Callithrix jacchus isolate mCalJac1 chromosome 21, mCalJa1.2.pat.X, whole genome shotgun sequence.
type: Entry
definition: Callithrix jacchus isolate mCalJac1 chromosome 21, mCalJa1.2.pat.X, whole genome shotgun sequence.
sequence version: NC_071462.1
sequence date: 2023-03-18
sequence: sequence
division: CON
label: NC_071462.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA939228
dblink: SAMN12368443
keyword: WGS
keyword: RefSeq
source: Callithrix jacchus (white-tufted-ear marmoset)
organism: Callithrix jacchus
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM021935.1.\nAssembly name: mCalJa1.2.pat.X\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/04/28. The original whole-genome shotgun project has the\naccession JAALXP000000000.2.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 25-APR-2021\nAssembly Method :: TrioCanu v. 1.8; purge_dups v. 1.0.0;\n Scaff 10x v. 4.1.0; Bionano solve solve\n v. 3.2.1_04122018; Salsa2 HiC v. 2.2;\n Arrow polishing and gap filling v.\n smrtlink_6.0.0.47841; Longranger Align v.\n 2.2.2; Freebayes v. 1.3.1; gEVAL manual\n curation v. 2019-12-11; Zhang manual\n curation v. 2021-04-25; VGP assembly\n pipeline v. 1.6\nAssembly Name :: mCalJa1.2.pat.X\nDiploid :: Principal pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 63.44x\nSequencing Technology :: PacBio Sequel I CLR; Illumina NovaSeq;\n Arima Genomics Hi-C; Bionano Genomics DLS\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Status :: Full annotation\nAnnotation Name :: GCF_011100555.1-RS_2023_03\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 10.1\nAnnotation Method :: Best-placed RefSeq; Gnomon;\n cmsearch; tRNAscan-SE\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\nAnnotation Date :: 03/02/2023\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 50614742
topology: linear
so has quality: SO_0000987
location: 1..50614742
location: region:1-50614742:1
RO_0002162: 9483

NC_071462
type: RefSeq
SIO_000068: refseq

PRJNA939228
type: BioProject
SIO_000068: bioproject

SAMN12368443
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:50614742:1
position: 50614742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-50614742:1:source
so part of: sequence
organism: Callithrix jacchus
mol type: genomic DNA
isolate: mCalJac1
chromosome: 21
sex: male
tissue type: muscle
dev stage: juvenile
country: USA: New York
lat lon: 40.762676 N 73.955541 W
collection date: 2018-06-12
collected by: Stephanie Marcus and Margaret Fabiszak

9483
type: Taxonomy
SIO_000068: taxonomy

LOC128930343
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930343
note: uncharacterized LOC128930343; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(239987..249510)
location: region:239987-249510:-1
so has part: feature:239987-249510:-1:exon
subclass of: SO_0000011

128930343
type: Gene
SIO_000068: ncbigene

position:239987:-1
position: 239987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:249510:-1
position: 249510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:239987-249510:-1:exon

LOC128930343
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC128930343
product: uncharacterized LOC128930343, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008478304.1
SIO_010081: LOC128930343
subclass of: SO_0000673
so part of: LOC128930343
location: complement(join(239987..240395,244967..245098,249019..249510))
location: region:239987-249510:-1
so has part: feature:249019-249510:-1:exon
so has part: feature:244967-245098:-1:exon
so has part: feature:239987-240395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249019-249510:-1:exon

position:249019:-1
position: 249019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:244967-245098:-1:exon

position:244967:-1
position: 244967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:245098:-1
position: 245098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:239987-240395:-1:exon

position:240395:-1
position: 240395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128930343
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC128930343
product: uncharacterized LOC128930343, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008478303.1
SIO_010081: LOC128930343
subclass of: SO_0000673
so part of: LOC128930343
location: complement(join(239987..240395,244967..245098,248550..248608,249019..249510))
location: region:239987-249510:-1
so has part: feature:249019-249510:-1:exon
so has part: feature:248550-248608:-1:exon
so has part: feature:244967-245098:-1:exon
so has part: feature:239987-240395:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:249019-249510:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:248550-248608:-1:exon

position:248550:-1
position: 248550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:248608:-1
position: 248608
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:244967-245098:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:239987-240395:-1:exon

LOC128930343
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC128930343
product: uncharacterized LOC128930343, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008478305.1
SIO_010081: LOC128930343
subclass of: SO_0000673
so part of: LOC128930343
location: complement(join(239987..240395,244967..245098,246852..246976))
location: region:239987-246976:-1
so has part: feature:246852-246976:-1:exon
so has part: feature:244967-245098:-1:exon
so has part: feature:239987-240395:-1:exon

position:246976:-1
position: 246976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:246852-246976:-1:exon

position:246852:-1
position: 246852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:244967-245098:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:239987-240395:-1:exon

LOC118150046
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150046
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(324258..324421)
location: region:324258-324421:-1
so has part: feature:324258-324421:-1:exon
subclass of: SO_0000623

118150046
type: Gene
SIO_000068: ncbigene

position:324258:-1
position: 324258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324421:-1
position: 324421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324258-324421:-1:exon

LOC118150046
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150046
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737807.1
SIO_010081: LOC118150046
subclass of: SO_0000673
so part of: LOC118150046
location: complement(324258..324421)
location: region:324258-324421:-1
so has part: feature:324258-324421:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324258-324421:-1:exon

LOC100412570
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100412570
note: coatomer subunit gamma-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 327101..330263
location: region:327101-330263:1
so has part: feature:327101-330263:1:exon

100412570
type: Gene
SIO_000068: ncbigene

position:327101:1
position: 327101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:330263:1
position: 330263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:327101-330263:1:exon

LOC100412570
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9483
gene: LOC100412570
product: coatomer subunit gamma-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 313 ESTs, 1 Protein
pseudo: true
transcript id: XR_004737751.2
SIO_010081: LOC100412570
so part of: LOC100412570
location: 327101..330263
location: region:327101-330263:1
so has part: feature:327101-330263:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:327101-330263:1:exon

LOC118150057
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150057
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(337147..337310)
location: region:337147-337310:-1
so has part: feature:337147-337310:-1:exon
subclass of: SO_0000623

118150057
type: Gene
SIO_000068: ncbigene

position:337147:-1
position: 337147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337310:-1
position: 337310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:337147-337310:-1:exon

LOC118150057
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150057
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737818.1
SIO_010081: LOC118150057
subclass of: SO_0000673
so part of: LOC118150057
location: complement(337147..337310)
location: region:337147-337310:-1
so has part: feature:337147-337310:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:337147-337310:-1:exon

LOC118149990
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149990
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 353578..353741
location: region:353578-353741:1
so has part: feature:353578-353741:1:exon
subclass of: SO_0000623

118149990
type: Gene
SIO_000068: ncbigene

position:353578:1
position: 353578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:353741:1
position: 353741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:353578-353741:1:exon

LOC118149990
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118149990
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737760.1
SIO_010081: LOC118149990
subclass of: SO_0000673
so part of: LOC118149990
location: 353578..353741
location: region:353578-353741:1
so has part: feature:353578-353741:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:353578-353741:1:exon

LOC118149972
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149972
note: coatomer subunit gamma-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(360158..366288)
location: region:360158-366288:-1
so has part: feature:360158-366288:-1:exon

118149972
type: Gene
SIO_000068: ncbigene

position:360158:-1
position: 360158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:366288:-1
position: 366288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:360158-366288:-1:exon

LOC118149972
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9483
gene: LOC118149972
product: coatomer subunit gamma-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 ESTs, 3 Proteins
pseudo: true
transcript id: XR_004737752.2
SIO_010081: LOC118149972
so part of: LOC118149972
location: complement(join(360158..363735,366102..366288))
location: region:360158-366288:-1
so has part: feature:366102-366288:-1:exon
so has part: feature:360158-363735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366102-366288:-1:exon

position:366102:-1
position: 366102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:360158-363735:-1:exon

position:363735:-1
position: 363735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118150001
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150001
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 366485..366648
location: region:366485-366648:1
so has part: feature:366485-366648:1:exon
subclass of: SO_0000623

118150001
type: Gene
SIO_000068: ncbigene

position:366485:1
position: 366485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:366648:1
position: 366648
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:366485-366648:1:exon

LOC118150001
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150001
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737770.1
SIO_010081: LOC118150001
subclass of: SO_0000673
so part of: LOC118150001
location: 366485..366648
location: region:366485-366648:1
so has part: feature:366485-366648:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:366485-366648:1:exon

LOC118150024
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150024
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(380476..380639)
location: region:380476-380639:-1
so has part: feature:380476-380639:-1:exon
subclass of: SO_0000623

118150024
type: Gene
SIO_000068: ncbigene

position:380476:-1
position: 380476
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:380639:-1
position: 380639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:380476-380639:-1:exon

LOC118150024
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150024
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737792.1
SIO_010081: LOC118150024
subclass of: SO_0000673
so part of: LOC118150024
location: complement(380476..380639)
location: region:380476-380639:-1
so has part: feature:380476-380639:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:380476-380639:-1:exon

LOC108589401
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC108589401
note: uncharacterized LOC108589401; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(431513..432605)
location: region:431513-432605:-1
so has part: feature:431513-432605:-1:exon
subclass of: SO_0000011

108589401
type: Gene
SIO_000068: ncbigene

position:431513:-1
position: 431513
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:432605:-1
position: 432605
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:431513-432605:-1:exon

LOC108589401
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC108589401
product: uncharacterized LOC108589401
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001908624.3
SIO_010081: LOC108589401
subclass of: SO_0000673
so part of: LOC108589401
location: complement(join(431513..431765,431974..432605))
location: region:431513-432605:-1
so has part: feature:431974-432605:-1:exon
so has part: feature:431513-431765:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:431974-432605:-1:exon

position:431974:-1
position: 431974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:431513-431765:-1:exon

position:431765:-1
position: 431765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GABRR3
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: GABRR3
note: gamma-aminobutyric acid type A receptor subunit rho3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 445276..506492
location: region:445276-506492:1
so has part: feature:445276-506492:1:exon
subclass of: SO_0000010

100408374
type: Gene
SIO_000068: ncbigene

position:445276:1
position: 445276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506492:1
position: 506492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445276-506492:1:exon

GABRR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: GABRR3
product: gamma-aminobutyric acid type A receptor subunit rho3, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 15 Proteins
transcript id: XM_002761293.4
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(445276..445725,454952..455064,464325..464392,476278..476501,480153..480235,481297..481437,487344..487496,495996..496192,502275..506492)
location: region:445276-506492:1
so has part: feature:445276-445725:1:exon
so has part: feature:454952-455064:1:exon
so has part: feature:464325-464392:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:487344-487496:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-506492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445276-445725:1:exon

position:445725:1
position: 445725
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:454952-455064:1:exon

position:454952:1
position: 454952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455064:1
position: 455064
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:464325-464392:1:exon

position:464325:1
position: 464325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:464392:1
position: 464392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:476278-476501:1:exon

position:476278:1
position: 476278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:476501:1
position: 476501
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:480153-480235:1:exon

position:480153:1
position: 480153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:480235:1
position: 480235
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:481297-481437:1:exon

position:481297:1
position: 481297
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:481437:1
position: 481437
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:487344-487496:1:exon

position:487344:1
position: 487344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:487496:1
position: 487496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:495996-496192:1:exon

position:495996:1
position: 495996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:496192:1
position: 496192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:502275-506492:1:exon

position:502275:1
position: 502275
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GABRR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: GABRR3
product: gamma-aminobutyric acid type A receptor subunit rho3, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 1 Protein
transcript id: XM_035282966.2
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(445276..445725,454952..455064,464325..464392,476278..476501,480153..480235,481297..481437,495996..496192,502275..506492)
location: region:445276-506492:1
so has part: feature:445276-445725:1:exon
so has part: feature:454952-455064:1:exon
so has part: feature:464325-464392:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-506492:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:445276-445725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454952-455064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464325-464392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476278-476501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480153-480235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481297-481437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495996-496192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502275-506492:1:exon

GABRR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: GABRR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit rho-3 isoform X1
translation: MPFIFQNTPKENIVITVLIAPTGILFVFFEEMVLAFQLVFFTYIWIALIPNACAASNIKMTHQRCSSSVKQTCKQETRMKKDDSTKVWPQKYEQLLHIEDNDFAMRPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFPSAVNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNILLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHISLSQFFIEEFSASSGLAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITAVGASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLTTAEERKQFKKTGKISRMYNIDAVQAMAFDGCFHDADIDMDQTSLSLNSEDFVRRKSICSPSTDSSRITRRKSLGGHVGRIILENNHVIDTYSRVLFPIVYILFNLFYWGVYV
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(445508..445725,454952..455064,464325..464392,476278..476501,480153..480235,481297..481437,487344..487496,495996..496192,502275..502574)
location: region:445508-502574:1
so has part: feature:445508-445725:1:exon
so has part: feature:454952-455064:1:exon
so has part: feature:464325-464392:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:487344-487496:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-502574:1:exon

XP_002761339.2
type: Protein
SIO_000068: ncbiprotein

position:445508:1
position: 445508
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502574:1
position: 502574
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:445508-445725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454952-455064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464325-464392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476278-476501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480153-480235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481297-481437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:487344-487496:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:495996-496192:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502275-502574:1:exon

GABRR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: GABRR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit rho-3 isoform X2
translation: MPFIFQNTPKENIVITVLIAPTGILFVFFEEMVLAFQLVFFTYIWIALIPNACAASNIKMTHQRCSSSVKQTCKQETRMKKDDSTKVWPQKYEQLLHIEDNDFAMRPGFGGSPVPVGIDVHVESIDSISETNMDFTMTFYLRHYWKDERLSFPSAVNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNILLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHISLSQFFIEEFSASSGLAFYSSTGITTVLTMSTIITAVGASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLTTAEERKQFKKTGKISRMYNIDAVQAMAFDGCFHDADIDMDQTSLSLNSEDFVRRKSICSPSTDSSRITRRKSLGGHVGRIILENNHVIDTYSRVLFPIVYILFNLFYWGVYV
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(445508..445725,454952..455064,464325..464392,476278..476501,480153..480235,481297..481437,495996..496192,502275..502574)
location: region:445508-502574:1
so has part: feature:445508-445725:1:exon
so has part: feature:454952-455064:1:exon
so has part: feature:464325-464392:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-502574:1:exon

