Burkholderia stabilis isolate E chromosome III, complete sequence.
Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.
Submitted (27-NOV-2017) Functional Genomics Genter Zurich, University Hospital Basel, 4056 Basel, Switzerland
REFSEQ INFORMATION: The reference sequence is identical to\nLR025744.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 12/25/2022 04:48:55\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 7,864\nCDSs (total) :: 7,772\nGenes (coding) :: 7,694\nCDSs (with protein) :: 7,694\nGenes (RNA) :: 92\nrRNAs :: 6, 6, 6 (5S, 16S, 23S)\ncomplete rRNAs :: 6, 6, 6 (5S, 16S, 23S)\ntRNAs :: 70\nncRNAs :: 4\nPseudo Genes (total) :: 78\nCDSs (without protein) :: 78\nPseudo Genes (ambiguous residues) :: 0 of 78\nPseudo Genes (frameshifted) :: 27 of 78\nPseudo Genes (incomplete) :: 65 of 78\nPseudo Genes (internal stop) :: 7 of 78\nPseudo Genes (multiple problems) :: 17 of 78\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: similar to AA sequence:RefSeq:WP_013722113.1
GO:0004803 - transposase activity [Evidence IEA]
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF015366.2
tripartite tricarboxylate transporter substrate-binding protein
Bug family tripartite tricarboxylate transporter substrate binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011802516.1
GO:0016034 - maleylacetoacetate isomerase activity [Evidence IEA]
GO:0006559 - L-phenylalanine catabolic process [Evidence IEA]; GO:0006572 - tyrosine catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_019430696.1
fumarylacetoacetate hydrolase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012348671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011801859.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006749 - glutathione metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011801860.1
2-hydroxychromene-2-carboxylate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_017776858.1
GO:0016829 - lyase activity [Evidence IEA]
dihydrodipicolinate synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011801862.1
COORDINATES: similar to AA sequence:RefSeq:WP_011475381.1
COORDINATES: similar to AA sequence:RefSeq:WP_011117403.1
COORDINATES: similar to AA sequence:RefSeq:WP_032489819.1
GO:0016491 - oxidoreductase activity [Evidence IEA]
1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase NagB
COORDINATES: similar to AA sequence:RefSeq:WP_011806224.1
naphthalene 1,2-dioxygenase system small oxygenase NagAd
COORDINATES: similar to AA sequence:RefSeq:WP_026437498.1
naphthalene 1,2-dioxygenase system large oxygenase NagAc
COORDINATES: similar to AA sequence:RefSeq:WP_011806222.1
naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase systems ferredoxin NagAb
COORDINATES: similar to AA sequence:RefSeq:WP_011801869.1
dalicylate 5-hydroxylase small oxygenase NagH
COORDINATES: similar to AA sequence:RefSeq:WP_026437495.1
GO:0051537 - 2 iron, 2 sulfur cluster binding [Evidence IEA]
salicylate 5-hydroxylase large oxygenase NagG
COORDINATES: similar to AA sequence:RefSeq:WP_032489817.1
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011235976.1
COORDINATES: similar to AA sequence:RefSeq:WP_012213993.1
IS21-like element ISBmu1 family helper ATPase IstB
COORDINATES: protein motif:HMM:NF012339.2
2Fe-2S iron-sulfur cluster binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_026437493.1
naphthalene degradation transcriptional regulator NagR
COORDINATES: similar to AA sequence:RefSeq:WP_011803827.1
GO:0007165 - signal transduction [Evidence IEA]
internal stop; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011516073.1
outer membrane protein transport protein
COORDINATES: similar to AA sequence:RefSeq:WP_011516074.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
naphthalene 1,2-dioxygenase/salicylate 5-hydroxylase systems ferredoxin--NAD(P)(+) reductase NagAa
COORDINATES: similar to AA sequence:RefSeq:WP_015016057.1
COORDINATES: similar to AA sequence:RefSeq:WP_018715156.1
GO:0009316 - 3-isopropylmalate dehydratase complex [Evidence IEA]
GO:0003861 - 3-isopropylmalate dehydratase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
3-isopropylmalate dehydratase small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014725194.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012761971.1
COORDINATES: similar to AA sequence:RefSeq:WP_004626857.1
COORDINATES: similar to AA sequence:RefSeq:WP_012492354.1
programmed frameshift; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011481946.1
COORDINATES: similar to AA sequence:RefSeq:WP_017524100.1
COORDINATES: similar to AA sequence:RefSeq:WP_012345826.1
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_017234233.1
COORDINATES: similar to AA sequence:RefSeq:WP_013397094.1
ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006222494.1
GO:0047922 - gentisate 1,2-dioxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011801857.1
COORDINATES: similar to AA sequence:RefSeq:WP_011487167.1
2Fe-2S iron-sulfur cluster-binding protein
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: protein motif:HMM:NF012296.2
COORDINATES: protein motif:HMM:NF015431.2
COORDINATES: similar to AA sequence:RefSeq:WP_059669267.1
frameshifted; incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_008905391.1
COORDINATES: similar to AA sequence:RefSeq:WP_008905390.1
COORDINATES: similar to AA sequence:RefSeq:WP_008905389.1
COORDINATES: similar to AA sequence:RefSeq:WP_008905388.1
CaiB/BaiF CoA-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_008905387.1
COORDINATES: similar to AA sequence:RefSeq:WP_008905386.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014564.2
COORDINATES: similar to AA sequence:RefSeq:WP_011517431.1
IS4-like element ISBvi1 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_011660115.1
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
heavy metal response regulator transcription factor
COORDINATES: similar to AA sequence:RefSeq:WP_006495805.1
GO:0000155 - phosphorelay sensor kinase activity [Evidence IEA]; GO:0004673 - protein histidine kinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018421954.1
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:NF025028.2
COORDINATES: similar to AA sequence:RefSeq:WP_006487509.1
COORDINATES: similar to AA sequence:RefSeq:WP_006410174.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661403.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481264.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349769.1
COORDINATES: similar to AA sequence:RefSeq:WP_006493986.1
LLM class flavin-dependent oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_015604126.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493734.1
GO:0030151 - molybdenum ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012336737.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545446.1
COORDINATES: similar to AA sequence:RefSeq:WP_006758215.1
COORDINATES: protein motif:HMM:NF013257.2
COORDINATES: similar to AA sequence:RefSeq:WP_011351512.1
serine hydrolase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011351513.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351514.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351515.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351517.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351518.1
GO:0022857 - transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012328556.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351520.1
COORDINATES: similar to AA sequence:RefSeq:WP_011351521.1
MotA/TolQ/ExbB proton channel family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011351522.1
GO:0015291 - secondary active transmembrane transporter activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011351523.1
COORDINATES: similar to AA sequence:RefSeq:WP_016832083.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612015.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0004803 - transposase activity [Evidence IEA]
GO:0006313 - transposition, DNA-mediated [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012901.2
acyltransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_007178210.1
COORDINATES: protein motif:HMM:NF012873.2
COORDINATES: protein motif:HMM:NF000586.1
COORDINATES: similar to AA sequence:RefSeq:WP_012329084.1
COORDINATES: protein motif:HMM:NF012935.2
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016614 - oxidoreductase activity, acting on CH-OH group of donors [Evidence IEA]
