: feature:1471686-1471804:-1:exon
so has part: feature:1471286-1471348:-1:exon
so has part: feature:1452851-1454259:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471286-1471348:-1:exon

position:1471286:-1
position: 1471286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1452851-1454259:-1:exon

position:1454259:-1
position: 1454259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 249 ESTs, 10 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364888.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454257,1469031..1469115,1471240..1471348,1471686..1471804))
location: region:1452851-1471804:-1
so has part: feature:1471686-1471804:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469031-1469115:-1:exon
so has part: feature:1452851-1454257:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469031-1469115:-1:exon

position:1469031:-1
position: 1469031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1452851-1454257:-1:exon

position:1454257:-1
position: 1454257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 251 ESTs, 12 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364884.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454277,1454350..1454375,1469005..1469115,1471240..1471348,1471686..1471804))
location: region:1452851-1471804:-1
so has part: feature:1471686-1471804:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1454350-1454375:-1:exon
so has part: feature:1452851-1454277:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1454350-1454375:-1:exon

position:1454350:-1
position: 1454350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1452851-1454277:-1:exon

position:1454277:-1
position: 1454277
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X10
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 244 ESTs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364891.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454006,1454253..1454375,1469005..1469115,1471240..1471348,1471686..1471804))
location: region:1452851-1471804:-1
so has part: feature:1471686-1471804:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1454253-1454375:-1:exon
so has part: feature:1452851-1454006:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471804:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1454253-1454375:-1:exon

position:1454253:-1
position: 1454253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1452851-1454006:-1:exon

position:1454006:-1
position: 1454006
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TUBB6
product: tubulin beta 6 class V, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 264 ESTs, 16 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364889.1
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1452851..1454475,1469005..1469115,1471240..1471348,1471686..1471788))
location: region:1452851-1471788:-1
so has part: feature:1471686-1471788:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1452851-1454475:-1:exon

position:1471788:-1
position: 1471788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1452851-1454475:-1:exon

position:1454475:-1
position: 1454475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X2
translation: MGAGAAPLPVSSPPGPGPSFSARLPARVPDWRPRPSPPAAGWAAASSGDGGAGPTAIGERRGGGGGAESRARDAGSRPAVAAVVRRASAQRRAAPAMREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSCQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454375,1471240..1471348,1471686..1472030))
location: region:1453312-1472030:-1
so has part: feature:1471686-1472030:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1453312-1454375:-1:exon

XP_025220667.1
type: Protein
SIO_000068: ncbiprotein

position:1453312:-1
position: 1453312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1472030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453312-1454375:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X1
translation: MGAGAAPLPVSSPPGPGPSFSARLPARVPDWRPRPSPPAAGWAAASSGDGGAGPTAIGERRGGGGGAESRARDAGSRPAVAAVVRRASAQRRAAPAMREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454375,1469005..1469115,1471240..1471348,1471686..1472030))
location: region:1453312-1472030:-1
so has part: feature:1471686-1472030:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1453312-1454375:-1:exon

XP_025220666.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1472030:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453312-1454375:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X6
translation: MREIVHIQAGQCGNQIGTKKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454375,1469005..1469110,1471686..1471742))
location: region:1453312-1471742:-1
so has part: feature:1471686-1471742:-1:exon
so has part: feature:1469005-1469110:-1:exon
so has part: feature:1453312-1454375:-1:exon

XP_025220672.1
type: Protein
SIO_000068: ncbiprotein

position:1471742:-1
position: 1471742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1469005-1469110:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453312-1454375:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X11
translation: MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454259,1471286..1471348,1471686..1471742))
location: region:1453312-1471742:-1
so has part: feature:1471686-1471742:-1:exon
so has part: feature:1471286-1471348:-1:exon
so has part: feature:1453312-1454259:-1:exon

XP_025220677.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471286-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1453312-1454259:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X7
translation: MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454257,1469031..1469115,1471240..1471348,1471686..1471742))
location: region:1453312-1471742:-1
so has part: feature:1471686-1471742:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469031-1469115:-1:exon
so has part: feature:1453312-1454257:-1:exon

XP_025220673.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469031-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453312-1454257:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X4
translation: MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454277,1454350..1454375,1469005..1469115,1471240..1471348,1471686..1471742))
location: region:1453312-1471742:-1
so has part: feature:1471686-1471742:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1454350-1454375:-1:exon
so has part: feature:1453312-1454277:-1:exon

XP_025220669.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1454350-1454375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1453312-1454277:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X10
translation: MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454006,1454253..1454375,1469005..1469115,1471240..1471348,1471686..1471742))
location: region:1453312-1471742:-1
so has part: feature:1471686-1471742:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1454253-1454375:-1:exon
so has part: feature:1453312-1454006:-1:exon

XP_025220676.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1454253-1454375:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1453312-1454006:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X3
translation: MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLERISVYYNESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454375,1469005..1469115,1471240..1471348,1471686..1471742))
location: region:1453312-1471742:-1
so has part: feature:1471686-1471742:-1:exon
so has part: feature:1471240-1471348:-1:exon
so has part: feature:1469005-1469115:-1:exon
so has part: feature:1453312-1454375:-1:exon

XP_025220668.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1471686-1471742:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1471240-1471348:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1469005-1469115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1453312-1454375:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X5
translation: MDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454375,1469005..1469065))
location: region:1453312-1469065:-1
so has part: feature:1469005-1469065:-1:exon
so has part: feature:1453312-1454375:-1:exon

XP_025220671.1
type: Protein
SIO_000068: ncbiprotein

position:1469065:-1
position: 1469065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1469005-1469065:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1453312-1454375:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X9
translation: MAASFLLMAESILCKDIAMDLTSLQVICQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(join(1453312..1454375,1458695..1458776))
location: region:1453312-1458776:-1
so has part: feature:1458695-1458776:-1:exon
so has part: feature:1453312-1454375:-1:exon

XP_025220675.1
type: Protein
SIO_000068: ncbiprotein

position:1458776:-1
position: 1458776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1458695-1458776:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1453312-1454375:-1:exon

TUBB6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TUBB6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin beta-6 chain isoform X8
translation: MESLHALLVGAQARCWRSPLLFKRHGTLSVAGQTGAGNNWAKGHYTEGAELVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMASTFIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGMDEMEFTEAESNMNDLVSEYQQYQDATANDGEEAFEDEEEEIDG
SIO_010081: TUBB6
subclass of: SO_0000673
so part of: TUBB6
location: complement(1453312..1454469)
location: region:1453312-1454469:-1
so has part: feature:1453312-1454469:-1:exon

XP_025220674.1
type: Protein
SIO_000068: ncbiprotein

position:1454469:-1
position: 1454469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1453312-1454469:-1:exon

LOC112611818
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611818
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1475834..1475935
location: region:1475834-1475935:1
so has part: feature:1475834-1475935:1:exon
subclass of: SO_0000623

112611818
type: Gene
SIO_000068: ncbigene

position:1475834:1
position: 1475834
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1475935:1
position: 1475935
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1475834-1475935:1:exon

LOC112611818
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: snRNA
gene: LOC112611818
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003116777.1
SIO_010081: LOC112611818
subclass of: SO_0000673
so part of: LOC112611818
location: 1475834..1475935
location: region:1475834-1475935:1
so has part: feature:1475834-1475935:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1475834-1475935:1:exon

CIDEA
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: CIDEA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1498653..1519848)
location: region:1498653-1519848:-1
so has part: feature:1498653-1519848:-1:exon
subclass of: SO_0000010

112611505
type: Gene
SIO_000068: ncbigene

position:1498653:-1
position: 1498653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519848:-1
position: 1519848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498653-1519848:-1:exon

CIDEA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: CIDEA
product: cell death-inducing DFFA-like effector a, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 4 Proteins
transcript id: XM_025365407.1
SIO_010081: CIDEA
subclass of: SO_0000673
so part of: CIDEA
location: complement(join(1498653..1499121,1502305..1502486,1511064..1511210,1513119..1513263,1519752..1519848))
location: region:1498653-1519848:-1
so has part: feature:1519752-1519848:-1:exon
so has part: feature:1513119-1513263:-1:exon
so has part: feature:1511064-1511210:-1:exon
so has part: feature:1502305-1502486:-1:exon
so has part: feature:1498653-1499121:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1519752-1519848:-1:exon

position:1519752:-1
position: 1519752
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1513119-1513263:-1:exon

position:1513119:-1
position: 1513119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1513263:-1
position: 1513263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1511064-1511210:-1:exon

position:1511064:-1
position: 1511064
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1511210:-1
position: 1511210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1502305-1502486:-1:exon

position:1502305:-1
position: 1502305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1502486:-1
position: 1502486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1498653-1499121:-1:exon

position:1499121:-1
position: 1499121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CIDEA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: CIDEA
product: cell death-inducing DFFA-like effector a, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 22 ESTs, 3 Proteins
transcript id: XM_025365408.1
SIO_010081: CIDEA
subclass of: SO_0000673
so part of: CIDEA
location: complement(join(1498653..1499121,1502305..1502486,1511064..1511210,1513119..1513263,1519214..1519812))
location: region:1498653-1519812:-1
so has part: feature:1519214-1519812:-1:exon
so has part: feature:1513119-1513263:-1:exon
so has part: feature:1511064-1511210:-1:exon
so has part: feature:1502305-1502486:-1:exon
so has part: feature:1498653-1499121:-1:exon

position:1519812:-1
position: 1519812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1519214-1519812:-1:exon

position:1519214:-1
position: 1519214
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1513119-1513263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1511064-1511210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502305-1502486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498653-1499121:-1:exon

CIDEA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: CIDEA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell death activator CIDE-A isoform X1
translation: MEAARDYAGALIRPLTFMGSQTKRVLLSPLTHPARPFRVSNHDRSSRRGVMASSLQELISKTLDALVITTGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMILEKGQKWMLGSKHIPTCSPPKRSGIARVTFDLYRLNPKDFIGCLNVKATMYEMYSVSYDIRCTGLKGLLRSLLRFLSYSAQVTGQFLVYMGTYMLRVLDDKEERPSLRSQAKGRFTCG
SIO_010081: CIDEA
subclass of: SO_0000673
so part of: CIDEA
location: complement(join(1498974..1499121,1502305..1502486,1511064..1511210,1513119..1513263,1519752..1519789))
location: region:1498974-1519789:-1
so has part: feature:1519752-1519789:-1:exon
so has part: feature:1513119-1513263:-1:exon
so has part: feature:1511064-1511210:-1:exon
so has part: feature:1502305-1502486:-1:exon
so has part: feature:1498974-1499121:-1:exon

XP_025221192.1
type: Protein
SIO_000068: ncbiprotein

position:1498974:-1
position: 1498974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1519789:-1
position: 1519789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1519752-1519789:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513119-1513263:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1511064-1511210:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1502305-1502486:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1498974-1499121:-1:exon

CIDEA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: CIDEA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell death activator CIDE-A isoform X2
translation: MGSQTKRVLLSPLTHPARPFRVSNHDRSSRRGVMASSLQELISKTLDALVITTGLVTLVLEEDGTVVDTEEFFQTLGDNTHFMILEKGQKWMLGSKHIPTCSPPKRSGIARVTFDLYRLNPKDFIGCLNVKATMYEMYSVSYDIRCTGLKGLLRSLLRFLSYSAQVTGQFLVYMGTYMLRVLDDKEERPSLRSQAKGRFTCG
SIO_010081: CIDEA
subclass of: SO_0000673
so part of: CIDEA
location: complement(join(1498974..1499121,1502305..1502486,1511064..1511210,1513119..1513250))
location: region:1498974-1513250:-1
so has part: feature:1513119-1513250:-1:exon
so has part: feature:1511064-1511210:-1:exon
so has part: feature:1502305-1502486:-1:exon
so has part: feature:1498974-1499121:-1:exon

XP_025221193.1
type: Protein
SIO_000068: ncbiprotein

position:1513250:-1
position: 1513250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513119-1513250:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1511064-1511210:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1502305-1502486:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1498974-1499121:-1:exon

LOC112611707
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1540075..1540956)
location: region:1540075-1540956:-1
so has part: feature:1540075-1540956:-1:exon

112611707
type: Gene
SIO_000068: ncbigene

position:1540075:-1
position: 1540075
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1540956:-1
position: 1540956
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1540075-1540956:-1:exon

LOC112611707
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611707
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 16% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112611707
subclass of: SO_0000673
so part of: LOC112611707
location: complement(1540075..1540956)
location: region:1540075-1540956:-1
so has part: feature:1540075-1540956:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1540075-1540956:-1:exon

LOC112611604
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611604
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1557432..1558170
location: region:1557432-1558170:1
so has part: feature:1557432-1558170:1:exon

112611604
type: Gene
SIO_000068: ncbigene

position:1557432:1
position: 1557432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1558170:1
position: 1558170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1557432-1558170:1:exon

LOC112611604
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611604
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC112611604
subclass of: SO_0000673
so part of: LOC112611604
location: 1557432..1558170
location: region:1557432-1558170:1
so has part: feature:1557432-1558170:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1557432-1558170:1:exon

ANKRD62
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: ANKRD62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1622140..1675172)
location: region:1622140-1675172:-1
so has part: feature:1622140-1675172:-1:exon
subclass of: SO_0000010

112611606
type: Gene
SIO_000068: ncbigene

position:1622140:-1
position: 1622140
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1675172:-1
position: 1675172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1622140-1675172:-1:exon

ANKRD62
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: ANKRD62
product: ankyrin repeat domain 62
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 3 Proteins
transcript id: XM_025365568.1
SIO_010081: ANKRD62
subclass of: SO_0000673
so part of: ANKRD62
location: complement(join(1622140..1622331,1623695..1624618,1625776..1625959,1627565..1627778,1635253..1635394,1635662..1635695,1643024..1643193,1647465..1647535,1669245..1669312,1671763..1671900,1673248..1673354,1673943..1674116,1674268..1674382,1674955..1675172))
location: region:1622140-1675172:-1
so has part: feature:1674955-1675172:-1:exon
so has part: feature:1674268-1674382:-1:exon
so has part: feature:1673943-1674116:-1:exon
so has part: feature:1673248-1673354:-1:exon
so has part: feature:1671763-1671900:-1:exon
so has part: feature:1669245-1669312:-1:exon
so has part: feature:1647465-1647535:-1:exon
so has part: feature:1643024-1643193:-1:exon
so has part: feature:1635662-1635695:-1:exon
so has part: feature:1635253-1635394:-1:exon
so has part: feature:1627565-1627778:-1:exon
so has part: feature:1625776-1625959:-1:exon
so has part: feature:1623695-1624618:-1:exon
so has part: feature:1622140-1622331:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1674955-1675172:-1:exon

position:1674955:-1
position: 1674955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1674268-1674382:-1:exon

position:1674268:-1
position: 1674268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674382:-1
position: 1674382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1673943-1674116:-1:exon

position:1673943:-1
position: 1673943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1674116:-1
position: 1674116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1673248-1673354:-1:exon

position:1673248:-1
position: 1673248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1673354:-1
position: 1673354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1671763-1671900:-1:exon

position:1671763:-1
position: 1671763
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1671900:-1
position: 1671900
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1669245-1669312:-1:exon

position:1669245:-1
position: 1669245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669312:-1
position: 1669312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1647465-1647535:-1:exon

position:1647465:-1
position: 1647465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1647535:-1
position: 1647535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1643024-1643193:-1:exon

position:1643024:-1
position: 1643024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1643193:-1
position: 1643193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1635662-1635695:-1:exon

position:1635662:-1
position: 1635662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635695:-1
position: 1635695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1635253-1635394:-1:exon

position:1635253:-1
position: 1635253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1635394:-1
position: 1635394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1627565-1627778:-1:exon

position:1627565:-1
position: 1627565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1627778:-1
position: 1627778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1625776-1625959:-1:exon

position:1625776:-1
position: 1625776
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1625959:-1
position: 1625959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1623695-1624618:-1:exon

position:1623695:-1
position: 1623695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1624618:-1
position: 1624618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1622140-1622331:-1:exon

position:1622331:-1
position: 1622331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD62
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: ANKRD62
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 62
translation: MGVGGSFLGTCGGCMAPWRENRGKDGFSNPGYRVRQKDLGMIHKAAIAGDVNKVQESILLRLNDVNDRDNKNRTALHLACAHGHPGVVADLVARKCQLNLTDSENRTALIKAVQCQEEVCASILLEHGADPNVRDMYGNTALHYAIDNENISMAGKLLAYGADIEAKSQDEYTSLLLAINRKKEQMVTFLLKKKPDLTAIDNFGRTALILAACNGSTGVVFQLLQHNVDVCCRDISGWTAEDHAIAYNFQAIRRLISEYKANKRRKRLQNRNPEQDLKLISEGEQDRLQGCENNQPQVAEKMRKCRNKKMEVSRYLHADDSDNDDDDDELIQERRGRKSDDHQFPRQKREEYNRLARKTSNEKNKVKRDLYSKDDLNDIIWSPETSSEDDDLPYSSDKNFMLFIEQHGMEHKDFVSLLKIKNAITACERSIEHKKCNCEQLKVKFQKMKNKISMLQKELSETDKTKSQLQHQNLECKQKLCNFSCILQEEEEKRRKAEELYEKDTEELKIMEEQYRTQTEVKKQLQLTLKSLEVELKTVRSNSNESSHTHEKERDLWQENHLMRDEIARLRLEIDTIKYQNQETEKKYFKDIEIIKENNEDLEKTLKLNEETLTKTITRYSKEVSALMDENTVLNLELEKEKQSTQRLKTEMESYPCRLAAALHDHDQCQSAKRDRQLAFQSTVNEWCHLQENINSHIQILSQQLSKVESTSSGLETELHYEREALKEKTLAIEHMQGVLSRTQCQLKDIEHMYQNDQPIFEKYVRKQQSVEDGLFQLQSRNLLYQQQCNDADKKADNQEKTIINIRAKCEDTVEKLQADCRKLEENNKELMKECTLLKERQCQYEKEKEEEEVVMRQLQREVGDTLNKQSLSEAMLEISSQCHHNLEDETRDSKKKLDQLRSQVCMKLSMSTVTL
SIO_010081: ANKRD62
subclass of: SO_0000673
so part of: ANKRD62
location: complement(join(1622140..1622331,1623695..1624618,1625776..1625959,1627565..1627778,1635253..1635394,1635662..1635695,1643024..1643193,1647465..1647535,1669245..1669312,1671763..1671900,1673248..1673354,1673943..1674116,1674268..1674382,1674955..1675172))
location: region:1622140-1675172:-1
so has part: feature:1674955-1675172:-1:exon
so has part: feature:1674268-1674382:-1:exon
so has part: feature:1673943-1674116:-1:exon
so has part: feature:1673248-1673354:-1:exon
so has part: feature:1671763-1671900:-1:exon
so has part: feature:1669245-1669312:-1:exon
so has part: feature:1647465-1647535:-1:exon
so has part: feature:1643024-1643193:-1:exon
so has part: feature:1635662-1635695:-1:exon
so has part: feature:1635253-1635394:-1:exon
so has part: feature:1627565-1627778:-1:exon
so has part: feature:1625776-1625959:-1:exon
so has part: feature:1623695-1624618:-1:exon
so has part: feature:1622140-1622331:-1:exon

XP_025221353.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1674955-1675172:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1674268-1674382:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1673943-1674116:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1673248-1673354:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1671763-1671900:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1669245-1669312:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1647465-1647535:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1643024-1643193:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1635662-1635695:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1635253-1635394:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1627565-1627778:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1625776-1625959:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1623695-1624618:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1622140-1622331:-1:exon

LOC112611810
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611810
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1670406..1670511)
location: region:1670406-1670511:-1
so has part: feature:1670406-1670511:-1:exon
subclass of: SO_0000623

112611810
type: Gene
SIO_000068: ncbigene

position:1670406:-1
position: 1670406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1670511:-1
position: 1670511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1670406-1670511:-1:exon

LOC112611810
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: snRNA
gene: LOC112611810
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003116771.1
SIO_010081: LOC112611810
subclass of: SO_0000673
so part of: LOC112611810
location: complement(1670406..1670511)
location: region:1670406-1670511:-1
so has part: feature:1670406-1670511:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1670406-1670511:-1:exon

PIEZO2
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: PIEZO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1720274..2182608)
location: region:1720274-2182608:-1
so has part: feature:1720274-2182608:-1:exon
subclass of: SO_0000010

112611477
type: Gene
SIO_000068: ncbigene

position:1720274:-1
position: 1720274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2182608:-1
position: 2182608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1720274-2182608:-1:exon

PIEZO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PIEZO2
product: piezo type mechanosensitive ion channel component 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 109 ESTs, 7 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365354.1
SIO_010081: PIEZO2
subclass of: SO_0000673
so part of: PIEZO2
location: complement(join(1720274..1721820,1722734..1722917,1725254..1725333,1727782..1727910,1730216..1730388,1731659..1731751,1732115..1732303,1734339..1734486,1735897..1736055,1740764..1740978,1741082..1741229,1742438..1742570,1743579..1743831,1746922..1747104,1749238..1749496,1750178..1750588,1759630..1759796,1760538..1760704,1763321..1763380,1776042..1776156,1781206..1781312,1785923..1785994,1787356..1787477,1789018..1789107,1793338..1793497,1794951..1795047,1797483..1797726,1803355..1803520,1805011..1805112,1805234..1805438,1806452..1806652,1808037..1808162,1808458..1808634,1817090..1817250,1820505..1820722,1832633..1832806,1834874..1835022,1836916..1837205,1838946..1839069,1843090..1843320,1845976..1846124,1848999..1849137,1850058..1850096,1853835..1853954,1857100..1857262,1906473..1906686,1908096..1908306,1921430..1921592,1954119..1954161,2020017..2020142,2096909..2097004,2182377..2182608))
location: region:1720274-2182608:-1
so has part: feature:2182377-2182608:-1:exon
so has part: feature:2096909-2097004:-1:exon
so has part: feature:2020017-2020142:-1:exon
so has part: feature:1954119-1954161:-1:exon
so has part: feature:1921430-1921592:-1:exon
so has part: feature:1908096-1908306:-1:exon
so has part: feature:1906473-1906686:-1:exon
so has part: feature:1857100-1857262:-1:exon
so has part: feature:1853835-1853954:-1:exon
so has part: feature:1850058-1850096:-1:exon
so has part: feature:1848999-1849137:-1:exon
so has part: feature:1845976-1846124:-1:exon
so has part: feature:1843090-1843320:-1:exon
so has part: feature:1838946-1839069:-1:exon
so has part: feature:1836916-1837205:-1:exon
so has part: feature:1834874-1835022:-1:exon
so has part: feature:1832633-1832806:-1:exon
so has part: feature:1820505-1820722:-1:exon
so has part: feature:1817090-1817250:-1:exon
so has part: feature:1808458-1808634:-1:exon
so has part: feature:1808037-1808162:-1:exon
so has part: feature:1806452-1806652:-1:exon
so has part: feature:1805234-1805438:-1:exon
so has part: feature:1805011-1805112:-1:exon
so has part: feature:1803355-1803520:-1:exon
so has part: feature:1797483-1797726:-1:exon
so has part: feature:1794951-1795047:-1:exon
so has part: feature:1793338-1793497:-1:exon
so has part: feature:1789018-1789107:-1:exon
so has part: feature:1787356-1787477:-1:exon
so has part: feature:1785923-1785994:-1:exon
so has part: feature:1781206-1781312:-1:exon
so has part: feature:1776042-1776156:-1:exon
so has part: feature:1763321-1763380:-1:exon
so has part: feature:1760538-1760704:-1:exon
so has part: feature:1759630-1759796:-1:exon
so has part: feature:1750178-1750588:-1:exon
so has part: feature:1749238-1749496:-1:exon
so has part: feature:1746922-1747104:-1:exon
so has part: feature:1743579-1743831:-1:exon
so has part: feature:1742438-1742570:-1:exon
so has part: feature:1741082-1741229:-1:exon
so has part: feature:1740764-1740978:-1:exon
so has part: feature:1735897-1736055:-1:exon
so has part: feature:1734339-1734486:-1:exon
so has part: feature:1732115-1732303:-1:exon
so has part: feature:1731659-1731751:-1:exon
so has part: feature:1730216-1730388:-1:exon
so has part: feature:1727782-1727910:-1:exon
so has part: feature:1725254-1725333:-1:exon
so has part: feature:1722734-1722917:-1:exon
so has part: feature:1720274-1721820:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2182377-2182608:-1:exon

position:2182377:-1
position: 2182377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2096909-2097004:-1:exon

position:2096909:-1
position: 2096909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2097004:-1
position: 2097004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2020017-2020142:-1:exon

position:2020017:-1
position: 2020017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2020142:-1
position: 2020142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1954119-1954161:-1:exon

position:1954119:-1
position: 1954119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1954161:-1
position: 1954161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1921430-1921592:-1:exon

position:1921430:-1
position: 1921430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1921592:-1
position: 1921592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1908096-1908306:-1:exon

position:1908096:-1
position: 1908096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1908306:-1
position: 1908306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1906473-1906686:-1:exon

position:1906473:-1
position: 1906473
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1906686:-1
position: 1906686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1857100-1857262:-1:exon

position:1857100:-1
position: 1857100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1857262:-1
position: 1857262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1853835-1853954:-1:exon

position:1853835:-1
position: 1853835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1853954:-1
position: 1853954
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1850058-1850096:-1:exon

position:1850058:-1
position: 1850058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1850096:-1
position: 1850096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1848999-1849137:-1:exon

position:1848999:-1
position: 1848999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1849137:-1
position: 1849137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1845976-1846124:-1:exon

position:1845976:-1
position: 1845976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1846124:-1
position: 1846124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1843090-1843320:-1:exon

position:1843090:-1
position: 1843090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1843320:-1
position: 1843320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1838946-1839069:-1:exon

position:1838946:-1
position: 1838946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1839069:-1
position: 1839069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1836916-1837205:-1:exon

position:1836916:-1
position: 1836916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1837205:-1
position: 1837205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1834874-1835022:-1:exon

position:1834874:-1
position: 1834874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1835022:-1
position: 1835022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1832633-1832806:-1:exon

position:1832633:-1
position: 1832633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1832806:-1
position: 1832806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1820505-1820722:-1:exon

position:1820505:-1
position: 1820505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1820722:-1
position: 1820722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1817090-1817250:-1:exon

position:1817090:-1
position: 1817090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1817250:-1
position: 1817250
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1808458-1808634:-1:exon

position:1808458:-1
position: 1808458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808634:-1
position: 1808634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1808037-1808162:-1:exon

position:1808037:-1
position: 1808037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1808162:-1
position: 1808162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1806452-1806652:-1:exon

position:1806452:-1
position: 1806452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1806652:-1
position: 1806652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1805234-1805438:-1:exon

position:1805234:-1
position: 1805234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805438:-1
position: 1805438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1805011-1805112:-1:exon

position:1805011:-1
position: 1805011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1805112:-1
position: 1805112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1803355-1803520:-1:exon

position:1803355:-1
position: 1803355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1803520:-1
position: 1803520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1797483-1797726:-1:exon

position:1797483:-1
position: 1797483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1797726:-1
position: 1797726
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:1794951-1795047:-1:exon

position:1794951:-1
position: 1794951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1795047:-1
position: 1795047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1793338-1793497:-1:exon

position:1793338:-1
position: 1793338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1793497:-1
position: 1793497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:1789018-1789107:-1:exon

position:1789018:-1
position: 1789018
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1789107:-1
position: 1789107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:1787356-1787477:-1:exon

position:1787356:-1
position: 1787356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1787477:-1
position: 1787477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:1785923-1785994:-1:exon

position:1785923:-1
position: 1785923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1785994:-1
position: 1785994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:1781206-1781312:-1:exon

position:1781206:-1
position: 1781206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781312:-1
position: 1781312
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:1776042-1776156:-1:exon

position:1776042:-1
position: 1776042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1776156:-1
position: 1776156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:1763321-1763380:-1:exon

position:1763321:-1
position: 1763321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1763380:-1
position: 1763380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:1760538-1760704:-1:exon

position:1760538:-1
position: 1760538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1760704:-1
position: 1760704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:1759630-1759796:-1:exon

position:1759630:-1
position: 1759630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1759796:-1
position: 1759796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:1750178-1750588:-1:exon

position:1750178:-1
position: 1750178
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1750588:-1
position: 1750588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:1749238-1749496:-1:exon

position:1749238:-1
position: 1749238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1749496:-1
position: 1749496
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:1746922-1747104:-1:exon

position:1746922:-1
position: 1746922
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1747104:-1
position: 1747104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:1743579-1743831:-1:exon

position:1743579:-1
position: 1743579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1743831:-1
position: 1743831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:1742438-1742570:-1:exon