XP_035138857.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:445508-445725:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:454952-455064:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:464325-464392:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:476278-476501:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:480153-480235:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:481297-481437:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495996-496192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502275-502574:1:exon

GABRR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: GABRR3
product: gamma-aminobutyric acid type A receptor subunit rho3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins
transcript id: XM_035282969.2
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(460955..461116,464325..464392,476278..476501,480153..480235,481297..481437,487344..487496,495996..496192,502275..506492)
location: region:460955-506492:1
so has part: feature:460955-461116:1:exon
so has part: feature:464325-464392:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:487344-487496:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-506492:1:exon

position:460955:1
position: 460955
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:460955-461116:1:exon

position:461116:1
position: 461116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:464325-464392:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:476278-476501:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:480153-480235:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:481297-481437:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:487344-487496:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:495996-496192:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502275-506492:1:exon

GABRR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: GABRR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit rho-3 isoform X4
translation: MDFTMTFYLRHYWKDERLSFPSAVNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNILLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHISLSQFFIEEFSASSGLAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITAVGASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLTTAEERKQFKKTGKISRMYNIDAVQAMAFDGCFHDADIDMDQTSLSLNSEDFVRRKSICSPSTDSSRITRRKSLGGHVGRIILENNHVIDTYSRVLFPIVYILFNLFYWGVYV
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(464390..464392,476278..476501,480153..480235,481297..481437,487344..487496,495996..496192,502275..502574)
location: region:464390-502574:1
so has part: feature:464390-464392:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:487344-487496:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-502574:1:exon

XP_035138860.1
type: Protein
SIO_000068: ncbiprotein

position:464390:1
position: 464390
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:464390-464392:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476278-476501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480153-480235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481297-481437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487344-487496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495996-496192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502275-502574:1:exon

GABRR3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: GABRR3
product: gamma-aminobutyric acid type A receptor subunit rho3, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 13 Proteins
transcript id: XM_035282967.2
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(470859..472506,476278..476501,480153..480235,481297..481437,487344..487496,495996..496192,502275..506492)
location: region:470859-506492:1
so has part: feature:470859-472506:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:487344-487496:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-506492:1:exon

position:470859:1
position: 470859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:470859-472506:1:exon

position:472506:1
position: 472506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476278-476501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480153-480235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481297-481437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487344-487496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495996-496192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502275-506492:1:exon

GABRR3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: GABRR3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-aminobutyric acid receptor subunit rho-3 isoform X3
translation: MRSDGLQVTVSPAHVLSLYLRLLVKVLASTLFSTVIVSFLRLPQPWRTDFTMTFYLRHYWKDERLSFPSAVNKSMTFDHRLIQKIWVPDIFFVHSKRSFIHDTTMENIMLRVHPDGNILLSLRITVSAMCFMDFSRFPLDTQNCSLELESYAYNEDDLMLYWKHGNKSLNTEEHISLSQFFIEEFSASSGLAFYSSTGWYNRLFINFVLRRHIFFFVLQTYFPAILMVMLSWVSFWIDRRAVPARVSLGITTVLTMSTIITAVGASMPQVSYLKAVDVYLWVSSLFVFLSVIEYAAVNYLTTAEERKQFKKTGKISRMYNIDAVQAMAFDGCFHDADIDMDQTSLSLNSEDFVRRKSICSPSTDSSRITRRKSLGGHVGRIILENNHVIDTYSRVLFPIVYILFNLFYWGVYV
SIO_010081: GABRR3
subclass of: SO_0000673
so part of: GABRR3
location: join(472363..472506,476278..476501,480153..480235,481297..481437,487344..487496,495996..496192,502275..502574)
location: region:472363-502574:1
so has part: feature:472363-472506:1:exon
so has part: feature:476278-476501:1:exon
so has part: feature:480153-480235:1:exon
so has part: feature:481297-481437:1:exon
so has part: feature:487344-487496:1:exon
so has part: feature:495996-496192:1:exon
so has part: feature:502275-502574:1:exon

XP_035138858.2
type: Protein
SIO_000068: ncbiprotein

position:472363:1
position: 472363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:472363-472506:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476278-476501:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:480153-480235:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:481297-481437:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:487344-487496:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:495996-496192:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:502275-502574:1:exon

RIOX2
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: RIOX2
note: ribosomal oxygenase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 515622..559195
location: region:515622-559195:1
so has part: feature:515622-559195:1:exon
subclass of: SO_0000010

100413649
type: Gene
SIO_000068: ncbigene

position:515622:1
position: 515622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559195:1
position: 559195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515622-559195:1:exon

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282903.2
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(515622..515724,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..546512)
location: region:515622-546512:1
so has part: feature:515622-515724:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-546512:1:exon

position:546512:1
position: 546512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515622-515724:1:exon

position:515724:1
position: 515724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

position:520683:1
position: 520683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:521153:1
position: 521153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:526339-526458:1:exon

position:526339:1
position: 526339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:526458:1
position: 526458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:528839-528967:1:exon

position:528839:1
position: 528839
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:528967:1
position: 528967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:532945-533048:1:exon

position:532945:1
position: 532945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:533048:1
position: 533048
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:536771-536873:1:exon

position:536771:1
position: 536771
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:536873:1
position: 536873
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:537604-537775:1:exon

position:537604:1
position: 537604
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:537775:1
position: 537775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540943-541031:1:exon

position:540943:1
position: 540943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:541031:1
position: 541031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:542489-542578:1:exon

position:542489:1
position: 542489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:542578:1
position: 542578
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:543032-546512:1:exon

position:543032:1
position: 543032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282907.2
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(515622..515724,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537607..537775,540943..541031,542489..542578,543032..546512)
location: region:515622-546512:1
so has part: feature:515622-515724:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537607-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-546512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515622-515724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537607-537775:1:exon

position:537607:1
position: 537607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543032-546512:1:exon

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282912.2
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(515622..515724,520683..521153,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543938)
location: region:515622-543938:1
so has part: feature:515622-515724:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543938:1:exon

position:543938:1
position: 543938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515622-515724:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543938:1:exon

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282906.2
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(516031..516167,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..546512)
location: region:516031-546512:1
so has part: feature:516031-516167:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-546512:1:exon

position:516031:1
position: 516031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516031-516167:1:exon

position:516167:1
position: 516167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543032-546512:1:exon

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282908.2
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(516031..516167,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537607..537775,540943..541031,542489..542578,543032..546512)
location: region:516031-546512:1
so has part: feature:516031-516167:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537607-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-546512:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516031-516167:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537607-537775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543032-546512:1:exon

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282905.2
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(516350..516486,518178..518444,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543938)
location: region:516350-543938:1
so has part: feature:516350-516486:1:exon
so has part: feature:518178-518444:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543938:1:exon

position:516350:1
position: 516350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516350-516486:1:exon

position:516486:1
position: 516486
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:518178-518444:1:exon

position:518178:1
position: 518178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:518444:1
position: 518444
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:543032-543938:1:exon

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 1 Protein
transcript id: XM_054249099.1
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(516355..516486,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543148,559163..559195)
location: region:516355-559195:1
so has part: feature:516355-516486:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543148:1:exon
so has part: feature:559163-559195:1:exon

position:516355:1
position: 516355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:516355-516486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543032-543148:1:exon

position:543148:1
position: 543148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:559163-559195:1:exon

position:559163:1
position: 559163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249098.1
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(516355..516486,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543938)
location: region:516355-543938:1
so has part: feature:516355-516486:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516355-516486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543032-543938:1:exon

RIOX2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: RIOX2
product: ribosomal oxygenase 2, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282911.2
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(516355..516486,520683..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543148,543676..543938)
location: region:516355-543938:1
so has part: feature:516355-516486:1:exon
so has part: feature:520683-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543148:1:exon
so has part: feature:543676-543938:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:516355-516486:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:520683-521153:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543032-543148:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:543676-543938:1:exon

position:543676:1
position: 543676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X3
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLQVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLILKQS
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543148,559163..559180)
location: region:520722-559180:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543148:1:exon
so has part: feature:559163-559180:1:exon

XP_054105074.1
type: Protein
SIO_000068: ncbiprotein

position:520722:1
position: 520722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:559180:1
position: 559180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:559163-559180:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X4
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLQVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLMRGT
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543148,543676..543690)
location: region:520722-543690:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543148:1:exon
so has part: feature:543676-543690:1:exon

XP_035138802.1
type: Protein
SIO_000068: ncbiprotein

position:543690:1
position: 543690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543148:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:543676-543690:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X1
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLQVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLVLSLWTECLIQVV
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543190)
location: region:520722-543190:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543190:1:exon

XP_035138794.1
type: Protein
SIO_000068: ncbiprotein

position:543190:1
position: 543190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543190:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X1
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLQVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLVLSLWTECLIQVV
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543190)
location: region:520722-543190:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543190:1:exon

XP_035138796.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543190:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X1
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLQVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLVLSLWTECLIQVV
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543190)
location: region:520722-543190:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543190:1:exon

XP_035138797.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543190:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X1
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLQVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLVLSLWTECLIQVV
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543190)
location: region:520722-543190:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543190:1:exon

XP_054105073.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543190:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X2
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLVLSLWTECLIQVV
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537607..537775,540943..541031,542489..542578,543032..543190)
location: region:520722-543190:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537607-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543190:1:exon

XP_035138798.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537607-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543190:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X2
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKDELWRIQEKLECYFGSLVGSNVYITPAGSQGLPPHYDDVEVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLVLSLWTECLIQVV
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,526339..526458,528839..528967,532945..533048,536771..536873,537607..537775,540943..541031,542489..542578,543032..543190)
location: region:520722-543190:1
so has part: feature:520722-521153:1:exon
so has part: feature:526339-526458:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537607-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543190:1:exon

XP_035138799.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:526339-526458:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:537607-537775:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:543032-543190:1:exon

RIOX2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: RIOX2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ribosomal oxygenase 2 isoform X5
translation: MPKKAKAAGSRKEEGPVPCKQMKVEAAGGPSALNFDSPSSLFESLISPIKTETFFKEFWEQKPLLIRRDDPALATYCGSLFKLTDLKSLCSQGLYYGRDVNVCRCVGGKKKVLNKDGKAHFLQLRKDFDQKRATIQFHQPQRFKVFILQLEGEKHWRLYHPTVPLAREYSVEAEERIGRPVHEFTLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDTISGLVFDTAEEDVELRAGIPRQLLLQVESTAVATRRLSGFLRMLADRLEGTKELLSSDMKKDFIMHRLPPYSAGGGAELSTPGGKLPRLDSVVRLQFKDHIVLTVLPDQDQSDEAQEKMVYIYHSLRNRRETHMMGNEEETESHGLRFPLSHLDALKQIWNSSAVSVKDLKLTADEEKENLVLSLWTECLIQVV
SIO_010081: RIOX2
subclass of: SO_0000673
so part of: RIOX2
location: join(520722..521153,528839..528967,532945..533048,536771..536873,537604..537775,540943..541031,542489..542578,543032..543190)
location: region:520722-543190:1
so has part: feature:520722-521153:1:exon
so has part: feature:528839-528967:1:exon
so has part: feature:532945-533048:1:exon
so has part: feature:536771-536873:1:exon
so has part: feature:537604-537775:1:exon
so has part: feature:540943-541031:1:exon
so has part: feature:542489-542578:1:exon
so has part: feature:543032-543190:1:exon

XP_035138803.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:520722-521153:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:528839-528967:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:532945-533048:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:536771-536873:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:537604-537775:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:540943-541031:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:542489-542578:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:543032-543190:1:exon

CRYBG3
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: CRYBG3
note: crystallin beta-gamma domain containing 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(543402..691390)
location: region:543402-691390:-1
so has part: feature:543402-691390:-1:exon
subclass of: SO_0000010

100414005
type: Gene
SIO_000068: ncbigene

position:543402:-1
position: 543402
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691390:-1
position: 691390
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:543402-691390:-1:exon