GMC family oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019560262.1
GO:0004591 - oxoglutarate dehydrogenase (succinyl-transferring) activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
2-oxoglutarate dehydrogenase E1 component
COORDINATES: similar to AA sequence:RefSeq:WP_014900266.1
COORDINATES: similar to AA sequence:RefSeq:WP_006387069.1
COORDINATES: protein motif:HMM:NF015437.2
LuxR C-terminal-related transcriptional regulator
COORDINATES: protein motif:HMM:NF023508.2
COORDINATES: protein motif:HMM:NF012382.2
PLP-dependent aminotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_020203869.1
COORDINATES: protein motif:HMM:NF014567.2
COORDINATES: similar to AA sequence:RefSeq:WP_013696100.1
COORDINATES: similar to AA sequence:RefSeq:WP_013089494.1
COORDINATES: similar to AA sequence:RefSeq:WP_010117636.1
COORDINATES: similar to AA sequence:RefSeq:WP_012338875.1
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]
COORDINATES: protein motif:HMM:NF015831.2
COORDINATES: protein motif:HMM:NF012301.2
COORDINATES: protein motif:HMM:NF027429.2
COORDINATES: similar to AA sequence:RefSeq:WP_012336742.1
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_076611267.1
COORDINATES: protein motif:HMM:NF013884.2
COORDINATES: similar to AA sequence:RefSeq:WP_011711650.1
incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF036516.2
COORDINATES: protein motif:HMM:NF016693.2
COORDINATES: protein motif:HMM:NF036537.2
COORDINATES: protein motif:HMM:NF024306.2
COORDINATES: similar to AA sequence:RefSeq:WP_014972840.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008134 - transcription factor binding [Evidence IEA]
sigma 54-interacting transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011349764.1
COORDINATES: similar to AA sequence:RefSeq:WP_018314448.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349766.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046741.1
COORDINATES: protein motif:HMM:NF012596.2
enoyl-CoA hydratase/isomerase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_009899575.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490535.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497594.1
formate/nitrite transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011549110.1
COORDINATES: similar to AA sequence:RefSeq:WP_006485545.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498064.1
GO:0004039 - allophanate hydrolase activity [Evidence IEA]
GO:0019627 - urea metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006485552.1
GO:0004847 - urea carboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017774959.1
urea carboxylase-associated family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006485567.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00442
guanidine-I (ykkC/yxkD leader) riboswitch; Guanidine-I riboswitches control genes whose products are involved in modification or pumping out guanidine as a toxic compound from bacteria; This is class of guanidine riboswitches is based on the ykkC/yxkD leader; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014725535.1
COORDINATES: similar to AA sequence:RefSeq:WP_012404573.1
COORDINATES: similar to AA sequence:RefSeq:WP_012365728.1
Crp/Fnr family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011548866.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755498.1
COORDINATES: similar to AA sequence:RefSeq:WP_006413573.1
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012328534.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548858.1
COORDINATES: similar to AA sequence:RefSeq:WP_006413608.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755264.1
COORDINATES: similar to AA sequence:RefSeq:WP_006413543.1
COORDINATES: similar to AA sequence:RefSeq:WP_011548855.1
GO:0006629 - lipid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006755267.1
GO:0019867 - outer membrane [Evidence IEA]
glycine zipper 2TM domain-containing protein
COORDINATES: protein motif:HMM:NF012799.2
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006224248.1
COORDINATES: similar to AA sequence:RefSeq:WP_013092058.1
COORDINATES: similar to AA sequence:RefSeq:WP_009914848.1
COORDINATES: similar to AA sequence:RefSeq:WP_020065086.1
COORDINATES: protein motif:HMM:NF025917.2
COORDINATES: protein motif:HMM:NF019236.2
right-handed parallel beta-helix repeat-containing protein
COORDINATES: protein motif:HMM:NF012699.2
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: similar to AA sequence:RefSeq:WP_013521042.1
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: protein motif:HMM:NF024206.2
ankyrin repeat domain-containing protein
COORDINATES: protein motif:HMM:NF012698.2
COORDINATES: similar to AA sequence:RefSeq:WP_004524329.1
type III secretion system outer membrane ring subunit SctC
COORDINATES: similar to AA sequence:RefSeq:WP_010119334.1
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012733112.1
GO:0030254 - protein secretion by the type III secretion system [Evidence IEA]
type III secretion system export apparatus subunit SctT
COORDINATES: protein motif:HMM:NF021035.2
COORDINATES: similar to AA sequence:RefSeq:WP_013428964.1
GO:0030257 - type III protein secretion system complex [Evidence IEA]
GO:0046961 - proton-transporting ATPase activity, rotational mechanism [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006047125.1
type III secretion system stator protein SctL
COORDINATES: protein motif:HMM:NF021051.2
COORDINATES: similar to AA sequence:RefSeq:WP_007579488.1
type III secretion inner membrane ring lipoprotein SctJ
COORDINATES: protein motif:HMM:NF021036.2
COORDINATES: similar to AA sequence:RefSeq:WP_020070017.1
HrpB1 family type III secretion system apparatus protein
COORDINATES: similar to AA sequence:RefSeq:WP_007579485.1
type III secretion system export apparatus subunit SctU
COORDINATES: similar to AA sequence:RefSeq:WP_013341117.1
GO:0009306 - protein secretion [Evidence IEA]
type III secretion system export apparatus subunit SctV
COORDINATES: protein motif:HMM:TIGR02557.2
COORDINATES: protein motif:HMM:TIGR02551.1
type III secretion system cytoplasmic ring protein SctQ
COORDINATES: similar to AA sequence:RefSeq:WP_004524345.1
type III secretion system export apparatus subunit SctR
COORDINATES: similar to AA sequence:RefSeq:WP_013689080.1
type III secretion system export apparatus subunit SctS
COORDINATES: similar to AA sequence:RefSeq:WP_017335183.1
CesT family type III secretion system chaperone
COORDINATES: similar to AA sequence:RefSeq:WP_018422062.1
GO:0016742 - hydroxymethyl-, formyl- and related transferase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016258.2
outer membrane protein assembly factor BamE
COORDINATES: similar to AA sequence:RefSeq:WP_004528701.1
COORDINATES: protein motif:HMM:NF021623.2
COORDINATES: protein motif:HMM:NF024675.2
COORDINATES: protein motif:HMM:NF022362.2
COORDINATES: similar to AA sequence:RefSeq:WP_017772279.1
lytic transglycosylase domain-containing protein
GO:0000160 - phosphorelay signal transduction system [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
winged helix-turn-helix domain-containing protein
COORDINATES: protein motif:HMM:NF019310.2
COORDINATES: similar to AA sequence:RefSeq:WP_018314928.1
SDR family NAD(P)-dependent oxidoreductase
COORDINATES: protein motif:HMM:NF018234.2
COORDINATES: similar to AA sequence:RefSeq:WP_006384472.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF013775.2
COORDINATES: similar to AA sequence:RefSeq:WP_011295973.1
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011295974.1
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:NF019349.2
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
COORDINATES: protein motif:HMM:NF013094.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:NP_215851.1
COORDINATES: similar to AA sequence:RefSeq:WP_018421654.1
GO:0020037 - heme binding [Evidence IEA]; GO:0004833 - tryptophan 2,3-dioxygenase activity [Evidence IEA]
GO:0019441 - tryptophan catabolic process to kynurenine [Evidence IEA]
tryptophan 2,3-dioxygenase family protein
COORDINATES: protein motif:HMM:NF013646.2
COORDINATES: similar to AA sequence:RefSeq:WP_012336870.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372407.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661238.1
GO:0015343 - siderophore-iron transmembrane transporter activity [Evidence IEA]
GO:0015891 - siderophore transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006486292.1