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urn:…
SIO_000300: 42
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urn:…
SIO_000300: 43
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urn:…
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urn:…
SIO_000300: 45
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urn:…
SIO_000300: 46
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urn:…
SIO_000300: 47
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urn:…
SIO_000300: 48
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urn:…
SIO_000300: 49
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urn:…
SIO_000300: 50
SIO_000628: feature:1725254-1725333:-1:exon

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urn:…
SIO_000300: 51
SIO_000628: feature:1722734-1722917:-1:exon

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urn:…
SIO_000300: 52
SIO_000628: feature:1720274-1721820:-1:exon

position:1721820:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PIEZO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PIEZO2
product: piezo type mechanosensitive ion channel component 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 101 ESTs, 4 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365353.1
SIO_010081: PIEZO2
subclass of: SO_0000673
so part of: PIEZO2
location: complement(join(1720274..1721820,1722734..1722917,1725254..1725333,1727782..1727910,1730216..1730388,1731659..1731751,1732115..1732303,1734339..1734486,1735897..1736055,1740764..1740978,1741082..1741229,1742438..1742570,1743579..1743831,1746922..1747104,1749238..1749496,1750178..1750588,1753104..1753268,1759630..1759796,1760538..1760704,1763321..1763380,1776042..1776156,1779839..1779937,1781206..1781312,1785923..1785994,1787356..1787477,1789018..1789107,1793338..1793497,1794951..1795047,1797483..1797726,1803355..1803520,1805011..1805112,1805234..1805438,1806452..1806652,1808037..1808162,1808458..1808634,1817090..1817250,1820505..1820722,1821095..1821127,1827931..1827972,1832633..1832806,1834874..1835022,1836916..1837205,1838946..1839069,1843090..1843320,1845976..1846124,1848999..1849137,1850058..1850096,1853835..1853954,1857100..1857262,1906473..1906686,1908096..1908306,1921430..1921592,1954119..1954161,2020017..2020142,2096909..2097004,2182377..2182440))
location: region:1720274-2182440:-1
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position:2182440:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182377-2182440:-1:exon

urn:…
SIO_000300: 2
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SIO_000300: 3
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SIO_000628: feature:1832633-1832806:-1:exon

urn:…
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SIO_000628: feature:1827931-1827972:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:1821095-1821127:-1:exon

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reference: sequence
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urn:…
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SIO_000628: feature:1806452-1806652:-1:exon

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SIO_000628: feature:1805234-1805438:-1:exon

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SIO_000628: feature:1805011-1805112:-1:exon

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SIO_000628: feature:1803355-1803520:-1:exon

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SIO_000628: feature:1797483-1797726:-1:exon

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SIO_000628: feature:1794951-1795047:-1:exon

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SIO_000628: feature:1793338-1793497:-1:exon

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SIO_000628: feature:1781206-1781312:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1779839-1779937:-1:exon

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SIO_000628: feature:1760538-1760704:-1:exon

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SIO_000628: feature:1759630-1759796:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1753104-1753268:-1:exon

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reference: sequence
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SIO_000628: feature:1732115-1732303:-1:exon

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SIO_000628: feature:1730216-1730388:-1:exon

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SIO_000628: feature:1722734-1722917:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1720274-1721820:-1:exon

PIEZO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PIEZO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piezo-type mechanosensitive ion channel component 2 isoform X2
translation: MASEVVCGLIFRLLLPICLAVACAFRYNGLSFVYLIYLLLIPLFSEPTKTTMQGHTGRLLKSLCFISLSFLLLHIIFHITLASLEAQHRIAPGYNCSTWEKTFRQIGFESLKGADAGNGIRVFVPDIGMFIASLTIWLLCRNIVQKPVTDEAAQSNLEFENQELAGGEKIDSEEALIYEEDLDGGDGVEGELEESTRLKMFRRLACVASKLKEFIGNMITTAGKVVVTILLGSSGMMLPSLTSSVYFFVFLGLCTWWSWCRTFDPLLFSCLCVLLAIFTAGHLIGLYLYQFQFFQEAVPPSDYYARLFGIKSVIQTDCSSTWKIIVNPDLSWYHHANPILLLVMYYTLATLIRIWLQEPLVQEERTKEEDKALACSPIQITAERRRSLWYATHYPTDERKLLSMTQDDYKPSDGLLVTVNGNPVDYHTIHPSLPMENGPGKADLYSTPQYRWEPSDESSEKREEEEEEKEEFEEERSREEKRSIKVHAMVSVFQFIMKQSYICALIAMMAWSITYHSWLTFVLLIWSCTLWMIRNRRKYAMISSPFMVVYGNLLLILQYIWSFELPEIKKVPGFLEKKEPGELASKILFTITFWLLLRQHLTEQKALREKEALLSEVKIGSQENEEKDEELQVIQVEGEPKETEEEEEAKEEKQERKKVEEEEVEEEDEQDIMKVLGNLVVAMFIKYWIYVCGGMFFFVSFEGKIVMYKIIYMVLFLFCVALYQVHYEWWRKILKYFWMSVVIYTMLVLIFIYTYQFENFPGLWQNMTGLKKEKLEDLGLKQFTVAELFTRIFIPTSFLLVCILHLHYFHDRFLELTDLKSIPNKEDNTIYRLAHPEGSLPDLTMMHLTAKLEKPEVRKLAEPGEEKPEGYSEKAQKGDLGKDSEESEEDGEEEEESEEEEETSDLRNKWHLVIDRLTVLFLKFLEYFHKLQVFMWWILELHIIKIVSSYIIWVSVKEVSLFNYVFLISWAFALPYAKLRRLASSVCTVWTCVIIVCKMLYQLQTIKPENFSVNCSLPNENQTNIPLNELNKSLLYSAPVDPTEWVGLRKSSPLLVYLRNNLLMLAILAFEVTIYRHQEYYRGRNNLTAPVSKTIFHDITRLHLDDGLISCAKYFINYFFYKFGLETCFLMSVNVIGQRMDFYAMIHACWLIAVLYRRRRKAIAEIWPKYCCFLACIITFQYFICIGIPPAPCRDYPWRFKGASFNDNIIKWLYFPDFIVRPNPVFLVYDFMLLLCASLQRQIFEDENKAAVRIMAGDNVEICMNLDAASFSQHNPVPDFIHCRSYLDMSKVIVFSYLFWFVLTIIFITGTTRISIFCMGYLVACFYFLLFGGDLLLKPIKSILRYWDWLIAYNVFVITMKNILSIGACGYIGTLVHNSCWLIQAFSLACTVKGYQMPAANSPCTLPSGEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADIKASQILASRGAELFQATIVKAVKARIEEEKKSMDQLKRQMDRIKARQQKYKKGKERMLSLTQEPGEGQDMQKLSEEDDEREADKQKAKGKKKQWWRPWVDHASMVRSGDYYLFETDSEEEEEEELKKEDEEPPRRSAFQFVYQAWITDPKTALRQRHKEKKRSAREERKRRRKGSKEGPVEWEDREDEPIKKKSDGPDNIIKRIFNILKFTWVLFLATVDSFTTWLNSISREHIDISTVLRIERCMLTREIKKGNVPTRESIHMYYQNHIMNLSRESGLDTIDERPGAASGAQTAHRMDSLDSHDSISSEPTQCTMLYSRQGTTETIEEVEAEQEEEAGSTVPEPREAKEYEAAGYDVGAVGAKEASLTPEEELTQFSTLDGDVEAPPSYSKAVSFEHLSFGSQDDSAGKNHMAVSPDDSRTDKLGSSILPPLTHELTASELLLNKMFHDDELEESEKFYVGQPRFLLLFYAMYNTLVARSEMVCYFVIILNHMVSASMITLLLPILIFLWAMLSVPRPSRRFWMMAIVYTEVAIVVKYFFQFGFFPWNKNAEVNKDK…
SIO_010081: PIEZO2
subclass of: SO_0000673
so part of: PIEZO2
location: complement(join(1721568..1721820,1722734..1722917,1725254..1725333,1727782..1727910,1730216..1730388,1731659..1731751,1732115..1732303,1734339..1734486,1735897..1736055,1740764..1740978,1741082..1741229,1742438..1742570,1743579..1743831,1746922..1747104,1749238..1749496,1750178..1750588,1759630..1759796,1760538..1760704,1763321..1763380,1776042..1776156,1781206..1781312,1785923..1785994,1787356..1787477,1789018..1789107,1793338..1793497,1794951..1795047,1797483..1797726,1803355..1803520,1805011..1805112,1805234..1805438,1806452..1806652,1808037..1808162,1808458..1808634,1817090..1817250,1820505..1820722,1832633..1832806,1834874..1835022,1836916..1837205,1838946..1839069,1843090..1843320,1845976..1846124,1848999..1849137,1850058..1850096,1853835..1853954,1857100..1857262,1906473..1906686,1908096..1908306,1921430..1921592,1954119..1954161,2020017..2020142,2096909..2097004,2182377..2182440))
location: region:1721568-2182440:-1
so has part: feature:2182377-2182440:-1:exon
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so has part: feature:1735897-1736055:-1:exon
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so has part: feature:1731659-1731751:-1:exon
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so has part: feature:1727782-1727910:-1:exon
so has part: feature:1725254-1725333:-1:exon
so has part: feature:1722734-1722917:-1:exon
so has part: feature:1721568-1721820:-1:exon

XP_025221139.1
type: Protein
SIO_000068: ncbiprotein

position:1721568:-1
position: 1721568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2182377-2182440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2096909-2097004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2020017-2020142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1954119-1954161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1921430-1921592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1908096-1908306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1906473-1906686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1857100-1857262:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1853835-1853954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850058-1850096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1848999-1849137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1845976-1846124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1843090-1843320:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1838946-1839069:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1836916-1837205:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1834874-1835022:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1832633-1832806:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1820505-1820722:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1817090-1817250:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1808458-1808634:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1808037-1808162:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1806452-1806652:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1805234-1805438:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1805011-1805112:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1803355-1803520:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1797483-1797726:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1794951-1795047:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1793338-1793497:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1789018-1789107:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1787356-1787477:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1785923-1785994:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1781206-1781312:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1776042-1776156:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1763321-1763380:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1760538-1760704:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1759630-1759796:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1750178-1750588:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1749238-1749496:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1746922-1747104:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1743579-1743831:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1742438-1742570:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1741082-1741229:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1740764-1740978:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1735897-1736055:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1734339-1734486:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1732115-1732303:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1731659-1731751:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1730216-1730388:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1727782-1727910:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1725254-1725333:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1722734-1722917:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1721568-1721820:-1:exon

PIEZO2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PIEZO2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: piezo-type mechanosensitive ion channel component 2 isoform X1
translation: MASEVVCGLIFRLLLPICLAVACAFRYNGLSFVYLIYLLLIPLFSEPTKTTMQGHTGRLLKSLCFISLSFLLLHIIFHITLASLEAQHRIAPGYNCSTWEKTFRQIGFESLKGADAGNGIRVFVPDIGMFIASLTIWLLCRNIVQKPVTDEAAQSNLEFENQELAGGEKIDSEEALIYEEDLDGGDGVEGELEESTRLKMFRRLACVASKLKEFIGNMITTAGKVVVTILLGSSGMMLPSLTSSVYFFVFLGLCTWWSWCRTFDPLLFSCLCVLLAIFTAGHLIGLYLYQFQFFQEAVPPSDYYARLFGIKSVIQTDCSSTWKIIVNPDLSWYHHANPILLLVMYYTLATLIRIWLQEPLVQEERTKEEDKALACSPIQITAERRRSLWYATHYPTDERKLLSMTQDDYKPSDGLLVTVNGNPVDYHTIHPSLPMENGPGKADLYSTPQYRWEPSDESSEKREEEEEEKEEFEEERSREEKRSIKVHAMVSVFQFIMKQSYICALIAMMAWSITYHSWLTFVLLIWSCTLWMIRNRRKYAMISSPFMVVYGNLLLILQYIWSFELPEIKKVPGFLEKKEPGELASKILFTITFWLLLRQHLTEQKALREKEALLSEVKIGSQENEEKDEELQVIQVEGEPKETEEEEEAKEEKQERKKVEEEEVEEEDEQDIMKVLGNLVVAMFIKYWIYVCGGMFFFVSFEGKIVMYKIIYMVLFLFCVALYQVHYEWWRKILKYFWMSVVIYTMLVLIFIYTYQFENFPGLWQNMTGLKKEKLEDLGLKQFTVAELFTRIFIPTSFLLVCILHLHYFHDRFLELTDLKSIPNKEDNTIYSHAKVNGRVYLIINSIKKKLPIHQNELAHPEGSLPDLTMMHLTAKLEKPEVRKLAEPGEEKPEGYSEKAQKGDLGKDSEESEEDGEEEEESEEEEETSDLRNKWHLVIDRLTVLFLKFLEYFHKLQVFMWWILELHIIKIVSSYIIWVSVKEVSLFNYVFLISWAFALPYAKLRRLASSVCTVWTCVIIVCKMLYQLQTIKPENFSVNCSLPNENQTNIPLNELNKSLLYSAPVDPTEWVGLRKSSPLLVYLRNNLLMLAILAFEVTIYRHQEYYRGRNNLTAPVSKTIFHDITRLHLDDGLISCAKYFINYFFYKFGLETCFLMSVNVIGQRMDFYAMIHACWLIAVLYRRRRKAIAEIWPKYCCFLACIITFQYFICIGIPPAPCRDYPWRFKGASFNDNIIKWLYFPDFIVRPNPVFLVYDFMLLLCASLQRQIFEDENKAAVRIMAGDNVEICMNLDAASFSQHNPVPDFIHCRSYLDMSKVIVFSYLFWFVLTIIFITGTTRISIFCMGYLVACFYFLLFGGDLLLKPIKSILRYWDWLIAYNVFVITMKNILSIGACGYIGTLVHNSCWLIQAFSLACTVKGYQMPAANSPCTLPSGEAGIIWDSICFAFLLLQRRVFMSYYFLHVVADIKASQILASRGAELFQATIVKAVKARIEEEKKSMDQLKRQMDRIKARQQKYKKGKERMLSLTQEPGEGQDMQKLSEEDDEREADKQKAKGKKKQWWRPWVDHASMVRSGDYYLFETDSEEEEEEELKKEDEEPPRRSAFQRAIGKFASAILALPKSVIKLPKTILQYLIRAAKFVYQAWITDPKTALRQRHKEKKRSAREERKRRRKGSKEGPVEWEDREDEPIKKKSDGPDNIIKRIFNILKFTWVLFLATVDSFTTWLNSISREHIDISTVLRIERCMLTREIKKGNVPTRESIHMYYQNHIMNLSRESGLDTIDERPGAASGAQTAHRMDSLDSHDSISSCYTEATMLFSRQSTLDDLDGQEIPKTSERARPRLRKMLSMDMSSSSADSGSLASSEPTQCTMLYSRQGTTETIEEVEAEQEEEAGSTVPEPREAKEYEAAGYDVGAVGAKEASLTPEEELTQFSTLDGDVEAPPSYSKAVSFEHLSFGSQDDSAGKNHMAVSPDDSRTDKLGSSILPPLTHELTASELLLN…
SIO_010081: PIEZO2
subclass of: SO_0000673
so part of: PIEZO2
location: complement(join(1721568..1721820,1722734..1722917,1725254..1725333,1727782..1727910,1730216..1730388,1731659..1731751,1732115..1732303,1734339..1734486,1735897..1736055,1740764..1740978,1741082..1741229,1742438..1742570,1743579..1743831,1746922..1747104,1749238..1749496,1750178..1750588,1753104..1753268,1759630..1759796,1760538..1760704,1763321..1763380,1776042..1776156,1779839..1779937,1781206..1781312,1785923..1785994,1787356..1787477,1789018..1789107,1793338..1793497,1794951..1795047,1797483..1797726,1803355..1803520,1805011..1805112,1805234..1805438,1806452..1806652,1808037..1808162,1808458..1808634,1817090..1817250,1820505..1820722,1821095..1821127,1827931..1827972,1832633..1832806,1834874..1835022,1836916..1837205,1838946..1839069,1843090..1843320,1845976..1846124,1848999..1849137,1850058..1850096,1853835..1853954,1857100..1857262,1906473..1906686,1908096..1908306,1921430..1921592,1954119..1954161,2020017..2020142,2096909..2097004,2182377..2182440))
location: region:1721568-2182440:-1
so has part: feature:2182377-2182440:-1:exon
so has part: feature:2096909-2097004:-1:exon
so has part: feature:2020017-2020142:-1:exon
so has part: feature:1954119-1954161:-1:exon
so has part: feature:1921430-1921592:-1:exon
so has part: feature:1908096-1908306:-1:exon
so has part: feature:1906473-1906686:-1:exon
so has part: feature:1857100-1857262:-1:exon
so has part: feature:1853835-1853954:-1:exon
so has part: feature:1850058-1850096:-1:exon
so has part: feature:1848999-1849137:-1:exon
so has part: feature:1845976-1846124:-1:exon
so has part: feature:1843090-1843320:-1:exon
so has part: feature:1838946-1839069:-1:exon
so has part: feature:1836916-1837205:-1:exon
so has part: feature:1834874-1835022:-1:exon
so has part: feature:1832633-1832806:-1:exon
so has part: feature:1827931-1827972:-1:exon
so has part: feature:1821095-1821127:-1:exon
so has part: feature:1820505-1820722:-1:exon
so has part: feature:1817090-1817250:-1:exon
so has part: feature:1808458-1808634:-1:exon
so has part: feature:1808037-1808162:-1:exon
so has part: feature:1806452-1806652:-1:exon
so has part: feature:1805234-1805438:-1:exon
so has part: feature:1805011-1805112:-1:exon
so has part: feature:1803355-1803520:-1:exon
so has part: feature:1797483-1797726:-1:exon
so has part: feature:1794951-1795047:-1:exon
so has part: feature:1793338-1793497:-1:exon
so has part: feature:1789018-1789107:-1:exon
so has part: feature:1787356-1787477:-1:exon
so has part: feature:1785923-1785994:-1:exon
so has part: feature:1781206-1781312:-1:exon
so has part: feature:1779839-1779937:-1:exon
so has part: feature:1776042-1776156:-1:exon
so has part: feature:1763321-1763380:-1:exon
so has part: feature:1760538-1760704:-1:exon
so has part: feature:1759630-1759796:-1:exon
so has part: feature:1753104-1753268:-1:exon
so has part: feature:1750178-1750588:-1:exon
so has part: feature:1749238-1749496:-1:exon
so has part: feature:1746922-1747104:-1:exon
so has part: feature:1743579-1743831:-1:exon
so has part: feature:1742438-1742570:-1:exon
so has part: feature:1741082-1741229:-1:exon
so has part: feature:1740764-1740978:-1:exon
so has part: feature:1735897-1736055:-1:exon
so has part: feature:1734339-1734486:-1:exon
so has part: feature:1732115-1732303:-1:exon
so has part: feature:1731659-1731751:-1:exon
so has part: feature:1730216-1730388:-1:exon
so has part: feature:1727782-1727910:-1:exon
so has part: feature:1725254-1725333:-1:exon
so has part: feature:1722734-1722917:-1:exon
so has part: feature:1721568-1721820:-1:exon

XP_025221138.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2182377-2182440:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2096909-2097004:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2020017-2020142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1954119-1954161:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1921430-1921592:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1908096-1908306:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1906473-1906686:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1857100-1857262:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1853835-1853954:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1850058-1850096:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1848999-1849137:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1845976-1846124:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1843090-1843320:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1838946-1839069:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1836916-1837205:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1834874-1835022:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1832633-1832806:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1827931-1827972:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1821095-1821127:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1820505-1820722:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1817090-1817250:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1808458-1808634:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1808037-1808162:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1806452-1806652:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1805234-1805438:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1805011-1805112:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1803355-1803520:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1797483-1797726:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:1794951-1795047:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:1793338-1793497:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:1789018-1789107:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:1787356-1787477:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:1785923-1785994:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:1781206-1781312:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:1779839-1779937:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:1776042-1776156:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:1763321-1763380:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:1760538-1760704:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:1759630-1759796:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:1753104-1753268:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:1750178-1750588:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:1749238-1749496:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:1746922-1747104:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:1743579-1743831:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:1742438-1742570:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:1741082-1741229:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:1740764-1740978:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:1735897-1736055:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:1734339-1734486:-1:exon

urn:…
SIO_000300: 50
SIO_000628: feature:1732115-1732303:-1:exon

urn:…
SIO_000300: 51
SIO_000628: feature:1731659-1731751:-1:exon

urn:…
SIO_000300: 52
SIO_000628: feature:1730216-1730388:-1:exon

urn:…
SIO_000300: 53
SIO_000628: feature:1727782-1727910:-1:exon

urn:…
SIO_000300: 54
SIO_000628: feature:1725254-1725333:-1:exon

urn:…
SIO_000300: 55
SIO_000628: feature:1722734-1722917:-1:exon

urn:…
SIO_000300: 56
SIO_000628: feature:1721568-1721820:-1:exon

LOC112611478
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611478
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1769627..1772567
location: region:1769627-1772567:1
so has part: feature:1769627-1772567:1:exon

112611478
type: Gene
SIO_000068: ncbigene

position:1769627:1
position: 1769627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1772567:1
position: 1772567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1769627-1772567:1:exon

LOC112611478
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: LOC112611478
product: uncharacterized protein KIAA0895-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 5 Proteins
pseudo: true
transcript id: XR_003116669.1
SIO_010081: LOC112611478
so part of: LOC112611478
location: join(1769627..1770459,1771372..1772567)
location: region:1769627-1772567:1
so has part: feature:1769627-1770459:1:exon
so has part: feature:1771372-1772567:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1769627-1770459:1:exon

position:1770459:1
position: 1770459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1771372-1772567:1:exon

position:1771372:1
position: 1771372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112611479
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611479
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(2147417..2147930)
location: region:2147417-2147930:-1
so has part: feature:2147417-2147930:-1:exon

112611479
type: Gene
SIO_000068: ncbigene

position:2147417:-1
position: 2147417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2147930:-1
position: 2147930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2147417-2147930:-1:exon

LOC112611479
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: LOC112611479
product: 60S ribosomal protein L21 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 16 ESTs, 13 Proteins, and 34% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003116670.1
SIO_010081: LOC112611479
so part of: LOC112611479
location: complement(2147417..2147930)
location: region:2147417-2147930:-1
so has part: feature:2147417-2147930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2147417-2147930:-1:exon

LOC112611687
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611687
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2348927..2349687
location: region:2348927-2349687:1
so has part: feature:2348927-2349687:1:exon

112611687
type: Gene
SIO_000068: ncbigene

position:2348927:1
position: 2348927
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2349687:1
position: 2349687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2348927-2349687:1:exon

LOC112611687
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: LOC112611687
product: enhancer of rudimentary homolog pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 235 ESTs, 7 Proteins, and 75% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003116711.1
SIO_010081: LOC112611687
so part of: LOC112611687
location: 2348927..2349687
location: region:2348927-2349687:1
so has part: feature:2348927-2349687:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2348927-2349687:1:exon

LOC112611284
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611284
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2461635..2472387
location: region:2461635-2472387:1
so has part: feature:2461635-2472387:1:exon
subclass of: SO_0000011

112611284
type: Gene
SIO_000068: ncbigene

position:2461635:1
position: 2461635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2472387:1
position: 2472387
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2461635-2472387:1:exon

LOC112611284
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: lncRNA
gene: LOC112611284
product: uncharacterized LOC112611284
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
transcript id: XR_003116626.1
SIO_010081: LOC112611284
subclass of: SO_0000673
so part of: LOC112611284
location: join(2461635..2461690,2461909..2461995,2471688..2471903,2472261..2472387)
location: region:2461635-2472387:1
so has part: feature:2461635-2461690:1:exon
so has part: feature:2461909-2461995:1:exon
so has part: feature:2471688-2471903:1:exon
so has part: feature:2472261-2472387:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2461635-2461690:1:exon

position:2461690:1
position: 2461690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2461909-2461995:1:exon

position:2461909:1
position: 2461909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2461995:1
position: 2461995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2471688-2471903:1:exon

position:2471688:1
position: 2471688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2471903:1
position: 2471903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2472261-2472387:1:exon

position:2472261:1
position: 2472261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112611652
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611652
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2498187..2516460
location: region:2498187-2516460:1
so has part: feature:2498187-2516460:1:exon
subclass of: SO_0000011