CRYBG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CRYBG3
product: crystallin beta-gamma domain containing 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_002761299.6
SIO_010081: CRYBG3
subclass of: SO_0000673
so part of: CRYBG3
location: complement(join(543402..545116,545892..546051,546978..547136,556885..557008,559914..560053,583716..583842,587137..587246,592793..592825,594060..594186,594310..594452,599290..599416,602604..602737,606372..606407,607307..607421,608984..609120,614415..614562,615542..615657,616202..616246,617596..623701,634802..635193,669010..669076,691053..691390))
location: region:543402-691390:-1
so has part: feature:691053-691390:-1:exon
so has part: feature:669010-669076:-1:exon
so has part: feature:634802-635193:-1:exon
so has part: feature:617596-623701:-1:exon
so has part: feature:616202-616246:-1:exon
so has part: feature:615542-615657:-1:exon
so has part: feature:614415-614562:-1:exon
so has part: feature:608984-609120:-1:exon
so has part: feature:607307-607421:-1:exon
so has part: feature:606372-606407:-1:exon
so has part: feature:602604-602737:-1:exon
so has part: feature:599290-599416:-1:exon
so has part: feature:594310-594452:-1:exon
so has part: feature:594060-594186:-1:exon
so has part: feature:592793-592825:-1:exon
so has part: feature:587137-587246:-1:exon
so has part: feature:583716-583842:-1:exon
so has part: feature:559914-560053:-1:exon
so has part: feature:556885-557008:-1:exon
so has part: feature:546978-547136:-1:exon
so has part: feature:545892-546051:-1:exon
so has part: feature:543402-545116:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:691053-691390:-1:exon

position:691053:-1
position: 691053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:669010-669076:-1:exon

position:669010:-1
position: 669010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:669076:-1
position: 669076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:634802-635193:-1:exon

position:634802:-1
position: 634802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:635193:-1
position: 635193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:617596-623701:-1:exon

position:617596:-1
position: 617596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:623701:-1
position: 623701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:616202-616246:-1:exon

position:616202:-1
position: 616202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616246:-1
position: 616246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:615542-615657:-1:exon

position:615542:-1
position: 615542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615657:-1
position: 615657
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:614415-614562:-1:exon

position:614415:-1
position: 614415
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614562:-1
position: 614562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:608984-609120:-1:exon

position:608984:-1
position: 608984
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609120:-1
position: 609120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:607307-607421:-1:exon

position:607307:-1
position: 607307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607421:-1
position: 607421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:606372-606407:-1:exon

position:606372:-1
position: 606372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:606407:-1
position: 606407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:602604-602737:-1:exon

position:602604:-1
position: 602604
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:602737:-1
position: 602737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:599290-599416:-1:exon

position:599290:-1
position: 599290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:599416:-1
position: 599416
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:594310-594452:-1:exon

position:594310:-1
position: 594310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594452:-1
position: 594452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:594060-594186:-1:exon

position:594060:-1
position: 594060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:594186:-1
position: 594186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:592793-592825:-1:exon

position:592793:-1
position: 592793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592825:-1
position: 592825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:587137-587246:-1:exon

position:587137:-1
position: 587137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:587246:-1
position: 587246
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:583716-583842:-1:exon

position:583716:-1
position: 583716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:583842:-1
position: 583842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:559914-560053:-1:exon

position:559914:-1
position: 559914
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560053:-1
position: 560053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:556885-557008:-1:exon

position:556885:-1
position: 556885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:557008:-1
position: 557008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:546978-547136:-1:exon

position:546978:-1
position: 546978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:547136:-1
position: 547136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:545892-546051:-1:exon

position:545892:-1
position: 545892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:546051:-1
position: 546051
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:543402-545116:-1:exon

position:545116:-1
position: 545116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CRYBG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CRYBG3
product: crystallin beta-gamma domain containing 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_017967157.3
SIO_010081: CRYBG3
subclass of: SO_0000673
so part of: CRYBG3
location: complement(join(543402..545116,545892..546051,546978..547136,556885..557008,559914..560053,583716..583842,587137..587246,592793..592825,594060..594186,594310..594452,599290..599416,602604..602737,606372..606407,607307..607421,608984..609120,614415..614562,615542..615657,616202..616246,617596..623701,634802..635193,691053..691184))
location: region:543402-691184:-1
so has part: feature:691053-691184:-1:exon
so has part: feature:634802-635193:-1:exon
so has part: feature:617596-623701:-1:exon
so has part: feature:616202-616246:-1:exon
so has part: feature:615542-615657:-1:exon
so has part: feature:614415-614562:-1:exon
so has part: feature:608984-609120:-1:exon
so has part: feature:607307-607421:-1:exon
so has part: feature:606372-606407:-1:exon
so has part: feature:602604-602737:-1:exon
so has part: feature:599290-599416:-1:exon
so has part: feature:594310-594452:-1:exon
so has part: feature:594060-594186:-1:exon
so has part: feature:592793-592825:-1:exon
so has part: feature:587137-587246:-1:exon
so has part: feature:583716-583842:-1:exon
so has part: feature:559914-560053:-1:exon
so has part: feature:556885-557008:-1:exon
so has part: feature:546978-547136:-1:exon
so has part: feature:545892-546051:-1:exon
so has part: feature:543402-545116:-1:exon

position:691184:-1
position: 691184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691053-691184:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:634802-635193:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:617596-623701:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:616202-616246:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:615542-615657:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:614415-614562:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:608984-609120:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:607307-607421:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:606372-606407:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:602604-602737:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:599290-599416:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594310-594452:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:594060-594186:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:592793-592825:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:587137-587246:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:583716-583842:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:559914-560053:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:556885-557008:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:546978-547136:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:545892-546051:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:543402-545116:-1:exon

CRYBG3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CRYBG3
product: crystallin beta-gamma domain containing 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282902.2
SIO_010081: CRYBG3
subclass of: SO_0000673
so part of: CRYBG3
location: complement(join(543402..545116,545892..546051,546978..547136,556885..557008,559914..560053,583716..583842,587137..587246,592793..592825,594060..594186,594310..594452,599290..599416,602604..602737,606372..606407,607307..607421,608984..609120,614415..614562,615542..615657,616202..616246,617596..623701,632644..632753))
location: region:543402-632753:-1
so has part: feature:632644-632753:-1:exon
so has part: feature:617596-623701:-1:exon
so has part: feature:616202-616246:-1:exon
so has part: feature:615542-615657:-1:exon
so has part: feature:614415-614562:-1:exon
so has part: feature:608984-609120:-1:exon
so has part: feature:607307-607421:-1:exon
so has part: feature:606372-606407:-1:exon
so has part: feature:602604-602737:-1:exon
so has part: feature:599290-599416:-1:exon
so has part: feature:594310-594452:-1:exon
so has part: feature:594060-594186:-1:exon
so has part: feature:592793-592825:-1:exon
so has part: feature:587137-587246:-1:exon
so has part: feature:583716-583842:-1:exon
so has part: feature:559914-560053:-1:exon
so has part: feature:556885-557008:-1:exon
so has part: feature:546978-547136:-1:exon
so has part: feature:545892-546051:-1:exon
so has part: feature:543402-545116:-1:exon

position:632753:-1
position: 632753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:632644-632753:-1:exon

position:632644:-1
position: 632644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:617596-623701:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:616202-616246:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:615542-615657:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:614415-614562:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:608984-609120:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:607307-607421:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:606372-606407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:602604-602737:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:599290-599416:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594310-594452:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:594060-594186:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:592793-592825:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:587137-587246:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:583716-583842:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:559914-560053:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:556885-557008:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:546978-547136:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545892-546051:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:543402-545116:-1:exon

CRYBG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CRYBG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very large A-kinase anchor protein isoform X1
translation: MSGGRRRGSAPWHSFSRLFAPRSPSRDKEEEEEDRPGASQPPAPGRPAASVENEPLSTSQKKENVLSSDAVKILQSEEKRNHTEKPVTFPVQEDPKIGESDRQPKESFFQFLGNLFNISGRSSLGEAKQSSFKDDHDKTEKNLQNPSDHHEEGIKRERDIFSGSLRSQTHPTEEQDSNSSELSDAFSLDTTQDSEQETTNLLKQIDGKPEKPSVTYATYRGPRHIRKYLTQQMGLATVNTLDRENESSDSSANTHVDPGREIEAGILPVLSSTSTDSSVNGNLLEGPFEDSDCSKTSLNTDSSLTNNPELQTVASSNNLLNKNVWRGTERNRSSPSLTSSSYDGESDSQHHLSCEPVSQTNRNLLCSALFTGINSSKVPCSPDFQRVTTTENTTKENSSVMSNRTLVQREELVEPQGPAISDFSCSKSDGSDTTEQESTNLPSPNNSIRHEDLPLPESKCSDKQTVGNSSKQAATALQRRAVTDTELVNEGKGLSAQDSHKNMAVREIRRETESASAGEPIASSHVKAPVDKIESLPKDTDQFFETEAKKLDFRSCDTIPYTRRNKKDLGSVNYISESAVAACLGNKNAPELKFELNRSHISETPLESQGPQQAKVSPDAKTSLSLDCKNLNFNISPPTFVSGDEILSKVDIPDLMNEGSPVPIETGNVNIVGISYQPSKCKEENVKNPVEDAGRKSPSPSFSLEYTSVIFESKDVLSNSEKCQVLPSSEASGPDLSGMELLSFDSGSSKDCSSILSQDPNRVELMSSNTKANTTITGKSDSLSLEAKTDNIAKIASKAEIDDQNNVLVESHSGRGKTVSLSKISLSQAESRDISQDKMSSFLLRIIHVPEKPILSELTSLEVKQDKSFQSISHNEIEEKCLDAGLKEKCQAELSPAASKYEDIAETEADALCSPPALLQSNISEILPPVHDEKVGRQMAQNCEASTCMIHQSLDICGTKKISGHSEMAELNLTNISPKFQETGSTKVNSPFLDSDTSLEKNVSASEDSSFLNVPSLLRSEKKSSSYRKKENIHFLNGGIDSLSSSSSYPEEVSIINSHKPQSNFNSIQVTKDLTHEGTPLTNLLCPNSAHLEFETPISIWAEVTPIQERSGIYTGKISPDFLTAAQYDNPTEAEIGAVAGPAAAVNSSDQHCSEASTEHLEARRRARDQLSGVKSDLLKKANTLIDEVFNSVREELIFKHTVSTCQELIAIEGIMNLDTLKEDNSEKNPSEVTLTEIQQTEGLEEQGVENKSEVEEKPCVSPTVGEKSLLVDPDSMNVSCLLEDKARELVNEIIYVAQEKLRNDAFEDTEDTRDSELQANTSQILNSGSVKPHDVVREFLVSEQPVNQSTQISENKVLSKFFSISDLASGTESIKGREIVLYQKSPFSGNIAGLSDSINLQESDTVLLAEDMSHEQLDDGVKTHLICSEDYDETMERGYVDDNETETEDGRSLVLNFKWPPLVNDDIHAPSTSKSSLSDSFVCISEKNLPGHSKSTPLATSEVGKIHKKDNEINMGKIELTPSMLETGKTNKKDAELNIVKYEAVPPMLEMGRTYKMDAELNVTKTEPKANVFKMGEVYQMDAERCIEKPEGSPVILGMEKAYKMKDTEGDVGKIVVIPIRPEVKNIHQKDAEGDIVKTEMTPVTIDMENIYQTHAEGDIDKTGAVSMSEVANVYQKDGEGISEKAEVITVTLAIESACQKDAEGDIAKAEVMPMGLEMPIALEVANTYPKNAKGITSNTERPVLETEATYAKTAEEVVKNTEMVPCVLKVKEAHKVTPVPLEMEKACKRDVKETIGATVSIPSVTEMEKTSPEDGGENTEKHKVLPTVVDIEKIHGTGLGLSITQVGAMPPAFESKTREYAEGSVGDTKEEPTEIEGLIAHGSRLASHFRGYESPTLSKDYEGYPAPPMPDFQPGDTIGRLDKRMSLTGIYDKRREPDYSGEKYNLAFVSQDEQENSSFTILYEEPLQEEDTYASTEARRTQPVLFPDTSLDSIPVLA…
SIO_010081: CRYBG3
subclass of: SO_0000673
so part of: CRYBG3
location: complement(join(545028..545116,545892..546051,546978..547136,556885..557008,559914..560053,583716..583842,587137..587246,592793..592825,594060..594186,594310..594452,599290..599416,602604..602737,606372..606407,607307..607421,608984..609120,614415..614562,615542..615657,616202..616246,617596..623701,634802..635193,669010..669076,691053..691201))
location: region:545028-691201:-1
so has part: feature:691053-691201:-1:exon
so has part: feature:669010-669076:-1:exon
so has part: feature:634802-635193:-1:exon
so has part: feature:617596-623701:-1:exon
so has part: feature:616202-616246:-1:exon
so has part: feature:615542-615657:-1:exon
so has part: feature:614415-614562:-1:exon
so has part: feature:608984-609120:-1:exon
so has part: feature:607307-607421:-1:exon
so has part: feature:606372-606407:-1:exon
so has part: feature:602604-602737:-1:exon
so has part: feature:599290-599416:-1:exon
so has part: feature:594310-594452:-1:exon
so has part: feature:594060-594186:-1:exon
so has part: feature:592793-592825:-1:exon
so has part: feature:587137-587246:-1:exon
so has part: feature:583716-583842:-1:exon
so has part: feature:559914-560053:-1:exon
so has part: feature:556885-557008:-1:exon
so has part: feature:546978-547136:-1:exon
so has part: feature:545892-546051:-1:exon
so has part: feature:545028-545116:-1:exon

XP_002761345.5
type: Protein
SIO_000068: ncbiprotein

position:545028:-1
position: 545028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:691201:-1
position: 691201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:691053-691201:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:669010-669076:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:634802-635193:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:617596-623701:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:616202-616246:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:615542-615657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:614415-614562:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:608984-609120:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:607307-607421:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:606372-606407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:602604-602737:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:599290-599416:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:594310-594452:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:594060-594186:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:592793-592825:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:587137-587246:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:583716-583842:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:559914-560053:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:556885-557008:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:546978-547136:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:545892-546051:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:545028-545116:-1:exon