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_004537325.1
COORDINATES: similar to AA sequence:RefSeq:WP_006486287.1
COORDINATES: similar to AA sequence:RefSeq:WP_009908183.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549050.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880526.1
TadE/TadG family type IV pilus assembly protein
COORDINATES: similar to AA sequence:RefSeq:WP_012372339.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661166.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549054.1
type II and III secretion system protein family protein
COORDINATES: similar to AA sequence:RefSeq:WP_015603420.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498089.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483615.1
GO:0004190 - aspartic-type endopeptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012336895.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349893.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349894.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493711.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336897.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498084.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661156.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349899.1
COORDINATES: protein motif:HMM:NF023725.2
COORDINATES: similar to AA sequence:RefSeq:WP_011549067.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336902.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493709.1
COORDINATES: similar to AA sequence:RefSeq:WP_006491160.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498077.1
LysR substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012336906.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549073.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349903.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349906.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011349907.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498055.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880541.1
COORDINATES: similar to AA sequence:RefSeq:WP_006485550.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336866.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399280.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349940.1
COORDINATES: similar to AA sequence:RefSeq:WP_012433083.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349941.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]
GO:0042301 - phosphate ion binding [Evidence IEA]
GO:0035435 - phosphate ion transmembrane transport [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: similar to AA sequence:RefSeq:WP_009915794.1
COORDINATES: similar to AA sequence:RefSeq:WP_014725779.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
sigma-70 family RNA polymerase sigma factor
COORDINATES: similar to AA sequence:RefSeq:WP_008920492.1
GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_008920493.1
COORDINATES: protein motif:HMM:NF024109.2
COORDINATES: protein motif:HMM:NF020904.2
COORDINATES: protein motif:HMM:NF025052.2
COORDINATES: similar to AA sequence:RefSeq:WP_012372319.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336984.1
GO:0009380 - excinuclease repair complex [Evidence IEA]
GO:0009381 - excinuclease ABC activity [Evidence IEA]
GO:0006289 - nucleotide-excision repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_003262721.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372277.1
COORDINATES: similar to AA sequence:RefSeq:WP_006026578.1
COORDINATES: protein motif:HMM:NF017476.2
COORDINATES: similar to AA sequence:RefSeq:WP_011694953.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336989.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350066.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350067.1
COORDINATES: similar to AA sequence:RefSeq:WP_006025318.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350069.1
COORDINATES: protein motif:HMM:NF012312.2
COORDINATES: similar to AA sequence:RefSeq:WP_017329265.1
COORDINATES: similar to AA sequence:RefSeq:WP_006754572.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545696.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372109.1
GO:0005215 - transporter activity [Evidence IEA]
efflux RND transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011545698.1
GO:0009279 - cell outer membrane [Evidence IEA]
GO:0015288 - porin activity [Evidence IEA]
efflux transporter outer membrane subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012372111.1
COORDINATES: similar to AA sequence:RefSeq:WP_006411957.1
COORDINATES: similar to AA sequence:RefSeq:WP_007743100.1
COORDINATES: similar to AA sequence:RefSeq:WP_008349595.1
COORDINATES: similar to AA sequence:RefSeq:WP_006759784.1
COORDINATES: similar to AA sequence:RefSeq:WP_012338628.1
COORDINATES: similar to AA sequence:RefSeq:WP_006493483.1
nuclear transport factor 2 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012372295.1
COORDINATES: similar to AA sequence:RefSeq:WP_012365710.1
COORDINATES: similar to AA sequence:RefSeq:WP_007577318.1
outer membrane protein assembly factor BamA
COORDINATES: similar to AA sequence:RefSeq:WP_017774724.1
COORDINATES: similar to AA sequence:RefSeq:WP_007177709.1
internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_007736297.1
COORDINATES: similar to AA sequence:RefSeq:WP_007736296.1
COORDINATES: similar to AA sequence:RefSeq:WP_013690352.1
COORDINATES: protein motif:HMM:NF012257.2
COORDINATES: similar to AA sequence:RefSeq:WP_020425386.1
COORDINATES: similar to AA sequence:RefSeq:WP_013212016.1
COORDINATES: similar to AA sequence:RefSeq:WP_013209627.1
COORDINATES: similar to AA sequence:RefSeq:WP_017330403.1
glutathione S-transferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006159306.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336998.1
glycine betaine/L-proline transporter ProP
COORDINATES: similar to AA sequence:RefSeq:WP_011350121.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493692.1
COORDINATES: similar to AA sequence:RefSeq:WP_014726257.1
TRAP transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011350131.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350132.1
GO:0004400 - histidinol-phosphate transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011350133.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483392.1
NAD-dependent epimerase/dehydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006483393.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483369.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481154.1
COORDINATES: similar to AA sequence:RefSeq:WP_006759807.1
COORDINATES: similar to AA sequence:RefSeq:WP_008918897.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497987.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337031.1
GO:0006865 - amino acid transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006483359.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350158.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350159.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549225.1
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006415147.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011350162.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497984.1
saccharopine dehydrogenase NADP-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006483364.1
acetoacetate decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011549230.1
COORDINATES: similar to AA sequence:RefSeq:WP_006404907.1
COORDINATES: similar to AA sequence:RefSeq:WP_006754675.1
COORDINATES: similar to AA sequence:RefSeq:WP_015016211.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350168.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350184.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483387.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337037.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350197.1
COORDINATES: similar to AA sequence:RefSeq:WP_007182917.1
IS5-like element ISBmu23 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_004544985.1
COORDINATES: similar to AA sequence:RefSeq:WP_006479795.1
aminotransferase class V-fold PLP-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_011350203.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497973.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549244.1
GO:0051007 - squalene-hopene cyclase activity [Evidence IEA]