112611652
type: Gene
SIO_000068: ncbigene

position:2498187:1
position: 2498187
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516460:1
position: 2516460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2498187-2516460:1:exon

LOC112611652
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: lncRNA
gene: LOC112611652
product: uncharacterized LOC112611652
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
transcript id: XR_003116702.1
SIO_010081: LOC112611652
subclass of: SO_0000673
so part of: LOC112611652
location: join(2498187..2498382,2516014..2516118,2516239..2516460)
location: region:2498187-2516460:1
so has part: feature:2498187-2498382:1:exon
so has part: feature:2516014-2516118:1:exon
so has part: feature:2516239-2516460:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2498187-2498382:1:exon

position:2498382:1
position: 2498382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2516014-2516118:1:exon

position:2516014:1
position: 2516014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2516118:1
position: 2516118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2516239-2516460:1:exon

position:2516239:1
position: 2516239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC112611709
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611709
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2540591..2571443
location: region:2540591-2571443:1
so has part: feature:2540591-2571443:1:exon

112611709
type: Gene
SIO_000068: ncbigene

position:2540591:1
position: 2540591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2571443:1
position: 2571443
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2540591-2571443:1:exon

LOC112611709
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC112611709
subclass of: SO_0000673
so part of: LOC112611709
location: 2540591..2540626
location: region:2540591-2540626:1
so has part: feature:2540591-2540626:1:exon

position:2540626:1
position: 2540626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2540591-2540626:1:exon

LOC112611709
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC112611709
subclass of: SO_0000673
so part of: LOC112611709
location: 2543163..2543379
location: region:2543163-2543379:1
so has part: feature:2543163-2543379:1:exon

position:2543163:1
position: 2543163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2543379:1
position: 2543379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2543163-2543379:1:exon

LOC112611709
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC112611709
subclass of: SO_0000673
so part of: LOC112611709
location: 2557232..2558306
location: region:2557232-2558306:1
so has part: feature:2557232-2558306:1:exon

position:2557232:1
position: 2557232
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2558306:1
position: 2558306
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2557232-2558306:1:exon

LOC112611709
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC112611709
subclass of: SO_0000673
so part of: LOC112611709
location: 2569410..2569544
location: region:2569410-2569544:1
so has part: feature:2569410-2569544:1:exon

position:2569410:1
position: 2569410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2569544:1
position: 2569544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2569410-2569544:1:exon

LOC112611709
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC112611709
subclass of: SO_0000673
so part of: LOC112611709
location: 2570445..2570593
location: region:2570445-2570593:1
so has part: feature:2570445-2570593:1:exon

position:2570445:1
position: 2570445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2570593:1
position: 2570593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2570445-2570593:1:exon

LOC112611709
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611709
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins
pseudo: true
SIO_010081: LOC112611709
subclass of: SO_0000673
so part of: LOC112611709
location: 2571207..2571443
location: region:2571207-2571443:1
so has part: feature:2571207-2571443:1:exon

position:2571207:1
position: 2571207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2571207-2571443:1:exon

GNAL
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: GNAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2643901..2844981
location: region:2643901-2844981:1
so has part: feature:2643901-2844981:1:exon
subclass of: SO_0000010

112611291
type: Gene
SIO_000068: ncbigene

position:2643901:1
position: 2643901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2844981:1
position: 2844981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2643901-2844981:1:exon

GNAL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: GNAL
product: G protein subunit alpha L, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 183 ESTs, 12 Proteins, and 22% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364963.1
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2643901..2644638,2712796..2712868,2713566..2713620,2713761..2713880,2786554..2786651,2824703..2824757,2826855..2826928,2829435..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2844981)
location: region:2643901-2844981:1
so has part: feature:2643901-2644638:1:exon
so has part: feature:2712796-2712868:1:exon
so has part: feature:2713566-2713620:1:exon
so has part: feature:2713761-2713880:1:exon
so has part: feature:2786554-2786651:1:exon
so has part: feature:2824703-2824757:1:exon
so has part: feature:2826855-2826928:1:exon
so has part: feature:2829435-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2844981:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2643901-2644638:1:exon

position:2644638:1
position: 2644638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2712796-2712868:1:exon

position:2712796:1
position: 2712796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2712868:1
position: 2712868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2713566-2713620:1:exon

position:2713566:1
position: 2713566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713620:1
position: 2713620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2713761-2713880:1:exon

position:2713761:1
position: 2713761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2713880:1
position: 2713880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2786554-2786651:1:exon

position:2786554:1
position: 2786554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2786651:1
position: 2786651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2824703-2824757:1:exon

position:2824703:1
position: 2824703
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2824757:1
position: 2824757
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2826855-2826928:1:exon

position:2826855:1
position: 2826855
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2826928:1
position: 2826928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2829435-2829493:1:exon

position:2829435:1
position: 2829435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2829493:1
position: 2829493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2830498-2830618:1:exon

position:2830498:1
position: 2830498
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2830618:1
position: 2830618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2834331-2834461:1:exon

position:2834331:1
position: 2834331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2834461:1
position: 2834461
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2836256-2836323:1:exon

position:2836256:1
position: 2836256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2836323:1
position: 2836323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2840614-2844981:1:exon

position:2840614:1
position: 2840614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GNAL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: GNAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(olf) subunit alpha isoform X1
translation: MGLCYSLRPLLFGGPGDDPCAASEPPVQDTQPAPAPAPVRAAARDTARTSLPRGGGGSPACARPKADKPKEKRQRTEQLSAEEREAAKEARKVSRGIDRMLREQKRDLQQTHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGEGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2644287..2644638,2712796..2712868,2713566..2713620,2713761..2713880,2786554..2786651,2824703..2824757,2826855..2826928,2829435..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2840760)
location: region:2644287-2840760:1
so has part: feature:2644287-2644638:1:exon
so has part: feature:2712796-2712868:1:exon
so has part: feature:2713566-2713620:1:exon
so has part: feature:2713761-2713880:1:exon
so has part: feature:2786554-2786651:1:exon
so has part: feature:2824703-2824757:1:exon
so has part: feature:2826855-2826928:1:exon
so has part: feature:2829435-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2840760:1:exon

XP_025220748.1
type: Protein
SIO_000068: ncbiprotein

position:2644287:1
position: 2644287
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2840760:1
position: 2840760
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2644287-2644638:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2712796-2712868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713566-2713620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713761-2713880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2786554-2786651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2824703-2824757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2826855-2826928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2829435-2829493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2830498-2830618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2834331-2834461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2836256-2836323:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2840614-2840760:1:exon

LOC112611403
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2670369..2707619
location: region:2670369-2707619:1
so has part: feature:2670369-2707619:1:exon

112611403
type: Gene
SIO_000068: ncbigene

position:2670369:1
position: 2670369
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2707619:1
position: 2707619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2670369-2707619:1:exon

LOC112611403
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC112611403
subclass of: SO_0000673
so part of: LOC112611403
location: 2670369..2670723
location: region:2670369-2670723:1
so has part: feature:2670369-2670723:1:exon

position:2670723:1
position: 2670723
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2670369-2670723:1:exon

LOC112611403
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC112611403
subclass of: SO_0000673
so part of: LOC112611403
location: 2705985..2706018
location: region:2705985-2706018:1
so has part: feature:2705985-2706018:1:exon

position:2705985:1
position: 2705985
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706018:1
position: 2706018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2705985-2706018:1:exon

LOC112611403
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC112611403
subclass of: SO_0000673
so part of: LOC112611403
location: 2706148..2706332
location: region:2706148-2706332:1
so has part: feature:2706148-2706332:1:exon

position:2706148:1
position: 2706148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2706332:1
position: 2706332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2706148-2706332:1:exon

LOC112611403
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611403
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC112611403
subclass of: SO_0000673
so part of: LOC112611403
location: 2706670..2707619
location: region:2706670-2707619:1
so has part: feature:2706670-2707619:1:exon

position:2706670:1
position: 2706670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2706670-2707619:1:exon

GNAL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: GNAL
product: G protein subunit alpha L, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 167 ESTs, 30 Proteins, and 24% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364966.1
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2711415..2711451,2712275..2712521,2712796..2712868,2713566..2713620,2713761..2713880,2786554..2786651,2824703..2824757,2826855..2826928,2829435..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2844981)
location: region:2711415-2844981:1
so has part: feature:2711415-2711451:1:exon
so has part: feature:2712275-2712521:1:exon
so has part: feature:2712796-2712868:1:exon
so has part: feature:2713566-2713620:1:exon
so has part: feature:2713761-2713880:1:exon
so has part: feature:2786554-2786651:1:exon
so has part: feature:2824703-2824757:1:exon
so has part: feature:2826855-2826928:1:exon
so has part: feature:2829435-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2844981:1:exon

position:2711415:1
position: 2711415
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711415-2711451:1:exon

position:2711451:1
position: 2711451
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2712275-2712521:1:exon

position:2712275:1
position: 2712275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2712521:1
position: 2712521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2712796-2712868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713566-2713620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2713761-2713880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2786554-2786651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2824703-2824757:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2826855-2826928:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2829435-2829493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2830498-2830618:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2834331-2834461:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2836256-2836323:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2840614-2844981:1:exon

GNAL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: GNAL
product: G protein subunit alpha L, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 168 ESTs, 30 Proteins, and 23% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364965.1
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2711487..2711649,2712275..2712521,2712796..2712868,2713566..2713620,2713761..2713880,2786554..2786651,2824703..2824757,2826855..2826928,2829435..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2844981)
location: region:2711487-2844981:1
so has part: feature:2711487-2711649:1:exon
so has part: feature:2712275-2712521:1:exon
so has part: feature:2712796-2712868:1:exon
so has part: feature:2713566-2713620:1:exon
so has part: feature:2713761-2713880:1:exon
so has part: feature:2786554-2786651:1:exon
so has part: feature:2824703-2824757:1:exon
so has part: feature:2826855-2826928:1:exon
so has part: feature:2829435-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2844981:1:exon

position:2711487:1
position: 2711487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2711487-2711649:1:exon

position:2711649:1
position: 2711649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2712275-2712521:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2712796-2712868:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713566-2713620:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2713761-2713880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2786554-2786651:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2824703-2824757:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2826855-2826928:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2829435-2829493:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2830498-2830618:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2834331-2834461:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2836256-2836323:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2840614-2844981:1:exon

GNAL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: GNAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(olf) subunit alpha isoform X2
translation: MGCLGGNSKTTEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGEGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2712377..2712521,2712796..2712868,2713566..2713620,2713761..2713880,2786554..2786651,2824703..2824757,2826855..2826928,2829435..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2840760)
location: region:2712377-2840760:1
so has part: feature:2712377-2712521:1:exon
so has part: feature:2712796-2712868:1:exon
so has part: feature:2713566-2713620:1:exon
so has part: feature:2713761-2713880:1:exon
so has part: feature:2786554-2786651:1:exon
so has part: feature:2824703-2824757:1:exon
so has part: feature:2826855-2826928:1:exon
so has part: feature:2829435-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2840760:1:exon

XP_025220750.1
type: Protein
SIO_000068: ncbiprotein

position:2712377:1
position: 2712377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2712377-2712521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2712796-2712868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713566-2713620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713761-2713880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2786554-2786651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2824703-2824757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2826855-2826928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2829435-2829493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2830498-2830618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2834331-2834461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2836256-2836323:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2840614-2840760:1:exon

GNAL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: GNAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(olf) subunit alpha isoform X2
translation: MGCLGGNSKTTEDQGVDEKERREANKKIEKQLQKERLAYKATHRLLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYIKSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGEGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2712377..2712521,2712796..2712868,2713566..2713620,2713761..2713880,2786554..2786651,2824703..2824757,2826855..2826928,2829435..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2840760)
location: region:2712377-2840760:1
so has part: feature:2712377-2712521:1:exon
so has part: feature:2712796-2712868:1:exon
so has part: feature:2713566-2713620:1:exon
so has part: feature:2713761-2713880:1:exon
so has part: feature:2786554-2786651:1:exon
so has part: feature:2824703-2824757:1:exon
so has part: feature:2826855-2826928:1:exon
so has part: feature:2829435-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2840760:1:exon

XP_025220751.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2712377-2712521:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2712796-2712868:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2713566-2713620:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2713761-2713880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2786554-2786651:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2824703-2824757:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2826855-2826928:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2829435-2829493:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2830498-2830618:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2834331-2834461:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2836256-2836323:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2840614-2840760:1:exon

CHMP1B
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: CHMP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2814399..2817442
location: region:2814399-2817442:1
so has part: feature:2814399-2817442:1:exon
subclass of: SO_0000010

112611293
type: Gene
SIO_000068: ncbigene

position:2814399:1
position: 2814399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2817442:1
position: 2817442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2814399-2817442:1:exon

CHMP1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: CHMP1B
product: charged multivesicular body protein 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 252 ESTs, 11 Proteins, and 86% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364974.1
SIO_010081: CHMP1B
subclass of: SO_0000673
so part of: CHMP1B
location: 2814399..2817442
location: region:2814399-2817442:1
so has part: feature:2814399-2817442:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2814399-2817442:1:exon

CHMP1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: CHMP1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 1b
translation: MSNMEKHLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQNQVDMLLQEMADEAGLDLNMELPQGQTGSVGTSVASAEQDELSQRLARLRDQV
SIO_010081: CHMP1B
subclass of: SO_0000673
so part of: CHMP1B
location: 2814515..2815114
location: region:2814515-2815114:1
so has part: feature:2814515-2815114:1:exon

XP_025220759.1
type: Protein
SIO_000068: ncbiprotein

position:2814515:1
position: 2814515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2815114:1
position: 2815114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2814515-2815114:1:exon

GNAL
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: GNAL
product: G protein subunit alpha L, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 159 ESTs, 5 Proteins, and 25% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364967.1
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2819704..2820048,2824703..2824757,2826855..2826928,2829435..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2844981)
location: region:2819704-2844981:1
so has part: feature:2819704-2820048:1:exon
so has part: feature:2824703-2824757:1:exon
so has part: feature:2826855-2826928:1:exon
so has part: feature:2829435-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2844981:1:exon

position:2819704:1
position: 2819704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2819704-2820048:1:exon

position:2820048:1
position: 2820048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2824703-2824757:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2826855-2826928:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2829435-2829493:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2830498-2830618:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2834331-2834461:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2836256-2836323:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2840614-2844981:1:exon

GNAL
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: GNAL
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: guanine nucleotide-binding protein G(olf) subunit alpha isoform X3
translation: MFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGEGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL
SIO_010081: GNAL
subclass of: SO_0000673
so part of: GNAL
location: join(2829436..2829493,2830498..2830618,2834331..2834461,2836256..2836323,2840614..2840760)
location: region:2829436-2840760:1
so has part: feature:2829436-2829493:1:exon
so has part: feature:2830498-2830618:1:exon
so has part: feature:2834331-2834461:1:exon
so has part: feature:2836256-2836323:1:exon
so has part: feature:2840614-2840760:1:exon

XP_025220752.1
type: Protein
SIO_000068: ncbiprotein

position:2829436:1
position: 2829436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2829436-2829493:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2830498-2830618:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2834331-2834461:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2836256-2836323:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2840614-2840760:1:exon

MPPE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: MPPE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2842787..2869095)
location: region:2842787-2869095:-1
so has part: feature:2842787-2869095:-1:exon
subclass of: SO_0000010

112611292
type: Gene
SIO_000068: ncbigene

position:2842787:-1
position: 2842787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2869095:-1
position: 2869095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2842787-2869095:-1:exon

MPPE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 208 ESTs, 1 Protein, and 66% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364971.1
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2842787..2843942,2844977..2845117,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857652,2866329..2866435,2868295..2869095))
location: region:2842787-2869095:-1
so has part: feature:2868295-2869095:-1:exon
so has part: feature:2866329-2866435:-1:exon
so has part: feature:2857280-2857652:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2842787-2843942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2868295-2869095:-1:exon

position:2868295:-1
position: 2868295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866329-2866435:-1:exon

position:2866329:-1
position: 2866329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2866435:-1
position: 2866435
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2857280-2857652:-1:exon

position:2857280:-1
position: 2857280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2857652:-1
position: 2857652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2853509-2853617:-1:exon

position:2853509:-1
position: 2853509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2853617:-1
position: 2853617
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2849249-2849352:-1:exon

position:2849249:-1
position: 2849249
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2849352:-1
position: 2849352
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2848530-2848604:-1:exon

position:2848530:-1
position: 2848530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2848604:-1
position: 2848604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2846217-2846325:-1:exon

position:2846217:-1
position: 2846217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2846325:-1
position: 2846325
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2844977-2845117:-1:exon

position:2844977:-1
position: 2844977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2845117:-1
position: 2845117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2842787-2843942:-1:exon

position:2843942:-1
position: 2843942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MPPE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 121 ESTs, 1 Protein, and 68% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364972.1
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2842794..2843942,2844977..2845117,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857652,2868295..2869095))
location: region:2842794-2869095:-1
so has part: feature:2868295-2869095:-1:exon
so has part: feature:2857280-2857652:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2842794-2843942:-1:exon

position:2842794:-1
position: 2842794
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2868295-2869095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2857280-2857652:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
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urn:…
SIO_000300: 8
SIO_000628: feature:2842794-2843942:-1:exon

MPPE1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 107 ESTs, 2 Proteins, and 59% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_003116630.1
SIO_010081: MPPE1
so part of: MPPE1
location: complement(join(2842794..2843942,2844203..2844366,2844977..2845117,2845803..2845925,2846017..2846082,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2855489..2855581,2857280..2857427,2866329..2866435,2868295..2869095))
location: region:2842794-2869095:-1
so has part: feature:2868295-2869095:-1:exon
so has part: feature:2866329-2866435:-1:exon
so has part: feature:2857280-2857427:-1:exon
so has part: feature:2855489-2855581:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2846017-2846082:-1:exon
so has part: feature:2845803-2845925:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2844203-2844366:-1:exon
so has part: feature:2842794-2843942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2868295-2869095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866329-2866435:-1:exon

urn:…
SIO_000300: 3
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position:2857427:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:2855489-2855581:-1:exon

position:2855489:-1
position: 2855489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2855581:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2848530-2848604:-1:exon

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SIO_000300: 8
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2846017-2846082:-1:exon

position:2846017:-1
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reference: sequence
type: ReverseStrandPosition
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position:2846082:-1
position: 2846082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2845803-2845925:-1:exon

position:2845803:-1
position: 2845803
reference: sequence
type: ReverseStrandPosition
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position:2845925:-1
position: 2845925
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2844203-2844366:-1:exon

position:2844203:-1
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reference: sequence
type: ReverseStrandPosition
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position:2844366:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2842794-2843942:-1:exon

MPPE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 216 ESTs, 1 Protein, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364970.1
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2842794..2843942,2844977..2845117,2845803..2845925,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857652,2866329..2866435,2868295..2869095))
location: region:2842794-2869095:-1
so has part: feature:2868295-2869095:-1:exon
so has part: feature:2866329-2866435:-1:exon
so has part: feature:2857280-2857652:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2845803-2845925:-1:exon
so has part: feature:2844977-2845117:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2868295-2869095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866329-2866435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2857280-2857652:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2842794-2843942:-1:exon

MPPE1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 216 ESTs, 3 Proteins, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_003116629.1
SIO_010081: MPPE1
so part of: MPPE1
location: complement(join(2842794..2843942,2844203..2844366,2844977..2845117,2845803..2845925,2846017..2846082,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857652,2866329..2866435,2868295..2869095))
location: region:2842794-2869095:-1
so has part: feature:2868295-2869095:-1:exon
so has part: feature:2866329-2866435:-1:exon
so has part: feature:2857280-2857652:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2868295-2869095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866329-2866435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2857280-2857652:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2846017-2846082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2844203-2844366:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2842794-2843942:-1:exon

MPPE1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 214 ESTs, 1 Protein, and 64% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XR_003116628.1
SIO_010081: MPPE1
so part of: MPPE1
location: complement(join(2842794..2843942,2844203..2844366,2844977..2845117,2845803..2845925,2846017..2846085,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857652,2866329..2866435,2868295..2869095))
location: region:2842794-2869095:-1
so has part: feature:2868295-2869095:-1:exon
so has part: feature:2866329-2866435:-1:exon
so has part: feature:2857280-2857652:-1:exon
so has part: feature:2853509-2853617:-1:exon
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so has part: feature:2848530-2848604:-1:exon
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so has part: feature:2846017-2846085:-1:exon
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urn:…
SIO_000300: 1
SIO_000628: feature:2868295-2869095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866329-2866435:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 5
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urn:…
SIO_000300: 7
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2846017-2846085:-1:exon

position:2846085:-1
position: 2846085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2844203-2844366:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2842794-2843942:-1:exon

MPPE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 220 ESTs, 9 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364969.1
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2843019..2843942,2844977..2845117,2845803..2845925,2846017..2846082,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857652,2866329..2866435,2868295..2869095))
location: region:2843019-2869095:-1
so has part: feature:2868295-2869095:-1:exon
so has part: feature:2866329-2866435:-1:exon
so has part: feature:2857280-2857652:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2846017-2846082:-1:exon
so has part: feature:2845803-2845925:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2843019-2843942:-1:exon

position:2843019:-1
position: 2843019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2868295-2869095:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2866329-2866435:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2857280-2857652:-1:exon

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SIO_000300: 4
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2846017-2846082:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2843019-2843942:-1:exon

MPPE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MPPE1
product: metallophosphoesterase 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 119 ESTs, 3 Proteins, and 72% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364968.1
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2843019..2843942,2844977..2845117,2845803..2845925,2846017..2846085,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857652,2857817..2857909,2866365..2866435,2868225..2869095))
location: region:2843019-2869095:-1
so has part: feature:2868225-2869095:-1:exon
so has part: feature:2866365-2866435:-1:exon
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so has part: feature:2857280-2857652:-1:exon
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so has part: feature:2844977-2845117:-1:exon
so has part: feature:2843019-2843942:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2868225-2869095:-1:exon

position:2868225:-1
position: 2868225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2866365-2866435:-1:exon

position:2866365:-1
position: 2866365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2857817-2857909:-1:exon

position:2857817:-1
position: 2857817
reference: sequence
type: ReverseStrandPosition
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position:2857909:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 4
SIO_000628: feature:2857280-2857652:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2853509-2853617:-1:exon

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SIO_000300: 6
SIO_000628: feature:2849249-2849352:-1:exon

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SIO_000300: 7
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2846017-2846085:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2843019-2843942:-1:exon

MPPE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MPPE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metallophosphoesterase 1 isoform X4
translation: MAMIEVGFERQNFHPLKRKSALLLKLIAVVFAVLLFCEFLIYYLVIFQCNWPEVKTTAYDGEQASREPVLKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWLLQPEVVFILGDVFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNTYKVERFEKVFSSERLFSWKGINFVMVNSVALNGDGCGICSEAEAELIEVSHRLNCSRELLWWLQPRLVLSGHTHSACEVHHGGRVPELSVPSFSWRNRNNPSFIMGSITPTDYALSKCYLPREDVVLVIYCGAVGFLVVLTLSHLGLLASPFLSGLNLLRKRKTR
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2843760..2843942,2844977..2845117,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857560))
location: region:2843760-2857560:-1
so has part: feature:2857280-2857560:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2843760-2843942:-1:exon

XP_025220756.1
type: Protein
SIO_000068: ncbiprotein

position:2843760:-1
position: 2843760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2857560:-1
position: 2857560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2857280-2857560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2843760-2843942:-1:exon

MPPE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MPPE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metallophosphoesterase 1 isoform X4
translation: MAMIEVGFERQNFHPLKRKSALLLKLIAVVFAVLLFCEFLIYYLVIFQCNWPEVKTTAYDGEQASREPVLKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWLLQPEVVFILGDVFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNTYKVERFEKVFSSERLFSWKGINFVMVNSVALNGDGCGICSEAEAELIEVSHRLNCSRELLWWLQPRLVLSGHTHSACEVHHGGRVPELSVPSFSWRNRNNPSFIMGSITPTDYALSKCYLPREDVVLVIYCGAVGFLVVLTLSHLGLLASPFLSGLNLLRKRKTR
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2843760..2843942,2844977..2845117,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857560))
location: region:2843760-2857560:-1
so has part: feature:2857280-2857560:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2843760-2843942:-1:exon

XP_025220757.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2857280-2857560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2843760-2843942:-1:exon

MPPE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MPPE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metallophosphoesterase 1 isoform X3
translation: MAMIEVGFERQNFHPLKRKSALLLKLIAVVFAVLLFCEFLIYYLVIFQCNWPEVKTTAYDGEQASREPVLKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWLLQPEVVFILGDVFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNTYKVERFEKVFSSERLFSWKGINFVMVNSVALNGDGCGICSEAEAELIEVSHRLNCSREHYPLYRRSDANCSGEDAAPPEERDIPFKENYDVLSREASQKLLWWLQPRLVLSGHTHSACEVHHGGRVPELSVPSFSWRNRNNPSFIMGSITPTDYALSKCYLPREDVVLVIYCGAVGFLVVLTLSHLGLLASPFLSGLNLLRKRKTR
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2843760..2843942,2844977..2845117,2845803..2845925,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857560))
location: region:2843760-2857560:-1
so has part: feature:2857280-2857560:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2845803-2845925:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2843760-2843942:-1:exon

XP_025220755.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2857280-2857560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2843760-2843942:-1:exon

MPPE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MPPE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metallophosphoesterase 1 isoform X2
translation: MAMIEVGFERQNFHPLKRKSALLLKLIAVVFAVLLFCEFLIYYLVIFQCNWPEVKTTAYDGEQASREPVLKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWLLQPEVVFILGDVFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNTYKVERFEKVFSSERLFSWKGINFVMVNSVALNGDGCGICSEAEAELIEVSHRLNCSREAHGSRRCGPGPLLPVSAPVLLQHYPLYRRSDANCSGEDAAPPEERDIPFKENYDVLSREASQKLLWWLQPRLVLSGHTHSACEVHHGGRVPELSVPSFSWRNRNNPSFIMGSITPTDYALSKCYLPREDVVLVIYCGAVGFLVVLTLSHLGLLASPFLSGLNLLRKRKTR
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2843760..2843942,2844977..2845117,2845803..2845925,2846017..2846082,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857560))
location: region:2843760-2857560:-1
so has part: feature:2857280-2857560:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2846017-2846082:-1:exon
so has part: feature:2845803-2845925:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2843760-2843942:-1:exon

