Papio anubis isolate east mitochondrion, complete genome.
type: Entry
definition: Papio anubis isolate east mitochondrion, complete genome.
sequence version: NC_020006.2
sequence date: 2023-04-03
sequence: sequence
division: PRI
label: NC_020006.2
type: RefSeq
SIO_000068: refseq
dblink: PRJNA927338
keyword: RefSeq
source: mitochondrion Papio anubis (olive baboon)
organism: Papio anubis
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Papio.
reference: 1
references: 23180628
reference: 2
reference: 3
comment: REVIEWED REFSEQ: This record has been curated by NCBI staff. The\nreference sequence is identical to JX946196.\n\nOn Mar 7, 2013 this sequence version replaced NC_020006.1.\nCOMPLETENESS: full length.

sequence
subclass of: SO_0000819
sequence length: 16516
topology: circular
so has quality: SO_0000988
location: 1..16516
location: region:1-16516:1
RO_0002162: 9555

NC_020006
type: RefSeq
SIO_000068: refseq

PRJNA927338
type: BioProject
SIO_000068: bioproject

1
title: Baboon phylogeny as inferred from complete mitochondrial genomes
author: Zinner, D.
author: Wertheimer, J.
author: Liedigk, R.
author: Groeneveld, L.F.
author: Roos, C.
journal: Am. J. Phys. Anthropol. (2012) In press
pubmed: 23180628
comments: Publication Status: Available-Online prior to print

23180628
type: PubMed
SIO_000068: pubmed

2
title: Direct Submission
journal: Submitted (31-DEC-2012) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA

3
title: Direct Submission
author: Zinner, D.
author: Wertheimer, J.
author: Liedigk, R.
author: Groeneveld, L.F.
author: Roos, C.
journal: Submitted (09-OCT-2012) Cognitive Ethology Laboratory, Primate Genetics Laboratory, German Primate Center, Kellnerweg 4, Goettingen 37077, Germany

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16516:1
position: 16516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-16516:1:source
so part of: sequence
organism: Papio anubis
organelle: mitochondrion
mol type: genomic DNA
isolate: east
country: Ethiopia: Managasha NP

9555
type: Taxonomy
SIO_000068: taxonomy

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Phe
so part of: sequence
location: 1..72
location: region:1-72:1
so has part: feature:1-72:1:region

position:72:1
position: 72
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1-72:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9555
product: s-rRNA
note: 12S ribosomal RNA
so part of: sequence
location: 73..1019
location: region:73-1019:1
so has part: feature:73-1019:1:region

position:73:1
position: 73
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1019:1
position: 1019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:73-1019:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Val
so part of: sequence
location: 1020..1088
location: region:1020-1088:1
so has part: feature:1020-1088:1:region

position:1020:1
position: 1020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1088:1
position: 1088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1020-1088:1:region

rRNA
type: Ribosomal RNA
subclass of: SO_0000252
RO_0002162: 9555
product: l-rRNA
note: 16S ribosomal RNA
so part of: sequence
location: 1089..2650
location: region:1089-2650:1
so has part: feature:1089-2650:1:region

position:1089:1
position: 1089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2650:1
position: 2650
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1089-2650:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Leu
so part of: sequence
location: 2651..2725
location: region:2651-2725:1
so has part: feature:2651-2725:1:region

position:2651:1
position: 2651
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2725:1
position: 2725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2651-2725:1:region

ND1
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ND1
so part of: sequence
location: 2728..3682
location: region:2728-3682:1
so has part: feature:2728-3682:1:exon
subclass of: SO_0000010

14444642
type: Gene
SIO_000068: ncbigene

position:2728:1
position: 2728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3682:1
position: 3682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2728-3682:1:exon