GO:0019746 - hopanoid biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011549250.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481127.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337056.1
COORDINATES: similar to AA sequence:RefSeq:WP_006485182.1
COORDINATES: protein motif:HMM:NF012422.2
COORDINATES: similar to AA sequence:RefSeq:WP_011350212.1
polyamine ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011350213.1
COORDINATES: similar to AA sequence:RefSeq:WP_012430448.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350215.1
COORDINATES: similar to AA sequence:RefSeq:WP_011489762.1
GO:0004629 - phospholipase C activity [Evidence IEA]
phospholipase C, phosphocholine-specific
COORDINATES: similar to AA sequence:RefSeq:WP_011350217.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350218.1
LamG-like jellyroll fold domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012337063.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497949.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497948.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549262.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481116.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337068.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880630.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350226.1
glycoside hydrolase family 2 TIM barrel-domain containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011549265.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350230.1
beta-propeller fold lactonase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006416949.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880640.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549276.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011549277.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484842.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350246.1
GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006219875.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484823.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399174.1
helix-turn-helix domain-containing GNAT family N-acetyltransferase
COORDINATES: protein motif:HMM:NF018684.2
COORDINATES: similar to AA sequence:RefSeq:WP_006402789.1
COORDINATES: similar to AA sequence:RefSeq:WP_006411182.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484848.1
COORDINATES: similar to AA sequence:RefSeq:WP_006405387.1
COORDINATES: similar to AA sequence:RefSeq:WP_006760669.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350266.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_006484839.1
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
succinylglutamate desuccinylase/aspartoacylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011350286.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497915.1
COORDINATES: similar to AA sequence:RefSeq:WP_006485862.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767071.1
COORDINATES: similar to AA sequence:RefSeq:WP_006760672.1
COORDINATES: similar to AA sequence:RefSeq:WP_006485861.1
GO:0009288 - bacterial-type flagellum [Evidence IEA]
GO:0007155 - cell adhesion [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006481056.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490959.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490949.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399212.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399213.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490947.1
COORDINATES: similar to AA sequence:RefSeq:WP_011659875.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337107.1
COORDINATES: similar to AA sequence:RefSeq:WP_004525454.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350320.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0003955 - NAD(P)H dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006490956.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372191.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337109.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350324.1
COORDINATES: similar to AA sequence:RefSeq:WP_011519598.1
GO:0030429 - kynureninase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011350326.1
COORDINATES: similar to AA sequence:RefSeq:WP_008646199.1
GO:0000334 - 3-hydroxyanthranilate 3,4-dioxygenase activity [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013590351.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350329.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350330.1
GO:0008701 - 4-hydroxy-2-oxovalerate aldolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011350331.1
GO:0008774 - acetaldehyde dehydrogenase (acetylating) activity [Evidence IEA]
acetaldehyde dehydrogenase (acetylating)
COORDINATES: similar to AA sequence:RefSeq:WP_011350332.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350333.1
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [Evidence IEA]
2-hydroxymuconic semialdehyde dehydrogenase
COORDINATES: similar to AA sequence:RefSeq:WP_011350334.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350335.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350336.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350337.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350338.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350339.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350340.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350341.1
COORDINATES: similar to AA sequence:RefSeq:WP_012432510.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350343.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350344.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350345.1
COORDINATES: similar to AA sequence:RefSeq:WP_008646197.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350347.1
COORDINATES: similar to AA sequence:RefSeq:WP_008645564.1
GO:0009055 - electron transfer activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006481040.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549314.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490970.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350361.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350362.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350363.1
COORDINATES: similar to AA sequence:RefSeq:WP_004525489.1
COORDINATES: similar to AA sequence:RefSeq:WP_006411185.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660946.1
COORDINATES: similar to AA sequence:RefSeq:WP_010112773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350368.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0015417 - ABC-type polyamine transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0015846 - polyamine transport [Evidence IEA]
polyamine ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011350369.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660942.1
COORDINATES: similar to AA sequence:RefSeq:WP_004206816.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497886.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350373.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549319.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497884.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549321.1
COORDINATES: similar to AA sequence:RefSeq:WP_014726283.1
branched-chain amino acid ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011549323.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490961.1
FAD-binding and (Fe-S)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006490965.1
COORDINATES: similar to AA sequence:RefSeq:WP_006749763.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490923.1
COORDINATES: protein motif:HMM:NF024910.2
COORDINATES: similar to AA sequence:RefSeq:WP_018437007.1
GO:0006790 - sulfur compound metabolic process [Evidence IEA]
SfnB family sulfur acquisition oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_006399272.1
GO:0010181 - FMN binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011660916.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490946.1
COORDINATES: similar to AA sequence:RefSeq:WP_004635003.1
GO:0050660 - flavin adenine dinucleotide binding [Evidence IEA]; GO:0016627 - oxidoreductase activity, acting on the CH-CH group of donors [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011350402.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493661.1
COORDINATES: similar to AA sequence:RefSeq:WP_006491299.1