CRYBG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CRYBG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very large A-kinase anchor protein isoform X2
translation: MGLATVNTLDRENESSDSSANTHVDPGREIEAGILPVLSSTSTDSSVNGNLLEGPFEDSDCSKTSLNTDSSLTNNPELQTVASSNNLLNKNVWRGTERNRSSPSLTSSSYDGESDSQHHLSCEPVSQTNRNLLCSALFTGINSSKVPCSPDFQRVTTTENTTKENSSVMSNRTLVQREELVEPQGPAISDFSCSKSDGSDTTEQESTNLPSPNNSIRHEDLPLPESKCSDKQTVGNSSKQAATALQRRAVTDTELVNEGKGLSAQDSHKNMAVREIRRETESASAGEPIASSHVKAPVDKIESLPKDTDQFFETEAKKLDFRSCDTIPYTRRNKKDLGSVNYISESAVAACLGNKNAPELKFELNRSHISETPLESQGPQQAKVSPDAKTSLSLDCKNLNFNISPPTFVSGDEILSKVDIPDLMNEGSPVPIETGNVNIVGISYQPSKCKEENVKNPVEDAGRKSPSPSFSLEYTSVIFESKDVLSNSEKCQVLPSSEASGPDLSGMELLSFDSGSSKDCSSILSQDPNRVELMSSNTKANTTITGKSDSLSLEAKTDNIAKIASKAEIDDQNNVLVESHSGRGKTVSLSKISLSQAESRDISQDKMSSFLLRIIHVPEKPILSELTSLEVKQDKSFQSISHNEIEEKCLDAGLKEKCQAELSPAASKYEDIAETEADALCSPPALLQSNISEILPPVHDEKVGRQMAQNCEASTCMIHQSLDICGTKKISGHSEMAELNLTNISPKFQETGSTKVNSPFLDSDTSLEKNVSASEDSSFLNVPSLLRSEKKSSSYRKKENIHFLNGGIDSLSSSSSYPEEVSIINSHKPQSNFNSIQVTKDLTHEGTPLTNLLCPNSAHLEFETPISIWAEVTPIQERSGIYTGKISPDFLTAAQYDNPTEAEIGAVAGPAAAVNSSDQHCSEASTEHLEARRRARDQLSGVKSDLLKKANTLIDEVFNSVREELIFKHTVSTCQELIAIEGIMNLDTLKEDNSEKNPSEVTLTEIQQTEGLEEQGVENKSEVEEKPCVSPTVGEKSLLVDPDSMNVSCLLEDKARELVNEIIYVAQEKLRNDAFEDTEDTRDSELQANTSQILNSGSVKPHDVVREFLVSEQPVNQSTQISENKVLSKFFSISDLASGTESIKGREIVLYQKSPFSGNIAGLSDSINLQESDTVLLAEDMSHEQLDDGVKTHLICSEDYDETMERGYVDDNETETEDGRSLVLNFKWPPLVNDDIHAPSTSKSSLSDSFVCISEKNLPGHSKSTPLATSEVGKIHKKDNEINMGKIELTPSMLETGKTNKKDAELNIVKYEAVPPMLEMGRTYKMDAELNVTKTEPKANVFKMGEVYQMDAERCIEKPEGSPVILGMEKAYKMKDTEGDVGKIVVIPIRPEVKNIHQKDAEGDIVKTEMTPVTIDMENIYQTHAEGDIDKTGAVSMSEVANVYQKDGEGISEKAEVITVTLAIESACQKDAEGDIAKAEVMPMGLEMPIALEVANTYPKNAKGITSNTERPVLETEATYAKTAEEVVKNTEMVPCVLKVKEAHKVTPVPLEMEKACKRDVKETIGATVSIPSVTEMEKTSPEDGGENTEKHKVLPTVVDIEKIHGTGLGLSITQVGAMPPAFESKTREYAEGSVGDTKEEPTEIEGLIAHGSRLASHFRGYESPTLSKDYEGYPAPPMPDFQPGDTIGRLDKRMSLTGIYDKRREPDYSGEKYNLAFVSQDEQENSSFTILYEEPLQEEDTYASTEARRTQPVLFPDTSLDSIPVLACERSESRTDLVHHFEKGTKLGETFDSDSSEMFLSVEAKRYKIYPLALSPIYEDDSSQEDILSSEVSPGHQGPRKSRESENQSSSVLSLLQSVSERLKMNFDEDDREGAEEEEEEEAAALDKGDLRAGRREHVTFRLPDPSITFFPDDQESIQISKNSYVMPNDPTTSSLQVGLWPEKTSFLQKSDLTSKLHSSLKSAYHQYLQTSSEKGARFGGIFQEPVSKHFRVQDNPGR…
SIO_010081: CRYBG3
subclass of: SO_0000673
so part of: CRYBG3
location: complement(join(545028..545116,545892..546051,546978..547136,556885..557008,559914..560053,583716..583842,587137..587246,592793..592825,594060..594186,594310..594452,599290..599416,602604..602737,606372..606407,607307..607421,608984..609120,614415..614562,615542..615657,616202..616246,617596..623613))
location: region:545028-623613:-1
so has part: feature:617596-623613:-1:exon
so has part: feature:616202-616246:-1:exon
so has part: feature:615542-615657:-1:exon
so has part: feature:614415-614562:-1:exon
so has part: feature:608984-609120:-1:exon
so has part: feature:607307-607421:-1:exon
so has part: feature:606372-606407:-1:exon
so has part: feature:602604-602737:-1:exon
so has part: feature:599290-599416:-1:exon
so has part: feature:594310-594452:-1:exon
so has part: feature:594060-594186:-1:exon
so has part: feature:592793-592825:-1:exon
so has part: feature:587137-587246:-1:exon
so has part: feature:583716-583842:-1:exon
so has part: feature:559914-560053:-1:exon
so has part: feature:556885-557008:-1:exon
so has part: feature:546978-547136:-1:exon
so has part: feature:545892-546051:-1:exon
so has part: feature:545028-545116:-1:exon

XP_017822646.3
type: Protein
SIO_000068: ncbiprotein

position:623613:-1
position: 623613
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:617596-623613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616202-616246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615542-615657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614415-614562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608984-609120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607307-607421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606372-606407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:602604-602737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599290-599416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594310-594452:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594060-594186:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592793-592825:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:587137-587246:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:583716-583842:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:559914-560053:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556885-557008:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:546978-547136:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:545892-546051:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545028-545116:-1:exon

CRYBG3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CRYBG3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: very large A-kinase anchor protein isoform X2
translation: MGLATVNTLDRENESSDSSANTHVDPGREIEAGILPVLSSTSTDSSVNGNLLEGPFEDSDCSKTSLNTDSSLTNNPELQTVASSNNLLNKNVWRGTERNRSSPSLTSSSYDGESDSQHHLSCEPVSQTNRNLLCSALFTGINSSKVPCSPDFQRVTTTENTTKENSSVMSNRTLVQREELVEPQGPAISDFSCSKSDGSDTTEQESTNLPSPNNSIRHEDLPLPESKCSDKQTVGNSSKQAATALQRRAVTDTELVNEGKGLSAQDSHKNMAVREIRRETESASAGEPIASSHVKAPVDKIESLPKDTDQFFETEAKKLDFRSCDTIPYTRRNKKDLGSVNYISESAVAACLGNKNAPELKFELNRSHISETPLESQGPQQAKVSPDAKTSLSLDCKNLNFNISPPTFVSGDEILSKVDIPDLMNEGSPVPIETGNVNIVGISYQPSKCKEENVKNPVEDAGRKSPSPSFSLEYTSVIFESKDVLSNSEKCQVLPSSEASGPDLSGMELLSFDSGSSKDCSSILSQDPNRVELMSSNTKANTTITGKSDSLSLEAKTDNIAKIASKAEIDDQNNVLVESHSGRGKTVSLSKISLSQAESRDISQDKMSSFLLRIIHVPEKPILSELTSLEVKQDKSFQSISHNEIEEKCLDAGLKEKCQAELSPAASKYEDIAETEADALCSPPALLQSNISEILPPVHDEKVGRQMAQNCEASTCMIHQSLDICGTKKISGHSEMAELNLTNISPKFQETGSTKVNSPFLDSDTSLEKNVSASEDSSFLNVPSLLRSEKKSSSYRKKENIHFLNGGIDSLSSSSSYPEEVSIINSHKPQSNFNSIQVTKDLTHEGTPLTNLLCPNSAHLEFETPISIWAEVTPIQERSGIYTGKISPDFLTAAQYDNPTEAEIGAVAGPAAAVNSSDQHCSEASTEHLEARRRARDQLSGVKSDLLKKANTLIDEVFNSVREELIFKHTVSTCQELIAIEGIMNLDTLKEDNSEKNPSEVTLTEIQQTEGLEEQGVENKSEVEEKPCVSPTVGEKSLLVDPDSMNVSCLLEDKARELVNEIIYVAQEKLRNDAFEDTEDTRDSELQANTSQILNSGSVKPHDVVREFLVSEQPVNQSTQISENKVLSKFFSISDLASGTESIKGREIVLYQKSPFSGNIAGLSDSINLQESDTVLLAEDMSHEQLDDGVKTHLICSEDYDETMERGYVDDNETETEDGRSLVLNFKWPPLVNDDIHAPSTSKSSLSDSFVCISEKNLPGHSKSTPLATSEVGKIHKKDNEINMGKIELTPSMLETGKTNKKDAELNIVKYEAVPPMLEMGRTYKMDAELNVTKTEPKANVFKMGEVYQMDAERCIEKPEGSPVILGMEKAYKMKDTEGDVGKIVVIPIRPEVKNIHQKDAEGDIVKTEMTPVTIDMENIYQTHAEGDIDKTGAVSMSEVANVYQKDGEGISEKAEVITVTLAIESACQKDAEGDIAKAEVMPMGLEMPIALEVANTYPKNAKGITSNTERPVLETEATYAKTAEEVVKNTEMVPCVLKVKEAHKVTPVPLEMEKACKRDVKETIGATVSIPSVTEMEKTSPEDGGENTEKHKVLPTVVDIEKIHGTGLGLSITQVGAMPPAFESKTREYAEGSVGDTKEEPTEIEGLIAHGSRLASHFRGYESPTLSKDYEGYPAPPMPDFQPGDTIGRLDKRMSLTGIYDKRREPDYSGEKYNLAFVSQDEQENSSFTILYEEPLQEEDTYASTEARRTQPVLFPDTSLDSIPVLACERSESRTDLVHHFEKGTKLGETFDSDSSEMFLSVEAKRYKIYPLALSPIYEDDSSQEDILSSEVSPGHQGPRKSRESENQSSSVLSLLQSVSERLKMNFDEDDREGAEEEEEEEAAALDKGDLRAGRREHVTFRLPDPSITFFPDDQESIQISKNSYVMPNDPTTSSLQVGLWPEKTSFLQKSDLTSKLHSSLKSAYHQYLQTSSEKGARFGGIFQEPVSKHFRVQDNPGR…
SIO_010081: CRYBG3
subclass of: SO_0000673
so part of: CRYBG3
location: complement(join(545028..545116,545892..546051,546978..547136,556885..557008,559914..560053,583716..583842,587137..587246,592793..592825,594060..594186,594310..594452,599290..599416,602604..602737,606372..606407,607307..607421,608984..609120,614415..614562,615542..615657,616202..616246,617596..623613))
location: region:545028-623613:-1
so has part: feature:617596-623613:-1:exon
so has part: feature:616202-616246:-1:exon
so has part: feature:615542-615657:-1:exon
so has part: feature:614415-614562:-1:exon
so has part: feature:608984-609120:-1:exon
so has part: feature:607307-607421:-1:exon
so has part: feature:606372-606407:-1:exon
so has part: feature:602604-602737:-1:exon
so has part: feature:599290-599416:-1:exon
so has part: feature:594310-594452:-1:exon
so has part: feature:594060-594186:-1:exon
so has part: feature:592793-592825:-1:exon
so has part: feature:587137-587246:-1:exon
so has part: feature:583716-583842:-1:exon
so has part: feature:559914-560053:-1:exon
so has part: feature:556885-557008:-1:exon
so has part: feature:546978-547136:-1:exon
so has part: feature:545892-546051:-1:exon
so has part: feature:545028-545116:-1:exon

XP_035138793.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:617596-623613:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:616202-616246:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:615542-615657:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:614415-614562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:608984-609120:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:607307-607421:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:606372-606407:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:602604-602737:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:599290-599416:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:594310-594452:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:594060-594186:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:592793-592825:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:587137-587246:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:583716-583842:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:559914-560053:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:556885-557008:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:546978-547136:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:545892-546051:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:545028-545116:-1:exon

LOC100412618
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100412618
note: actin, cytoplasmic 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 553641..555281
location: region:553641-555281:1
so has part: feature:553641-555281:1:exon
subclass of: SO_0000010

100412618
type: Gene
SIO_000068: ncbigene

position:553641:1
position: 553641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:555281:1
position: 555281
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553641-555281:1:exon

LOC100412618
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC100412618
product: actin, cytoplasmic 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_002751780.6
SIO_010081: LOC100412618
subclass of: SO_0000673
so part of: LOC100412618
location: 553641..555281
location: region:553641-555281:1
so has part: feature:553641-555281:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:553641-555281:1:exon

LOC100412618
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC100412618
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: actin, cytoplasmic 1
translation: MDDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
SIO_010081: LOC100412618
subclass of: SO_0000673
so part of: LOC100412618
location: 553742..554869
location: region:553742-554869:1
so has part: feature:553742-554869:1:exon

XP_002751826.2
type: Protein
SIO_000068: ncbiprotein

position:553742:1
position: 553742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:554869:1
position: 554869
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:553742-554869:1:exon

ARL6
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: ARL6
note: ADP ribosylation factor like GTPase 6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(733966..778788)
location: region:733966-778788:-1
so has part: feature:733966-778788:-1:exon
subclass of: SO_0000010

100408731
type: Gene
SIO_000068: ncbigene

position:733966:-1
position: 733966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:778788:-1
position: 778788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:733966-778788:-1:exon

ARL6
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9483
gene: ARL6
product: ADP ribosylation factor like GTPase 6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_008478289.1
SIO_010081: ARL6
so part of: ARL6
location: complement(join(733966..734485,736417..737230,739358..739413,742979..743108,746275..746369,753544..753612,754011..754072,775195..775344,778327..778788))
location: region:733966-778788:-1
so has part: feature:778327-778788:-1:exon
so has part: feature:775195-775344:-1:exon
so has part: feature:754011-754072:-1:exon
so has part: feature:753544-753612:-1:exon
so has part: feature:746275-746369:-1:exon
so has part: feature:742979-743108:-1:exon
so has part: feature:739358-739413:-1:exon
so has part: feature:736417-737230:-1:exon
so has part: feature:733966-734485:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:778327-778788:-1:exon

position:778327:-1
position: 778327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:775195-775344:-1:exon

position:775195:-1
position: 775195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775344:-1
position: 775344
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:754011-754072:-1:exon

position:754011:-1
position: 754011
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:754072:-1
position: 754072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:753544-753612:-1:exon

position:753544:-1
position: 753544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753612:-1
position: 753612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:746275-746369:-1:exon

position:746275:-1
position: 746275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746369:-1
position: 746369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:742979-743108:-1:exon

position:742979:-1
position: 742979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743108:-1
position: 743108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:739358-739413:-1:exon

position:739358:-1
position: 739358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739413:-1
position: 739413
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:736417-737230:-1:exon

position:736417:-1
position: 736417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737230:-1
position: 737230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:733966-734485:-1:exon

position:734485:-1
position: 734485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL6
product: ADP ribosylation factor like GTPase 6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986428.3
SIO_010081: ARL6
subclass of: SO_0000673
so part of: ARL6
location: complement(join(733966..734485,739358..739413,742979..743108,746275..746369,753544..753612,754011..754072,775195..775344,778327..778777))
location: region:733966-778777:-1
so has part: feature:778327-778777:-1:exon
so has part: feature:775195-775344:-1:exon
so has part: feature:754011-754072:-1:exon
so has part: feature:753544-753612:-1:exon
so has part: feature:746275-746369:-1:exon
so has part: feature:742979-743108:-1:exon
so has part: feature:739358-739413:-1:exon
so has part: feature:733966-734485:-1:exon

position:778777:-1
position: 778777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:778327-778777:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:775195-775344:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:754011-754072:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:753544-753612:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:746275-746369:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:742979-743108:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:739358-739413:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:733966-734485:-1:exon