ND1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ND1
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:3682,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 1
translation: MTTMNLLLLIMSTLAAMAFLTLVERKLLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLKPSTSSTILYITAPALAFSIALLLWTPLPMPNPLINFNLGLLFILATSSLTVYSILWSGWASNSNYALIGALRAVAQMISYEVTLSIILLSILLTSGSFNLNMLITTQEHLWLILPSWPLAMMWFTSTLAETNRTPFDLMEGESELVSGFNIEYSAGPFALFFMAEYMNIIMMNALTTTIFLGTFYPTHSPELFTTSFTIKTLLLTSLFLWIRAAYPRFRYDQLMHLLWKSFLPLTLALLMWSTSMPIAISSIPPQT
SIO_010081: ND1
subclass of: SO_0000673
so part of: ND1
location: 2728..3682
location: region:2728-3682:1
so has part: feature:2728-3682:1:exon

YP_007316883.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2728-3682:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Ile
so part of: sequence
location: 3683..3751
location: region:3683-3751:1
so has part: feature:3683-3751:1:region

position:3683:1
position: 3683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3751:1
position: 3751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3683-3751:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Gln
so part of: sequence
location: complement(3749..3820)
location: region:3749-3820:-1
so has part: feature:3749-3820:-1:region

position:3749:-1
position: 3749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3820:-1
position: 3820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3749-3820:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Met
so part of: sequence
location: 3822..3889
location: region:3822-3889:1
so has part: feature:3822-3889:1:region

position:3822:1
position: 3822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889:1
position: 3889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3822-3889:1:region

ND2
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ND2
so part of: sequence
location: 3890..4937
location: region:3890-4937:1
so has part: feature:3890-4937:1:exon
subclass of: SO_0000010

14444630
type: Gene
SIO_000068: ncbigene

position:3890:1
position: 3890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4937:1
position: 4937
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3890-4937:1:exon

ND2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ND2
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:4937,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 2
translation: MNPLAQLIIYTTVITGTLITMLSSHWFLAWAGLEMNMLAFIPTLIKKTNARSTEAATKYFLAQSTASMILMMAIISNNLLSGHWTTTTTNYTNQFPPLAMTIALTMKLGMAPFHFWVPEVTQGTPLTSGLLLLTWQKLAPISIMYQIHPSINTHILLILSTLSIAVGSWGGLNQTQLRKILGYSSITHTGWMMMTLTYNPTITTLYLITYITLTTTMFLTLNLNSSTTTLTLSNTWNKSTHLMPLMTSTLLSLGGLPPLTGFLPKWVTIQELTMNNNFIIPTIMITMTLLNLYFYMRLIYTISLTLLPTSNNTKMTWQFENTKPTLFIPALITISTLLLPISPLILSIP
SIO_010081: ND2
subclass of: SO_0000673
so part of: ND2
location: 3890..4937
location: region:3890-4937:1
so has part: feature:3890-4937:1:exon

YP_007316884.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3890-4937:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Trp
so part of: sequence
location: 4938..5003
location: region:4938-5003:1
so has part: feature:4938-5003:1:region

position:4938:1
position: 4938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5003:1
position: 5003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4938-5003:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Ala
so part of: sequence
location: complement(5012..5080)
location: region:5012-5080:-1
so has part: feature:5012-5080:-1:region

position:5012:-1
position: 5012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5080:-1
position: 5080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5012-5080:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Asn
so part of: sequence
location: complement(5082..5154)
location: region:5082-5154:-1
so has part: feature:5082-5154:-1:region

position:5082:-1
position: 5082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5154:-1
position: 5154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5082-5154:-1:region

rep_origin
type: Replication Origin
subclass of: SO_0000296
RO_0002162: 9555
direction: LEFT
so part of: sequence
location: 5155..5188
location: region:5155-5188:1
so has part: feature:5155-5188:1:region

position:5155:1
position: 5155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5188:1
position: 5188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5155-5188:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Cys
so part of: sequence
location: complement(5186..5247)
location: region:5186-5247:-1
so has part: feature:5186-5247:-1:region

position:5186:-1
position: 5186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5247:-1
position: 5247
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5186-5247:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Tyr
so part of: sequence
location: complement(5253..5318)
location: region:5253-5318:-1
so has part: feature:5253-5318:-1:region

position:5253:-1
position: 5253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5318:-1
position: 5318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5253-5318:-1:region