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006491300.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497875.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489684.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497874.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497873.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489680.1
COORDINATES: similar to AA sequence:RefSeq:WP_006493536.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497871.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489633.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493659.1
COORDINATES: similar to AA sequence:RefSeq:WP_011355217.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489630.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497866.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489638.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347104.1
COORDINATES: protein motif:HMM:NF012264.2
COORDINATES: protein motif:HMM:NF013739.2
COORDINATES: protein motif:HMM:NF012655.2
COORDINATES: similar to AA sequence:RefSeq:WP_011350406.1
MaoC family dehydratase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006481010.1
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006399334.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481008.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337147.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350411.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337149.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497847.1
GO:0030151 - molybdenum ion binding [Evidence IEA]
GO:0009399 - nitrogen fixation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_004201167.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489069.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489074.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549355.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335397.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497842.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497841.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337157.1
COORDINATES: similar to AA sequence:RefSeq:WP_006399349.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660886.1
GO:0007059 - chromosome segregation [Evidence IEA]; GO:0000910 - cytokinesis [Evidence IEA]
ParB/RepB/Spo0J family partition protein
COORDINATES: similar to AA sequence:RefSeq:WP_006753023.1
COORDINATES: similar to AA sequence:RefSeq:WP_006411406.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660884.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480991.1
GO:0004019 - adenylosuccinate synthase activity [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011660882.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489094.1
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]; GO:0005488 - binding [Evidence IEA]
GO:0042918 - alkanesulfonate transport [Evidence IEA]
aliphatic sulfonate ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_011349224.1
COORDINATES: protein motif:HMM:NF024996.2
COORDINATES: similar to AA sequence:RefSeq:WP_011349226.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489075.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349300.1
COORDINATES: similar to AA sequence:RefSeq:WP_012329143.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483510.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483503.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349304.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337171.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372114.1
COORDINATES: similar to AA sequence:RefSeq:WP_006411387.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493822.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767020.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549376.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217786.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483693.1
COORDINATES: similar to AA sequence:RefSeq:WP_011694978.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480976.1
GO:0004062 - aryl sulfotransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006483694.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337180.1
gamma-glutamyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011349318.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549383.1
COORDINATES: similar to AA sequence:RefSeq:WP_015585268.1
COORDINATES: similar to AA sequence:RefSeq:WP_007852375.1
COORDINATES: similar to AA sequence:RefSeq:WP_012748773.1
COORDINATES: similar to AA sequence:RefSeq:WP_011300839.1
COORDINATES: similar to AA sequence:RefSeq:WP_018903705.1
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: similar to AA sequence:RefSeq:WP_013341347.1
GO:0042597 - periplasmic space [Evidence IEA]
GO:0030058 - amine dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF018942.2
MauE/DoxX family redox-associated membrane protein
COORDINATES: similar to AA sequence:RefSeq:WP_013341345.1
methylamine dehydrogenase accessory protein MauD
COORDINATES: similar to AA sequence:RefSeq:WP_006409135.1
COORDINATES: similar to AA sequence:RefSeq:WP_011659444.1
COORDINATES: similar to AA sequence:RefSeq:WP_012468031.1
COORDINATES: protein motif:HMM:NF024242.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006487941.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349325.1
COORDINATES: similar to AA sequence:RefSeq:WP_006405536.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217789.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217790.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372099.1
COORDINATES: similar to AA sequence:RefSeq:WP_006480968.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00177
Derived by automated computational analysis using gene prediction method: cmsearch.
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: nucleotide motif:Rfam:14.4:RF02541
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: similar to AA sequence:RefSeq:WP_006483647.1
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012337187.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498613.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349339.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349340.1
GO:0008483 - transaminase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011349341.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349343.1
COORDINATES: similar to AA sequence:RefSeq:WP_006412360.1
COORDINATES: similar to AA sequence:RefSeq:WP_006483642.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660855.1
GO:0016747 - acyltransferase activity, transferring groups other than amino-acyl groups [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012217798.1
COORDINATES: similar to AA sequence:RefSeq:WP_020065405.1
COORDINATES: similar to AA sequence:RefSeq:WP_014725527.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335435.1
GO:0017113 - dihydropyrimidine dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006210 - thymine catabolic process [Evidence IEA]; GO:0006212 - uracil catabolic process [Evidence IEA]
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA
COORDINATES: similar to AA sequence:RefSeq:WP_006485642.1
NCS1 family nucleobase:cation symporter-1
COORDINATES: similar to AA sequence:RefSeq:WP_006485639.1
GO:0004157 - dihydropyrimidinase activity [Evidence IEA]
GO:0008152 - metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006485647.1
NupC/NupG family nucleoside CNT transporter
COORDINATES: similar to AA sequence:RefSeq:WP_012337200.1
GO:0009032 - thymidine phosphorylase activity [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006485641.1
GO:0004126 - cytidine deaminase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0009972 - cytidine deamination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011545782.1
aromatic ring-hydroxylating dioxygenase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_006481493.1
GO:0033744 - L-methionine:thioredoxin-disulfide S-oxidoreductase activity [Evidence IEA]; GO:0008113 - peptide-methionine (S)-S-oxide reductase activity [Evidence IEA]
GO:0030091 - protein repair [Evidence IEA]; GO:0006979 - response to oxidative stress [Evidence IEA]
peptide-methionine (S)-S-oxide reductase MsrA
COORDINATES: similar to AA sequence:RefSeq:WP_006498597.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217807.1
GO:0033743 - peptide-methionine (R)-S-oxide reductase activity [Evidence IEA]