XP_025220754.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2857280-2857560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2846017-2846082:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2843760-2843942:-1:exon

MPPE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MPPE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: metallophosphoesterase 1 isoform X1
translation: MAMIEVGFERQNFHPLKRKSALLLKLIAVVFAVLLFCEFLIYYLVIFQCNWPEVKTTAYDGEQASREPVLKAMFLADTHLLGEFLGHWLDKLRREWQMERAFQTALWLLQPEVVFILGDVFDEGKWSTPEAWADDVERFQKMFRHPSHVQLKVVAGNHDIGFHYEMNTYKVERFEKVFSSERLFSWKGINFVMVNSVALNGDGCGICSEAEAELIEVSHRLNCSREQAHGSRRCGPGPLLPVSAPVLLQHYPLYRRSDANCSGEDAAPPEERDIPFKENYDVLSREASQKLLWWLQPRLVLSGHTHSACEVHHGGRVPELSVPSFSWRNRNNPSFIMGSITPTDYALSKCYLPREDVVLVIYCGAVGFLVVLTLSHLGLLASPFLSGLNLLRKRKTR
SIO_010081: MPPE1
subclass of: SO_0000673
so part of: MPPE1
location: complement(join(2843760..2843942,2844977..2845117,2845803..2845925,2846017..2846085,2846217..2846325,2848530..2848604,2849249..2849352,2853509..2853617,2857280..2857560))
location: region:2843760-2857560:-1
so has part: feature:2857280-2857560:-1:exon
so has part: feature:2853509-2853617:-1:exon
so has part: feature:2849249-2849352:-1:exon
so has part: feature:2848530-2848604:-1:exon
so has part: feature:2846217-2846325:-1:exon
so has part: feature:2846017-2846085:-1:exon
so has part: feature:2845803-2845925:-1:exon
so has part: feature:2844977-2845117:-1:exon
so has part: feature:2843760-2843942:-1:exon

XP_025220753.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2857280-2857560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2853509-2853617:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2849249-2849352:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2848530-2848604:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2846217-2846325:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2846017-2846085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2845803-2845925:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2844977-2845117:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2843760-2843942:-1:exon

IMPA2
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: IMPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2926021..2977038
location: region:2926021-2977038:1
so has part: feature:2926021-2977038:1:exon
subclass of: SO_0000010

112611343
type: Gene
SIO_000068: ncbigene

position:2926021:1
position: 2926021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2977038:1
position: 2977038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926021-2977038:1:exon

IMPA2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: IMPA2
product: inositol monophosphatase 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 229 ESTs, 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365050.1
SIO_010081: IMPA2
subclass of: SO_0000673
so part of: IMPA2
location: join(2926021..2926373,2944591..2944724,2955585..2955689,2958178..2958223,2960237..2960345,2972646..2972754,2973450..2973601,2976504..2977038)
location: region:2926021-2977038:1
so has part: feature:2926021-2926373:1:exon
so has part: feature:2944591-2944724:1:exon
so has part: feature:2955585-2955689:1:exon
so has part: feature:2958178-2958223:1:exon
so has part: feature:2960237-2960345:1:exon
so has part: feature:2972646-2972754:1:exon
so has part: feature:2973450-2973601:1:exon
so has part: feature:2976504-2977038:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2926021-2926373:1:exon

position:2926373:1
position: 2926373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2944591-2944724:1:exon

position:2944591:1
position: 2944591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2944724:1
position: 2944724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2955585-2955689:1:exon

position:2955585:1
position: 2955585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2955689:1
position: 2955689
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2958178-2958223:1:exon

position:2958178:1
position: 2958178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2958223:1
position: 2958223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2960237-2960345:1:exon

position:2960237:1
position: 2960237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2960345:1
position: 2960345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2972646-2972754:1:exon

position:2972646:1
position: 2972646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2972754:1
position: 2972754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2973450-2973601:1:exon

position:2973450:1
position: 2973450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2973601:1
position: 2973601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2976504-2977038:1:exon

position:2976504:1
position: 2976504
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

IMPA2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: IMPA2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: inositol monophosphatase 2
translation: MKPSGEDQAAPAAGPWEECFQAAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHNPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYHCTEERLYTGRRGGGAFCNGQRLRVSGETDLSKALVLTEIGPKRDPATLKLFLSNMERLLHAKAHGVRVIGSSTLALCHLASGAADAYYQFGLHCWDLAAATVIIREAGGIVIDTSGGPLDLMACRVVAASTREMAMLIAQALQTINYGRDDEK
SIO_010081: IMPA2
subclass of: SO_0000673
so part of: IMPA2
location: join(2926278..2926373,2944591..2944724,2955585..2955689,2958178..2958223,2960237..2960345,2972646..2972754,2973450..2973601,2976504..2976619)
location: region:2926278-2976619:1
so has part: feature:2926278-2926373:1:exon
so has part: feature:2944591-2944724:1:exon
so has part: feature:2955585-2955689:1:exon
so has part: feature:2958178-2958223:1:exon
so has part: feature:2960237-2960345:1:exon
so has part: feature:2972646-2972754:1:exon
so has part: feature:2973450-2973601:1:exon
so has part: feature:2976504-2976619:1:exon

XP_025220835.1
type: Protein
SIO_000068: ncbiprotein

position:2926278:1
position: 2926278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2976619:1
position: 2976619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2926278-2926373:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2944591-2944724:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2955585-2955689:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2958178-2958223:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2960237-2960345:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2972646-2972754:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2973450-2973601:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2976504-2976619:1:exon

NAPG
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: NAPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2986796..3012416)
location: region:2986796-3012416:-1
so has part: feature:2986796-3012416:-1:exon
subclass of: SO_0000010

112611344
type: Gene
SIO_000068: ncbigene

position:2986796:-1
position: 2986796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012416:-1
position: 3012416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2986796-3012416:-1:exon

NAPG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: NAPG
product: NSF attachment protein gamma
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 153 ESTs, 9 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365051.1
SIO_010081: NAPG
subclass of: SO_0000673
so part of: NAPG
location: complement(join(2986796..2987223,2988043..2988172,2988785..2988864,2990743..2990821,2996921..2996991,2997266..2997332,2997447..2997556,3003796..3003826,3004740..3004757,3005495..3005579,3007733..3007800,3012115..3012416))
location: region:2986796-3012416:-1
so has part: feature:3012115-3012416:-1:exon
so has part: feature:3007733-3007800:-1:exon
so has part: feature:3005495-3005579:-1:exon
so has part: feature:3004740-3004757:-1:exon
so has part: feature:3003796-3003826:-1:exon
so has part: feature:2997447-2997556:-1:exon
so has part: feature:2997266-2997332:-1:exon
so has part: feature:2996921-2996991:-1:exon
so has part: feature:2990743-2990821:-1:exon
so has part: feature:2988785-2988864:-1:exon
so has part: feature:2988043-2988172:-1:exon
so has part: feature:2986796-2987223:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3012115-3012416:-1:exon

position:3012115:-1
position: 3012115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3007733-3007800:-1:exon

position:3007733:-1
position: 3007733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3007800:-1
position: 3007800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3005495-3005579:-1:exon

position:3005495:-1
position: 3005495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3005579:-1
position: 3005579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3004740-3004757:-1:exon

position:3004740:-1
position: 3004740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3004757:-1
position: 3004757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3003796-3003826:-1:exon

position:3003796:-1
position: 3003796
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3003826:-1
position: 3003826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2997447-2997556:-1:exon

position:2997447:-1
position: 2997447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2997556:-1
position: 2997556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2997266-2997332:-1:exon

position:2997266:-1
position: 2997266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2997332:-1
position: 2997332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2996921-2996991:-1:exon

position:2996921:-1
position: 2996921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2996991:-1
position: 2996991
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2990743-2990821:-1:exon

position:2990743:-1
position: 2990743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2990821:-1
position: 2990821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2988785-2988864:-1:exon

position:2988785:-1
position: 2988785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2988864:-1
position: 2988864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2988043-2988172:-1:exon

position:2988043:-1
position: 2988043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2988172:-1
position: 2988172
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2986796-2987223:-1:exon

position:2987223:-1
position: 2987223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NAPG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: NAPG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-soluble NSF attachment protein
translation: MAAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGFNGSEDCAALEQLLEGYDQQDQDQVSDVCNSPLFKYMDNDYAKLGLSLVVPGGGIKKKSPATPQAKPDGVTATAADEEEDEYSGGLC
SIO_010081: NAPG
subclass of: SO_0000673
so part of: NAPG
location: complement(join(2987080..2987223,2988043..2988172,2988785..2988864,2990743..2990821,2996921..2996991,2997266..2997332,2997447..2997556,3003796..3003826,3004740..3004757,3005495..3005579,3007733..3007800,3012115..3012170))
location: region:2987080-3012170:-1
so has part: feature:3012115-3012170:-1:exon
so has part: feature:3007733-3007800:-1:exon
so has part: feature:3005495-3005579:-1:exon
so has part: feature:3004740-3004757:-1:exon
so has part: feature:3003796-3003826:-1:exon
so has part: feature:2997447-2997556:-1:exon
so has part: feature:2997266-2997332:-1:exon
so has part: feature:2996921-2996991:-1:exon
so has part: feature:2990743-2990821:-1:exon
so has part: feature:2988785-2988864:-1:exon
so has part: feature:2988043-2988172:-1:exon
so has part: feature:2987080-2987223:-1:exon

XP_025220836.1
type: Protein
SIO_000068: ncbiprotein

position:2987080:-1
position: 2987080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3012170:-1
position: 3012170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3012115-3012170:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3007733-3007800:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3005495-3005579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3004740-3004757:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3003796-3003826:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2997447-2997556:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2997266-2997332:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2996921-2996991:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2990743-2990821:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2988785-2988864:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2988043-2988172:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2987080-2987223:-1:exon

APCDD1
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: APCDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3049225..3083398)
location: region:3049225-3083398:-1
so has part: feature:3049225-3083398:-1:exon
subclass of: SO_0000010

112611634
type: Gene
SIO_000068: ncbigene

position:3049225:-1
position: 3049225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3083398:-1
position: 3083398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3049225-3083398:-1:exon

APCDD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: APCDD1
product: APC down-regulated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 226 ESTs, 3 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365607.1
SIO_010081: APCDD1
subclass of: SO_0000673
so part of: APCDD1
location: complement(join(3049225..3050337,3052124..3052445,3065880..3066411,3069289..3069472,3082987..3083398))
location: region:3049225-3083398:-1
so has part: feature:3082987-3083398:-1:exon
so has part: feature:3069289-3069472:-1:exon
so has part: feature:3065880-3066411:-1:exon
so has part: feature:3052124-3052445:-1:exon
so has part: feature:3049225-3050337:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3082987-3083398:-1:exon

position:3082987:-1
position: 3082987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3069289-3069472:-1:exon

position:3069289:-1
position: 3069289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3069472:-1
position: 3069472
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3065880-3066411:-1:exon

position:3065880:-1
position: 3065880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3066411:-1
position: 3066411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3052124-3052445:-1:exon

position:3052124:-1
position: 3052124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3052445:-1
position: 3052445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3049225-3050337:-1:exon

position:3050337:-1
position: 3050337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

APCDD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: APCDD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein APCDD1
translation: MSWPRRLLLRYLFPALLLHGLGEGSALLHPDSRSHPRSLEKSAWRAFKESQCHHMLKHLHNGARITVQMPPTIEGHWVSTGCEVRSGPEFITRSYRFYHNNTFKAYQFYYGSNRCTNPTYTLIIRGKIRLRQASWIIRGGTEADYQLHNVQVICHTEAVAEKLGQQVNRTCPGFLADGGPWVQDVTYDLWREENGCECTKAVNFAMHELQLIRVEKQYLHHNLDHLVEELFLGDIHTDATQRMFYRPSSYQPPLQNAKNHDHACIACRIIYRSDEHHPPILPPKADLTIGLHGEWVSQRCEVRPEVLFLTRHFIFHDNNNTWEGHYYHYSDPVCKHPTFSIYARGRYSRGVLSSRVMGGTEFVFKVNHMKVTPMDAATASLLNVFNGNECGAEGSWQVGIQQDVTHTNGCVALGIKLPHTEYEIFKMEQDARGRYLLFNGQRPSDGSSPDRPEKRATSYQMPLVQCASSSPRAEDLAEDGGSRLYGRAPGRHTWPLLLAALACLVSLLHWNIRR
SIO_010081: APCDD1
subclass of: SO_0000673
so part of: APCDD1
location: complement(join(3049889..3050337,3052124..3052445,3065880..3066411,3069289..3069472,3082987..3083044))
location: region:3049889-3083044:-1
so has part: feature:3082987-3083044:-1:exon
so has part: feature:3069289-3069472:-1:exon
so has part: feature:3065880-3066411:-1:exon
so has part: feature:3052124-3052445:-1:exon
so has part: feature:3049889-3050337:-1:exon

XP_025221392.1
type: Protein
SIO_000068: ncbiprotein

position:3049889:-1
position: 3049889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3083044:-1
position: 3083044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3082987-3083044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3069289-3069472:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3065880-3066411:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3052124-3052445:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3049889-3050337:-1:exon

LOC112611762
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611762
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3147160..3147262
location: region:3147160-3147262:1
so has part: feature:3147160-3147262:1:exon
subclass of: SO_0000578

112611762
type: Gene
SIO_000068: ncbigene

position:3147160:1
position: 3147160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3147262:1
position: 3147262
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3147160-3147262:1:exon

LOC112611762
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: snoRNA
gene: LOC112611762
product: small nucleolar RNA U13
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003116740.1
SIO_010081: LOC112611762
subclass of: SO_0000673
so part of: LOC112611762
location: 3147160..3147262
location: region:3147160-3147262:1
so has part: feature:3147160-3147262:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3147160-3147262:1:exon

VAPA
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: VAPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3580734..3623271)
location: region:3580734-3623271:-1
so has part: feature:3580734-3623271:-1:exon
subclass of: SO_0000010

112611296
type: Gene
SIO_000068: ncbigene

position:3580734:-1
position: 3580734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3623271:-1
position: 3623271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3580734-3623271:-1:exon

VAPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: VAPA
product: VAMP associated protein A, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 720 ESTs, 2 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364980.1
SIO_010081: VAPA
subclass of: SO_0000673
so part of: VAPA
location: complement(join(3580734..3583389,3586885..3587058,3592749..3592883,3600401..3600481,3601219..3601322,3604908..3605060,3622579..3623271))
location: region:3580734-3623271:-1
so has part: feature:3622579-3623271:-1:exon
so has part: feature:3604908-3605060:-1:exon
so has part: feature:3601219-3601322:-1:exon
so has part: feature:3600401-3600481:-1:exon
so has part: feature:3592749-3592883:-1:exon
so has part: feature:3586885-3587058:-1:exon
so has part: feature:3580734-3583389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3622579-3623271:-1:exon

position:3622579:-1
position: 3622579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3604908-3605060:-1:exon

position:3604908:-1
position: 3604908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3605060:-1
position: 3605060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3601219-3601322:-1:exon

position:3601219:-1
position: 3601219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3601322:-1
position: 3601322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3600401-3600481:-1:exon

position:3600401:-1
position: 3600401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3600481:-1
position: 3600481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3592749-3592883:-1:exon

position:3592749:-1
position: 3592749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3592883:-1
position: 3592883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3586885-3587058:-1:exon

position:3586885:-1
position: 3586885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3587058:-1
position: 3587058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3580734-3583389:-1:exon

position:3583389:-1
position: 3583389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VAPA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: VAPA
product: VAMP associated protein A, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 706 ESTs, 13 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364981.1
SIO_010081: VAPA
subclass of: SO_0000673
so part of: VAPA
location: complement(join(3582619..3583389,3586885..3587058,3600401..3600481,3601219..3601322,3604908..3605060,3622579..3623271))
location: region:3582619-3623271:-1
so has part: feature:3622579-3623271:-1:exon
so has part: feature:3604908-3605060:-1:exon
so has part: feature:3601219-3601322:-1:exon
so has part: feature:3600401-3600481:-1:exon
so has part: feature:3586885-3587058:-1:exon
so has part: feature:3582619-3583389:-1:exon

position:3582619:-1
position: 3582619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622579-3623271:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3604908-3605060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3601219-3601322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3600401-3600481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3586885-3587058:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3582619-3583389:-1:exon

VAPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: VAPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein-associated protein A isoform X2
translation: MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLNDMEPSKTVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL
SIO_010081: VAPA
subclass of: SO_0000673
so part of: VAPA
location: complement(join(3583231..3583389,3586885..3587058,3600401..3600481,3601219..3601322,3604908..3605060,3622579..3622657))
location: region:3583231-3622657:-1
so has part: feature:3622579-3622657:-1:exon
so has part: feature:3604908-3605060:-1:exon
so has part: feature:3601219-3601322:-1:exon
so has part: feature:3600401-3600481:-1:exon
so has part: feature:3586885-3587058:-1:exon
so has part: feature:3583231-3583389:-1:exon

XP_025220766.1
type: Protein
SIO_000068: ncbiprotein

position:3583231:-1
position: 3583231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3622657:-1
position: 3622657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3622579-3622657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3604908-3605060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3601219-3601322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3600401-3600481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3586885-3587058:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3583231-3583389:-1:exon

VAPA
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: VAPA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vesicle-associated membrane protein-associated protein A isoform X1
translation: MASASGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVMLQPFDYDPNEKSKHKFMVQTIFAPPNTSDMEAVWKEAKPDELMDSKLRCVFEMPNENDKLGITPPGNAPTVTSMSSINNTVATPASYHTKDDPRELSVLKQEKQKNDMEPSKTVPLNASKQDGPMPKPHSVSLNDTETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPSLLVVIAAIFIGFFLGKFIL
SIO_010081: VAPA
subclass of: SO_0000673
so part of: VAPA
location: complement(join(3583231..3583389,3586885..3587058,3592749..3592883,3600401..3600481,3601219..3601322,3604908..3605060,3622579..3622657))
location: region:3583231-3622657:-1
so has part: feature:3622579-3622657:-1:exon
so has part: feature:3604908-3605060:-1:exon
so has part: feature:3601219-3601322:-1:exon
so has part: feature:3600401-3600481:-1:exon
so has part: feature:3592749-3592883:-1:exon
so has part: feature:3586885-3587058:-1:exon
so has part: feature:3583231-3583389:-1:exon

XP_025220765.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3622579-3622657:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3604908-3605060:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3601219-3601322:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3600401-3600481:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3592749-3592883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3586885-3587058:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3583231-3583389:-1:exon

TXNDC2
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: TXNDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3647445..3649016)
location: region:3647445-3649016:-1
so has part: feature:3647445-3649016:-1:exon
subclass of: SO_0000010

112611545
type: Gene
SIO_000068: ncbigene

position:3647445:-1
position: 3647445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3649016:-1
position: 3649016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3647445-3649016:-1:exon

TXNDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TXNDC2
product: thioredoxin domain containing 2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 8 Proteins
transcript id: XM_025365481.1
SIO_010081: TXNDC2
subclass of: SO_0000673
so part of: TXNDC2
location: complement(join(3647445..3648383,3648675..3649016))
location: region:3647445-3649016:-1
so has part: feature:3648675-3649016:-1:exon
so has part: feature:3647445-3648383:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3648675-3649016:-1:exon

position:3648675:-1
position: 3648675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3647445-3648383:-1:exon

position:3648383:-1
position: 3648383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TXNDC2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TXNDC2
product: thioredoxin domain containing 2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 4 Proteins
transcript id: XM_025365482.1
SIO_010081: TXNDC2
subclass of: SO_0000673
so part of: TXNDC2
location: complement(join(3647445..3648379,3648874..3648980))
location: region:3647445-3648980:-1
so has part: feature:3648874-3648980:-1:exon
so has part: feature:3647445-3648379:-1:exon

position:3648980:-1
position: 3648980
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3648874-3648980:-1:exon

position:3648874:-1
position: 3648874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3647445-3648379:-1:exon

position:3648379:-1
position: 3648379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TXNDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TXNDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin domain-containing protein 2 isoform X1
translation: MDVDKELVMETVKAGAPGKPEMRLGSQEETNEGDANESSLQVLSSNVPLLALEFLDTVQAKEKAFLPMVSHTFHMPTEESGAPQEGDDLPKSSANTSHPKQGDIPKSPEETIQPTEGDICKSPEETNQSKKDDLPKSSEEVIKPKEGDIPKSSAKPIQSKLGNIPKSSMKPIQSKEDDSPKSLEEAIQPKEGDIPKSPEEAIQPKEDDSTKSVEETIPPKEGDILKPEEETTEFLEGDNVKVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIKPFFHALSMKHEDVVFLEVDADDCEEVVRDCAIMCVPTFQFYKKEEKVDEFCGALKEKLEAVIAELK
SIO_010081: TXNDC2
subclass of: SO_0000673
so part of: TXNDC2
location: complement(join(3647461..3648383,3648675..3648783))
location: region:3647461-3648783:-1
so has part: feature:3648675-3648783:-1:exon
so has part: feature:3647461-3648383:-1:exon

XP_025221266.1
type: Protein
SIO_000068: ncbiprotein

position:3647461:-1
position: 3647461
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3648783:-1
position: 3648783
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3648675-3648783:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3647461-3648383:-1:exon

TXNDC2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TXNDC2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: thioredoxin domain-containing protein 2 isoform X2
translation: MVSHTFHMPTEESGAPQEGDDLPKSSANTSHPKQGDIPKSPEETIQPTEGDICKSPEETNQSKKDDLPKSSEEVIKPKEGDIPKSSAKPIQSKLGNIPKSSMKPIQSKEDDSPKSLEEAIQPKEGDIPKSPEEAIQPKEDDSTKSVEETIPPKEGDILKPEEETTEFLEGDNVKVILSKEDFEASLKEAGERLVAVDFSATWCGPCRTIKPFFHALSMKHEDVVFLEVDADDCEEVVRDCAIMCVPTFQFYKKEEKVDEFCGALKEKLEAVIAELK
SIO_010081: TXNDC2
subclass of: SO_0000673
so part of: TXNDC2
location: complement(3647461..3648291)
location: region:3647461-3648291:-1
so has part: feature:3647461-3648291:-1:exon

XP_025221267.1
type: Protein
SIO_000068: ncbiprotein

position:3648291:-1
position: 3648291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3647461-3648291:-1:exon

RAB31
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: RAB31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3671652..3820661)
location: region:3671652-3820661:-1
so has part: feature:3671652-3820661:-1:exon
subclass of: SO_0000010

112611285
type: Gene
SIO_000068: ncbigene

position:3671652:-1
position: 3671652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3820661:-1
position: 3820661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3671652-3820661:-1:exon

RAB31
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: RAB31
product: RAB31, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 mRNAs, 691 ESTs, 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364959.1
SIO_010081: RAB31
subclass of: SO_0000673
so part of: RAB31
location: complement(join(3671652..3675014,3688716..3688825,3718533..3718639,3719665..3719736,3742230..3742311,3758374..3758453,3820136..3820661))
location: region:3671652-3820661:-1
so has part: feature:3820136-3820661:-1:exon
so has part: feature:3758374-3758453:-1:exon
so has part: feature:3742230-3742311:-1:exon
so has part: feature:3719665-3719736:-1:exon
so has part: feature:3718533-3718639:-1:exon
so has part: feature:3688716-3688825:-1:exon
so has part: feature:3671652-3675014:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3820136-3820661:-1:exon

position:3820136:-1
position: 3820136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3758374-3758453:-1:exon

position:3758374:-1
position: 3758374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3758453:-1
position: 3758453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3742230-3742311:-1:exon

position:3742230:-1
position: 3742230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3742311:-1
position: 3742311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3719665-3719736:-1:exon

position:3719665:-1
position: 3719665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3719736:-1
position: 3719736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3718533-3718639:-1:exon

position:3718533:-1
position: 3718533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3718639:-1
position: 3718639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3688716-3688825:-1:exon

position:3688716:-1
position: 3688716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3688825:-1
position: 3688825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3671652-3675014:-1:exon

position:3675014:-1
position: 3675014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB31
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: RAB31
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-31
translation: MMAIRELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAKEYAESIGAIVVETSAKNAINIEELFQGISRQIPPLDPHENGNNGIKLVKPTSQASRRCC
SIO_010081: RAB31
subclass of: SO_0000673
so part of: RAB31
location: complement(join(3674920..3675014,3688716..3688825,3718533..3718639,3719665..3719736,3742230..3742311,3758374..3758453,3820136..3820174))
location: region:3674920-3820174:-1
so has part: feature:3820136-3820174:-1:exon
so has part: feature:3758374-3758453:-1:exon
so has part: feature:3742230-3742311:-1:exon
so has part: feature:3719665-3719736:-1:exon
so has part: feature:3718533-3718639:-1:exon
so has part: feature:3688716-3688825:-1:exon
so has part: feature:3674920-3675014:-1:exon

XP_025220744.1
type: Protein
SIO_000068: ncbiprotein

position:3674920:-1
position: 3674920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3820174:-1
position: 3820174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3820136-3820174:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3758374-3758453:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3742230-3742311:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3719665-3719736:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3718533-3718639:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3688716-3688825:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3674920-3675014:-1:exon

LOC112611287
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611287
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(3770974..3771764)
location: region:3770974-3771764:-1
so has part: feature:3770974-3771764:-1:exon

112611287
type: Gene
SIO_000068: ncbigene

position:3770974:-1
position: 3770974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3771764:-1
position: 3771764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3770974-3771764:-1:exon

LOC112611287
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: LOC112611287
product: cyclin-dependent kinases regulatory subunit 1 pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 190 ESTs, 9 Proteins, and 58% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003116627.1
SIO_010081: LOC112611287
so part of: LOC112611287
location: complement(3770974..3771764)
location: region:3770974-3771764:-1
so has part: feature:3770974-3771764:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3770974-3771764:-1:exon

LOC112611286
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611286
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3793456..3794219
location: region:3793456-3794219:1
so has part: feature:3793456-3794219:1:exon