ARL6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 6
translation: MGLLDRLSVLLGLKKKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIIPTTGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVVDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVYWLQDQIQAVKT
SIO_010081: ARL6
subclass of: SO_0000673
so part of: ARL6
location: complement(join(734460..734485,739358..739413,742979..743108,746275..746369,753544..753612,754011..754072,775195..775317))
location: region:734460-775317:-1
so has part: feature:775195-775317:-1:exon
so has part: feature:754011-754072:-1:exon
so has part: feature:753544-753612:-1:exon
so has part: feature:746275-746369:-1:exon
so has part: feature:742979-743108:-1:exon
so has part: feature:739358-739413:-1:exon
so has part: feature:734460-734485:-1:exon

XP_008984676.1
type: Protein
SIO_000068: ncbiprotein

position:734460:-1
position: 734460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:775317:-1
position: 775317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:775195-775317:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:754011-754072:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:753544-753612:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:746275-746369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:742979-743108:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:739358-739413:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:734460-734485:-1:exon

EPHA6
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: EPHA6
note: EPH receptor A6; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(781872..1782724)
location: region:781872-1782724:-1
so has part: feature:781872-1782724:-1:exon
subclass of: SO_0000010

100414735
type: Gene
SIO_000068: ncbigene

position:781872:-1
position: 781872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1782724:-1
position: 1782724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:781872-1782724:-1:exon

EPHA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: EPHA6
product: EPH receptor A6, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248973.1
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(781872..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1329558..1329713,1608486..1609149,1707867..1707931,1781181..1782724))
location: region:781872-1782724:-1
so has part: feature:1781181-1782724:-1:exon
so has part: feature:1707867-1707931:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:781872-793633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1781181-1782724:-1:exon

position:1781181:-1
position: 1781181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1707867-1707931:-1:exon

position:1707867:-1
position: 1707867
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1707931:-1
position: 1707931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608486-1609149:-1:exon

position:1608486:-1
position: 1608486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1609149:-1
position: 1609149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1329558-1329713:-1:exon

position:1329558:-1
position: 1329558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1329713:-1
position: 1329713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1158254-1158378:-1:exon

position:1158254:-1
position: 1158254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158378:-1
position: 1158378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1121551-1121713:-1:exon

position:1121551:-1
position: 1121551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1121713:-1
position: 1121713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1090982-1091090:-1:exon

position:1090982:-1
position: 1090982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1091090:-1
position: 1091090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1087257-1087327:-1:exon

position:1087257:-1
position: 1087257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1087327:-1
position: 1087327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1084136-1084261:-1:exon

position:1084136:-1
position: 1084136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1084261:-1
position: 1084261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1018486-1018671:-1:exon

position:1018486:-1
position: 1018486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1018671:-1
position: 1018671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:954804-954929:-1:exon

position:954804:-1
position: 954804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:954929:-1
position: 954929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:940094-940155:-1:exon

position:940094:-1
position: 940094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:940155:-1
position: 940155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:910877-911086:-1:exon

position:910877:-1
position: 910877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:911086:-1
position: 911086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:824031-824180:-1:exon

position:824031:-1
position: 824031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:824180:-1
position: 824180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:807735-807928:-1:exon

position:807735:-1
position: 807735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:807928:-1
position: 807928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:794591-794740:-1:exon

position:794591:-1
position: 794591
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:794740:-1
position: 794740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:781872-793633:-1:exon

position:793633:-1
position: 793633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: EPHA6
product: EPH receptor A6, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035283338.2
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(781872..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1312667..1313002,1329558..1329713,1608486..1609149,1707867..1707931,1781181..1782724))
location: region:781872-1782724:-1
so has part: feature:1781181-1782724:-1:exon
so has part: feature:1707867-1707931:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1312667-1313002:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:781872-793633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1781181-1782724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1707867-1707931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608486-1609149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329558-1329713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312667-1313002:-1:exon

position:1312667:-1
position: 1312667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1313002:-1
position: 1313002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1158254-1158378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:781872-793633:-1:exon

EPHA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: EPHA6
product: EPH receptor A6, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_002761301.6
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(781872..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1312667..1313002,1329558..1329713,1608486..1609149,1707867..1707931,1781181..1782724))
location: region:781872-1782724:-1
so has part: feature:1781181-1782724:-1:exon
so has part: feature:1707867-1707931:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1312667-1313002:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:781872-793633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1781181-1782724:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1707867-1707931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608486-1609149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329558-1329713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312667-1313002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158254-1158378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:954804-954929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:781872-793633:-1:exon

EPHA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: EPHA6
product: EPH receptor A6, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_017967134.3
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(781872..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1312667..1313002,1329558..1329713,1608486..1609149,1645912..1646031,1707867..1707933))
location: region:781872-1707933:-1
so has part: feature:1707867-1707933:-1:exon
so has part: feature:1645912-1646031:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1312667-1313002:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:781872-793633:-1:exon

position:1707933:-1
position: 1707933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1707867-1707933:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1645912-1646031:-1:exon

position:1645912:-1
position: 1645912
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1646031:-1
position: 1646031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1608486-1609149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329558-1329713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312667-1313002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158254-1158378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:954804-954929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:781872-793633:-1:exon

EPHA6
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: EPHA6
product: EPH receptor A6, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035283340.2
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(781872..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1125970..1126046))
location: region:781872-1126046:-1
so has part: feature:1125970-1126046:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:781872-793633:-1:exon

position:1126046:-1
position: 1126046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1125970-1126046:-1:exon

position:1125970:-1
position: 1125970
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:954804-954929:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:781872-793633:-1:exon

EPHA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: EPHA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X3
translation: MRFPAPPAGRSSRAPQAASSSEAPAPAPGQPGPSCLVPGTSRGGRPGTPPAGRVEEEEEEEEEDADRDPRPTRSTCPRCRHFSVGRRREPGRTMGGREVREFLLQFGLFLPLLTAWPGDCSHVSNNQVVLLDTTAVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLFYMESDESHGIKFKPNQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAVFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGFEEIEGSCHACRPGFYKAFAGNTKCSKCPPHSVTYMEATSVCQCERAYFRAEKDPPSMACTTPSLIGVVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLKPATKYVFHIRVRTAAGYTGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNHLQNGQLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKRSFPAIGVEALCPSFLRAGFLNSIQAPHPVPGGGSLPPRIPAGRPVMIVVEYMENGSLDSFLRKHDGHFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAYRKFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVILSIEEGYRLPAPMGCPASLHQLMLHCWQKERNHRPKFTDIVSFLDKLIRNPSALHTLVEDILVMPESPGEVTEYPLFVTVGDWLDSIKMGQYKNNFMAAGFTTFDLISRMSIDDIRRIGVILIGHQRRIVSSIQTLRLHMMHIQEKGFHV
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(793519..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1329558..1329713,1608486..1609149,1707867..1707931,1781181..1781562))
location: region:793519-1781562:-1
so has part: feature:1781181-1781562:-1:exon
so has part: feature:1707867-1707931:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:793519-793633:-1:exon

XP_054104948.1
type: Protein
SIO_000068: ncbiprotein

position:793519:-1
position: 793519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1781562:-1
position: 1781562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1781181-1781562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1707867-1707931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608486-1609149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329558-1329713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158254-1158378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:954804-954929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793519-793633:-1:exon

EPHA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: EPHA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X2
translation: MRFPAPPAGRSSRAPQAASSSEAPAPAPGQPGPSCLVPGTSRGGRPGTPPAGRVEEEEEEEEEDADRDPRPTRSTCPRCRHFSVGRRREPGRTMGGREVREFLLQFGLFLPLLTAWPGDCSHVSNNQVVLLDTTAVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLFYMESDESHGIKFKPNQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAVFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGFEEIEGSCHACRPGFYKAFAGNTKCSKCPPHSVTYMEATSVCQCERAYFRAEKDPPSMACTRPPSAPRNVVFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGVVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLKPATKYVFHIRVRTAAGYTGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNHLQNGQLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKSRPVMIVVEYMENGSLDSFLRKHDGHFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAYRKFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVILSIEEGYRLPAPMGCPASLHQLMLHCWQKERNHRPKFTDIVSFLDKLIRNPSALHTLVEDILVMPESPGEVTEYPLFVTVGDWLDSIKMGQYKNNFMAAGFTTFDLISRMSIDDIRRIGVILIGHQRRIVSSIQTLRLHMMHIQEKGFHV
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(793519..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1312667..1313002,1329558..1329713,1608486..1609149,1707867..1707931,1781181..1781562))
location: region:793519-1781562:-1
so has part: feature:1781181-1781562:-1:exon
so has part: feature:1707867-1707931:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1312667-1313002:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:793519-793633:-1:exon

XP_035139229.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1781181-1781562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1707867-1707931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608486-1609149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329558-1329713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312667-1313002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158254-1158378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793519-793633:-1:exon

EPHA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: EPHA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X1
translation: MRFPAPPAGRSSRAPQAASSSEAPAPAPGQPGPSCLVPGTSRGGRPGTPPAGRVEEEEEEEEEDADRDPRPTRSTCPRCRHFSVGRRREPGRTMGGREVREFLLQFGLFLPLLTAWPGDCSHVSNNQVVLLDTTAVLGELGWKTYPLNGWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLFYMESDESHGIKFKPNQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAVFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGFEEIEGSCHACRPGFYKAFAGNTKCSKCPPHSVTYMEATSVCQCERAYFRAEKDPPSMACTRPPSAPRNVVFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGVVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLKPATKYVFHIRVRTAAGYTGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNHLQNGQLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKRSFPAIGVEALCPSFLRAGFLNSIQAPHPVPGGGSLPPRIPAGRPVMIVVEYMENGSLDSFLRKHDGHFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAYRKFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVILSIEEGYRLPAPMGCPASLHQLMLHCWQKERNHRPKFTDIVSFLDKLIRNPSALHTLVEDILVMPESPGEVTEYPLFVTVGDWLDSIKMGQYKNNFMAAGFTTFDLISRMSIDDIRRIGVILIGHQRRIVSSIQTLRLHMMHIQEKGFHV
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(793519..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1312667..1313002,1329558..1329713,1608486..1609149,1707867..1707931,1781181..1781562))
location: region:793519-1781562:-1
so has part: feature:1781181-1781562:-1:exon
so has part: feature:1707867-1707931:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1312667-1313002:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:793519-793633:-1:exon

XP_002761347.4
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1781181-1781562:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1707867-1707931:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1608486-1609149:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1329558-1329713:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1312667-1313002:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1158254-1158378:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:954804-954929:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:793519-793633:-1:exon

EPHA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: EPHA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X4
translation: MLLLLWMYMLQLHRSQWDAITEMDEHNRPIHTYQVCNVMEPNQNNWLRTNWISRDAAQKIYVEMKFTLRDCNSIPWVLGTCKETFNLFYMESDESHGIKFKPNQYTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVERKGFYLAFQDIGACIALVSVRVFYKKCPFTVRNLAVFPDTIPRVDSSSLVEVRGSCVKSAEERDTPKLYCGADGDWLVPLGRCICSTGFEEIEGSCHACRPGFYKAFAGNTKCSKCPPHSVTYMEATSVCQCERAYFRAEKDPPSMACTRPPSAPRNVVFNINETALILEWSPPSDTGGRKDLTYSVICKKCGLDTSQCEDCGGGLRFIPRHTGLINSSVIVLDFVSHVNYTFEIEAMNGVSELSFSPKPFTAITVTTDQDAPSLIGVVRKDWASQNSIALSWQAPAFSNGAILDYEIKYYEKEHEQLTYSSTRSKAPSVIITGLKPATKYVFHIRVRTAAGYTGYSQKFEFETGDETSDMAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNHLQNGQLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKRSFPAIGVEALCPSFLRAGFLNSIQAPHPVPGGGSLPPRIPAGRPVMIVVEYMENGSLDSFLRKHDGHFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAYRKFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVILSIEEGYRLPAPMGCPASLHQLMLHCWQKERNHRPKFTDIVSFLDKLIRNPSALHTLVEDILVMPESPGEVTEYPLFVTVGDWLDSIKMGQYKNNFMAAGFTTFDLISRMSIDDIRRIGVILIGHQRRIVSSIQTLRLHMMHIQEKGFHV
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(793519..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091090,1121551..1121713,1158254..1158378,1312667..1313002,1329558..1329713,1608486..1609149,1645912..1645959))
location: region:793519-1645959:-1
so has part: feature:1645912-1645959:-1:exon
so has part: feature:1608486-1609149:-1:exon
so has part: feature:1329558-1329713:-1:exon
so has part: feature:1312667-1313002:-1:exon
so has part: feature:1158254-1158378:-1:exon
so has part: feature:1121551-1121713:-1:exon
so has part: feature:1090982-1091090:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:793519-793633:-1:exon

XP_017822623.1
type: Protein
SIO_000068: ncbiprotein

position:1645959:-1
position: 1645959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1645912-1645959:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1608486-1609149:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1329558-1329713:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1312667-1313002:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1158254-1158378:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1121551-1121713:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1090982-1091090:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:954804-954929:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:793519-793633:-1:exon