peptide-methionine (R)-S-oxide reductase MsrB
COORDINATES: similar to AA sequence:RefSeq:WP_011349512.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349513.1
COORDINATES: similar to AA sequence:RefSeq:WP_006479394.1
GO:0015562 - efflux transmembrane transporter activity [Evidence IEA]
GO:0055085 - transmembrane transport [Evidence IEA]; GO:0042908 - xenobiotic transport [Evidence IEA]
multidrug efflux RND transporter permease subunit
COORDINATES: similar to AA sequence:RefSeq:WP_006489047.1
COORDINATES: similar to AA sequence:RefSeq:WP_014725601.1,RefSeq:WP_018904192.1
frameshifted; incomplete; partial in the middle of a contig; missing N-terminus and C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_006749922.1
COORDINATES: similar to AA sequence:RefSeq:WP_006029550.1
sugar ABC transporter ATP-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_006029551.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489168.1
substrate-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_019572533.1
COORDINATES: similar to AA sequence:RefSeq:WP_011549909.1
COORDINATES: similar to AA sequence:RefSeq:WP_009900254.1
COORDINATES: similar to AA sequence:RefSeq:WP_006412816.1
COORDINATES: similar to AA sequence:RefSeq:WP_014895900.1
COORDINATES: similar to AA sequence:RefSeq:WP_076612184.1
GO:0015074 - DNA integration [Evidence IEA]
integrase core domain-containing protein
COORDINATES: protein motif:HMM:NF015862.2
COORDINATES: similar to AA sequence:RefSeq:WP_014898993.1
sugar dehydrogenase complex small subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014898994.1
COORDINATES: similar to AA sequence:RefSeq:WP_011350031.1
COORDINATES: similar to AA sequence:RefSeq:WP_017333010.1
replication-associated recombination protein A
COORDINATES: similar to AA sequence:RefSeq:WP_013093098.1
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: similar to AA sequence:RefSeq:WP_010098209.1
COORDINATES: similar to AA sequence:RefSeq:WP_006752586.1
COORDINATES: similar to AA sequence:RefSeq:WP_006396729.1
COORDINATES: similar to AA sequence:RefSeq:WP_006222288.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176066.1
NAD(P)-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011354330.1
COORDINATES: protein motif:HMM:NF020130.2
COORDINATES: protein motif:HMM:TIGR01536.1
GO:0004066 - asparagine synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006529 - asparagine biosynthetic process [Evidence IEA]
asparagine synthase (glutamine-hydrolyzing)
COORDINATES: protein motif:HMM:NF015700.2
AfsA-related hotdog domain-containing protein
COORDINATES: protein motif:HMM:NF012927.2
COORDINATES: protein motif:HMM:NF024950.2
COORDINATES: protein motif:HMM:NF013530.2
COORDINATES: protein motif:HMM:NF013786.2
GO:0008897 - holo-[acyl-carrier-protein] synthase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
4'-phosphopantetheinyl transferase superfamily protein
COORDINATES: similar to AA sequence:RefSeq:WP_012337221.1
bifunctional diguanylate cyclase/phosphodiesterase
COORDINATES: similar to AA sequence:RefSeq:WP_011804258.1
COORDINATES: similar to AA sequence:RefSeq:WP_016832108.1
COORDINATES: similar to AA sequence:RefSeq:WP_016832107.1
COORDINATES: similar to AA sequence:RefSeq:WP_014899260.1
COORDINATES: similar to AA sequence:RefSeq:WP_019447487.1
COORDINATES: similar to AA sequence:RefSeq:WP_017878376.1
COORDINATES: similar to AA sequence:RefSeq:WP_004266745.1
COORDINATES: similar to AA sequence:RefSeq:WP_014725594.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349500.1
HAMP domain-containing sensor histidine kinase
COORDINATES: similar to AA sequence:RefSeq:WP_011545752.1
COORDINATES: protein motif:HMM:NF014664.2
carboxymuconolactone decarboxylase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012337237.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545750.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498528.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349542.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349543.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349544.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349545.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349546.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349547.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349548.1
COORDINATES: similar to AA sequence:RefSeq:WP_010121768.1
COORDINATES: similar to AA sequence:RefSeq:WP_010094362.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349551.1
GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011349552.1
COORDINATES: similar to AA sequence:RefSeq:WP_017331008.1
3-dehydroquinate synthase II family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011349554.1
GO:0008171 - O-methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011349555.1
FadR/GntR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011349556.1
COORDINATES: similar to AA sequence:RefSeq:WP_009904408.1
COORDINATES: similar to AA sequence:RefSeq:WP_015003297.1
electron transfer flavoprotein-ubiquinone oxidoreductase
COORDINATES: similar to AA sequence:RefSeq:WP_012337245.1
acetyl-CoA C-acyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012337246.1
GO:0006631 - fatty acid metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006481440.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498522.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489736.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349574.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489731.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481435.1
COORDINATES: similar to AA sequence:RefSeq:WP_017335554.1
GO:0004139 - deoxyribose-phosphate aldolase activity [Evidence IEA]
GO:0009264 - deoxyribonucleotide catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_017335555.1
DNA-binding transcriptional repressor DeoR
COORDINATES: similar to AA sequence:RefSeq:WP_011545735.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489743.1
GO:0005886 - plasma membrane [Evidence IEA]
GO:0015535 - fucose:proton symporter activity [Evidence IEA]
GO:0015756 - fucose transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006767512.1
GO:0004747 - ribokinase activity [Evidence IEA]
GO:0019303 - D-ribose catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013690701.1
phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006481351.1
PhzF family phenazine biosynthesis protein
COORDINATES: similar to AA sequence:RefSeq:WP_011545654.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545653.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545652.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349606.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349607.1
COORDINATES: similar to AA sequence:RefSeq:WP_014725609.1
COORDINATES: similar to AA sequence:RefSeq:WP_011879796.1
COORDINATES: similar to AA sequence:RefSeq:WP_011879797.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481344.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337499.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498446.1
gamma-glutamylcyclotransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_017329140.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660619.1
COORDINATES: similar to AA sequence:RefSeq:WP_006762436.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481339.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660616.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337505.1
3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
COORDINATES: similar to AA sequence:RefSeq:WP_011349621.1
COORDINATES: similar to AA sequence:RefSeq:WP_012372760.1
COORDINATES: protein motif:HMM:NF024808.2
COORDINATES: similar to AA sequence:RefSeq:WP_011349624.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349625.1
COORDINATES: similar to AA sequence:RefSeq:WP_018926188.1
GO:0008869 - galactonate dehydratase activity [Evidence IEA]
GO:0009063 - amino acid catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011349628.1
GO:0140359 - ABC-type transporter activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
COORDINATES: protein motif:HMM:NF020039.2
SMP-30/gluconolactonase/LRE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011349630.1
LacI family DNA-binding transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011349631.1