COX1
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: COX1
so part of: sequence
location: 5332..6900
location: region:5332-6900:1
so has part: feature:5332-6900:1:exon
subclass of: SO_0000010

14444631
type: Gene
SIO_000068: ncbigene

position:5332:1
position: 5332
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6900:1
position: 6900
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5332-6900:1:exon

COX1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: COX1
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit I
translation: MLINRWLFSTNHKDIGTLYLLFGAWAGVTGMALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRLNNMSFWLLPPSFLLLMASTAVEAGAGTGWTVYPPLSGNFSHPGASVDLVIFSLHLAGISSILGAINFITTIINMKPPAMSQYQTPLFVWSILITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPVGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTHYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMLWALGFIFLFTMGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTCAKAHFIITFMGVNLTFFPQHFLGLSGMPRRYSDYPDAYTTWNILSSMGSFISLTATILMIYMIWEAFASKRKVLLTEHPSTSLEWLNGCPPPHHTFEEPAYIKLSEKGGSRTP
SIO_010081: COX1
subclass of: SO_0000673
so part of: COX1
location: 5332..6900
location: region:5332-6900:1
so has part: feature:5332-6900:1:exon

YP_007316885.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5332-6900:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Ser
so part of: sequence
location: complement(6873..6941)
location: region:6873-6941:-1
so has part: feature:6873-6941:-1:region

position:6873:-1
position: 6873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6941:-1
position: 6941
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6873-6941:-1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Asp
so part of: sequence
location: 6945..7012
location: region:6945-7012:1
so has part: feature:6945-7012:1:region

position:6945:1
position: 6945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7012:1
position: 7012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6945-7012:1:region

COX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: COX2
so part of: sequence
location: 7014..7697
location: region:7014-7697:1
so has part: feature:7014-7697:1:exon
subclass of: SO_0000010

14444632
type: Gene
SIO_000068: ncbigene

position:7014:1
position: 7014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7697:1
position: 7697
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7014-7697:1:exon

COX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: COX2
codon start: 1
transl table: 2
product: cytochrome c oxidase subunit II
translation: MAHPVQLGLQDATSPVMEELITFHDQALMAMFLISFLILYALSSTLTTKLTNTNITDAQEMETIWTILPAVILILIALPSLRILYMTDEINNPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLNPGDLRLLEVDNRVVLPIEAPVRMMITSQDVLHSWTIPTLGLKTDAVPGRLNQTVFTATRPGVYYGQCSEICGANHSFMPIVAELIPLKIFEMGPVFTL
SIO_010081: COX2
subclass of: SO_0000673
so part of: COX2
location: 7014..7697
location: region:7014-7697:1
so has part: feature:7014-7697:1:exon

YP_007316886.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7014-7697:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Lys
so part of: sequence
location: 7720..7784
location: region:7720-7784:1
so has part: feature:7720-7784:1:region

position:7720:1
position: 7720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7784:1
position: 7784
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7720-7784:1:region

ATP8
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ATP8
so part of: sequence
location: 7786..7992
location: region:7786-7992:1
so has part: feature:7786-7992:1:exon
subclass of: SO_0000010

14444633
type: Gene
SIO_000068: ncbigene

position:7786:1
position: 7786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7992:1
position: 7992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7786-7992:1:exon

ATP8
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ATP8
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 8
translation: MPQLDTSTWFTIIMAMLPTLYLITQLKLLSMNYYQPPLTKNPNLQTHNTCWRPKWTKTYLPHSQPQQS
SIO_010081: ATP8
subclass of: SO_0000673
so part of: ATP8
location: 7786..7992
location: region:7786-7992:1
so has part: feature:7786-7992:1:exon

YP_007316887.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7786-7992:1:exon

ATP6
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ATP6
so part of: sequence
location: 7947..8627
location: region:7947-8627:1
so has part: feature:7947-8627:1:exon
subclass of: SO_0000010

14444634
type: Gene
SIO_000068: ncbigene

position:7947:1
position: 7947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8627:1
position: 8627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7947-8627:1:exon