112611286
type: Gene
SIO_000068: ncbigene

position:3793456:1
position: 3793456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3794219:1
position: 3794219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3793456-3794219:1:exon

LOC112611286
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611286
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC112611286
subclass of: SO_0000673
so part of: LOC112611286
location: 3793456..3793744
location: region:3793456-3793744:1
so has part: feature:3793456-3793744:1:exon

position:3793744:1
position: 3793744
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3793456-3793744:1:exon

LOC112611286
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611286
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins
pseudo: true
SIO_010081: LOC112611286
subclass of: SO_0000673
so part of: LOC112611286
location: 3794067..3794219
location: region:3794067-3794219:1
so has part: feature:3794067-3794219:1:exon

position:3794067:1
position: 3794067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3794067-3794219:1:exon

LOC112611710
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611710
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3850148..3850908
location: region:3850148-3850908:1
so has part: feature:3850148-3850908:1:exon

112611710
type: Gene
SIO_000068: ncbigene

position:3850148:1
position: 3850148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3850908:1
position: 3850908
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3850148-3850908:1:exon

LOC112611710
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611710
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC112611710
subclass of: SO_0000673
so part of: LOC112611710
location: 3850148..3850908
location: region:3850148-3850908:1
so has part: feature:3850148-3850908:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3850148-3850908:1:exon

LOC112611711
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3893739..3917988)
location: region:3893739-3917988:-1
so has part: feature:3893739-3917988:-1:exon
subclass of: SO_0000010

112611711
type: Gene
SIO_000068: ncbigene

position:3893739:-1
position: 3893739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3917988:-1
position: 3917988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3893739-3917988:-1:exon

LOC112611711
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: LOC112611711
product: uncharacterized LOC112611711
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, and 39% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365699.1
SIO_010081: LOC112611711
subclass of: SO_0000673
so part of: LOC112611711
location: complement(join(3893739..3893865,3913182..3913390,3915234..3915374,3917511..3917887,3917979..3917988))
location: region:3893739-3917988:-1
so has part: feature:3917979-3917988:-1:exon
so has part: feature:3917511-3917887:-1:exon
so has part: feature:3915234-3915374:-1:exon
so has part: feature:3913182-3913390:-1:exon
so has part: feature:3893739-3893865:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3917979-3917988:-1:exon

position:3917979:-1
position: 3917979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3917511-3917887:-1:exon

position:3917511:-1
position: 3917511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3917887:-1
position: 3917887
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3915234-3915374:-1:exon

position:3915234:-1
position: 3915234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3915374:-1
position: 3915374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3913182-3913390:-1:exon

position:3913182:-1
position: 3913182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3913390:-1
position: 3913390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3893739-3893865:-1:exon

position:3893865:-1
position: 3893865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC112611711
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: LOC112611711
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC112611711
translation: MERRPGPAAGGAAPGRLGPRPRLPPPAPLRGSRATGAPASRLPRSRPGPGPAARAHTLGPSRPHAERCGRGRANCRRPGPCGECRNPAGRGLPRTGRFIGSPASPTALQAAAISAGAPLVARAPSPGLHLEDDRAVCCPWSEHTGGLNCYPVLPLKCVKYRRSVPQVIFLKASSNYELNTAPRMQQNLNSVPRSSATAPSFFASAFSEQNSASCWNHYCKLSIKENKPSFPYPLCSLLPCFSQCSRSVLATNEHGLELVGVFFPVFGSPPVATMSPILYSACLCLED
SIO_010081: LOC112611711
subclass of: SO_0000673
so part of: LOC112611711
location: complement(join(3893739..3893865,3913182..3913390,3915234..3915374,3917511..3917887,3917979..3917988))
location: region:3893739-3917988:-1
so has part: feature:3917979-3917988:-1:exon
so has part: feature:3917511-3917887:-1:exon
so has part: feature:3915234-3915374:-1:exon
so has part: feature:3913182-3913390:-1:exon
so has part: feature:3893739-3893865:-1:exon

XP_025221484.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3917979-3917988:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3917511-3917887:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3915234-3915374:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3913182-3913390:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3893739-3893865:-1:exon

LOC112611806
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611806
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 3914460..3914566
location: region:3914460-3914566:1
so has part: feature:3914460-3914566:1:exon
subclass of: SO_0000623

112611806
type: Gene
SIO_000068: ncbigene

position:3914460:1
position: 3914460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3914566:1
position: 3914566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3914460-3914566:1:exon

LOC112611806
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: snRNA
gene: LOC112611806
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003116767.1
SIO_010081: LOC112611806
subclass of: SO_0000673
so part of: LOC112611806
location: 3914460..3914566
location: region:3914460-3914566:1
so has part: feature:3914460-3914566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3914460-3914566:1:exon

PPP4R1
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: PPP4R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3917919..3989168
location: region:3917919-3989168:1
so has part: feature:3917919-3989168:1:exon
subclass of: SO_0000010

112611346
type: Gene
SIO_000068: ncbigene

position:3917919:1
position: 3917919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3989168:1
position: 3989168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3917919-3989168:1:exon

PPP4R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PPP4R1
product: protein phosphatase 4 regulatory subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 472 ESTs, 6 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365052.1
SIO_010081: PPP4R1
subclass of: SO_0000673
so part of: PPP4R1
location: join(3917919..3918042,3918248..3918292,3939608..3939743,3940872..3940978,3945904..3946046,3946538..3946684,3949901..3950008,3950137..3950202,3951178..3951336,3957525..3957652,3964678..3965204,3971780..3971952,3973251..3973346,3976166..3976351,3978267..3978428,3982542..3982642,3985546..3985666,3985755..3985889,3986591..3986732,3988001..3989168)
location: region:3917919-3989168:1
so has part: feature:3917919-3918042:1:exon
so has part: feature:3918248-3918292:1:exon
so has part: feature:3939608-3939743:1:exon
so has part: feature:3940872-3940978:1:exon
so has part: feature:3945904-3946046:1:exon
so has part: feature:3946538-3946684:1:exon
so has part: feature:3949901-3950008:1:exon
so has part: feature:3950137-3950202:1:exon
so has part: feature:3951178-3951336:1:exon
so has part: feature:3957525-3957652:1:exon
so has part: feature:3964678-3965204:1:exon
so has part: feature:3971780-3971952:1:exon
so has part: feature:3973251-3973346:1:exon
so has part: feature:3976166-3976351:1:exon
so has part: feature:3978267-3978428:1:exon
so has part: feature:3982542-3982642:1:exon
so has part: feature:3985546-3985666:1:exon
so has part: feature:3985755-3985889:1:exon
so has part: feature:3986591-3986732:1:exon
so has part: feature:3988001-3989168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3917919-3918042:1:exon

position:3918042:1
position: 3918042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3918248-3918292:1:exon

position:3918248:1
position: 3918248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3918292:1
position: 3918292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3939608-3939743:1:exon

position:3939608:1
position: 3939608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3939743:1
position: 3939743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3940872-3940978:1:exon

position:3940872:1
position: 3940872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3940978:1
position: 3940978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3945904-3946046:1:exon

position:3945904:1
position: 3945904
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3946046:1
position: 3946046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3946538-3946684:1:exon

position:3946538:1
position: 3946538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3946684:1
position: 3946684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3949901-3950008:1:exon

position:3949901:1
position: 3949901
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3950008:1
position: 3950008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3950137-3950202:1:exon

position:3950137:1
position: 3950137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3950202:1
position: 3950202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3951178-3951336:1:exon

position:3951178:1
position: 3951178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3951336:1
position: 3951336
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3957525-3957652:1:exon

position:3957525:1
position: 3957525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3957652:1
position: 3957652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3964678-3965204:1:exon

position:3964678:1
position: 3964678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3965204:1
position: 3965204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:3971780-3971952:1:exon

position:3971780:1
position: 3971780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3971952:1
position: 3971952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:3973251-3973346:1:exon

position:3973251:1
position: 3973251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3973346:1
position: 3973346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:3976166-3976351:1:exon

position:3976166:1
position: 3976166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3976351:1
position: 3976351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:3978267-3978428:1:exon

position:3978267:1
position: 3978267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3978428:1
position: 3978428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:3982542-3982642:1:exon

position:3982542:1
position: 3982542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3982642:1
position: 3982642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:3985546-3985666:1:exon

position:3985546:1
position: 3985546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3985666:1
position: 3985666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:3985755-3985889:1:exon

position:3985755:1
position: 3985755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3985889:1
position: 3985889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:3986591-3986732:1:exon

position:3986591:1
position: 3986591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3986732:1
position: 3986732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:3988001-3989168:1:exon

position:3988001:1
position: 3988001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP4R1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PPP4R1
product: protein phosphatase 4 regulatory subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 mRNAs, 481 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365053.1
SIO_010081: PPP4R1
subclass of: SO_0000673
so part of: PPP4R1
location: join(3917919..3918042,3918248..3918292,3939659..3939743,3940872..3940978,3945904..3946046,3946538..3946684,3949901..3950008,3950137..3950202,3951178..3951336,3957525..3957652,3964678..3965204,3971780..3971952,3973251..3973346,3976166..3976351,3978267..3978428,3982542..3982642,3985546..3985666,3985755..3985889,3986591..3986732,3988001..3989168)
location: region:3917919-3989168:1
so has part: feature:3917919-3918042:1:exon
so has part: feature:3918248-3918292:1:exon
so has part: feature:3939659-3939743:1:exon
so has part: feature:3940872-3940978:1:exon
so has part: feature:3945904-3946046:1:exon
so has part: feature:3946538-3946684:1:exon
so has part: feature:3949901-3950008:1:exon
so has part: feature:3950137-3950202:1:exon
so has part: feature:3951178-3951336:1:exon
so has part: feature:3957525-3957652:1:exon
so has part: feature:3964678-3965204:1:exon
so has part: feature:3971780-3971952:1:exon
so has part: feature:3973251-3973346:1:exon
so has part: feature:3976166-3976351:1:exon
so has part: feature:3978267-3978428:1:exon
so has part: feature:3982542-3982642:1:exon
so has part: feature:3985546-3985666:1:exon
so has part: feature:3985755-3985889:1:exon
so has part: feature:3986591-3986732:1:exon
so has part: feature:3988001-3989168:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3917919-3918042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3918248-3918292:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3939659-3939743:1:exon

position:3939659:1
position: 3939659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3940872-3940978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3945904-3946046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3946538-3946684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3949901-3950008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3950137-3950202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3951178-3951336:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3957525-3957652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3964678-3965204:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3971780-3971952:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3973251-3973346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3976166-3976351:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3978267-3978428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3982542-3982642:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3985546-3985666:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3985755-3985889:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3986591-3986732:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3988001-3989168:1:exon

PPP4R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PPP4R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X1
translation: MADLSLLQEDLQEDADGFAVDDYSSESDVVIIPSALDFVSQDEMLTPLGRLDKYAASENVFNRQMVARSLLDTLREVCDDERDCIAVLERISRLADDSEPTVRAELMEQVPHIALFCQENRPSIPYAFSKFLLPIVVRYLADQNNQVRKTSQAALLALLEQELIERFDVETKVCPVLIELTAPDSNDDVKTEAVAIMCKMAPMVGKDITERLILPRFCEMCCDCRMFHVRKVCAANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATCQEIRRTKLSALFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEESKSSEEMSVENKNRTRDEEAPEDVQVRPEDTPSDLSVSNSSVILENTLEDRAAEASGEPLGEISVPLDSSVLCTLSSESHQEAASNENDKKPGNYKSMLRPEVGTSSQDSALLDQELYNSFHFWRTPLPEIDLDIELEQNSGGKPSPEGPEEASEGPVPSSPNITMATRKELEEMIENLEPHIDDPDVKAQVEVLSAALRASSLDVHEETISVEKRSDLQDELGINELPNCKINQEDSVPLISDAVENMDSTLHYIHNDSDLSNNSSFSPDEERRTKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYSLPGVALTLGRQNWHCLRETYETLASDMQWKVRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKDLDEVRIGVLKHLHDFLKLLHIDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSVRWISYKLVSEMVKKLHAATPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCLPMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKDYFLASASCHQEAVEQTIMALQMDRDSDVKYFASIHPASTKISEDAMSTASSTY
SIO_010081: PPP4R1
subclass of: SO_0000673
so part of: PPP4R1
location: join(3918036..3918042,3918248..3918292,3939608..3939743,3940872..3940978,3945904..3946046,3946538..3946684,3949901..3950008,3950137..3950202,3951178..3951336,3957525..3957652,3964678..3965204,3971780..3971952,3973251..3973346,3976166..3976351,3978267..3978428,3982542..3982642,3985546..3985666,3985755..3985889,3986591..3986732,3988001..3988164)
location: region:3918036-3988164:1
so has part: feature:3918036-3918042:1:exon
so has part: feature:3918248-3918292:1:exon
so has part: feature:3939608-3939743:1:exon
so has part: feature:3940872-3940978:1:exon
so has part: feature:3945904-3946046:1:exon
so has part: feature:3946538-3946684:1:exon
so has part: feature:3949901-3950008:1:exon
so has part: feature:3950137-3950202:1:exon
so has part: feature:3951178-3951336:1:exon
so has part: feature:3957525-3957652:1:exon
so has part: feature:3964678-3965204:1:exon
so has part: feature:3971780-3971952:1:exon
so has part: feature:3973251-3973346:1:exon
so has part: feature:3976166-3976351:1:exon
so has part: feature:3978267-3978428:1:exon
so has part: feature:3982542-3982642:1:exon
so has part: feature:3985546-3985666:1:exon
so has part: feature:3985755-3985889:1:exon
so has part: feature:3986591-3986732:1:exon
so has part: feature:3988001-3988164:1:exon

XP_025220837.1
type: Protein
SIO_000068: ncbiprotein

position:3918036:1
position: 3918036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3988164:1
position: 3988164
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3918036-3918042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3918248-3918292:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3939608-3939743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3940872-3940978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3945904-3946046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3946538-3946684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3949901-3950008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3950137-3950202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3951178-3951336:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3957525-3957652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3964678-3965204:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3971780-3971952:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3973251-3973346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3976166-3976351:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3978267-3978428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3982542-3982642:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3985546-3985666:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3985755-3985889:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3986591-3986732:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3988001-3988164:1:exon

PPP4R1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PPP4R1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein phosphatase 4 regulatory subunit 1 isoform X2
translation: MADLSLLQEDLQEDADGSLDFVSQDEMLTPLGRLDKYAASENVFNRQMVARSLLDTLREVCDDERDCIAVLERISRLADDSEPTVRAELMEQVPHIALFCQENRPSIPYAFSKFLLPIVVRYLADQNNQVRKTSQAALLALLEQELIERFDVETKVCPVLIELTAPDSNDDVKTEAVAIMCKMAPMVGKDITERLILPRFCEMCCDCRMFHVRKVCAANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATCQEIRRTKLSALFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEESKSSEEMSVENKNRTRDEEAPEDVQVRPEDTPSDLSVSNSSVILENTLEDRAAEASGEPLGEISVPLDSSVLCTLSSESHQEAASNENDKKPGNYKSMLRPEVGTSSQDSALLDQELYNSFHFWRTPLPEIDLDIELEQNSGGKPSPEGPEEASEGPVPSSPNITMATRKELEEMIENLEPHIDDPDVKAQVEVLSAALRASSLDVHEETISVEKRSDLQDELGINELPNCKINQEDSVPLISDAVENMDSTLHYIHNDSDLSNNSSFSPDEERRTKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYSLPGVALTLGRQNWHCLRETYETLASDMQWKVRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKDLDEVRIGVLKHLHDFLKLLHIDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSVRWISYKLVSEMVKKLHAATPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCLPMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKDYFLASASCHQEAVEQTIMALQMDRDSDVKYFASIHPASTKISEDAMSTASSTY
SIO_010081: PPP4R1
subclass of: SO_0000673
so part of: PPP4R1
location: join(3918036..3918042,3918248..3918292,3939659..3939743,3940872..3940978,3945904..3946046,3946538..3946684,3949901..3950008,3950137..3950202,3951178..3951336,3957525..3957652,3964678..3965204,3971780..3971952,3973251..3973346,3976166..3976351,3978267..3978428,3982542..3982642,3985546..3985666,3985755..3985889,3986591..3986732,3988001..3988164)
location: region:3918036-3988164:1
so has part: feature:3918036-3918042:1:exon
so has part: feature:3918248-3918292:1:exon
so has part: feature:3939659-3939743:1:exon
so has part: feature:3940872-3940978:1:exon
so has part: feature:3945904-3946046:1:exon
so has part: feature:3946538-3946684:1:exon
so has part: feature:3949901-3950008:1:exon
so has part: feature:3950137-3950202:1:exon
so has part: feature:3951178-3951336:1:exon
so has part: feature:3957525-3957652:1:exon
so has part: feature:3964678-3965204:1:exon
so has part: feature:3971780-3971952:1:exon
so has part: feature:3973251-3973346:1:exon
so has part: feature:3976166-3976351:1:exon
so has part: feature:3978267-3978428:1:exon
so has part: feature:3982542-3982642:1:exon
so has part: feature:3985546-3985666:1:exon
so has part: feature:3985755-3985889:1:exon
so has part: feature:3986591-3986732:1:exon
so has part: feature:3988001-3988164:1:exon

XP_025220838.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3918036-3918042:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3918248-3918292:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3939659-3939743:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3940872-3940978:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3945904-3946046:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3946538-3946684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3949901-3950008:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3950137-3950202:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3951178-3951336:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3957525-3957652:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3964678-3965204:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:3971780-3971952:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:3973251-3973346:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:3976166-3976351:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:3978267-3978428:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:3982542-3982642:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:3985546-3985666:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:3985755-3985889:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:3986591-3986732:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:3988001-3988164:1:exon

RALBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: RALBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3990693..4054685)
location: region:3990693-4054685:-1
so has part: feature:3990693-4054685:-1:exon
subclass of: SO_0000010

112611499
type: Gene
SIO_000068: ncbigene

position:3990693:-1
position: 3990693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4054685:-1
position: 4054685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3990693-4054685:-1:exon

RALBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: RALBP1
product: ralA binding protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 330 ESTs, 3 Proteins, and 81% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365399.1
SIO_010081: RALBP1
subclass of: SO_0000673
so part of: RALBP1
location: complement(join(3990693..3993150,3994736..3994859,3995106..3995227,3997597..3997704,4002638..4002769,4003700..4003861,4006236..4006585,4011797..4012255,4016281..4016579,4053897..4054685))
location: region:3990693-4054685:-1
so has part: feature:4053897-4054685:-1:exon
so has part: feature:4016281-4016579:-1:exon
so has part: feature:4011797-4012255:-1:exon
so has part: feature:4006236-4006585:-1:exon
so has part: feature:4003700-4003861:-1:exon
so has part: feature:4002638-4002769:-1:exon
so has part: feature:3997597-3997704:-1:exon
so has part: feature:3995106-3995227:-1:exon
so has part: feature:3994736-3994859:-1:exon
so has part: feature:3990693-3993150:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4053897-4054685:-1:exon

position:4053897:-1
position: 4053897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4016281-4016579:-1:exon

position:4016281:-1
position: 4016281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016579:-1
position: 4016579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4011797-4012255:-1:exon

position:4011797:-1
position: 4011797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4012255:-1
position: 4012255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4006236-4006585:-1:exon

position:4006236:-1
position: 4006236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4006585:-1
position: 4006585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4003700-4003861:-1:exon

position:4003700:-1
position: 4003700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4003861:-1
position: 4003861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4002638-4002769:-1:exon

position:4002638:-1
position: 4002638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4002769:-1
position: 4002769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3997597-3997704:-1:exon

position:3997597:-1
position: 3997597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3997704:-1
position: 3997704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3995106-3995227:-1:exon

position:3995106:-1
position: 3995106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3995227:-1
position: 3995227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3994736-3994859:-1:exon

position:3994736:-1
position: 3994736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3994859:-1
position: 3994859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3990693-3993150:-1:exon

position:3993150:-1
position: 3993150
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RALBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: RALBP1
product: ralA binding protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 338 ESTs, 3 Proteins, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365398.1
SIO_010081: RALBP1
subclass of: SO_0000673
so part of: RALBP1
location: complement(join(3990693..3993150,3994736..3994859,3995106..3995227,3997597..3997704,4002638..4002769,4003700..4003861,4006236..4006585,4011797..4012255,4016281..4016579,4053383..4053579))
location: region:3990693-4053579:-1
so has part: feature:4053383-4053579:-1:exon
so has part: feature:4016281-4016579:-1:exon
so has part: feature:4011797-4012255:-1:exon
so has part: feature:4006236-4006585:-1:exon
so has part: feature:4003700-4003861:-1:exon
so has part: feature:4002638-4002769:-1:exon
so has part: feature:3997597-3997704:-1:exon
so has part: feature:3995106-3995227:-1:exon
so has part: feature:3994736-3994859:-1:exon
so has part: feature:3990693-3993150:-1:exon

position:4053579:-1
position: 4053579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4053383-4053579:-1:exon

position:4053383:-1
position: 4053383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4016281-4016579:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4011797-4012255:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4006236-4006585:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4003700-4003861:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4002638-4002769:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3997597-3997704:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3995106-3995227:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3994736-3994859:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3990693-3993150:-1:exon

RALBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: RALBP1
product: ralA binding protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 324 ESTs, 3 Proteins, and 89% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365400.1
SIO_010081: RALBP1
subclass of: SO_0000673
so part of: RALBP1
location: complement(join(3990693..3993150,3994736..3994859,3995106..3995227,3997597..3997704,4002638..4002769,4003700..4003861,4006236..4006585,4011797..4012255,4016281..4016579,4049628..4049721,4053383..4053522))
location: region:3990693-4053522:-1
so has part: feature:4053383-4053522:-1:exon
so has part: feature:4049628-4049721:-1:exon
so has part: feature:4016281-4016579:-1:exon
so has part: feature:4011797-4012255:-1:exon
so has part: feature:4006236-4006585:-1:exon
so has part: feature:4003700-4003861:-1:exon
so has part: feature:4002638-4002769:-1:exon
so has part: feature:3997597-3997704:-1:exon
so has part: feature:3995106-3995227:-1:exon
so has part: feature:3994736-3994859:-1:exon
so has part: feature:3990693-3993150:-1:exon

position:4053522:-1
position: 4053522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4053383-4053522:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4049628-4049721:-1:exon

position:4049628:-1
position: 4049628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4049721:-1
position: 4049721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4016281-4016579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4011797-4012255:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4006236-4006585:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4003700-4003861:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4002638-4002769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3997597-3997704:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3995106-3995227:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3994736-3994859:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:3990693-3993150:-1:exon

RALBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: RALBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ralA-binding protein 1
translation: MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDIVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESTNLEEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVVLKQVTKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAKAEQQAQEDQEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI
SIO_010081: RALBP1
subclass of: SO_0000673
so part of: RALBP1
location: complement(join(3992884..3993150,3994736..3994859,3995106..3995227,3997597..3997704,4002638..4002769,4003700..4003861,4006236..4006585,4011797..4012255,4016281..4016524))
location: region:3992884-4016524:-1
so has part: feature:4016281-4016524:-1:exon
so has part: feature:4011797-4012255:-1:exon
so has part: feature:4006236-4006585:-1:exon
so has part: feature:4003700-4003861:-1:exon
so has part: feature:4002638-4002769:-1:exon
so has part: feature:3997597-3997704:-1:exon
so has part: feature:3995106-3995227:-1:exon
so has part: feature:3994736-3994859:-1:exon
so has part: feature:3992884-3993150:-1:exon

XP_025221183.1
type: Protein
SIO_000068: ncbiprotein

position:3992884:-1
position: 3992884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4016524:-1
position: 4016524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4016281-4016524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4011797-4012255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4006236-4006585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4003700-4003861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4002638-4002769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3997597-3997704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3995106-3995227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3994736-3994859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3992884-3993150:-1:exon

RALBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: RALBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ralA-binding protein 1
translation: MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDIVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESTNLEEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVVLKQVTKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAKAEQQAQEDQEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI
SIO_010081: RALBP1
subclass of: SO_0000673
so part of: RALBP1
location: complement(join(3992884..3993150,3994736..3994859,3995106..3995227,3997597..3997704,4002638..4002769,4003700..4003861,4006236..4006585,4011797..4012255,4016281..4016524))
location: region:3992884-4016524:-1
so has part: feature:4016281-4016524:-1:exon
so has part: feature:4011797-4012255:-1:exon
so has part: feature:4006236-4006585:-1:exon
so has part: feature:4003700-4003861:-1:exon
so has part: feature:4002638-4002769:-1:exon
so has part: feature:3997597-3997704:-1:exon
so has part: feature:3995106-3995227:-1:exon
so has part: feature:3994736-3994859:-1:exon
so has part: feature:3992884-3993150:-1:exon

XP_025221184.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4016281-4016524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4011797-4012255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4006236-4006585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4003700-4003861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4002638-4002769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3997597-3997704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3995106-3995227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3994736-3994859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3992884-3993150:-1:exon

RALBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: RALBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ralA-binding protein 1
translation: MTECFLPPTSSPSEHRRVEHGSGLTRTPSSEEISPTKFPGLYRTGEPSPPHDILHEPPDIVSDDEKDHGKKKGKFKKKEKRTEGYAAFQEDSSGDEAESPSKMKRSKGIHVFKKPSFSKKKEKDFKIKEKPKEEKHKEEKHKEEKHKEKKSKDLTAADVVKQWKEKKKKKKPIQEPEVPQIDVPNLKPIFGIPLADAVERTMMYDGIRLPAVFRECIDYVEKYGMKCEGIYRVSGIKSKVDELKAAYDREESTNLEEYEPNTVASLLKQYLRDLPENLLTKELMPRFEEACGRTTETEKVQEFQRLLKELPECNYLLISWLIVHMDHVIAKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGNVVLKQVTKPLRWSNMATMPTLPETQAGIKEEIRRQEFLLNCLHRDLQGGIKDLSKEERLWEVQRILTALKRKLREAKRQECETKIAQEIASLSKEDVSKEEMNENEEVINILLAQENEILTEQEELLAMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILEDLQRQNEELEIKNNHLNQAIHEEREAIIELRVQLRLLQMQRAKAEQQAQEDQEPEWRGGAVQPPRDGVLEPKAAKEQPKAGKEPAKPSPSRDRKETSI
SIO_010081: RALBP1
subclass of: SO_0000673
so part of: RALBP1
location: complement(join(3992884..3993150,3994736..3994859,3995106..3995227,3997597..3997704,4002638..4002769,4003700..4003861,4006236..4006585,4011797..4012255,4016281..4016524))
location: region:3992884-4016524:-1
so has part: feature:4016281-4016524:-1:exon
so has part: feature:4011797-4012255:-1:exon
so has part: feature:4006236-4006585:-1:exon
so has part: feature:4003700-4003861:-1:exon
so has part: feature:4002638-4002769:-1:exon
so has part: feature:3997597-3997704:-1:exon
so has part: feature:3995106-3995227:-1:exon
so has part: feature:3994736-3994859:-1:exon
so has part: feature:3992884-3993150:-1:exon