COORDINATES: similar to AA sequence:RefSeq:WP_013696603.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545640.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337508.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660610.1
COORDINATES: similar to AA sequence:RefSeq:WP_006407352.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481332.1
COORDINATES: similar to AA sequence:RefSeq:WP_006753109.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545635.1
COORDINATES: similar to AA sequence:RefSeq:WP_006761812.1
COORDINATES: similar to AA sequence:RefSeq:WP_017331357.1
COORDINATES: similar to AA sequence:RefSeq:WP_006753105.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349644.1
COORDINATES: similar to AA sequence:RefSeq:WP_006484534.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337044.1
COORDINATES: similar to AA sequence:RefSeq:WP_013342844.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337046.1
COORDINATES: similar to AA sequence:RefSeq:WP_006050090.1
COORDINATES: similar to AA sequence:RefSeq:WP_006753231.1
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: similar to AA sequence:RefSeq:WP_011349645.1
COORDINATES: similar to AA sequence:RefSeq:WP_008346356.1
COORDINATES: similar to AA sequence:RefSeq:WP_008346354.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349648.1
2-hydroxycarboxylate transporter family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012337513.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337514.1
GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA]
TetR/AcrR family transcriptional regulator C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_006498429.1
COORDINATES: similar to AA sequence:RefSeq:WP_006398845.1
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_006498427.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011545625.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349657.1
GO:0009326 - formate dehydrogenase complex [Evidence IEA]
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]
GO:0009061 - anaerobic respiration [Evidence IEA]; GO:0015942 - formate metabolic process [Evidence IEA]
formate dehydrogenase accessory sulfurtransferase FdhD
COORDINATES: similar to AA sequence:RefSeq:WP_006498424.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349659.1
GO:0016682 - oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor [Evidence IEA]
cytochrome d ubiquinol oxidase subunit II
COORDINATES: similar to AA sequence:RefSeq:WP_011349660.1
COORDINATES: similar to AA sequence:RefSeq:WP_006753125.1
COORDINATES: protein motif:HMM:NF024966.2
COORDINATES: similar to AA sequence:RefSeq:WP_006046739.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046740.1
COORDINATES: similar to AA sequence:RefSeq:WP_018437200.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337523.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660578.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006481299.1
COORDINATES: similar to AA sequence:RefSeq:WP_007176207.1
GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012400214.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217841.1
COORDINATES: similar to AA sequence:RefSeq:WP_006761446.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767485.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349684.1
GO:0008777 - acetylornithine deacetylase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012372721.1
COORDINATES: similar to AA sequence:RefSeq:WP_006407378.1
COORDINATES: similar to AA sequence:RefSeq:WP_004542722.1
COORDINATES: similar to AA sequence:RefSeq:WP_004536487.1
peptidase domain-containing ABC transporter
COORDINATES: similar to AA sequence:RefSeq:WP_015602012.1
HlyD family efflux transporter periplasmic adaptor subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012372719.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337539.1
COORDINATES: similar to AA sequence:RefSeq:WP_006755575.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337541.1
GO:0140737 - encapsulin nanocompartment [Evidence IEA]
family 1 encapsulin nanocompartment shell protein
COORDINATES: similar to AA sequence:RefSeq:WP_006498397.1
GO:0020037 - heme binding [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011349692.1
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: similar to AA sequence:RefSeq:WP_018312499.1
COORDINATES: similar to AA sequence:RefSeq:WP_011301864.1
COORDINATES: similar to AA sequence:RefSeq:WP_006487025.1
COORDINATES: similar to AA sequence:RefSeq:WP_006487023.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349567.1
COORDINATES: similar to AA sequence:RefSeq:WP_006407388.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498394.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336573.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336575.1
GO:0008863 - formate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0051287 - NAD binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006481290.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481289.1
COORDINATES: similar to AA sequence:RefSeq:WP_006481288.1
COORDINATES: similar to AA sequence:RefSeq:WP_006498386.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545597.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660547.1
sigma-54 dependent transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_006498364.1
COORDINATES: similar to AA sequence:RefSeq:WP_012217887.1
GO:0016987 - sigma factor activity [Evidence IEA]
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_009978806.1
COORDINATES: similar to AA sequence:RefSeq:WP_010120894.1
COORDINATES: similar to AA sequence:RefSeq:WP_006761661.1
COORDINATES: similar to AA sequence:RefSeq:WP_006761779.1
COORDINATES: similar to AA sequence:RefSeq:WP_009688930.1
GO:0009636 - response to toxic substance [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018422477.1
COORDINATES: similar to AA sequence:RefSeq:WP_016347211.1
COORDINATES: similar to AA sequence:RefSeq:WP_019717610.1
COORDINATES: similar to AA sequence:RefSeq:WP_006758807.1
COORDINATES: similar to AA sequence:RefSeq:WP_011545521.1
COORDINATES: similar to AA sequence:RefSeq:WP_011349729.1
COORDINATES: similar to AA sequence:RefSeq:WP_017424324.1
COORDINATES: similar to AA sequence:RefSeq:WP_006413726.1
GO:0018850 - chloromuconate cycloisomerase activity [Evidence IEA]; GO:0018849 - muconate cycloisomerase activity [Evidence IEA]
muconate/chloromuconate family cycloisomerase
COORDINATES: similar to AA sequence:RefSeq:WP_006407851.1
GO:0018576 - catechol 1,2-dioxygenase activity [Evidence IEA]
GO:0019615 - catechol catabolic process, ortho-cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011661450.1
COORDINATES: similar to AA sequence:RefSeq:WP_011695017.1
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006485361.1
benzoate 1,2-dioxygenase electron transfer component BenC
COORDINATES: similar to AA sequence:RefSeq:WP_012336679.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336680.1
COORDINATES: similar to AA sequence:RefSeq:WP_006767149.1
COORDINATES: similar to AA sequence:RefSeq:WP_006405151.1
COORDINATES: similar to AA sequence:RefSeq:WP_006490675.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493748.1
DeoR/GlpR family DNA-binding transcription regulator
COORDINATES: similar to AA sequence:RefSeq:WP_012493747.1
BadF/BadG/BcrA/BcrD ATPase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_006483265.1
GO:0097367 - carbohydrate derivative binding [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012493746.1
GO:0005975 - carbohydrate metabolic process [Evidence IEA]
D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012493745.1
COORDINATES: similar to AA sequence:RefSeq:WP_012493744.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489177.1
COORDINATES: similar to AA sequence:RefSeq:WP_012337432.1
COORDINATES: similar to AA sequence:RefSeq:WP_012336703.1
COORDINATES: similar to AA sequence:RefSeq:WP_006761327.1
COORDINATES: similar to AA sequence:RefSeq:WP_009893416.1
zinc ribbon domain-containing protein YjdM
COORDINATES: similar to AA sequence:RefSeq:WP_006498246.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489181.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661419.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489163.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489184.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489183.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489175.1
COORDINATES: similar to AA sequence:RefSeq:WP_006489158.1