ATP6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ATP6
codon start: 1
transl table: 2
product: ATP synthase F0 subunit 6
translation: MNENLFTSFSAPTILGQPATIPIIMFPTLLIPTSKHLINNQLTTVQQNLIKLILKQMMAPHNAKGQSWSLMLMSLITFITMTNLLGLLPHSFTPTTQLSMNLAMAIPLWAGTIITGLRFKTKNFLAHMLPQGTPTPLIPMLVMIETVSLLIQPMALAVRLTANITAGHLLMHLIGNTMLTLSTINLSTTLLTSVLLMLLTILEIAVALIQAYVFTLLVNLYLHNNT
SIO_010081: ATP6
subclass of: SO_0000673
so part of: ATP6
location: 7947..8627
location: region:7947-8627:1
so has part: feature:7947-8627:1:exon

YP_007316888.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7947-8627:1:exon

COX3
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: COX3
so part of: sequence
location: 8627..9410
location: region:8627-9410:1
so has part: feature:8627-9410:1:exon
subclass of: SO_0000010

14444635
type: Gene
SIO_000068: ncbigene

position:9410:1
position: 9410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8627-9410:1:exon

COX3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: COX3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9410,aa:TERM)
transl table: 2
product: cytochrome c oxidase subunit III
translation: MTHQLHAYHMVKPSPWPLTGALSAFLLTSGLIMWFHFYSTALLTLGLLTNVLTMYQWWRDIIRESTYQGHHTMPVQKSLRYGMTLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVTITWAHHSLMNGNRKQTIQALLITILLGTYFTLLQISEYFEAPFTISDGIYGSTFFVATGFHGLHVIIGSTFLLICLIRQLFYHFTPSHHFGFEAAAWYWHFVDVIWLFLYISIYWWGS
SIO_010081: COX3
subclass of: SO_0000673
so part of: COX3
location: 8627..9410
location: region:8627-9410:1
so has part: feature:8627-9410:1:exon

YP_007316889.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8627-9410:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Gly
so part of: sequence
location: 9411..9478
location: region:9411-9478:1
so has part: feature:9411-9478:1:region

position:9411:1
position: 9411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9478:1
position: 9478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9411-9478:1:region

ND3
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ND3
so part of: sequence
location: 9479..9824
location: region:9479-9824:1
so has part: feature:9479-9824:1:exon
subclass of: SO_0000010

14444636
type: Gene
SIO_000068: ncbigene

position:9479:1
position: 9479
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9824:1
position: 9824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9479-9824:1:exon

ND3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ND3
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:9824,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 3
translation: MNLMLALTVNTLLTALLTIIMFWLPQLNSYAEKANPYECGFDPLNPARIPFSMKFFLVAITFLLFDLEIALLLSLPWALQTANLPTMIKTSIMFIIILALSLAYEWTQKGLDWTE
SIO_010081: ND3
subclass of: SO_0000673
so part of: ND3
location: 9479..9824
location: region:9479-9824:1
so has part: feature:9479-9824:1:exon

YP_007316890.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9479-9824:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Arg
so part of: sequence
location: 9825..9889
location: region:9825-9889:1
so has part: feature:9825-9889:1:region

position:9825:1
position: 9825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9889:1
position: 9889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9825-9889:1:region

ND4L
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ND4L
so part of: sequence
location: 9890..10186
location: region:9890-10186:1
so has part: feature:9890-10186:1:exon
subclass of: SO_0000010

14444637
type: Gene
SIO_000068: ncbigene

position:9890:1
position: 9890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10186:1
position: 10186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10186:1:exon

ND4L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ND4L
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 4L
translation: MTPTHMNITLAFTISLLGMLIYRSHLMASLLCLEGMMMSLFIMTAVMASNAHSPLINIMPIIMLVFAACEAAVGLALLVSISNTYGLDHINNLSLLQC
SIO_010081: ND4L
subclass of: SO_0000673
so part of: ND4L
location: 9890..10186
location: region:9890-10186:1
so has part: feature:9890-10186:1:exon

YP_007316891.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:9890-10186:1:exon