XP_025221185.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4016281-4016524:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4011797-4012255:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4006236-4006585:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4003700-4003861:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4002638-4002769:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3997597-3997704:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3995106-3995227:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3994736-3994859:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3992884-3993150:-1:exon

LOC112611779
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611779
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4010827..4010968
location: region:4010827-4010968:1
so has part: feature:4010827-4010968:1:exon

112611779
type: Gene
SIO_000068: ncbigene

position:4010827:1
position: 4010827
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4010968:1
position: 4010968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4010827-4010968:1:exon

LOC112611779
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611779
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC112611779
subclass of: SO_0000673
so part of: LOC112611779
location: 4010827..4010968
location: region:4010827-4010968:1
so has part: feature:4010827-4010968:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4010827-4010968:1:exon

TWSG1
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: TWSG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4119860..4185976)
location: region:4119860-4185976:-1
so has part: feature:4119860-4185976:-1:exon
subclass of: SO_0000010

112611531
type: Gene
SIO_000068: ncbigene

position:4119860:-1
position: 4119860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4185976:-1
position: 4185976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4119860-4185976:-1:exon

TWSG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: TWSG1
product: twisted gastrulation BMP signaling modulator 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 299 ESTs, 6 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365460.1
SIO_010081: TWSG1
subclass of: SO_0000673
so part of: TWSG1
location: complement(join(4119860..4122906,4125710..4125976,4160749..4160848,4183354..4183513,4185786..4185976))
location: region:4119860-4185976:-1
so has part: feature:4185786-4185976:-1:exon
so has part: feature:4183354-4183513:-1:exon
so has part: feature:4160749-4160848:-1:exon
so has part: feature:4125710-4125976:-1:exon
so has part: feature:4119860-4122906:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4185786-4185976:-1:exon

position:4185786:-1
position: 4185786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4183354-4183513:-1:exon

position:4183354:-1
position: 4183354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183513:-1
position: 4183513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4160749-4160848:-1:exon

position:4160749:-1
position: 4160749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4160848:-1
position: 4160848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4125710-4125976:-1:exon

position:4125710:-1
position: 4125710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4125976:-1
position: 4125976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4119860-4122906:-1:exon

position:4122906:-1
position: 4122906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TWSG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: TWSG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twisted gastrulation protein homolog 1
translation: MKLHYVAVLTLAILMFLTWLPASLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCDCVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALTEGDTQLNWNIVSFPVAEELSHHENLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQCKISCESMGASKYRWFHNACCECIGPECIDYGSKTVKCMNCMF
SIO_010081: TWSG1
subclass of: SO_0000673
so part of: TWSG1
location: complement(join(4122725..4122906,4125710..4125976,4160749..4160848,4183354..4183476))
location: region:4122725-4183476:-1
so has part: feature:4183354-4183476:-1:exon
so has part: feature:4160749-4160848:-1:exon
so has part: feature:4125710-4125976:-1:exon
so has part: feature:4122725-4122906:-1:exon

XP_025221245.1
type: Protein
SIO_000068: ncbiprotein

position:4122725:-1
position: 4122725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4183476:-1
position: 4183476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4183354-4183476:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4160749-4160848:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4125710-4125976:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4122725-4122906:-1:exon

ANKRD12
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: ANKRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4222738..4357056)
location: region:4222738-4357056:-1
so has part: feature:4222738-4357056:-1:exon
subclass of: SO_0000010

112611263
type: Gene
SIO_000068: ncbigene

position:4222738:-1
position: 4222738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4357056:-1
position: 4357056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4222738-4357056:-1:exon

ANKRD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: ANKRD12
product: ankyrin repeat domain 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 mRNAs, 332 ESTs, 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364896.1
SIO_010081: ANKRD12
subclass of: SO_0000673
so part of: ANKRD12
location: complement(join(4222738..4225579,4226867..4226962,4230523..4230666,4235283..4235381,4240058..4244769,4278475..4278622,4283607..4283749,4288683..4288883,4291663..4291809,4295914..4295982,4304941..4305088,4317746..4317882,4356851..4357056))
location: region:4222738-4357056:-1
so has part: feature:4356851-4357056:-1:exon
so has part: feature:4317746-4317882:-1:exon
so has part: feature:4304941-4305088:-1:exon
so has part: feature:4295914-4295982:-1:exon
so has part: feature:4291663-4291809:-1:exon
so has part: feature:4288683-4288883:-1:exon
so has part: feature:4283607-4283749:-1:exon
so has part: feature:4278475-4278622:-1:exon
so has part: feature:4240058-4244769:-1:exon
so has part: feature:4235283-4235381:-1:exon
so has part: feature:4230523-4230666:-1:exon
so has part: feature:4226867-4226962:-1:exon
so has part: feature:4222738-4225579:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4356851-4357056:-1:exon

position:4356851:-1
position: 4356851
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4317746-4317882:-1:exon

position:4317746:-1
position: 4317746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4317882:-1
position: 4317882
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4304941-4305088:-1:exon

position:4304941:-1
position: 4304941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4305088:-1
position: 4305088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4295914-4295982:-1:exon

position:4295914:-1
position: 4295914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4295982:-1
position: 4295982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4291663-4291809:-1:exon

position:4291663:-1
position: 4291663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4291809:-1
position: 4291809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4288683-4288883:-1:exon

position:4288683:-1
position: 4288683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4288883:-1
position: 4288883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4283607-4283749:-1:exon

position:4283607:-1
position: 4283607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4283749:-1
position: 4283749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4278475-4278622:-1:exon

position:4278475:-1
position: 4278475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4278622:-1
position: 4278622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4240058-4244769:-1:exon

position:4240058:-1
position: 4240058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4244769:-1
position: 4244769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4235283-4235381:-1:exon

position:4235283:-1
position: 4235283
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4235381:-1
position: 4235381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4230523-4230666:-1:exon

position:4230523:-1
position: 4230523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4230666:-1
position: 4230666
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4226867-4226962:-1:exon

position:4226867:-1
position: 4226867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4226962:-1
position: 4226962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4222738-4225579:-1:exon

position:4225579:-1
position: 4225579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ANKRD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: ANKRD12
product: ankyrin repeat domain 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 319 ESTs, 10 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364897.1
SIO_010081: ANKRD12
subclass of: SO_0000673
so part of: ANKRD12
location: complement(join(4222738..4225579,4226867..4226962,4230523..4230666,4235283..4235381,4240058..4244769,4278475..4278622,4283607..4283749,4288683..4288883,4291663..4291809,4295914..4295982,4304941..4305088,4317746..4317882,4356720..4357020))
location: region:4222738-4357020:-1
so has part: feature:4356720-4357020:-1:exon
so has part: feature:4317746-4317882:-1:exon
so has part: feature:4304941-4305088:-1:exon
so has part: feature:4295914-4295982:-1:exon
so has part: feature:4291663-4291809:-1:exon
so has part: feature:4288683-4288883:-1:exon
so has part: feature:4283607-4283749:-1:exon
so has part: feature:4278475-4278622:-1:exon
so has part: feature:4240058-4244769:-1:exon
so has part: feature:4235283-4235381:-1:exon
so has part: feature:4230523-4230666:-1:exon
so has part: feature:4226867-4226962:-1:exon
so has part: feature:4222738-4225579:-1:exon

position:4357020:-1
position: 4357020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4356720-4357020:-1:exon

position:4356720:-1
position: 4356720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4317746-4317882:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4304941-4305088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4295914-4295982:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4291663-4291809:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4288683-4288883:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4283607-4283749:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4278475-4278622:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4240058-4244769:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4235283-4235381:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4230523-4230666:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4226867-4226962:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4222738-4225579:-1:exon

ANKRD12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: ANKRD12
product: ankyrin repeat domain 12, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 mRNAs, 234 ESTs, 7 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364898.1
SIO_010081: ANKRD12
subclass of: SO_0000673
so part of: ANKRD12
location: complement(join(4224327..4225579,4226867..4226962,4230523..4230666,4235283..4235381,4240058..4244769,4278475..4278622,4283607..4283749,4288683..4288883,4291663..4291809,4304941..4305088,4317746..4317882,4355939..4356243))
location: region:4224327-4356243:-1
so has part: feature:4355939-4356243:-1:exon
so has part: feature:4317746-4317882:-1:exon
so has part: feature:4304941-4305088:-1:exon
so has part: feature:4291663-4291809:-1:exon
so has part: feature:4288683-4288883:-1:exon
so has part: feature:4283607-4283749:-1:exon
so has part: feature:4278475-4278622:-1:exon
so has part: feature:4240058-4244769:-1:exon
so has part: feature:4235283-4235381:-1:exon
so has part: feature:4230523-4230666:-1:exon
so has part: feature:4226867-4226962:-1:exon
so has part: feature:4224327-4225579:-1:exon

position:4224327:-1
position: 4224327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4356243:-1
position: 4356243
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4355939-4356243:-1:exon

position:4355939:-1
position: 4355939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4317746-4317882:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4304941-4305088:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4291663-4291809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4288683-4288883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4283607-4283749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4278475-4278622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4240058-4244769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4235283-4235381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4230523-4230666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4226867-4226962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4224327-4225579:-1:exon

ANKRD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: ANKRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 12 isoform X2
translation: MPKSGFTKPVQSENSDSDSNMVEKPYGRKSKDKIASYSKTPKIERSDVSKEMKEKSSMKRKLPFTISPSRNEERDSDTEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKREVPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKDSLICESKQILPSKAPLPSALDEYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDIQTKKEYVVSGEHKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRYDNTESEFLPESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKNKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKEDKSTKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTLGMSAIEESMGLHLVEKEIEIEKQEKHIKESKEKPEKRSQTKEKDIEKMERKNFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHTEKCHKESEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLTESKEKHLMEKKNKQSDNSEYTKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKEKDKKDIDRYKERDKHKDKIQLNSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSELTDAYTKEKQPKDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENEKPGLSSRSVSLISVASSEDSCHTTVTTPRPPVEYDSDFMLESSESQMSFSQSPFLSIAKSPALHERELDSLADLPERIKPPYANRLSTSHLRSSSVEDVKLIISEGRPTVEVRRCSMPSVICEHTKQFQTISEESNQGSLLTVPRDTSPSPKPEVFSNVPERDLSNVSNIHSGFAISPTGASNSKYVSADRNVIKNTAPVGTVMDSPVHLEPSSQVGVIQNKSWEMPVDRLETLSTRDFICPNSNIPDQESSLQSFCNSENKILKENADFLSLPQTELPGNSCAQDPASFMPSQQPCSFPSQSLSDAESISKHMSLSYVANQEPGILQQKNAVQISSSVLDTDNESTKDTENTFVLGDVQKTDAFVPVYSDSTIQEASPNFEKAYTLPVLPSEKDFNGNDASTQLNTHYAFSKLTYKSSSGHEVENSTTDIQVISHEKENKLESLVLTHLNRCDSDLCEMNAGMPKGNLNEQDPKHCPESEKCLLSIEDEESQQSILSSLENHSQQSAQPEMHKYGQLVKVELEENAEDDKTENQIPQRMTRNKANTMANQSKQILASCTLSSEKDSESSSPRGRIRLTEDDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIQPYSSERANPYFEYLHIRKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRMKLRLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRFNARQFMSWLQDVDDKFDKLKTCLLMRQQHEAAALNAVQRLEWQLK…
SIO_010081: ANKRD12
subclass of: SO_0000673
so part of: ANKRD12
location: complement(join(4225394..4225579,4226867..4226962,4230523..4230666,4235283..4235381,4240058..4244769,4278475..4278622,4283607..4283749,4288683..4288883,4291663..4291809,4304941..4305088,4317746..4317832))
location: region:4225394-4317832:-1
so has part: feature:4317746-4317832:-1:exon
so has part: feature:4304941-4305088:-1:exon
so has part: feature:4291663-4291809:-1:exon
so has part: feature:4288683-4288883:-1:exon
so has part: feature:4283607-4283749:-1:exon
so has part: feature:4278475-4278622:-1:exon
so has part: feature:4240058-4244769:-1:exon
so has part: feature:4235283-4235381:-1:exon
so has part: feature:4230523-4230666:-1:exon
so has part: feature:4226867-4226962:-1:exon
so has part: feature:4225394-4225579:-1:exon

XP_025220683.1
type: Protein
SIO_000068: ncbiprotein

position:4225394:-1
position: 4225394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4317832:-1
position: 4317832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4317746-4317832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4304941-4305088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4291663-4291809:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4288683-4288883:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4283607-4283749:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4278475-4278622:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4240058-4244769:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4235283-4235381:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4230523-4230666:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4226867-4226962:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4225394-4225579:-1:exon

ANKRD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: ANKRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 12 isoform X1
translation: MPKSGFTKPVQSENSDSDSNMVEKPYGRKSKDKIASYSKTPKIERSDVSKEMKEKSSMKRKLPFTISPSRNEERDSDTDSDPGHTSENWGERLISSYRTYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKREVPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKDSLICESKQILPSKAPLPSALDEYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDIQTKKEYVVSGEHKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRYDNTESEFLPESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKNKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKEDKSTKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTLGMSAIEESMGLHLVEKEIEIEKQEKHIKESKEKPEKRSQTKEKDIEKMERKNFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHTEKCHKESEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLTESKEKHLMEKKNKQSDNSEYTKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKEKDKKDIDRYKERDKHKDKIQLNSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSELTDAYTKEKQPKDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENEKPGLSSRSVSLISVASSEDSCHTTVTTPRPPVEYDSDFMLESSESQMSFSQSPFLSIAKSPALHERELDSLADLPERIKPPYANRLSTSHLRSSSVEDVKLIISEGRPTVEVRRCSMPSVICEHTKQFQTISEESNQGSLLTVPRDTSPSPKPEVFSNVPERDLSNVSNIHSGFAISPTGASNSKYVSADRNVIKNTAPVGTVMDSPVHLEPSSQVGVIQNKSWEMPVDRLETLSTRDFICPNSNIPDQESSLQSFCNSENKILKENADFLSLPQTELPGNSCAQDPASFMPSQQPCSFPSQSLSDAESISKHMSLSYVANQEPGILQQKNAVQISSSVLDTDNESTKDTENTFVLGDVQKTDAFVPVYSDSTIQEASPNFEKAYTLPVLPSEKDFNGNDASTQLNTHYAFSKLTYKSSSGHEVENSTTDIQVISHEKENKLESLVLTHLNRCDSDLCEMNAGMPKGNLNEQDPKHCPESEKCLLSIEDEESQQSILSSLENHSQQSAQPEMHKYGQLVKVELEENAEDDKTENQIPQRMTRNKANTMANQSKQILASCTLSSEKDSESSSPRGRIRLTEDDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIQPYSSERANPYFEYLHIRKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRMKLRLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRFNARQFMSWLQDVDDKFDKLKTC…
SIO_010081: ANKRD12
subclass of: SO_0000673
so part of: ANKRD12
location: complement(join(4225394..4225579,4226867..4226962,4230523..4230666,4235283..4235381,4240058..4244769,4278475..4278622,4283607..4283749,4288683..4288883,4291663..4291809,4295914..4295982,4304941..4305088,4317746..4317832))
location: region:4225394-4317832:-1
so has part: feature:4317746-4317832:-1:exon
so has part: feature:4304941-4305088:-1:exon
so has part: feature:4295914-4295982:-1:exon
so has part: feature:4291663-4291809:-1:exon
so has part: feature:4288683-4288883:-1:exon
so has part: feature:4283607-4283749:-1:exon
so has part: feature:4278475-4278622:-1:exon
so has part: feature:4240058-4244769:-1:exon
so has part: feature:4235283-4235381:-1:exon
so has part: feature:4230523-4230666:-1:exon
so has part: feature:4226867-4226962:-1:exon
so has part: feature:4225394-4225579:-1:exon

XP_025220681.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4317746-4317832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4304941-4305088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4295914-4295982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4291663-4291809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4288683-4288883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4283607-4283749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4278475-4278622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4240058-4244769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4235283-4235381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4230523-4230666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4226867-4226962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4225394-4225579:-1:exon

ANKRD12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: ANKRD12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ankyrin repeat domain-containing protein 12 isoform X1
translation: MPKSGFTKPVQSENSDSDSNMVEKPYGRKSKDKIASYSKTPKIERSDVSKEMKEKSSMKRKLPFTISPSRNEERDSDTDSDPGHTSENWGERLISSYRTYSEKEGPEKKKTKKEAGNKKSTPVSILFGYPLSERKQMALLMQMTARDNSPDSTPNHPSQTTPAQKKTPSSSSRQKDKVNKRNERGETPLHMAAIRGDVKQVKELISLGANVNVKDFAGWTPLHEACNVGYYDVAKILIAAGADVNTQGLDDDTPLHDSASSGHRDIVKLLLRHGGNPFQANKHGERPVDVAETEELELLLKREVPLSDDDESYTDSEEAQSVNPSSVDENIDSETEKDSLICESKQILPSKAPLPSALDEYEFKDDDDEEINKMIDDRHILRKEQRKENEPEAEKTHLFAKQEKAFYPKSFKSKKQKPSRVLYSSTESSDEEALQNKKISTSCSVIPETSNSDIQTKKEYVVSGEHKQKGKVKRKLKNQNKNKENQELKQEKEGKENTRITNLTVNTGLDCSEKTREEGNFRKSFSPKDDTSLHLFHISTGKSPKHSCGLSEKQSTPLKQEHTKTCLSPGSSEMSLQPDLVRYDNTESEFLPESSSVKSCKHKEKSKHQKDFHLEFGEKSNAKIKDEDHSPTFENSDCTLKKMDKEGKTLKKHKLKHKEREKEKHKKEIEGEKEKYKNKDSAKELQRSVEFDREFWKENFFKSDETEDLFLNMEHESLTLEKKSKLEKNIKEDKSTKEKHVSKERNFKEERDKIKKESEKSFREEKIKDLKEERENIPTDKDSEFTLGMSAIEESMGLHLVEKEIEIEKQEKHIKESKEKPEKRSQTKEKDIEKMERKNFEKEKKIKHEHKSEKDKLDLSECVDKIKEKDKLYSHHTEKCHKESEKSKNTAAIKKTDDREKSREKMDRKHDKEKPEKERHLTESKEKHLMEKKNKQSDNSEYTKSEKGKNKEKDRELDKKEKSRDKESINITNSKHIQEEKKSSIVDGNKAQHEKPLSLKEKTKDEPLKTPDGKEKDKKDIDRYKERDKHKDKIQLNSLLKLKSEADKPKPKSSPASKDTRPKEKRLVNDDLMQTSFERMLSLKDLEIEQWHKKHKEKIKQKEKERLRNRNCLELKIKDKEKTKHTPTESKNKELTRSKSSELTDAYTKEKQPKDAVSNRSQSVDTKNVMTLGKSSFVSDNSLNRSPRSENEKPGLSSRSVSLISVASSEDSCHTTVTTPRPPVEYDSDFMLESSESQMSFSQSPFLSIAKSPALHERELDSLADLPERIKPPYANRLSTSHLRSSSVEDVKLIISEGRPTVEVRRCSMPSVICEHTKQFQTISEESNQGSLLTVPRDTSPSPKPEVFSNVPERDLSNVSNIHSGFAISPTGASNSKYVSADRNVIKNTAPVGTVMDSPVHLEPSSQVGVIQNKSWEMPVDRLETLSTRDFICPNSNIPDQESSLQSFCNSENKILKENADFLSLPQTELPGNSCAQDPASFMPSQQPCSFPSQSLSDAESISKHMSLSYVANQEPGILQQKNAVQISSSVLDTDNESTKDTENTFVLGDVQKTDAFVPVYSDSTIQEASPNFEKAYTLPVLPSEKDFNGNDASTQLNTHYAFSKLTYKSSSGHEVENSTTDIQVISHEKENKLESLVLTHLNRCDSDLCEMNAGMPKGNLNEQDPKHCPESEKCLLSIEDEESQQSILSSLENHSQQSAQPEMHKYGQLVKVELEENAEDDKTENQIPQRMTRNKANTMANQSKQILASCTLSSEKDSESSSPRGRIRLTEDDDPQIHHPRKRKVSRVPQPVQVSPSLLQAKEKTQQSLAAIVDSLKLDEIQPYSSERANPYFEYLHIRKKIEEKRKLLCSVIPQAPQYYDEYVTFNGSYLLDGNPLSKICIPTITPPPSLSDPLKELFRQQEVVRMKLRLQHSIEREKLIVSNEQEVLRVHYRAARTLANQTLPFSACTVLLDAEVYNVPLDSQSDDSKTSVRDRFNARQFMSWLQDVDDKFDKLKTC…
SIO_010081: ANKRD12
subclass of: SO_0000673
so part of: ANKRD12
location: complement(join(4225394..4225579,4226867..4226962,4230523..4230666,4235283..4235381,4240058..4244769,4278475..4278622,4283607..4283749,4288683..4288883,4291663..4291809,4295914..4295982,4304941..4305088,4317746..4317832))
location: region:4225394-4317832:-1
so has part: feature:4317746-4317832:-1:exon
so has part: feature:4304941-4305088:-1:exon
so has part: feature:4295914-4295982:-1:exon
so has part: feature:4291663-4291809:-1:exon
so has part: feature:4288683-4288883:-1:exon
so has part: feature:4283607-4283749:-1:exon
so has part: feature:4278475-4278622:-1:exon
so has part: feature:4240058-4244769:-1:exon
so has part: feature:4235283-4235381:-1:exon
so has part: feature:4230523-4230666:-1:exon
so has part: feature:4226867-4226962:-1:exon
so has part: feature:4225394-4225579:-1:exon

XP_025220682.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4317746-4317832:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4304941-4305088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4295914-4295982:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4291663-4291809:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4288683-4288883:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4283607-4283749:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4278475-4278622:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4240058-4244769:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4235283-4235381:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4230523-4230666:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4226867-4226962:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4225394-4225579:-1:exon

LOC112611764
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611764
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4228413..4228513)
location: region:4228413-4228513:-1
so has part: feature:4228413-4228513:-1:exon
subclass of: SO_0000578

112611764
type: Gene
SIO_000068: ncbigene

position:4228413:-1
position: 4228413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4228513:-1
position: 4228513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4228413-4228513:-1:exon

LOC112611764
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9565
nc RNA class: snoRNA
gene: LOC112611764
product: small nucleolar RNA U13
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_003116741.1
SIO_010081: LOC112611764
subclass of: SO_0000673
so part of: LOC112611764
location: complement(4228413..4228513)
location: region:4228413-4228513:-1
so has part: feature:4228413-4228513:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4228413-4228513:-1:exon

NDUFV2
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: NDUFV2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4359819..4394239)
location: region:4359819-4394239:-1
so has part: feature:4359819-4394239:-1:exon
subclass of: SO_0000010

112611264
type: Gene
SIO_000068: ncbigene

position:4359819:-1
position: 4359819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4394239:-1
position: 4394239
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4359819-4394239:-1:exon

NDUFV2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: NDUFV2
product: NADH:ubiquinone oxidoreductase core subunit V2, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 mRNAs, 285 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025364900.1
SIO_010081: NDUFV2
subclass of: SO_0000673
so part of: NDUFV2
location: complement(join(4359819..4359969,4367585..4367661,4369495..4369604,4371855..4372023,4375149..4375265,4375351..4375413,4376808..4376873,4394070..4394239))
location: region:4359819-4394239:-1
so has part: feature:4394070-4394239:-1:exon
so has part: feature:4376808-4376873:-1:exon
so has part: feature:4375351-4375413:-1:exon
so has part: feature:4375149-4375265:-1:exon
so has part: feature:4371855-4372023:-1:exon
so has part: feature:4369495-4369604:-1:exon
so has part: feature:4367585-4367661:-1:exon
so has part: feature:4359819-4359969:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4394070-4394239:-1:exon

position:4394070:-1
position: 4394070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4376808-4376873:-1:exon

position:4376808:-1
position: 4376808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4376873:-1
position: 4376873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4375351-4375413:-1:exon

position:4375351:-1
position: 4375351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4375413:-1
position: 4375413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4375149-4375265:-1:exon

position:4375149:-1
position: 4375149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4375265:-1
position: 4375265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4371855-4372023:-1:exon

position:4371855:-1
position: 4371855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4372023:-1
position: 4372023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4369495-4369604:-1:exon

position:4369495:-1
position: 4369495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4369604:-1
position: 4369604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4367585-4367661:-1:exon

position:4367585:-1
position: 4367585
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4367661:-1
position: 4367661
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4359819-4359969:-1:exon

position:4359969:-1
position: 4359969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFV2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: NDUFV2
product: NADH:ubiquinone oxidoreductase core subunit V2, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 183 ESTs, 16 Proteins, and 57% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364899.1
SIO_010081: NDUFV2
subclass of: SO_0000673
so part of: NDUFV2
location: complement(join(4359819..4359969,4367585..4367661,4369495..4369604,4371855..4372023,4375149..4375265,4375351..4375413,4376808..4376873,4381281..4381288,4381993..4382504))
location: region:4359819-4382504:-1
so has part: feature:4381993-4382504:-1:exon
so has part: feature:4381281-4381288:-1:exon
so has part: feature:4376808-4376873:-1:exon
so has part: feature:4375351-4375413:-1:exon
so has part: feature:4375149-4375265:-1:exon
so has part: feature:4371855-4372023:-1:exon
so has part: feature:4369495-4369604:-1:exon
so has part: feature:4367585-4367661:-1:exon
so has part: feature:4359819-4359969:-1:exon

position:4382504:-1
position: 4382504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4381993-4382504:-1:exon

position:4381993:-1
position: 4381993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4381281-4381288:-1:exon

position:4381281:-1
position: 4381281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4381288:-1
position: 4381288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4376808-4376873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4375351-4375413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4375149-4375265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4371855-4372023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4369495-4369604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4367585-4367661:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4359819-4359969:-1:exon