COORDINATES: similar to AA sequence:RefSeq:WP_011880019.1
COORDINATES: similar to AA sequence:RefSeq:WP_011660128.1
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: similar to AA sequence:RefSeq:WP_011875589.1
COORDINATES: similar to AA sequence:RefSeq:WP_009693043.1
Tn3 family transposase post-transcriptional regulator TnpC
COORDINATES: similar to AA sequence:RefSeq:WP_012464980.1
COORDINATES: similar to AA sequence:RefSeq:WP_011875591.1
COORDINATES: similar to AA sequence:RefSeq:WP_012218072.1
COORDINATES: similar to AA sequence:RefSeq:WP_012338825.1
COORDINATES: similar to AA sequence:RefSeq:WP_007584674.1
COORDINATES: similar to AA sequence:RefSeq:WP_011875595.1
GO:0047134 - protein-disulfide reductase (NAD(P)) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012211072.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211071.1
COORDINATES: similar to AA sequence:RefSeq:WP_012464982.1
COORDINATES: similar to AA sequence:RefSeq:WP_086558222.1
IS3-like element ISButh1 family transposase
COORDINATES: similar to AA sequence:RefSeq:WP_012211070.1
COORDINATES: similar to AA sequence:RefSeq:WP_009687817.1
COORDINATES: similar to AA sequence:RefSeq:WP_011875649.1
GO:0006878 - cellular copper ion homeostasis [Evidence IEA]; GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
Cu(I)-responsive transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_014429882.1
heavy-metal-associated domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012202380.1
COORDINATES: similar to AA sequence:RefSeq:WP_019254488.1
GO:0005507 - copper ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
multicopper oxidase domain-containing protein
COORDINATES: protein motif:HMM:NF025045.2
COORDINATES: similar to AA sequence:RefSeq:WP_009688003.1
COORDINATES: similar to AA sequence:RefSeq:WP_007589565.1
GO:0005507 - copper ion binding [Evidence IEA]
GO:0006825 - copper ion transport [Evidence IEA]
copper homeostasis periplasmic binding protein CopC
COORDINATES: similar to AA sequence:RefSeq:WP_020067670.1
COORDINATES: similar to AA sequence:RefSeq:WP_006046700.1
COORDINATES: similar to AA sequence:RefSeq:WP_010122633.1
COORDINATES: similar to AA sequence:RefSeq:WP_009693501.1
COORDINATES: protein motif:HMM:NF024606.2
TerB N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013691861.1
COORDINATES: similar to AA sequence:RefSeq:WP_018309630.1
COORDINATES: similar to AA sequence:RefSeq:WP_018309631.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_010107351.1
SET domain-containing protein-lysine N-methyltransferase
COORDINATES: protein motif:HMM:NF025085.2
COORDINATES: similar to AA sequence:RefSeq:WP_008917520.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630581.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_006764425.1
COORDINATES: similar to AA sequence:RefSeq:WP_012218080.1
COORDINATES: similar to AA sequence:RefSeq:WP_013236540.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630616.1
COORDINATES: similar to AA sequence:RefSeq:WP_006029185.1
COORDINATES: similar to AA sequence:RefSeq:WP_009461162.1
COORDINATES: similar to AA sequence:RefSeq:WP_015004438.1
GSU2403 family nucleotidyltransferase fold protein
COORDINATES: similar to AA sequence:RefSeq:WP_011546856.1
COORDINATES: protein motif:HMM:NF020387.2
COORDINATES: similar to AA sequence:RefSeq:WP_006482547.1
COORDINATES: similar to AA sequence:RefSeq:WP_000624647.1
TnpB, as the term is used for proteins encoded by IS66 family insertion elements, is considered an accessory protein, since TnpC, encoded by a neighboring gene, is a DDE family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
IS66 family insertion sequence element accessory protein TnpB
COORDINATES: protein motif:HMM:NF013677.2
COORDINATES: similar to AA sequence:RefSeq:WP_011876237.1
COORDINATES: similar to AA sequence:RefSeq:WP_013700064.1
COORDINATES: protein motif:HMM:NF040044.1
COORDINATES: similar to AA sequence:RefSeq:WP_018439185.1
COORDINATES: similar to AA sequence:RefSeq:WP_011876255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013696272.1
GO:0045893 - positive regulation of DNA-templated transcription [Evidence IEA]; GO:1902208 - regulation of bacterial-type flagellum assembly [Evidence IEA]
flagellar transcriptional regulator FlhC
COORDINATES: similar to AA sequence:RefSeq:WP_004198199.1
flagellar transcriptional regulator FlhD
COORDINATES: similar to AA sequence:RefSeq:WP_010089545.1
COORDINATES: similar to AA sequence:RefSeq:WP_017329329.1
COORDINATES: protein motif:HMM:NF018381.2
COORDINATES: protein motif:HMM:NF024244.2
COORDINATES: similar to AA sequence:RefSeq:WP_010100514.1
COORDINATES: similar to AA sequence:RefSeq:WP_007582821.1
COORDINATES: similar to AA sequence:RefSeq:WP_012430931.1
COORDINATES: protein motif:HMM:NF024949.2
COORDINATES: protein motif:HMM:NF016785.2
shufflon system plasmid conjugative transfer pilus tip adhesin PilV
COORDINATES: protein motif:HMM:NF019064.2
COORDINATES: protein motif:HMM:NF012652.2
COORDINATES: protein motif:HMM:NF020384.2
COORDINATES: protein motif:HMM:NF012694.2
COORDINATES: protein motif:HMM:NF018562.2
COORDINATES: protein motif:HMM:TIGR03021.1
GO:0009297 - pilus assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF012485.2
COORDINATES: protein motif:HMM:NF015688.2
COORDINATES: protein motif:HMM:NF015487.2
TrbG/VirB9 family P-type conjugative transfer protein
COORDINATES: protein motif:HMM:NF016238.2
COORDINATES: protein motif:HMM:NF016491.2
GO:0030255 - protein secretion by the type IV secretion system [Evidence IEA]
COORDINATES: protein motif:HMM:NF015118.2
VirB4 family type IV secretion system protein
COORDINATES: protein motif:HMM:NF025706.2
COORDINATES: protein motif:HMM:TIGR03743.1
GO:0003674 - molecular_function [Evidence IEA]
Members of this protein family are the putative conjugative coupling factor, TraD, as the term is used for the SXT and TOL plasmid systems; Derived by automated computational analysis using gene prediction method: Protein Homology.
conjugative transfer system coupling protein TraD
COORDINATES: protein motif:HMM:NF019153.2
COORDINATES: protein motif:HMM:NF013235.2
COORDINATES: protein motif:HMM:NF018691.2
COORDINATES: protein motif:HMM:TIGR00180.1
COORDINATES: protein motif:HMM:NF013702.2
GO:0016746 - acyltransferase activity [Evidence IEA]
1-acyl-sn-glycerol-3-phosphate acyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_006409555.1
COORDINATES: similar to AA sequence:RefSeq:WP_004630680.1
COORDINATES: similar to AA sequence:RefSeq:WP_006763782.1
COORDINATES: similar to AA sequence:RefSeq:WP_013691811.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211067.1
COORDINATES: similar to AA sequence:RefSeq:WP_012211068.1
COORDINATES: similar to AA sequence:RefSeq:WP_006493623.1
GO:0051782 - negative regulation of cell division [Evidence IEA]; GO:0009432 - SOS response [Evidence IEA]
translesion DNA synthesis-associated protein ImuA
COORDINATES: similar to AA sequence:RefSeq:WP_011695131.1
GO:0003697 - single-stranded DNA binding [Evidence IEA]
GO:0006974 - cellular response to DNA damage stimulus [Evidence IEA]; GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA]
SOS response-associated peptidase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012464975.1
COORDINATES: protein motif:HMM:NF039218.1
COORDINATES: similar to AA sequence:RefSeq:WP_017423134.1
COORDINATES: similar to AA sequence:RefSeq:WP_011661389.1
COORDINATES: similar to AA sequence:RefSeq:WP_006497601.1
GO:0033103 - protein secretion by the type VI secretion system [Evidence IEA]
type VI secretion system baseplate subunit TssF
COORDINATES: similar to AA sequence:RefSeq:WP_006750559.1
type VI secretion system tip protein VgrG
COORDINATES: protein motif:HMM:NF021456.2
COORDINATES: protein motif:HMM:NF026942.2
polymorphic toxin type 15 domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011661387.1
COORDINATES: protein motif:HMM:NF019544.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF012497.2
COORDINATES: protein motif:HMM:NF024744.2
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: protein motif:HMM:NF025024.2
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: similar to AA sequence:RefSeq:WP_006762299.1
COORDINATES: protein motif:HMM:NF012798.2
COORDINATES: protein motif:HMM:NF022224.2
COORDINATES: similar to AA sequence:RefSeq:WP_020654092.1
COORDINATES: similar to AA sequence:RefSeq:WP_017450034.1
COORDINATES: similar to AA sequence:RefSeq:WP_008642090.1