EPHA6
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: EPHA6
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 6 isoform X5
translation: MAAEQGQILVIATAAVGGFTLLVILTLFFLITGRCQWYIKAKMKSEEKRRNHLQNGQLRFPGIKTYIDPDTYEDPSLAVHEFAKEIDPSRIRIERVIGAGEFGEVCSGRLKTPGKREIPVAIKTLKGGHMDRQRRDFLREASIMGQFDHPNIIRLEGVVTKRSFPAIGVEALCPSFLRAGFLNSIQAPHPVPGGGSLPPRIPAGRPVMIVVEYMENGSLDSFLRKHDGHFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAYRKFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVILSIEEGYRLPAPMGCPASLHQLMLHCWQKERNHRPKFTDIVSFLDKLIRNPSALHTLVEDILVMPESPGEVTEYPLFVTVGDWLDSIKMGQYKNNFMAAGFTTFDLISRMSIDDIRRIGVILIGHQRRIVSSIQTLRLHMMHIQEKGFHV
SIO_010081: EPHA6
subclass of: SO_0000673
so part of: EPHA6
location: complement(join(793519..793633,794591..794740,807735..807928,824031..824180,910877..911086,940094..940155,954804..954929,1018486..1018671,1084136..1084261,1087257..1087327,1090982..1091082))
location: region:793519-1091082:-1
so has part: feature:1090982-1091082:-1:exon
so has part: feature:1087257-1087327:-1:exon
so has part: feature:1084136-1084261:-1:exon
so has part: feature:1018486-1018671:-1:exon
so has part: feature:954804-954929:-1:exon
so has part: feature:940094-940155:-1:exon
so has part: feature:910877-911086:-1:exon
so has part: feature:824031-824180:-1:exon
so has part: feature:807735-807928:-1:exon
so has part: feature:794591-794740:-1:exon
so has part: feature:793519-793633:-1:exon

XP_035139231.1
type: Protein
SIO_000068: ncbiprotein

position:1091082:-1
position: 1091082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1090982-1091082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1087257-1087327:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1084136-1084261:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1018486-1018671:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:954804-954929:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:940094-940155:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:910877-911086:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:824031-824180:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:807735-807928:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:794591-794740:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:793519-793633:-1:exon

LOC118150043
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150043
note: U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(1483635..1483769)
location: region:1483635-1483769:-1
so has part: feature:1483635-1483769:-1:exon
subclass of: SO_0000623

118150043
type: Gene
SIO_000068: ncbigene

position:1483635:-1
position: 1483635
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1483769:-1
position: 1483769
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1483635-1483769:-1:exon

LOC118150043
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150043
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737804.1
SIO_010081: LOC118150043
subclass of: SO_0000673
so part of: LOC118150043
location: complement(1483635..1483769)
location: region:1483635-1483769:-1
so has part: feature:1483635-1483769:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1483635-1483769:-1:exon

LOC118150052
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150052
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1671718..1671820
location: region:1671718-1671820:1
so has part: feature:1671718-1671820:1:exon
subclass of: SO_0000623

118150052
type: Gene
SIO_000068: ncbigene

position:1671718:1
position: 1671718
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1671820:1
position: 1671820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1671718-1671820:1:exon

LOC118150052
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150052
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737813.1
SIO_010081: LOC118150052
subclass of: SO_0000673
so part of: LOC118150052
location: 1671718..1671820
location: region:1671718-1671820:1
so has part: feature:1671718-1671820:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1671718-1671820:1:exon

LOC118150053
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150053
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 1945290..1945394
location: region:1945290-1945394:1
so has part: feature:1945290-1945394:1:exon
subclass of: SO_0000623

118150053
type: Gene
SIO_000068: ncbigene

position:1945290:1
position: 1945290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1945394:1
position: 1945394
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1945290-1945394:1:exon

LOC118150053
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150053
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737814.1
SIO_010081: LOC118150053
subclass of: SO_0000673
so part of: LOC118150053
location: 1945290..1945394
location: region:1945290-1945394:1
so has part: feature:1945290-1945394:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1945290-1945394:1:exon

LOC100415449
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100415449
note: histone-binding protein RBBP4-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1981345..1982741)
location: region:1981345-1982741:-1
so has part: feature:1981345-1982741:-1:exon

100415449
type: Gene
SIO_000068: ncbigene

position:1981345:-1
position: 1981345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1982741:-1
position: 1982741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981345-1982741:-1:exon

LOC100415449
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100415449
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC100415449
subclass of: SO_0000673
so part of: LOC100415449
location: complement(1981345..1981959)
location: region:1981345-1981959:-1
so has part: feature:1981345-1981959:-1:exon

position:1981959:-1
position: 1981959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1981345-1981959:-1:exon

LOC100415449
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100415449
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC100415449
subclass of: SO_0000673
so part of: LOC100415449
location: complement(1982670..1982741)
location: region:1982670-1982741:-1
so has part: feature:1982670-1982741:-1:exon

position:1982670:-1
position: 1982670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1982670-1982741:-1:exon

LOC118149901
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149901
note: uncharacterized LOC118149901; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2064146..2067806)
location: region:2064146-2067806:-1
so has part: feature:2064146-2067806:-1:exon
subclass of: SO_0000011

118149901
type: Gene
SIO_000068: ncbigene

position:2064146:-1
position: 2064146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2067806:-1
position: 2067806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2064146-2067806:-1:exon

LOC118149901
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149901
product: uncharacterized LOC118149901
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737651.2
SIO_010081: LOC118149901
subclass of: SO_0000673
so part of: LOC118149901
location: complement(join(2064146..2066226,2067365..2067480,2067658..2067806))
location: region:2064146-2067806:-1
so has part: feature:2067658-2067806:-1:exon
so has part: feature:2067365-2067480:-1:exon
so has part: feature:2064146-2066226:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2067658-2067806:-1:exon

position:2067658:-1
position: 2067658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2067365-2067480:-1:exon

position:2067365:-1
position: 2067365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2067480:-1
position: 2067480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2064146-2066226:-1:exon

position:2066226:-1
position: 2066226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118150009
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150009
note: small nucleolar RNA U13; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 2274273..2274376
location: region:2274273-2274376:1
so has part: feature:2274273-2274376:1:exon
subclass of: SO_0000578

118150009
type: Gene
SIO_000068: ncbigene

position:2274273:1
position: 2274273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2274376:1
position: 2274376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2274273-2274376:1:exon

LOC118150009
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snoRNA
gene: LOC118150009
product: small nucleolar RNA U13
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737778.2
SIO_010081: LOC118150009
subclass of: SO_0000673
so part of: LOC118150009
location: 2274273..2274376
location: region:2274273-2274376:1
so has part: feature:2274273-2274376:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2274273-2274376:1:exon

LOC100385314
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100385314
note: 60S ribosomal protein L35a-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 2809100..2809474
location: region:2809100-2809474:1
so has part: feature:2809100-2809474:1:exon

100385314
type: Gene
SIO_000068: ncbigene

position:2809100:1
position: 2809100
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2809474:1
position: 2809474
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2809100-2809474:1:exon

LOC100385314
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100385314
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins
pseudo: true
SIO_010081: LOC100385314
subclass of: SO_0000673
so part of: LOC100385314
location: 2809100..2809474
location: region:2809100-2809474:1
so has part: feature:2809100-2809474:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2809100-2809474:1:exon

LOC118149938
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149938
note: uncharacterized LOC118149938; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3361611..3390618
location: region:3361611-3390618:1
so has part: feature:3361611-3390618:1:exon
subclass of: SO_0000011

118149938
type: Gene
SIO_000068: ncbigene

position:3361611:1
position: 3361611
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3390618:1
position: 3390618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3361611-3390618:1:exon

LOC118149938
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149938
product: uncharacterized LOC118149938
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737712.2
SIO_010081: LOC118149938
subclass of: SO_0000673
so part of: LOC118149938
location: join(3361611..3361692,3389030..3389188,3390037..3390618)
location: region:3361611-3390618:1
so has part: feature:3361611-3361692:1:exon
so has part: feature:3389030-3389188:1:exon
so has part: feature:3390037-3390618:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3361611-3361692:1:exon

position:3361692:1
position: 3361692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3389030-3389188:1:exon

position:3389030:1
position: 3389030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3389188:1
position: 3389188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3390037-3390618:1:exon

position:3390037:1
position: 3390037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128930336
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930336
note: uncharacterized LOC128930336; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3478207..3536564
location: region:3478207-3536564:1
so has part: feature:3478207-3536564:1:exon
subclass of: SO_0000011

128930336
type: Gene
SIO_000068: ncbigene

position:3478207:1
position: 3478207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3536564:1
position: 3536564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3478207-3536564:1:exon

LOC128930336
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC128930336
product: uncharacterized LOC128930336
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008478274.1
SIO_010081: LOC128930336
subclass of: SO_0000673
so part of: LOC128930336
location: join(3478207..3478407,3486240..3486367,3526890..3526982,3535973..3536564)
location: region:3478207-3536564:1
so has part: feature:3478207-3478407:1:exon
so has part: feature:3486240-3486367:1:exon
so has part: feature:3526890-3526982:1:exon
so has part: feature:3535973-3536564:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3478207-3478407:1:exon

position:3478407:1
position: 3478407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3486240-3486367:1:exon

position:3486240:1
position: 3486240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3486367:1
position: 3486367
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3526890-3526982:1:exon

position:3526890:1
position: 3526890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3526982:1
position: 3526982
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3535973-3536564:1:exon

position:3535973:1
position: 3535973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC100386375
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100386375
note: WD repeat-containing protein 82-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3558356..3562565
location: region:3558356-3562565:1
so has part: feature:3558356-3562565:1:exon
subclass of: SO_0000010

100386375
type: Gene
SIO_000068: ncbigene

position:3558356:1
position: 3558356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3562565:1
position: 3562565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3558356-3562565:1:exon

LOC100386375
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC100386375
product: WD repeat-containing protein 82-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 long SRA reads, 12 Proteins
transcript id: XM_035282956.2
SIO_010081: LOC100386375
subclass of: SO_0000673
so part of: LOC100386375
location: 3558356..3562565
location: region:3558356-3562565:1
so has part: feature:3558356-3562565:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3558356-3562565:1:exon

LOC100386375
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC100386375
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: WD repeat-containing protein 82-like
translation: MKLTEDVLRSFRVAKVFCENSDKINCLDFSPSGHWVVSSSADDSIVLYDLREGKAQRTLYSRKYGAGLIRYARDAGSVLCSSSKRDDTIRHLSLHDNKYIRYFPGHSRRVVALCVSPADDIFVSGSLDRTVRLWDLRAPNCQGLVHLRGRPLCAFGPDGLVLAAAVSSRAVKLYDLRALDKGPFATFRTRCDRPCDWTGLRFSGDGRLLLIATNAGFLCLLDAFSGALLHTFAGHANATAAALEAAFTPDSRFVMTGSEDGKIHAWSGESGAEVAVLDGKHAGPVSCLQFNPKFMTFASACSRMLFWLPTVDESA
SIO_010081: LOC100386375
subclass of: SO_0000673
so part of: LOC100386375
location: 3558454..3559401
location: region:3558454-3559401:1
so has part: feature:3558454-3559401:1:exon

XP_035138847.1
type: Protein
SIO_000068: ncbiprotein

position:3558454:1
position: 3558454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3559401:1
position: 3559401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3558454-3559401:1:exon

LOC128930342
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930342
note: uncharacterized LOC128930342; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4059532..4065297)
location: region:4059532-4065297:-1
so has part: feature:4059532-4065297:-1:exon
subclass of: SO_0000011

128930342
type: Gene
SIO_000068: ncbigene

position:4059532:-1
position: 4059532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4065297:-1
position: 4065297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4059532-4065297:-1:exon

LOC128930342
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC128930342
product: uncharacterized LOC128930342
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 long SRA reads
transcript id: XR_008478301.1
SIO_010081: LOC128930342
subclass of: SO_0000673
so part of: LOC128930342
location: complement(join(4059532..4062655,4063678..4063843,4064916..4065297))
location: region:4059532-4065297:-1
so has part: feature:4064916-4065297:-1:exon
so has part: feature:4063678-4063843:-1:exon
so has part: feature:4059532-4062655:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4064916-4065297:-1:exon

position:4064916:-1
position: 4064916
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4063678-4063843:-1:exon

position:4063678:-1
position: 4063678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4063843:-1
position: 4063843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4059532-4062655:-1:exon

position:4062655:-1
position: 4062655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSUN3
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: NSUN3
note: NOP2/Sun RNA methyltransferase 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4370065..4439735)
location: region:4370065-4439735:-1
so has part: feature:4370065-4439735:-1:exon
subclass of: SO_0000010

100896468
type: Gene
SIO_000068: ncbigene

position:4370065:-1
position: 4370065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4439735:-1
position: 4439735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4370065-4439735:-1:exon

NSUN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: NSUN3
product: NOP2/Sun RNA methyltransferase 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986434.4
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4370065..4380633,4416959..4417080,4417815..4417969,4428063..4428406,4438309..4438418,4439600..4439735))
location: region:4370065-4439735:-1
so has part: feature:4439600-4439735:-1:exon
so has part: feature:4438309-4438418:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4370065-4380633:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4439600-4439735:-1:exon

position:4439600:-1
position: 4439600
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4438309-4438418:-1:exon

position:4438309:-1
position: 4438309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4438418:-1
position: 4438418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4428063-4428406:-1:exon

position:4428063:-1
position: 4428063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4428406:-1
position: 4428406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4417815-4417969:-1:exon

position:4417815:-1
position: 4417815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4417969:-1
position: 4417969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4416959-4417080:-1:exon

position:4416959:-1
position: 4416959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4417080:-1
position: 4417080
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4370065-4380633:-1:exon

position:4380633:-1
position: 4380633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSUN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: NSUN3
product: NOP2/Sun RNA methyltransferase 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282815.2
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4370065..4380633,4416959..4417080,4417815..4417969,4428063..4428406,4438314..4438418,4439600..4439627))
location: region:4370065-4439627:-1
so has part: feature:4439600-4439627:-1:exon
so has part: feature:4438314-4438418:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4370065-4380633:-1:exon

position:4439627:-1
position: 4439627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439600-4439627:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438314-4438418:-1:exon

position:4438314:-1
position: 4438314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4428063-4428406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4417815-4417969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416959-4417080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4370065-4380633:-1:exon