ND4
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ND4
so part of: sequence
location: 10180..11557
location: region:10180-11557:1
so has part: feature:10180-11557:1:exon
subclass of: SO_0000010

14444638
type: Gene
SIO_000068: ncbigene

position:10180:1
position: 10180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11557:1
position: 11557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10180-11557:1:exon

ND4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ND4
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:11557,aa:TERM)
transl table: 2
product: NADH dehydrogenase subunit 4
translation: MLKMVIPTTMLLPTTWLSKDSTIWINLTTHSLTISLIPLLFFNQTDNNLLSHSIHLSSDPLTTPLLTLTAWLLPLMIMASQYHLHNEPPSQKKLYLSMMIFLQITLILTFMATELIMFYILFETTLIPTLIIITKWGNQAERLNAGSYFLFYTLTGSLPLLIMLIYTYNKTGSLNTTLLTLTDQKLTTTWSHNLTWLACMMAFMTKLPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRFTSILNPLTEYMAYPFLMLSLWGMIMTSSTCLRQTDLKSLIAYSSVSHMALVIVASLIQTPWSFSGATILMVAHGLTSSMYFCLANSNYERTHSRIMLLSRGLQILLPLMTFWWFMASLTNLALPPTINLIGELFVIAASFSWSKITMILTGLNMLITALYSLHMFTTMQRGALTHHMTNMKPPFTRENTLMFLHLAPTILLSLNPNTILGLTP
SIO_010081: ND4
subclass of: SO_0000673
so part of: ND4
location: 10180..11557
location: region:10180-11557:1
so has part: feature:10180-11557:1:exon

YP_007316892.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:10180-11557:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-His
so part of: sequence
location: 11558..11626
location: region:11558-11626:1
so has part: feature:11558-11626:1:region

position:11558:1
position: 11558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11626:1
position: 11626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11558-11626:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Ser
so part of: sequence
location: 11627..11685
location: region:11627-11685:1
so has part: feature:11627-11685:1:region

position:11627:1
position: 11627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11685:1
position: 11685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11627-11685:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Leu
so part of: sequence
location: 11686..11756
location: region:11686-11756:1
so has part: feature:11686-11756:1:region

position:11686:1
position: 11686
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11756:1
position: 11756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11686-11756:1:region

ND5
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ND5
so part of: sequence
location: 11763..13568
location: region:11763-13568:1
so has part: feature:11763-13568:1:exon
subclass of: SO_0000010

14444639
type: Gene
SIO_000068: ncbigene

position:11763:1
position: 11763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:13568:1
position: 13568
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11763-13568:1:exon

ND5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ND5
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 5
translation: MYTSIMLMTLASLALPIFATLVNPNKTHSYPDYVKTTMMYAFITSLIPTTLYIFSNQETTIWSWHWMMTQTLDLTLSFKLDYFSMMFIPIALFITWSIMEFSLWYMSSDPNINQFFKYLLIFLITMLILITANNLFQLFIGWEGVGIMSFLLISWWHARTDANTAAIQAVLYNRIGDIGLILAMVWFLLHYNSWDFQQMLALNPHPSPLPLMGLLLAAVGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRFHPLMENDTLTQNLTLCLGAITTLFMAMCALTQNDIKKIVAFSTSSQLGLMMITIGINQPYLAFLHICTHAFFKAMLFICSGSIIHNLNNEQDIRKMGGLFKTMPLTSTSLIIGNLALTGMPFLTGFYSKDLIIEATSTSYTNAWALSITLIATSLTSAYSTRTILLTLTGQPRFPTLTNINENNPALLNPIKRLTTASMITGFLITNNIPPTSLPQPTMPLHLKLLALYMTALGFIITLDLTLMTNKLKVKTPPQAFKFSNMLGYFPTIAHRMIPHQNLLMSQNLALLLLDSMWLEKSMPKMISQTHITASTTVTAQKSMIKLYFLSFLIPLALTLLLMV
SIO_010081: ND5
subclass of: SO_0000673
so part of: ND5
location: 11763..13568
location: region:11763-13568:1
so has part: feature:11763-13568:1:exon