NDUFV2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: NDUFV2
product: NADH:ubiquinone oxidoreductase core subunit V2, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 103 ESTs, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025364901.1
SIO_010081: NDUFV2
subclass of: SO_0000673
so part of: NDUFV2
location: complement(join(4359823..4359966,4365089..4365093,4367585..4367661,4369495..4369604,4371855..4372023,4375149..4375265,4375351..4375413,4376808..4376873,4394070..4394239))
location: region:4359823-4394239:-1
so has part: feature:4394070-4394239:-1:exon
so has part: feature:4376808-4376873:-1:exon
so has part: feature:4375351-4375413:-1:exon
so has part: feature:4375149-4375265:-1:exon
so has part: feature:4371855-4372023:-1:exon
so has part: feature:4369495-4369604:-1:exon
so has part: feature:4367585-4367661:-1:exon
so has part: feature:4365089-4365093:-1:exon
so has part: feature:4359823-4359966:-1:exon

position:4359823:-1
position: 4359823
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4394070-4394239:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376808-4376873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4375351-4375413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4375149-4375265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4371855-4372023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4369495-4369604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4367585-4367661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4365089-4365093:-1:exon

position:4365089:-1
position: 4365089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4365093:-1
position: 4365093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4359823-4359966:-1:exon

position:4359966:-1
position: 4359966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NDUFV2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: NDUFV2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial isoform X2
translation: MFFSAALRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGVQAGL
SIO_010081: NDUFV2
subclass of: SO_0000673
so part of: NDUFV2
location: complement(join(4359876..4359969,4367585..4367661,4369495..4369604,4371855..4372023,4375149..4375265,4375351..4375413,4376808..4376873,4394070..4394123))
location: region:4359876-4394123:-1
so has part: feature:4394070-4394123:-1:exon
so has part: feature:4376808-4376873:-1:exon
so has part: feature:4375351-4375413:-1:exon
so has part: feature:4375149-4375265:-1:exon
so has part: feature:4371855-4372023:-1:exon
so has part: feature:4369495-4369604:-1:exon
so has part: feature:4367585-4367661:-1:exon
so has part: feature:4359876-4359969:-1:exon

XP_025220685.1
type: Protein
SIO_000068: ncbiprotein

position:4359876:-1
position: 4359876
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4394123:-1
position: 4394123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4394070-4394123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376808-4376873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4375351-4375413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4375149-4375265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4371855-4372023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4369495-4369604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4367585-4367661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4359876-4359969:-1:exon

NDUFV2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: NDUFV2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial isoform X1
translation: MQFHHVDRAGLELLTSSDTLALASQSAGITASWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFGVQAGL
SIO_010081: NDUFV2
subclass of: SO_0000673
so part of: NDUFV2
location: complement(join(4359876..4359969,4367585..4367661,4369495..4369604,4371855..4372023,4375149..4375265,4375351..4375413,4376808..4376873,4381281..4381288,4381993..4382083))
location: region:4359876-4382083:-1
so has part: feature:4381993-4382083:-1:exon
so has part: feature:4381281-4381288:-1:exon
so has part: feature:4376808-4376873:-1:exon
so has part: feature:4375351-4375413:-1:exon
so has part: feature:4375149-4375265:-1:exon
so has part: feature:4371855-4372023:-1:exon
so has part: feature:4369495-4369604:-1:exon
so has part: feature:4367585-4367661:-1:exon
so has part: feature:4359876-4359969:-1:exon

XP_025220684.1
type: Protein
SIO_000068: ncbiprotein

position:4382083:-1
position: 4382083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4381993-4382083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4381281-4381288:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4376808-4376873:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4375351-4375413:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4375149-4375265:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4371855-4372023:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4369495-4369604:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4367585-4367661:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4359876-4359969:-1:exon

NDUFV2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: NDUFV2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial isoform X3
translation: MFFSAALRARAAGLTAHWGRHVRNLHKTAMQNGAGGALFVHRDTPENNPDTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPVLDLAQRQNGWLPISAMNKVAEVLQVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKIPKPGPRHLDASLVSQLEVLPL
SIO_010081: NDUFV2
subclass of: SO_0000673
so part of: NDUFV2
location: complement(join(4359923..4359966,4365089..4365093,4367585..4367661,4369495..4369604,4371855..4372023,4375149..4375265,4375351..4375413,4376808..4376873,4394070..4394123))
location: region:4359923-4394123:-1
so has part: feature:4394070-4394123:-1:exon
so has part: feature:4376808-4376873:-1:exon
so has part: feature:4375351-4375413:-1:exon
so has part: feature:4375149-4375265:-1:exon
so has part: feature:4371855-4372023:-1:exon
so has part: feature:4369495-4369604:-1:exon
so has part: feature:4367585-4367661:-1:exon
so has part: feature:4365089-4365093:-1:exon
so has part: feature:4359923-4359966:-1:exon

XP_025220686.1
type: Protein
SIO_000068: ncbiprotein

position:4359923:-1
position: 4359923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4394070-4394123:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4376808-4376873:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4375351-4375413:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4375149-4375265:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4371855-4372023:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4369495-4369604:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4367585-4367661:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4365089-4365093:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4359923-4359966:-1:exon

LOC112611265
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611265
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 4388389..4389987
location: region:4388389-4389987:1
so has part: feature:4388389-4389987:1:exon

112611265
type: Gene
SIO_000068: ncbigene

position:4388389:1
position: 4388389
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4389987:1
position: 4389987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4388389-4389987:1:exon

LOC112611265
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9565
gene: LOC112611265
product: adenylate kinase 2, mitochondrial pseudogene
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 262 ESTs, 3 Proteins, and 54% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
transcript id: XR_003116621.1
SIO_010081: LOC112611265
so part of: LOC112611265
location: 4388389..4389987
location: region:4388389-4389987:1
so has part: feature:4388389-4389987:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4388389-4389987:1:exon

LOC112611712
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611712
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4472669..4476164)
location: region:4472669-4476164:-1
so has part: feature:4472669-4476164:-1:exon

112611712
type: Gene
SIO_000068: ncbigene

position:4472669:-1
position: 4472669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4476164:-1
position: 4476164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4472669-4476164:-1:exon

LOC112611712
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611712
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC112611712
subclass of: SO_0000673
so part of: LOC112611712
location: complement(4472669..4473414)
location: region:4472669-4473414:-1
so has part: feature:4472669-4473414:-1:exon

position:4473414:-1
position: 4473414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4472669-4473414:-1:exon

LOC112611712
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611712
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins
pseudo: true
SIO_010081: LOC112611712
subclass of: SO_0000673
so part of: LOC112611712
location: complement(4475974..4476164)
location: region:4475974-4476164:-1
so has part: feature:4475974-4476164:-1:exon

position:4475974:-1
position: 4475974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4475974-4476164:-1:exon

MTCL1
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: MTCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4629223..4753622)
location: region:4629223-4753622:-1
so has part: feature:4629223-4753622:-1:exon
subclass of: SO_0000010

112611485
type: Gene
SIO_000068: ncbigene

position:4629223:-1
position: 4629223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4753622:-1
position: 4753622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4629223-4753622:-1:exon

MTCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MTCL1
product: microtubule crosslinking factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 97 ESTs, 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365365.1
SIO_010081: MTCL1
subclass of: SO_0000673
so part of: MTCL1
location: complement(join(4629223..4633070,4635711..4637244,4640518..4640549,4642816..4643112,4648174..4648428,4654322..4654489,4663048..4663245,4664907..4665137,4675119..4675274,4676379..4677692,4683260..4683319,4739662..4739820,4741819..4742043,4752357..4753622))
location: region:4629223-4753622:-1
so has part: feature:4752357-4753622:-1:exon
so has part: feature:4741819-4742043:-1:exon
so has part: feature:4739662-4739820:-1:exon
so has part: feature:4683260-4683319:-1:exon
so has part: feature:4676379-4677692:-1:exon
so has part: feature:4675119-4675274:-1:exon
so has part: feature:4664907-4665137:-1:exon
so has part: feature:4663048-4663245:-1:exon
so has part: feature:4654322-4654489:-1:exon
so has part: feature:4648174-4648428:-1:exon
so has part: feature:4642816-4643112:-1:exon
so has part: feature:4640518-4640549:-1:exon
so has part: feature:4635711-4637244:-1:exon
so has part: feature:4629223-4633070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4752357-4753622:-1:exon

position:4752357:-1
position: 4752357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4741819-4742043:-1:exon

position:4741819:-1
position: 4741819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4742043:-1
position: 4742043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4739662-4739820:-1:exon

position:4739662:-1
position: 4739662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4739820:-1
position: 4739820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4683260-4683319:-1:exon

position:4683260:-1
position: 4683260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4683319:-1
position: 4683319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4676379-4677692:-1:exon

position:4676379:-1
position: 4676379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4677692:-1
position: 4677692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4675119-4675274:-1:exon

position:4675119:-1
position: 4675119
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4675274:-1
position: 4675274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4664907-4665137:-1:exon

position:4664907:-1
position: 4664907
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4665137:-1
position: 4665137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4663048-4663245:-1:exon

position:4663048:-1
position: 4663048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4663245:-1
position: 4663245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4654322-4654489:-1:exon

position:4654322:-1
position: 4654322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4654489:-1
position: 4654489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4648174-4648428:-1:exon

position:4648174:-1
position: 4648174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4648428:-1
position: 4648428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4642816-4643112:-1:exon

position:4642816:-1
position: 4642816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4643112:-1
position: 4643112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4640518-4640549:-1:exon

position:4640518:-1
position: 4640518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4640549:-1
position: 4640549
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4635711-4637244:-1:exon

position:4635711:-1
position: 4635711
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4637244:-1
position: 4637244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4629223-4633070:-1:exon

position:4633070:-1
position: 4633070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MTCL1
product: microtubule crosslinking factor 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 80 ESTs, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365367.1
SIO_010081: MTCL1
subclass of: SO_0000673
so part of: MTCL1
location: complement(join(4629223..4630393,4633014..4633070,4635711..4637244,4640518..4640549,4642816..4643112,4648174..4648428,4654322..4654489,4663048..4663245,4664907..4665137,4675119..4675274,4676379..4677692,4683260..4683319,4739662..4739820,4741819..4742043,4751509..4751663))
location: region:4629223-4751663:-1
so has part: feature:4751509-4751663:-1:exon
so has part: feature:4741819-4742043:-1:exon
so has part: feature:4739662-4739820:-1:exon
so has part: feature:4683260-4683319:-1:exon
so has part: feature:4676379-4677692:-1:exon
so has part: feature:4675119-4675274:-1:exon
so has part: feature:4664907-4665137:-1:exon
so has part: feature:4663048-4663245:-1:exon
so has part: feature:4654322-4654489:-1:exon
so has part: feature:4648174-4648428:-1:exon
so has part: feature:4642816-4643112:-1:exon
so has part: feature:4640518-4640549:-1:exon
so has part: feature:4635711-4637244:-1:exon
so has part: feature:4633014-4633070:-1:exon
so has part: feature:4629223-4630393:-1:exon

position:4751663:-1
position: 4751663
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4751509-4751663:-1:exon

position:4751509:-1
position: 4751509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4741819-4742043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4739662-4739820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4683260-4683319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4676379-4677692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4675119-4675274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4664907-4665137:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4663048-4663245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4654322-4654489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4648174-4648428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4642816-4643112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4640518-4640549:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4635711-4637244:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4633014-4633070:-1:exon

position:4633014:-1
position: 4633014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4629223-4630393:-1:exon

position:4630393:-1
position: 4630393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

MTCL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: MTCL1
product: microtubule crosslinking factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 80 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365366.1
SIO_010081: MTCL1
subclass of: SO_0000673
so part of: MTCL1
location: complement(join(4629223..4630393,4633014..4633070,4635711..4637244,4640518..4640549,4642816..4643112,4648174..4648428,4654322..4654489,4663048..4663245,4664907..4665137,4668278..4668400,4675119..4675274,4676379..4677692,4683260..4683319,4739662..4739820,4741819..4742043,4742503..4742561,4743047..4743102))
location: region:4629223-4743102:-1
so has part: feature:4743047-4743102:-1:exon
so has part: feature:4742503-4742561:-1:exon
so has part: feature:4741819-4742043:-1:exon
so has part: feature:4739662-4739820:-1:exon
so has part: feature:4683260-4683319:-1:exon
so has part: feature:4676379-4677692:-1:exon
so has part: feature:4675119-4675274:-1:exon
so has part: feature:4668278-4668400:-1:exon
so has part: feature:4664907-4665137:-1:exon
so has part: feature:4663048-4663245:-1:exon
so has part: feature:4654322-4654489:-1:exon
so has part: feature:4648174-4648428:-1:exon
so has part: feature:4642816-4643112:-1:exon
so has part: feature:4640518-4640549:-1:exon
so has part: feature:4635711-4637244:-1:exon
so has part: feature:4633014-4633070:-1:exon
so has part: feature:4629223-4630393:-1:exon

position:4743102:-1
position: 4743102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4743047-4743102:-1:exon

position:4743047:-1
position: 4743047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4742503-4742561:-1:exon

position:4742503:-1
position: 4742503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4742561:-1
position: 4742561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4741819-4742043:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4739662-4739820:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4683260-4683319:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4676379-4677692:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4675119-4675274:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4668278-4668400:-1:exon

position:4668278:-1
position: 4668278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4668400:-1
position: 4668400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4664907-4665137:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4663048-4663245:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4654322-4654489:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4648174-4648428:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4642816-4643112:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4640518-4640549:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4635711-4637244:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4633014-4633070:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4629223-4630393:-1:exon

MTCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MTCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule cross-linking factor 1 isoform X1
translation: METLNGPAGGGAPDAKLQPPGQHHRHHHLHPVAERRRLHRAPSPARPFLKDLHARPAAPGPAVPSSGRAPASAAPRSPNLAGKAPPSPGSLAAPGRLSRRGGGVPGAKDKPPPGAGARAAGGAKAALGSRRAARVAPAEPLSRAGKPPGAEPPPAAAKGRKAKRGSRAPPARTIVPPTPAARIPAVTLAVTSVAGSPVRCSRISHTDSSSDLSDCPSEPLSDEQRLLPAASSDAESGTGSSDREPPRGAPTPSPAARGAPPGSPEPPALLAAPLCPGGRSIPGGVSGGFAGPGAAEDARGRAPPERPVPGTPKEPSLGEQPRLVPAAEEEELLREMEELRSENDYLKDELDELRAEMEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTCNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGLGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFEPPREPGWLGEGASPGAGGGAPLQEELKSARLQISELSGKVLKLQHENHALLSNIQRCDLAAHLGLRAPSPRDSDAESDAGKKESEGEESRLPQPKREGPVGGESDSEEMFEKTSGFGSGKPSEASEPCATELLKAREDSECLVTLKHEAQRLERTVEHLIADTDSFLRDAGLQGGAPSPGPGLQGEEERGEGDQQEPHLLGTINAKMKSFKKELQAFLEQVNRIGDGLSPLPHLTESSSFLSTVTSVSRDSPIGNLGKELGPDLQSRLREQLEWQLGPARGDERESLRLRTARELHRRADGDAGSHGLGGQTCFSLEMEEEHLYALRWKELEMHSLALQNSLHERTWSDEKNLMQQELRSLKQNIFLFYVKLRWLLKHWRQGKQMEEEGEEFTEGEHPETLSGLGELGVQGSHQADGPDHDDSDRGCGFPVGEHSPHSRVQIGDHSLRLQTTDRGQSHKQVVENQQLFSAFKTLLEDFRAELREDERARLRLQQQYASDKAAWDVEWAVLKCRLEQLEEKTENKLGELGSSAESKGALKKEREVHQKLLADSHSLVMDLRWQIHHSEKNWNREKVELLDRLDRDRQEWERQKKELLWRIEQLQKENSPRRGGSFLCDQKDGNVRPFPHQGSHRVPRPVAMWPCADADSIPFEDQPLSKLKESDRCSASENLYLDALSLDDEPEEPPAHRPEREFRNRLPEEEENHKGNLQRAVSVSSMSEFQRLMDISPFLPEKGLPSTSSKEDITPPLSPDDLKYIEEFNKSWDYTPTRGHNGGGPDLWADRTEVGRAGHEDSTEPFPDSSWYLTTSVTMTTDTMTSPEHCQKQPLRSHVLTEQSGVRVLHSPPAVRRVDSITVAGGESPFPTSRARGSLGDTKGGPPEPMLSRWPCTSPRHSRDYVEGARRPLDSPLCTSLGFASPLHSLEMSKNLSDDMKEVAFSVRNAICSGPGEPQVKDMACQTNGSRTMGTQTVQTISVGLQTEALRGSGVTSSPHKCLTPKAGGGATPVSSPSRSLRSRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPKADQPNNRTSPGMAQKGYSESAWARSTTTRESPVHTTINDGLSSLFNIIDHSPVVQDPFQKGLRAGSRSRSAEPPPELAPGQETGTNSRGRSPSPIGVGSEMCREEGGEGTPVRQDLSAPPGYTLTENVARILNKKLLEHALKEERRQAAHGSPGLHGDSHSLGDTAEPGPMENQTVLLTAPWGL
SIO_010081: MTCL1
subclass of: SO_0000673
so part of: MTCL1
location: complement(join(4633032..4633070,4635711..4637244,4640518..4640549,4642816..4643112,4648174..4648428,4654322..4654489,4663048..4663245,4664907..4665137,4675119..4675274,4676379..4677692,4683260..4683319,4739662..4739820,4741819..4742043,4752357..4753397))
location: region:4633032-4753397:-1
so has part: feature:4752357-4753397:-1:exon
so has part: feature:4741819-4742043:-1:exon
so has part: feature:4739662-4739820:-1:exon
so has part: feature:4683260-4683319:-1:exon
so has part: feature:4676379-4677692:-1:exon
so has part: feature:4675119-4675274:-1:exon
so has part: feature:4664907-4665137:-1:exon
so has part: feature:4663048-4663245:-1:exon
so has part: feature:4654322-4654489:-1:exon
so has part: feature:4648174-4648428:-1:exon
so has part: feature:4642816-4643112:-1:exon
so has part: feature:4640518-4640549:-1:exon
so has part: feature:4635711-4637244:-1:exon
so has part: feature:4633032-4633070:-1:exon

XP_025221150.1
type: Protein
SIO_000068: ncbiprotein

position:4633032:-1
position: 4633032
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4753397:-1
position: 4753397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4752357-4753397:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4741819-4742043:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4739662-4739820:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4683260-4683319:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4676379-4677692:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4675119-4675274:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4664907-4665137:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4663048-4663245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4654322-4654489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4648174-4648428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4642816-4643112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4640518-4640549:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4635711-4637244:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4633032-4633070:-1:exon

MTCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MTCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule cross-linking factor 1 isoform X3
translation: MEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTCNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGLGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFEPPREPGWLGEGASPGAGGGAPLQEELKSARLQISELSGKVLKLQHENHALLSNIQRCDLAAHLGLRAPSPRDSDAESDAGKKESEGEESRLPQPKREGPVGGESDSEEMFEKTSGFGSGKPSEASEPCATELLKAREDSECLVTLKHEAQRLERTVEHLIADTDSFLRDAGLQGGAPSPGPGLQGEEERGEGDQQEPHLLGTINAKMKSFKKELQAFLEQVNRIGDGLSPLPHLTESSSFLSTVTSVSRDSPIGNLGKELGPDLQSRLREQLEWQLGPARGDERESLRLRTARELHRRADGDAGSHGLGGQTCFSLEMEEEHLYALRWKELEMHSLALQNSLHERTWSDEKNLMQQELRSLKQNIFLFYVKLRWLLKHWRQGKQMEEEGEEFTEGEHPETLSGLGELGVQGSHQADGPDHDDSDRGCGFPVGEHSPHSRVQIGDHSLRLQTTDRGQSHKQVVENQQLFSAFKTLLEDFRAELREDERARLRLQQQYASDKAAWDVEWAVLKCRLEQLEEKTENKLGELGSSAESKGALKKEREVHQKLLADSHSLVMDLRWQIHHSEKNWNREKVELLDRLDRDRQEWERQKKELLWRIEQLQKENSPRRGGSFLCDQKDGNVRPFPHQGSHRVPRPVAMWPCADADSIPFEDQPLSKLKESDRCSASENLYLDALSLDDEPEEPPAHRPEREFRNRLPEEEENHKGNLQRAVSVSSMSEFQRLMDISPFLPEKGLPSTSSKEDITPPLSPDDLKYIEEFNKSWDYTPTRGHNGGGPDLWADRTEVGRAGHEDSTEPFPDSSWYLTTSVTMTTDTMTSPEHCQKQPLRSHVLTEQSGVRVLHSPPAVRRVDSITVAGGESPFPTSRARGSLGDTKGGPPEPMLSRWPCTSPRHSRDYVEGARRPLDSPLCTSLGFASPLHSLEMSKNLSDDMKEVAFSVRNAICSGPGEPQVKDMACQTNGSRTMGTQTVQTISVGLQTEALRGSGVTSSPHKCLTPKAGGGATPVSSPSRSLRSRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPKADQPNNRTSPGMAQKGYSESAWARSTTTRESPVHTTINDGLSSLFNIIDHSPVVQDPFQKGLRAGSRSRSAEPPPELAPGQETGTNSRGRSPSPIGVGSEMCREEGGEGTPVRQDLSAPPGYTLTENVARILNKKLLEHALKEERRQAAHGSPGLHGDSHSLGDTAEPGPMENQTVLLTAPWGL
SIO_010081: MTCL1
subclass of: SO_0000673
so part of: MTCL1
location: complement(join(4633032..4633070,4635711..4637244,4640518..4640549,4642816..4643112,4648174..4648428,4654322..4654489,4663048..4663245,4664907..4665137,4675119..4675274,4676379..4677692,4683260..4683319,4739662..4739820,4741819..4742016))
location: region:4633032-4742016:-1
so has part: feature:4741819-4742016:-1:exon
so has part: feature:4739662-4739820:-1:exon
so has part: feature:4683260-4683319:-1:exon
so has part: feature:4676379-4677692:-1:exon
so has part: feature:4675119-4675274:-1:exon
so has part: feature:4664907-4665137:-1:exon
so has part: feature:4663048-4663245:-1:exon
so has part: feature:4654322-4654489:-1:exon
so has part: feature:4648174-4648428:-1:exon
so has part: feature:4642816-4643112:-1:exon
so has part: feature:4640518-4640549:-1:exon
so has part: feature:4635711-4637244:-1:exon
so has part: feature:4633032-4633070:-1:exon

XP_025221152.1
type: Protein
SIO_000068: ncbiprotein

position:4742016:-1
position: 4742016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4741819-4742016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4739662-4739820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683260-4683319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4676379-4677692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4675119-4675274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4664907-4665137:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4663048-4663245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4654322-4654489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4648174-4648428:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4642816-4643112:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4640518-4640549:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4635711-4637244:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4633032-4633070:-1:exon

MTCL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: MTCL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: microtubule cross-linking factor 1 isoform X2
translation: MEEMRDSYLEEDVYQLQELRRELDRANKNCRILQYRLRKAEQKSLKVAETGQVDGELIRSLEQDLKVAKDVSVRLHHELKTVEEKRAKAEDENETLRQQMIEVEISKQALQNELERLKESSLKRRSTREMYKEKKTCNQDDSADLRCQLQFAKEEAFLMRKKMAKLGREKDELEQELQKYKSLYGDVDSPLPTGEAGGPPSTREAELKLRLKLVEEEANILGRKIVELEVENRGLKAEMEDMRGQQEREGLGRDHAPSIPTSPFGDSLESSTELRRHLQFVEEEAELLRRSISEIEDHNRQLTHELSKFKFEPPREPGWLGEGASPGAGGGAPLQEELKSARLQISELSGKVLKLQHENHALLSNIQRCDLAAHLGLRAPSPRDSDAESDAGKKESEGEESRLPQPKREGPVGGESDSEEMFEKTSGFGSGKPSEASEPCATELLKAREDSECLVTLKHEAQRLERTVEHLIADTDSFLRDAGLQGGAPSPGPGLQGEEERGEGDQQEPHLLGTINAKMKSFKKELQAFLEQVNRIGDGLSPLPHLTESSSFLSTVTSVSRDSPIGNLGKELGPDLQSRLREQLEWQLGPARGDERESLRLRTARELHRRADGDAGSHGLGGQTCFSLELRGPSVLPEQSVSIEELQGQLVQAARLHQEETETFTNKIHKMEEEHLYALRWKELEMHSLALQNSLHERTWSDEKNLMQQELRSLKQNIFLFYVKLRWLLKHWRQGKQMEEEGEEFTEGEHPETLSGLGELGVQGSHQADGPDHDDSDRGCGFPVGEHSPHSRVQIGDHSLRLQTTDRGQSHKQVVENQQLFSAFKTLLEDFRAELREDERARLRLQQQYASDKAAWDVEWAVLKCRLEQLEEKTENKLGELGSSAESKGALKKEREVHQKLLADSHSLVMDLRWQIHHSEKNWNREKVELLDRLDRDRQEWERQKKELLWRIEQLQKENSPRRGGSFLCDQKDGNVRPFPHQGSHRVPRPVAMWPCADADSIPFEDQPLSKLKESDRCSASENLYLDALSLDDEPEEPPAHRPEREFRNRLPEEEENHKGNLQRAVSVSSMSEFQRLMDISPFLPEKGLPSTSSKEDITPPLSPDDLKYIEEFNKSWDYTPTRGHNGGGPDLWADRTEVGRAGHEDSTEPFPDSSWYLTTSVTMTTDTMTSPEHCQKQPLRSHVLTEQSGVRVLHSPPAVRRVDSITVAGGESPFPTSRARGSLGDTKGGPPEPMLSRWPCTSPRHSRDYVEGARRPLDSPLCTSLGFASPLHSLEMSKNLSDDMKEVAFSVRNAICSGPGEPQVKDMACQTNGSRTMGTQTVQTISVGLQTEALRGSGVTSSPHKCLTPKAGGGATPVSSPSRSLRSRQVAPAIEKVQAKFERTCCSPKYGSPKLQRKPLPKADQPNNRTSPGMAQKGYSESAWARSTTTRESPVHTTINDGLSSLFNIIDHSPVVQDPFQKGLRAGSRSRSAEPPPELAPGQETGTNSRGRSPSPIGVGSEMCREEGGEGTPVRQDLSAPPGYTLTENVARILNKKLLEHALKEERRQAAHGSPGLHGDSHSLGDTAEPGPMENQTVLLTAPWGL
SIO_010081: MTCL1
subclass of: SO_0000673
so part of: MTCL1
location: complement(join(4633032..4633070,4635711..4637244,4640518..4640549,4642816..4643112,4648174..4648428,4654322..4654489,4663048..4663245,4664907..4665137,4668278..4668400,4675119..4675274,4676379..4677692,4683260..4683319,4739662..4739820,4741819..4742016))
location: region:4633032-4742016:-1
so has part: feature:4741819-4742016:-1:exon
so has part: feature:4739662-4739820:-1:exon
so has part: feature:4683260-4683319:-1:exon
so has part: feature:4676379-4677692:-1:exon
so has part: feature:4675119-4675274:-1:exon
so has part: feature:4668278-4668400:-1:exon
so has part: feature:4664907-4665137:-1:exon
so has part: feature:4663048-4663245:-1:exon
so has part: feature:4654322-4654489:-1:exon
so has part: feature:4648174-4648428:-1:exon
so has part: feature:4642816-4643112:-1:exon
so has part: feature:4640518-4640549:-1:exon
so has part: feature:4635711-4637244:-1:exon
so has part: feature:4633032-4633070:-1:exon