NSUN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: NSUN3
product: NOP2/Sun RNA methyltransferase 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282814.2
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4370065..4380633,4416959..4417080,4417815..4417969,4428063..4428406,4428514..4430460))
location: region:4370065-4430460:-1
so has part: feature:4428514-4430460:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4370065-4380633:-1:exon

position:4430460:-1
position: 4430460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4428514-4430460:-1:exon

position:4428514:-1
position: 4428514
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4428063-4428406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4417815-4417969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416959-4417080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4370065-4380633:-1:exon

NSUN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1
translation: MLTPLKGKSEGKLAKQICKVVLDHFENQYSKELGDAWTTVREILTSPSCWQYAVLLNRFNYPFELEKDLHLKGYHTLSQGSFPNYPKSMKCYLSRTPGRIPSERHQVGNLKKYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSVALLQCACPGYLHCNEYDSLRFRWLRQTLESFIPQPLINVIKVSELDGRKMGDAQPEMFDKVLVDAPCSNDRSWLFSSDSQKASCRISQGRNLPLLQIELLRSAIKALRPGGTLVYSTCTLSKAENQDVIGEILSSHSNMVPADIKGIARTCSRDFTFAPTGQECGLLVIPGKGKAWGPMYVAKLKKSWSTGKW
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4380354..4380633,4416959..4417080,4417815..4417969,4428063..4428406,4438309..4438418,4439600..4439611))
location: region:4380354-4439611:-1
so has part: feature:4439600-4439611:-1:exon
so has part: feature:4438309-4438418:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4380354-4380633:-1:exon

XP_008984682.3
type: Protein
SIO_000068: ncbiprotein

position:4380354:-1
position: 4380354
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4439611:-1
position: 4439611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439600-4439611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438309-4438418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4428063-4428406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4417815-4417969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416959-4417080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4380354-4380633:-1:exon

NSUN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X3
translation: MPGLREILTSPSCWQYAVLLNRFNYPFELEKDLHLKGYHTLSQGSFPNYPKSMKCYLSRTPGRIPSERHQVGNLKKYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSVALLQCACPGYLHCNEYDSLRFRWLRQTLESFIPQPLINVIKVSELDGRKMGDAQPEMFDKVLVDAPCSNDRSWLFSSDSQKASCRISQGRNLPLLQIELLRSAIKALRPGGTLVYSTCTLSKAENQDVIGEILSSHSNMVPADIKGIARTCSRDFTFAPTGQECGLLVIPGKGKAWGPMYVAKLKKSWSTGKW
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4380354..4380633,4416959..4417080,4417815..4417969,4428063..4428406,4438314..4438327))
location: region:4380354-4438327:-1
so has part: feature:4438314-4438327:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4380354-4380633:-1:exon

XP_035138706.2
type: Protein
SIO_000068: ncbiprotein

position:4438327:-1
position: 4438327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4438314-4438327:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4428063-4428406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4417815-4417969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416959-4417080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4380354-4380633:-1:exon

NSUN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X2
translation: MLELVLSEPHEAKGRVRHTDPLSANHREILTSPSCWQYAVLLNRFNYPFELEKDLHLKGYHTLSQGSFPNYPKSMKCYLSRTPGRIPSERHQVGNLKKYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSVALLQCACPGYLHCNEYDSLRFRWLRQTLESFIPQPLINVIKVSELDGRKMGDAQPEMFDKVLVDAPCSNDRSWLFSSDSQKASCRISQGRNLPLLQIELLRSAIKALRPGGTLVYSTCTLSKAENQDVIGEILSSHSNMVPADIKGIARTCSRDFTFAPTGQECGLLVIPGKGKAWGPMYVAKLKKSWSTGKW
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4380354..4380633,4416959..4417080,4417815..4417969,4428063..4428406,4428514..4428593))
location: region:4380354-4428593:-1
so has part: feature:4428514-4428593:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4380354-4380633:-1:exon

XP_035138705.2
type: Protein
SIO_000068: ncbiprotein

position:4428593:-1
position: 4428593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4428514-4428593:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4428063-4428406:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4417815-4417969:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4416959-4417080:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4380354-4380633:-1:exon

NSUN3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: NSUN3
product: NOP2/Sun RNA methyltransferase 3, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 33 ESTs, 1 long SRA read
transcript id: XM_008986437.4
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4393494..4398260,4416959..4417080,4417815..4417969,4428063..4428406,4438309..4438418,4439600..4439735))
location: region:4393494-4439735:-1
so has part: feature:4439600-4439735:-1:exon
so has part: feature:4438309-4438418:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4393494-4398260:-1:exon

position:4393494:-1
position: 4393494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439600-4439735:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438309-4438418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4428063-4428406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4417815-4417969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416959-4417080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4393494-4398260:-1:exon

position:4398260:-1
position: 4398260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NSUN3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: NSUN3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X4
translation: MLTPLKGKSEGKLAKQICKVVLDHFENQYSKELGDAWTTVREILTSPSCWQYAVLLNRFNYPFELEKDLHLKGYHTLSQGSFPNYPKSMKCYLSRTPGRIPSERHQVGNLKKYYLLNAASLLPVLALELRDGEKVLDLCAAPGGKSVALLQCACPGYLHCNEYDSLRFRWLRQTLESFIPQPLINVIKVSELDGRKMGDAQPEMFDKVLVDAPCSNDRSWLFSSDSQKASCRISQGRNLPLLQIELLRSVSCHCSVLLVLLKKYSFFKVKASCQWKEDDYQHCFCFSGCR
SIO_010081: NSUN3
subclass of: SO_0000673
so part of: NSUN3
location: complement(join(4398131..4398260,4416959..4417080,4417815..4417969,4428063..4428406,4438309..4438418,4439600..4439611))
location: region:4398131-4439611:-1
so has part: feature:4439600-4439611:-1:exon
so has part: feature:4438309-4438418:-1:exon
so has part: feature:4428063-4428406:-1:exon
so has part: feature:4417815-4417969:-1:exon
so has part: feature:4416959-4417080:-1:exon
so has part: feature:4398131-4398260:-1:exon

XP_008984685.3
type: Protein
SIO_000068: ncbiprotein

position:4398131:-1
position: 4398131
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439600-4439611:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4438309-4438418:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4428063-4428406:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4417815-4417969:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4416959-4417080:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4398131-4398260:-1:exon

DHFR2
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: DHFR2
note: dihydrofolate reductase 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4439841..4445178
location: region:4439841-4445178:1
so has part: feature:4439841-4445178:1:exon
subclass of: SO_0000010

100896506
type: Gene
SIO_000068: ncbigene

position:4439841:1
position: 4439841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4445178:1
position: 4445178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4439841-4445178:1:exon

DHFR2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: DHFR2
product: dihydrofolate reductase 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986433.4
SIO_010081: DHFR2
subclass of: SO_0000673
so part of: DHFR2
location: join(4439841..4439981,4441491..4445178)
location: region:4439841-4445178:1
so has part: feature:4439841-4439981:1:exon
so has part: feature:4441491-4445178:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4439841-4439981:1:exon

position:4439981:1
position: 4439981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4441491-4445178:1:exon

position:4441491:1
position: 4441491
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

DHFR2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: DHFR2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: dihydrofolate reductase 2, mitochondrial
translation: MGIGKKGDLPWPPLRNEFRYFQRMTTTSSIEGKQNLVITGRKTWFSIPEKNRPLKDRINFVLSRELQEPPQGAHFLARSLDDALNLTEQPELANKVDMIWIVGGSSVYKEAMNRPGHLKLFVTRIMQDFESDTFFPEIDLEK
SIO_010081: DHFR2
subclass of: SO_0000673
so part of: DHFR2
location: 4441663..4442091
location: region:4441663-4442091:1
so has part: feature:4441663-4442091:1:exon

XP_008984681.3
type: Protein
SIO_000068: ncbiprotein

position:4441663:1
position: 4441663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4442091:1
position: 4442091
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4441663-4442091:1:exon

ARL13B
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: ARL13B
note: ADP ribosylation factor like GTPase 13B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4447775..4528484)
location: region:4447775-4528484:-1
so has part: feature:4447775-4528484:-1:exon
subclass of: SO_0000010

100413286
type: Gene
SIO_000068: ncbigene

position:4447775:-1
position: 4447775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4528484:-1
position: 4528484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4447775-4528484:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249085.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4528124..4528484))
location: region:4447775-4528484:-1
so has part: feature:4528124-4528484:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4447775-4450077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528484:-1:exon

position:4528124:-1
position: 4528124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4467010-4467115:-1:exon

position:4467010:-1
position: 4467010
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4467115:-1
position: 4467115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4465672-4465874:-1:exon

position:4465672:-1
position: 4465672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4465874:-1
position: 4465874
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4462951-4463059:-1:exon

position:4462951:-1
position: 4462951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4463059:-1
position: 4463059
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4459422-4459647:-1:exon

position:4459422:-1
position: 4459422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4459647:-1
position: 4459647
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4456068-4456184:-1:exon

position:4456068:-1
position: 4456068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4456184:-1
position: 4456184
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4454596-4454664:-1:exon

position:4454596:-1
position: 4454596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4454664:-1
position: 4454664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4447775-4450077:-1:exon

position:4450077:-1
position: 4450077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249080.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4512898..4512987,4528124..4528484))
location: region:4447775-4528484:-1
so has part: feature:4528124-4528484:-1:exon
so has part: feature:4512898-4512987:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4447775-4450077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4512898-4512987:-1:exon

position:4512898:-1
position: 4512898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4512987:-1
position: 4512987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4509601-4509671:-1:exon

position:4509601:-1
position: 4509601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4509671:-1
position: 4509671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4501556-4501805:-1:exon

position:4501556:-1
position: 4501556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4501805:-1
position: 4501805
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447775-4450077:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249079.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4512898..4512987,4528124..4528484))
location: region:4447775-4528484:-1
so has part: feature:4528124-4528484:-1:exon
so has part: feature:4512898-4512987:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4447775-4450077:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528484:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4512898-4512987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4447775-4450077:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249082.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4528124..4528483))
location: region:4447775-4528483:-1
so has part: feature:4528124-4528483:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4447775-4450077:-1:exon

position:4528483:-1
position: 4528483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528483:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4447775-4450077:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249081.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4528124..4528482))
location: region:4447775-4528482:-1
so has part: feature:4528124-4528482:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4447775-4450077:-1:exon

position:4528482:-1
position: 4528482
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528482:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447775-4450077:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249084.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4528124..4528261))
location: region:4447775-4528261:-1
so has part: feature:4528124-4528261:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4447775-4450077:-1:exon

position:4528261:-1
position: 4528261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4447775-4450077:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249086.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509667,4528124..4528253))
location: region:4447775-4528253:-1
so has part: feature:4528124-4528253:-1:exon
so has part: feature:4509601-4509667:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4447775-4450077:-1:exon

position:4528253:-1
position: 4528253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528253:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4509601-4509667:-1:exon

position:4509667:-1
position: 4509667
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4447775-4450077:-1:exon

ARL13B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ARL13B
product: ADP ribosylation factor like GTPase 13B, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249083.1
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4447775..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4512898..4512967,4528124..4528236))
location: region:4447775-4528236:-1
so has part: feature:4528124-4528236:-1:exon
so has part: feature:4512898-4512967:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4447775-4450077:-1:exon

position:4528236:-1
position: 4528236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528236:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4512898-4512967:-1:exon

position:4512967:-1
position: 4512967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4447775-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X7
translation: MFSLMATCCGWFKRWREPVRLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETRHNDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4528124..4528182))
location: region:4450001-4528182:-1
so has part: feature:4528124-4528182:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105060.1
type: Protein
SIO_000068: ncbiprotein

position:4450001:-1
position: 4450001
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4528182:-1
position: 4528182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4450001-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X4
translation: MFSLMATCCGWFKRWREPVRKVTLVMLGLDNAGKTATAKGIQGECPEDVGPTVGFSKINLRQGKFEVTIFDLGGGKRIRGIWKNYFAESFGVIFVVDSSDEERMEETKEAMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4528124..4528182))
location: region:4450001-4528182:-1
so has part: feature:4528124-4528182:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105057.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4450001-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X3
translation: MFSLMATCCGWFKRWREPVRKVTLVMLGLDNAGKTATAKGIQGECPEDVGPTVGFSKINLRQGKFEVTIFDLGGGKRIRGIWKNYFAESFGVIFVVDSSDEERMEETKEAMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETRHNDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4528124..4528182))
location: region:4450001-4528182:-1
so has part: feature:4528124-4528182:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105056.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4450001-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X2
translation: MFSLMATCCGWFKRWREPVSVSLCCPGWSARGAVSFHCNLRLPGSSDSCRKVTLVMLGLDNAGKTATAKGIQGECPEDVGPTVGFSKINLRQGKFEVTIFDLGGGKRIRGIWKNYFAESFGVIFVVDSSDEERMEETKEAMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4512898..4512987,4528124..4528182))
location: region:4450001-4528182:-1
so has part: feature:4528124-4528182:-1:exon
so has part: feature:4512898-4512987:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105055.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4512898-4512987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4450001-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X1
translation: MFSLMATCCGWFKRWREPVSVSLCCPGWSARGAVSFHCNLRLPGSSDSCRKVTLVMLGLDNAGKTATAKGIQGECPEDVGPTVGFSKINLRQGKFEVTIFDLGGGKRIRGIWKNYFAESFGVIFVVDSSDEERMEETKEAMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETRHNDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509671,4512898..4512987,4528124..4528182))
location: region:4450001-4528182:-1
so has part: feature:4528124-4528182:-1:exon
so has part: feature:4512898-4512987:-1:exon
so has part: feature:4509601-4509671:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105054.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4528124-4528182:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4512898-4512987:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4509601-4509671:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4450001-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X5
translation: MLGLDNAGKTATAKGIQGECPEDVGPTVGFSKINLRQGKFEVTIFDLGGGKRIRGIWKNYFAESFGVIFVVDSSDEERMEETKEAMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETRHNDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509655))
location: region:4450001-4509655:-1
so has part: feature:4509601-4509655:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105058.1
type: Protein
SIO_000068: ncbiprotein

position:4509655:-1
position: 4509655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4509601-4509655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4450001-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X5
translation: MLGLDNAGKTATAKGIQGECPEDVGPTVGFSKINLRQGKFEVTIFDLGGGKRIRGIWKNYFAESFGVIFVVDSSDEERMEETKEAMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETRHNDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501805,4509601..4509655))
location: region:4450001-4509655:-1
so has part: feature:4509601-4509655:-1:exon
so has part: feature:4501556-4501805:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105061.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4509601-4509655:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4501556-4501805:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4450001-4450077:-1:exon