YP_007316893.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:11763-13568:1:exon

ND6
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: ND6
so part of: sequence
location: complement(13569..14093)
location: region:13569-14093:-1
so has part: feature:13569-14093:-1:exon
subclass of: SO_0000010

14444640
type: Gene
SIO_000068: ncbigene

position:13569:-1
position: 13569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14093:-1
position: 14093
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13569-14093:-1:exon

ND6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: ND6
codon start: 1
transl table: 2
product: NADH dehydrogenase subunit 6
translation: MTYVLFTLSVMLVMGFVGFSSKPSPIYGGLALVVSGVVGCMIILNYGGAYLGLVMFLIYLGGMMVVFGYTAAMAIEEYPETWGSGFEVLACFLVGLMMEVGLVLWVLDFDEVVVMVGFNDMGNWVVFEGEGSGLVRSDSIGAGALYDYGRWLVVVAGWTLFVGVYVVIEITRGN
SIO_010081: ND6
subclass of: SO_0000673
so part of: ND6
location: complement(13569..14093)
location: region:13569-14093:-1
so has part: feature:13569-14093:-1:exon

YP_007316894.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:13569-14093:-1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Glu
so part of: sequence
location: complement(14094..14162)
location: region:14094-14162:-1
so has part: feature:14094-14162:-1:region

position:14094:-1
position: 14094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:14162:-1
position: 14162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14094-14162:-1:region

CYTB
type: Gene
subclass of: SO_0000704
RO_0002162: 9555
gene: CYTB
so part of: sequence
location: 14168..15308
location: region:14168-15308:1
so has part: feature:14168-15308:1:exon
subclass of: SO_0000010

14444641
type: Gene
SIO_000068: ncbigene

position:14168:1
position: 14168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15308:1
position: 15308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14168-15308:1:exon

CYTB
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9555
gene: CYTB
note: TAA stop codon is completed by the addition of 3' A residues to the mRNA
codon start: 1
transl except: (pos:15308,aa:TERM)
transl table: 2
product: cytochrome b
translation: MTPMRKSNPIMKMINHSFIDLPTPSNISIWWNFGSLLATCLILQIITGLFLAMHYSPDTSSAFSSIAHITRDVNYGWTIRYLHANGASMLFICLFLHVGRGLYYGSYLLLKTWNIGIMLLLMTMTTAFMGYVLPWGQMSFWGATVITNLLSAVPYIGTNLVQWVWGGPAIDNPTLMRFFTLHFILPFGIVALTIVHLLFLHETGSNNPCGISSDPDKITFHPYYTTKDILGVALLLLALMTLTLFSPDLLNDPDNYTPADPLNTPPHIKPEWYFLFAYAILRSVPNKLGGVLALFLSILILAAIPMLHKSKQQSMMFRPLSQFLFWLLATTLLTLTWIGSQPVIQPLTTIGQVASMVYFLTTLVLMPLAAQVENNLLKWT
SIO_010081: CYTB
subclass of: SO_0000673
so part of: CYTB
location: 14168..15308
location: region:14168-15308:1
so has part: feature:14168-15308:1:exon

YP_007316895.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14168-15308:1:exon

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Thr
so part of: sequence
location: 15309..15372
location: region:15309-15372:1
so has part: feature:15309-15372:1:region

position:15309:1
position: 15309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15372:1
position: 15372
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15309-15372:1:region

tRNA
type: Transfer RNA
subclass of: SO_0000253
RO_0002162: 9555
product: tRNA-Pro
so part of: sequence
location: complement(15374..15441)
location: region:15374-15441:-1
so has part: feature:15374-15441:-1:region

position:15374:-1
position: 15374
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15441:-1
position: 15441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15374-15441:-1:region

D-loop
type: Displacement Loop
subclass of: SO_0000297
RO_0002162: 9555
so part of: sequence
location: 15442..16499
location: region:15442-16499:1
so has part: feature:15442-16499:1:region

position:15442:1
position: 15442
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:16499:1
position: 16499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15442-16499:1:region