XP_025221151.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4741819-4742016:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4739662-4739820:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4683260-4683319:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4676379-4677692:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4675119-4675274:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4668278-4668400:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4664907-4665137:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4663048-4663245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4654322-4654489:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4648174-4648428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4642816-4643112:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4640518-4640549:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4635711-4637244:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4633032-4633070:-1:exon

RAB12
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: RAB12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4826415..4854063)
location: region:4826415-4854063:-1
so has part: feature:4826415-4854063:-1:exon
subclass of: SO_0000010

112611730
type: Gene
SIO_000068: ncbigene

position:4826415:-1
position: 4826415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4854063:-1
position: 4854063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4826415-4854063:-1:exon

RAB12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: RAB12
product: RAB12, member RAS oncogene family
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 44 ESTs, 8 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365704.1
SIO_010081: RAB12
subclass of: SO_0000673
so part of: RAB12
location: complement(join(4826415..4827624,4829265..4829369,4829995..4830084,4832268..4832406,4839615..4839675,4853792..4854063))
location: region:4826415-4854063:-1
so has part: feature:4853792-4854063:-1:exon
so has part: feature:4839615-4839675:-1:exon
so has part: feature:4832268-4832406:-1:exon
so has part: feature:4829995-4830084:-1:exon
so has part: feature:4829265-4829369:-1:exon
so has part: feature:4826415-4827624:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4853792-4854063:-1:exon

position:4853792:-1
position: 4853792
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4839615-4839675:-1:exon

position:4839615:-1
position: 4839615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4839675:-1
position: 4839675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4832268-4832406:-1:exon

position:4832268:-1
position: 4832268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4832406:-1
position: 4832406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4829995-4830084:-1:exon

position:4829995:-1
position: 4829995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4830084:-1
position: 4830084
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4829265-4829369:-1:exon

position:4829265:-1
position: 4829265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4829369:-1
position: 4829369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4826415-4827624:-1:exon

position:4827624:-1
position: 4827624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

RAB12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: RAB12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ras-related protein Rab-12
translation: MDPGAALQRRVGGGGGGGLGAGSPALSGGQGRRRKQPPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSNSILSLQPEPEIPPELPPPRPHVRCC
SIO_010081: RAB12
subclass of: SO_0000673
so part of: RAB12
location: complement(join(4827511..4827624,4829265..4829369,4829995..4830084,4832268..4832406,4839615..4839675,4853792..4854023))
location: region:4827511-4854023:-1
so has part: feature:4853792-4854023:-1:exon
so has part: feature:4839615-4839675:-1:exon
so has part: feature:4832268-4832406:-1:exon
so has part: feature:4829995-4830084:-1:exon
so has part: feature:4829265-4829369:-1:exon
so has part: feature:4827511-4827624:-1:exon

XP_025221489.1
type: Protein
SIO_000068: ncbiprotein

position:4827511:-1
position: 4827511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4854023:-1
position: 4854023
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4853792-4854023:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4839615-4839675:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4832268-4832406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4829995-4830084:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4829265-4829369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4827511-4827624:-1:exon

LOC112611713
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611713
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4906416..4907674)
location: region:4906416-4907674:-1
so has part: feature:4906416-4907674:-1:exon

112611713
type: Gene
SIO_000068: ncbigene

position:4906416:-1
position: 4906416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4907674:-1
position: 4907674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4906416-4907674:-1:exon

LOC112611713
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC112611713
subclass of: SO_0000673
so part of: LOC112611713
location: complement(4906416..4906857)
location: region:4906416-4906857:-1
so has part: feature:4906416-4906857:-1:exon

position:4906857:-1
position: 4906857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4906416-4906857:-1:exon

LOC112611713
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC112611713
subclass of: SO_0000673
so part of: LOC112611713
location: complement(4907081..4907089)
location: region:4907081-4907089:-1
so has part: feature:4907081-4907089:-1:exon

position:4907081:-1
position: 4907081
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4907089:-1
position: 4907089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4907081-4907089:-1:exon

LOC112611713
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611713
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC112611713
subclass of: SO_0000673
so part of: LOC112611713
location: complement(4907177..4907674)
location: region:4907177-4907674:-1
so has part: feature:4907177-4907674:-1:exon

position:4907177:-1
position: 4907177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4907177-4907674:-1:exon

LOC112611546
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: LOC112611546
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5024609..5026246)
location: region:5024609-5026246:-1
so has part: feature:5024609-5026246:-1:exon

112611546
type: Gene
SIO_000068: ncbigene

position:5024609:-1
position: 5024609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5026246:-1
position: 5026246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5024609-5026246:-1:exon

LOC112611546
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins
pseudo: true
SIO_010081: LOC112611546
subclass of: SO_0000673
so part of: LOC112611546
location: complement(5024609..5026009)
location: region:5024609-5026009:-1
so has part: feature:5024609-5026009:-1:exon

position:5026009:-1
position: 5026009
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5024609-5026009:-1:exon

LOC112611546
type: Exon
subclass of: SO_0000147
RO_0002162: 9565
gene: LOC112611546
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 2 Proteins
pseudo: true
SIO_010081: LOC112611546
subclass of: SO_0000673
so part of: LOC112611546
location: complement(5026210..5026246)
location: region:5026210-5026246:-1
so has part: feature:5026210-5026246:-1:exon

position:5026210:-1
position: 5026210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5026210-5026246:-1:exon

PTPRM
type: Gene
subclass of: SO_0000704
RO_0002162: 9565
gene: PTPRM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5031262..5871998)
location: region:5031262-5871998:-1
so has part: feature:5031262-5871998:-1:exon
subclass of: SO_0000010

112611347
type: Gene
SIO_000068: ncbigene

position:5031262:-1
position: 5031262
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5871998:-1
position: 5871998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5031262-5871998:-1:exon

PTPRM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPRM
product: protein tyrosine phosphatase, receptor type M, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 250 ESTs, 5 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365055.1
SIO_010081: PTPRM
subclass of: SO_0000673
so part of: PTPRM
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location: region:5031262-5871998:-1
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urn:…
SIO_000300: 1
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urn:…
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SIO_000300: 4
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SIO_000300: 13
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SIO_000300: 14
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SIO_000300: 15
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SIO_000300: 16
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SIO_000300: 17
SIO_000628: feature:5191664-5191690:-1:exon

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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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SIO_000300: 20
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SIO_000300: 21
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SIO_000300: 22
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SIO_000300: 29
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SIO_000300: 30
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SIO_000300: 31
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SIO_000300: 32
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SIO_000300: 33
SIO_000628: feature:5031262-5032012:-1:exon

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PTPRM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPRM
product: protein tyrosine phosphatase, receptor type M, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 251 ESTs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_025365057.1
SIO_010081: PTPRM
subclass of: SO_0000673
so part of: PTPRM
location: complement(join(5031262..5032012,5043410..5043545,5050397..5050560,5052948..5053073,5057168..5057299,5058268..5058441,5059324..5059473,5061137..5061272,5061531..5061685,5066357..5066473,5094243..5094340,5119697..5119733,5124060..5124136,5142817..5142904,5186451..5186638,5191921..5191995,5195429..5195580,5295259..5295391,5324991..5325027,5326046..5326319,5349064..5349166,5352038..5352239,5361637..5361746,5368241..5368549,5474566..5474859,5480624..5480798,5504780..5504895,5525237..5525315,5543973..5544244,5658853..5658975,5870876..5871445))
location: region:5031262-5871445:-1
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urn:…
SIO_000300: 1
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SIO_000628: feature:5043410-5043545:-1:exon

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SIO_000300: 31
SIO_000628: feature:5031262-5032012:-1:exon

PTPRM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPRM
product: protein tyrosine phosphatase, receptor type M, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 232 ESTs, 2 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365054.1
SIO_010081: PTPRM
subclass of: SO_0000673
so part of: PTPRM
location: complement(join(5031264..5032012,5043410..5043545,5050397..5050560,5052948..5053073,5057168..5057299,5058268..5058441,5059324..5059473,5061137..5061272,5061531..5061685,5065552..5065602,5066357..5066473,5094243..5094340,5119697..5119733,5124060..5124136,5142817..5142904,5186451..5186638,5187365..5187376,5191664..5191690,5191921..5191995,5195429..5195580,5295259..5295391,5317146..5317220,5324991..5325027,5326046..5326319,5349064..5349166,5352038..5352239,5361637..5361746,5368241..5368549,5474566..5474859,5480624..5480798,5504780..5504895,5525237..5525315,5543973..5544244,5658853..5658975,5870876..5871501))
location: region:5031264-5871501:-1
so has part: feature:5870876-5871501:-1:exon
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position:5031264:-1
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type: ReverseStrandPosition
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position:5871501:-1
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 5
SIO_000628: feature:5504780-5504895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5480624-5480798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5474566-5474859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5368241-5368549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5361637-5361746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5352038-5352239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5349064-5349166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5326046-5326319:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5324991-5325027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5317146-5317220:-1:exon

position:5317146:-1
position: 5317146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5317220:-1
position: 5317220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5295259-5295391:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5195429-5195580:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5191921-5191995:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5191664-5191690:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5187365-5187376:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5186451-5186638:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5142817-5142904:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5124060-5124136:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5119697-5119733:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5094243-5094340:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5066357-5066473:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5065552-5065602:-1:exon

position:5065552:-1
position: 5065552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5065602:-1
position: 5065602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:5061531-5061685:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5061137-5061272:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5059324-5059473:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5058268-5058441:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5057168-5057299:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5052948-5053073:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5050397-5050560:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:5043410-5043545:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:5031264-5032012:-1:exon

PTPRM
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9565
gene: PTPRM
product: protein tyrosine phosphatase, receptor type M, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 179 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_025365058.1
SIO_010081: PTPRM
subclass of: SO_0000673
so part of: PTPRM
location: complement(join(5031620..5032012,5043410..5043545,5050397..5050560,5052948..5053073,5057168..5057299,5058268..5058441,5059324..5059473,5061137..5061272,5061531..5061685,5066357..5066473,5094243..5094340,5119697..5119733,5124060..5124136,5142817..5142904,5186451..5186638,5191921..5191995,5195429..5195580,5295259..5295391,5324991..5325027,5326046..5326319,5349064..5349166,5352038..5352239,5361637..5361746,5368241..5368549,5474566..5474859,5480624..5480798,5482931..5483061))
location: region:5031620-5483061:-1
so has part: feature:5482931-5483061:-1:exon
so has part: feature:5480624-5480798:-1:exon
so has part: feature:5474566-5474859:-1:exon
so has part: feature:5368241-5368549:-1:exon
so has part: feature:5361637-5361746:-1:exon
so has part: feature:5352038-5352239:-1:exon
so has part: feature:5349064-5349166:-1:exon
so has part: feature:5326046-5326319:-1:exon
so has part: feature:5324991-5325027:-1:exon
so has part: feature:5295259-5295391:-1:exon
so has part: feature:5195429-5195580:-1:exon
so has part: feature:5191921-5191995:-1:exon
so has part: feature:5186451-5186638:-1:exon
so has part: feature:5142817-5142904:-1:exon
so has part: feature:5124060-5124136:-1:exon
so has part: feature:5119697-5119733:-1:exon
so has part: feature:5094243-5094340:-1:exon
so has part: feature:5066357-5066473:-1:exon
so has part: feature:5061531-5061685:-1:exon
so has part: feature:5061137-5061272:-1:exon
so has part: feature:5059324-5059473:-1:exon
so has part: feature:5058268-5058441:-1:exon
so has part: feature:5057168-5057299:-1:exon
so has part: feature:5052948-5053073:-1:exon
so has part: feature:5050397-5050560:-1:exon
so has part: feature:5043410-5043545:-1:exon
so has part: feature:5031620-5032012:-1:exon

position:5031620:-1
position: 5031620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5483061:-1
position: 5483061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5482931-5483061:-1:exon

position:5482931:-1
position: 5482931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5480624-5480798:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5474566-5474859:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5368241-5368549:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5361637-5361746:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5352038-5352239:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5349064-5349166:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5326046-5326319:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5324991-5325027:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5295259-5295391:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5195429-5195580:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5191921-5191995:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5186451-5186638:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5142817-5142904:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5124060-5124136:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5119697-5119733:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5094243-5094340:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5066357-5066473:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5061531-5061685:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5061137-5061272:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5059324-5059473:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5058268-5058441:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5057168-5057299:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5052948-5053073:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5050397-5050560:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5043410-5043545:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5031620-5032012:-1:exon

PTPRM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPRM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase mu isoform X3
translation: MRRLGTCLATLAGLLLTAAGETFSGGCLFDEPYSTCGYSQSEDDDFNWEQVNTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGSPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPHKSYRIYFQAASRANGETKIDCVRVATKGAATPKPVPEPEKQTDHTVKIAGVIAGILLFVIIFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQGTNCDEAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPDETQTMASDTSSLVQSHTYKKREPADVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPNAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACLCGDTSVPASQVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSVVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRIYNAARPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGEGRTVVHCLNGGGRSGTFCAISIVCEMLRHQRTVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLNSG
SIO_010081: PTPRM
subclass of: SO_0000673
so part of: PTPRM
location: complement(join(5031959..5032012,5043410..5043545,5050397..5050560,5052948..5053073,5057168..5057299,5058268..5058441,5059324..5059473,5061137..5061272,5061531..5061685,5066357..5066473,5094243..5094340,5119697..5119733,5124060..5124136,5142817..5142904,5186451..5186638,5191921..5191995,5195429..5195580,5295259..5295391,5324991..5325027,5326046..5326319,5349064..5349166,5352038..5352239,5361637..5361746,5368241..5368549,5474566..5474859,5480624..5480798,5504780..5504895,5525237..5525315,5543973..5544244,5658853..5658975,5870876..5870948))
location: region:5031959-5870948:-1
so has part: feature:5870876-5870948:-1:exon
so has part: feature:5658853-5658975:-1:exon
so has part: feature:5543973-5544244:-1:exon
so has part: feature:5525237-5525315:-1:exon
so has part: feature:5504780-5504895:-1:exon
so has part: feature:5480624-5480798:-1:exon
so has part: feature:5474566-5474859:-1:exon
so has part: feature:5368241-5368549:-1:exon
so has part: feature:5361637-5361746:-1:exon
so has part: feature:5352038-5352239:-1:exon
so has part: feature:5349064-5349166:-1:exon
so has part: feature:5326046-5326319:-1:exon
so has part: feature:5324991-5325027:-1:exon
so has part: feature:5295259-5295391:-1:exon
so has part: feature:5195429-5195580:-1:exon
so has part: feature:5191921-5191995:-1:exon
so has part: feature:5186451-5186638:-1:exon
so has part: feature:5142817-5142904:-1:exon
so has part: feature:5124060-5124136:-1:exon
so has part: feature:5119697-5119733:-1:exon
so has part: feature:5094243-5094340:-1:exon
so has part: feature:5066357-5066473:-1:exon
so has part: feature:5061531-5061685:-1:exon
so has part: feature:5061137-5061272:-1:exon
so has part: feature:5059324-5059473:-1:exon
so has part: feature:5058268-5058441:-1:exon
so has part: feature:5057168-5057299:-1:exon
so has part: feature:5052948-5053073:-1:exon
so has part: feature:5050397-5050560:-1:exon
so has part: feature:5043410-5043545:-1:exon
so has part: feature:5031959-5032012:-1:exon

XP_025220842.1
type: Protein
SIO_000068: ncbiprotein

position:5031959:-1
position: 5031959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5870948:-1
position: 5870948
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5870876-5870948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5658853-5658975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5543973-5544244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5525237-5525315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5504780-5504895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5480624-5480798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5474566-5474859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5368241-5368549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5361637-5361746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5352038-5352239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5349064-5349166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5326046-5326319:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5324991-5325027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5295259-5295391:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5195429-5195580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5191921-5191995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5186451-5186638:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5142817-5142904:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5124060-5124136:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5119697-5119733:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5094243-5094340:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5066357-5066473:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5061531-5061685:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5061137-5061272:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5059324-5059473:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5058268-5058441:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5057168-5057299:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5052948-5053073:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5050397-5050560:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5043410-5043545:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5031959-5032012:-1:exon

PTPRM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPRM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase mu isoform X2
translation: MRRLGTCLATLAGLLLTAAGETFSGGCLFDEPYSTCGYSQSEDDDFNWEQVNTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGSPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPHKSYRIYFQAASRANGETKIDCVRVATKGAATPKPVPEPEKQTDHTVKIAGVIAGILLFVIIFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQGTNCDEAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPDPFVPTAILVPINDETQTMASDTSSLVQSHTYKKREPADVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPNAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACLCGDTSVPASQVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSVVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRIYNAARPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGEGRTVVHCLNGGGRSGTFCAISIVCEMLRHQRTVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLNSG
SIO_010081: PTPRM
subclass of: SO_0000673
so part of: PTPRM
location: complement(join(5031959..5032012,5043410..5043545,5050397..5050560,5052948..5053073,5057168..5057299,5058268..5058441,5059324..5059473,5061137..5061272,5061531..5061685,5066357..5066473,5094243..5094340,5119697..5119733,5124060..5124136,5142817..5142904,5186451..5186638,5187365..5187376,5191664..5191690,5191921..5191995,5195429..5195580,5295259..5295391,5324991..5325027,5326046..5326319,5349064..5349166,5352038..5352239,5361637..5361746,5368241..5368549,5474566..5474859,5480624..5480798,5504780..5504895,5525237..5525315,5543973..5544244,5658853..5658975,5870876..5870948))
location: region:5031959-5870948:-1
so has part: feature:5870876-5870948:-1:exon
so has part: feature:5658853-5658975:-1:exon
so has part: feature:5543973-5544244:-1:exon
so has part: feature:5525237-5525315:-1:exon
so has part: feature:5504780-5504895:-1:exon
so has part: feature:5480624-5480798:-1:exon
so has part: feature:5474566-5474859:-1:exon
so has part: feature:5368241-5368549:-1:exon
so has part: feature:5361637-5361746:-1:exon
so has part: feature:5352038-5352239:-1:exon
so has part: feature:5349064-5349166:-1:exon
so has part: feature:5326046-5326319:-1:exon
so has part: feature:5324991-5325027:-1:exon
so has part: feature:5295259-5295391:-1:exon
so has part: feature:5195429-5195580:-1:exon
so has part: feature:5191921-5191995:-1:exon
so has part: feature:5191664-5191690:-1:exon
so has part: feature:5187365-5187376:-1:exon
so has part: feature:5186451-5186638:-1:exon
so has part: feature:5142817-5142904:-1:exon
so has part: feature:5124060-5124136:-1:exon
so has part: feature:5119697-5119733:-1:exon
so has part: feature:5094243-5094340:-1:exon
so has part: feature:5066357-5066473:-1:exon
so has part: feature:5061531-5061685:-1:exon
so has part: feature:5061137-5061272:-1:exon
so has part: feature:5059324-5059473:-1:exon
so has part: feature:5058268-5058441:-1:exon
so has part: feature:5057168-5057299:-1:exon
so has part: feature:5052948-5053073:-1:exon
so has part: feature:5050397-5050560:-1:exon
so has part: feature:5043410-5043545:-1:exon
so has part: feature:5031959-5032012:-1:exon

XP_025220840.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5870876-5870948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5658853-5658975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5543973-5544244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5525237-5525315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5504780-5504895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5480624-5480798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5474566-5474859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5368241-5368549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5361637-5361746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5352038-5352239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5349064-5349166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5326046-5326319:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5324991-5325027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5295259-5295391:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5195429-5195580:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5191921-5191995:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5191664-5191690:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5187365-5187376:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5186451-5186638:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:5142817-5142904:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:5124060-5124136:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:5119697-5119733:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:5094243-5094340:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:5066357-5066473:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:5061531-5061685:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:5061137-5061272:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:5059324-5059473:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:5058268-5058441:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:5057168-5057299:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:5052948-5053073:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:5050397-5050560:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:5043410-5043545:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:5031959-5032012:-1:exon

PTPRM
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9565
gene: PTPRM
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: receptor-type tyrosine-protein phosphatase mu isoform X1
translation: MRRLGTCLATLAGLLLTAAGETFSGGCLFDEPYSTCGYSQSEDDDFNWEQVNTLTKPTSDPWMPSGSFMLVNASGRPEGQRAHLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGSPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPATNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPHKSYRIYFQAASRANGETKIDCVRVATKAAIIVTQLTTPYIRIAPAAGDGQLTGAATPKPVPEPEKQTDHTVKIAGVIAGILLFVIIFLGVVLVMKKRKLAKKRKETMSSTRQEMTVMVNSMDKSYAEQGTNCDEAFSFMDTHNLNGRSVSSPSSFTMKTNTLSTSVPNSYYPDPFVPTAILVPINDETQTMASDTSSLVQSHTYKKREPADVPYQTGQLHPAIRVADLLQHITQMKCAEGYGFKEEYESFFEGQSAPWDSAKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNYIDGYHRPNHYIATQGPMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYKDIKVTLIETELLAEYVIRTFAVEKGGAGGEANCSPSREVSQRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPNAGPLVVHCSAGAGRTGCFIVIDIMLDMAEREGVVDIYNCVRELRSRRVNMVQTEEQYVFIHDAILEACLCGDTSVPASQVRSLYYDMNKLDPQTNSSQIKEEFRTLNMVTPTLRVEDCSIALLPRNHEKNRCMDILPPDRCLPFLITIDGESSNYINAALMDSYKQPSAFIVTQHPLPNTVKDFWRLVLDYHCTSVVMLNDVDPAQLCPQYWPENGVHRHGPIQVEFVSADLEEDIISRIFRIYNAARPQDGYRMVQQFQFLGWPMYRDTPVSKRSFLKLIRQVDKWQEEYNGGEGRTVVHCLNGGGRSGTFCAISIVCEMLRHQRTVDVFHAVKTLRNNKPNMVDLLDQYKFCYEVALEYLNSG
SIO_010081: PTPRM
subclass of: SO_0000673
so part of: PTPRM
location: complement(join(5031959..5032012,5043410..5043545,5050397..5050560,5052948..5053073,5057168..5057299,5058268..5058441,5059324..5059473,5061137..5061272,5061531..5061685,5065552..5065602,5066357..5066473,5094243..5094340,5119697..5119733,5124060..5124136,5142817..5142904,5186451..5186638,5187365..5187376,5191664..5191690,5191921..5191995,5195429..5195580,5295259..5295391,5317146..5317220,5324991..5325027,5326046..5326319,5349064..5349166,5352038..5352239,5361637..5361746,5368241..5368549,5474566..5474859,5480624..5480798,5504780..5504895,5525237..5525315,5543973..5544244,5658853..5658975,5870876..5870948))
location: region:5031959-5870948:-1
so has part: feature:5870876-5870948:-1:exon
so has part: feature:5658853-5658975:-1:exon
so has part: feature:5543973-5544244:-1:exon
so has part: feature:5525237-5525315:-1:exon
so has part: feature:5504780-5504895:-1:exon
so has part: feature:5480624-5480798:-1:exon
so has part: feature:5474566-5474859:-1:exon
so has part: feature:5368241-5368549:-1:exon
so has part: feature:5361637-5361746:-1:exon
so has part: feature:5352038-5352239:-1:exon
so has part: feature:5349064-5349166:-1:exon
so has part: feature:5326046-5326319:-1:exon
so has part: feature:5324991-5325027:-1:exon
so has part: feature:5317146-5317220:-1:exon
so has part: feature:5295259-5295391:-1:exon
so has part: feature:5195429-5195580:-1:exon
so has part: feature:5191921-5191995:-1:exon
so has part: feature:5191664-5191690:-1:exon
so has part: feature:5187365-5187376:-1:exon
so has part: feature:5186451-5186638:-1:exon
so has part: feature:5142817-5142904:-1:exon
so has part: feature:5124060-5124136:-1:exon
so has part: feature:5119697-5119733:-1:exon
so has part: feature:5094243-5094340:-1:exon
so has part: feature:5066357-5066473:-1:exon
so has part: feature:5065552-5065602:-1:exon
so has part: feature:5061531-5061685:-1:exon
so has part: feature:5061137-5061272:-1:exon
so has part: feature:5059324-5059473:-1:exon
so has part: feature:5058268-5058441:-1:exon
so has part: feature:5057168-5057299:-1:exon
so has part: feature:5052948-5053073:-1:exon
so has part: feature:5050397-5050560:-1:exon
so has part: feature:5043410-5043545:-1:exon
so has part: feature:5031959-5032012:-1:exon

XP_025220839.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5870876-5870948:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5658853-5658975:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5543973-5544244:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5525237-5525315:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5504780-5504895:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5480624-5480798:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5474566-5474859:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5368241-5368549:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5361637-5361746:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5352038-5352239:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5349064-5349166:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5326046-5326319:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5324991-5325027:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5317146-5317220:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5295259-5295391:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5195429-5195580:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5191921-5191995:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:5191664-5191690:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:5187365-5187376:-1:exon