ARL13B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ARL13B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor-like protein 13B isoform X6
translation: MEETKEAMSEVLRHPRISGKPVLVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAILGYGKKIDKSIKKGLYWLLHVIARDFDALNERIQKDTAEQRALEEQGRRERAERVRKLREERKQNQQEQAELDGTSGRAELDPEPMNPFQPIASVIIENERKLEKEKKKQKMETDSDGCPLKPKMEPEQMETQGQVNDSGQKNNEFGLLENYKESLTQQLENEDETDQPSLESANGKKKTKKLRMKRNHRVEPLNIDDGAPESPTPPPPPPPVGWGTPKVTRLPKLEPLGETRHNDFYGKPLPPLAVPQRPNSDAHDVIS
SIO_010081: ARL13B
subclass of: SO_0000673
so part of: ARL13B
location: complement(join(4450001..4450077,4454596..4454664,4456068..4456184,4459422..4459647,4462951..4463059,4465672..4465874,4467010..4467115,4501556..4501626))
location: region:4450001-4501626:-1
so has part: feature:4501556-4501626:-1:exon
so has part: feature:4467010-4467115:-1:exon
so has part: feature:4465672-4465874:-1:exon
so has part: feature:4462951-4463059:-1:exon
so has part: feature:4459422-4459647:-1:exon
so has part: feature:4456068-4456184:-1:exon
so has part: feature:4454596-4454664:-1:exon
so has part: feature:4450001-4450077:-1:exon

XP_054105059.1
type: Protein
SIO_000068: ncbiprotein

position:4501626:-1
position: 4501626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4501556-4501626:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4467010-4467115:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4465672-4465874:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4462951-4463059:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4459422-4459647:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4456068-4456184:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4454596-4454664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4450001-4450077:-1:exon

STX19
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: STX19
note: syntaxin 19; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4472874..4498023
location: region:4472874-4498023:1
so has part: feature:4472874-4498023:1:exon
subclass of: SO_0000010

100414369
type: Gene
SIO_000068: ncbigene

position:4472874:1
position: 4472874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4498023:1
position: 4498023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4472874-4498023:1:exon

STX19
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: STX19
product: syntaxin 19
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_002761300.5
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: join(4472874..4473167,4490768..4498023)
location: region:4472874-4498023:1
so has part: feature:4472874-4473167:1:exon
so has part: feature:4490768-4498023:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4472874-4473167:1:exon

position:4473167:1
position: 4473167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4490768-4498023:1:exon

position:4490768:1
position: 4490768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

STX19
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: STX19
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: syntaxin-19
translation: MKDRLQELKQRTKETEVSRDGHVSTAETEEQGLFLQHAVIYEREPVAERHLHEIQRLQESINSLTDNVQKFGQQQKSLVASMRRFSLLKRESTITKEIKIQAEYINRSLNDLVKEVKKSEVENGPSSVVTRILKSQHAAMFRHFQQTMFTYNDTIAAKQEKCKTFIFRQLEVAGKDTTEEEVNDMLHQGKWEVFNESLLTEISITKAQLSEIEQRHKELVNLENQMKDLRDLFIQISLLVEEQGESIDNIEMTVTSTKEYVNNTKEKFGLAVKYQRRNPCRVLCCWCCPCCSSK
SIO_010081: STX19
subclass of: SO_0000673
so part of: STX19
location: 4490781..4491665
location: region:4490781-4491665:1
so has part: feature:4490781-4491665:1:exon

XP_002761346.3
type: Protein
SIO_000068: ncbiprotein

position:4490781:1
position: 4490781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4491665:1
position: 4491665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4490781-4491665:1:exon

LOC118150039
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150039
note: U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 4513952..4514115
location: region:4513952-4514115:1
so has part: feature:4513952-4514115:1:exon

118150039
type: Gene
SIO_000068: ncbigene

position:4513952:1
position: 4513952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4514115:1
position: 4514115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4513952-4514115:1:exon

LOC118150039
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC118150039
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118150039
subclass of: SO_0000673
so part of: LOC118150039
location: 4513952..4514115
location: region:4513952-4514115:1
so has part: feature:4513952-4514115:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4513952-4514115:1:exon

LOC118150060
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150060
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4530632..4530738)
location: region:4530632-4530738:-1
so has part: feature:4530632-4530738:-1:exon
subclass of: SO_0000623

118150060
type: Gene
SIO_000068: ncbigene

position:4530632:-1
position: 4530632
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4530738:-1
position: 4530738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4530632-4530738:-1:exon

LOC118150060
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150060
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737819.1
SIO_010081: LOC118150060
subclass of: SO_0000673
so part of: LOC118150060
location: complement(4530632..4530738)
location: region:4530632-4530738:-1
so has part: feature:4530632-4530738:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4530632-4530738:-1:exon

PROS1
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: PROS1
note: protein S; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4536305..4622167
location: region:4536305-4622167:1
so has part: feature:4536305-4622167:1:exon
subclass of: SO_0000010

100401850
type: Gene
SIO_000068: ncbigene

position:4536305:1
position: 4536305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4622167:1
position: 4622167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4536305-4622167:1:exon

PROS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: PROS1
product: protein S, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282834.2
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(4536305..4536713,4566377..4566534,4569487..4569511,4582339..4582425,4590201..4590323,4590427..4590558,4594663..4594788,4598010..4598131,4599936..4600051,4603464..4603653,4609710..4609877,4611514..4611682,4615112..4615263,4617571..4617796,4620905..4622167)
location: region:4536305-4622167:1
so has part: feature:4536305-4536713:1:exon
so has part: feature:4566377-4566534:1:exon
so has part: feature:4569487-4569511:1:exon
so has part: feature:4582339-4582425:1:exon
so has part: feature:4590201-4590323:1:exon
so has part: feature:4590427-4590558:1:exon
so has part: feature:4594663-4594788:1:exon
so has part: feature:4598010-4598131:1:exon
so has part: feature:4599936-4600051:1:exon
so has part: feature:4603464-4603653:1:exon
so has part: feature:4609710-4609877:1:exon
so has part: feature:4611514-4611682:1:exon
so has part: feature:4615112-4615263:1:exon
so has part: feature:4617571-4617796:1:exon
so has part: feature:4620905-4622167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4536305-4536713:1:exon

position:4536713:1
position: 4536713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4566377-4566534:1:exon

position:4566377:1
position: 4566377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4566534:1
position: 4566534
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4569487-4569511:1:exon

position:4569487:1
position: 4569487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4569511:1
position: 4569511
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4582339-4582425:1:exon

position:4582339:1
position: 4582339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4582425:1
position: 4582425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4590201-4590323:1:exon

position:4590201:1
position: 4590201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4590323:1
position: 4590323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4590427-4590558:1:exon

position:4590427:1
position: 4590427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4590558:1
position: 4590558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4594663-4594788:1:exon

position:4594663:1
position: 4594663
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4594788:1
position: 4594788
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4598010-4598131:1:exon

position:4598010:1
position: 4598010
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4598131:1
position: 4598131
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4599936-4600051:1:exon

position:4599936:1
position: 4599936
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4600051:1
position: 4600051
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4603464-4603653:1:exon

position:4603464:1
position: 4603464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4603653:1
position: 4603653
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4609710-4609877:1:exon

position:4609710:1
position: 4609710
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4609877:1
position: 4609877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4611514-4611682:1:exon

position:4611514:1
position: 4611514
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4611682:1
position: 4611682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4615112-4615263:1:exon

position:4615112:1
position: 4615112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4615263:1
position: 4615263
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4617571-4617796:1:exon

position:4617571:1
position: 4617571
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4617796:1
position: 4617796
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4620905-4622167:1:exon

position:4620905:1
position: 4620905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PROS1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: PROS1
product: protein S, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282835.2
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(4536305..4536713,4566377..4566534,4569487..4569511,4582339..4582425,4590427..4590558,4594663..4594788,4598010..4598131,4599936..4600051,4603464..4603653,4609710..4609877,4611514..4611682,4615112..4615263,4617571..4617796,4620905..4622167)
location: region:4536305-4622167:1
so has part: feature:4536305-4536713:1:exon
so has part: feature:4566377-4566534:1:exon
so has part: feature:4569487-4569511:1:exon
so has part: feature:4582339-4582425:1:exon
so has part: feature:4590427-4590558:1:exon
so has part: feature:4594663-4594788:1:exon
so has part: feature:4598010-4598131:1:exon
so has part: feature:4599936-4600051:1:exon
so has part: feature:4603464-4603653:1:exon
so has part: feature:4609710-4609877:1:exon
so has part: feature:4611514-4611682:1:exon
so has part: feature:4615112-4615263:1:exon
so has part: feature:4617571-4617796:1:exon
so has part: feature:4620905-4622167:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4536305-4536713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4566377-4566534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4569487-4569511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4582339-4582425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4590427-4590558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4594663-4594788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4598010-4598131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4599936-4600051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4603464-4603653:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4609710-4609877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4611514-4611682:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4615112-4615263:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4617571-4617796:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4620905-4622167:1:exon

PROS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: PROS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K-dependent protein S isoform X1
translation: MRVLGGRCGALLACLLLALPVSEANFLSKQQASQVLIRKRRANSMLEETKQGNLERECIEELCNKEEAREVFENDPETDYFYPKYLVCLRSFRSGTFTAARQSTNAYPDLRSCVNAIPDQCSPLPCNEDGYMSCKDGKATFTCICKPGWQGEKCEFDINECKDPSNLNGGCSQICDNTPGSYHCSCKSGFVMLSNKKDCKDVDECSLKPGICGIAVCKNVPGDYECECPEGYRYSLKSKCCEDIDECSENMCAQLCVNYPGGYSCYCDGKKGFKLAQDQKSCEAIPVCLPLNLDTKSELLYLAEQFAGVVLYLKFRLPEISRFTAEFDFRTYDSEGVVLYAESLDHSAWILIAVRDGKFEVQLQNEQTSRITTGGGVVNNGVWHTVSVEELEHSVSLKIAKEAVMNINKLGPLFKPEHGFLETKVYFAGFPRQVESQFIKPINPRLDGCIRGWNLMKQGASGVKEIIQEKQNKHCLVTVEKGSYYPGSGIAKFIIDYNNVSSAEGWHVNVSLNIRPSMGTGVMLALVSRNNTVPFAVSLVDSTSEKLQDILLSVEKTVIYRIEALSLCSDQQSHLELKVNRHSLEVSTPLKMETVSHEDIQKELAILDKAMQGEVVTYLGGLPDVSFSATPANAFYNGCMEVNMNGVLLDLDEAISKHNDIRAHSCPSVWRKTKSS
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(4536638..4536713,4566377..4566534,4569487..4569511,4582339..4582425,4590201..4590323,4590427..4590558,4594663..4594788,4598010..4598131,4599936..4600051,4603464..4603653,4609710..4609877,4611514..4611682,4615112..4615263,4617571..4617796,4620905..4621065)
location: region:4536638-4621065:1
so has part: feature:4536638-4536713:1:exon
so has part: feature:4566377-4566534:1:exon
so has part: feature:4569487-4569511:1:exon
so has part: feature:4582339-4582425:1:exon
so has part: feature:4590201-4590323:1:exon
so has part: feature:4590427-4590558:1:exon
so has part: feature:4594663-4594788:1:exon
so has part: feature:4598010-4598131:1:exon
so has part: feature:4599936-4600051:1:exon
so has part: feature:4603464-4603653:1:exon
so has part: feature:4609710-4609877:1:exon
so has part: feature:4611514-4611682:1:exon
so has part: feature:4615112-4615263:1:exon
so has part: feature:4617571-4617796:1:exon
so has part: feature:4620905-4621065:1:exon

XP_035138725.2
type: Protein
SIO_000068: ncbiprotein

position:4536638:1
position: 4536638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4621065:1
position: 4621065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4536638-4536713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4566377-4566534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4569487-4569511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4582339-4582425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4590201-4590323:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4590427-4590558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4594663-4594788:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4598010-4598131:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4599936-4600051:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4603464-4603653:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4609710-4609877:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4611514-4611682:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4615112-4615263:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4617571-4617796:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4620905-4621065:1:exon

PROS1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: PROS1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: vitamin K-dependent protein S isoform X2
translation: MRVLGGRCGALLACLLLALPVSEANFLSKQQASQVLIRKRRANSMLEETKQGNLERECIEELCNKEEAREVFENDPETDYFYPKYLVCLRSFRSGTFTAARQSTNAYPDLRSCVNDINECKDPSNLNGGCSQICDNTPGSYHCSCKSGFVMLSNKKDCKDVDECSLKPGICGIAVCKNVPGDYECECPEGYRYSLKSKCCEDIDECSENMCAQLCVNYPGGYSCYCDGKKGFKLAQDQKSCEAIPVCLPLNLDTKSELLYLAEQFAGVVLYLKFRLPEISRFTAEFDFRTYDSEGVVLYAESLDHSAWILIAVRDGKFEVQLQNEQTSRITTGGGVVNNGVWHTVSVEELEHSVSLKIAKEAVMNINKLGPLFKPEHGFLETKVYFAGFPRQVESQFIKPINPRLDGCIRGWNLMKQGASGVKEIIQEKQNKHCLVTVEKGSYYPGSGIAKFIIDYNNVSSAEGWHVNVSLNIRPSMGTGVMLALVSRNNTVPFAVSLVDSTSEKLQDILLSVEKTVIYRIEALSLCSDQQSHLELKVNRHSLEVSTPLKMETVSHEDIQKELAILDKAMQGEVVTYLGGLPDVSFSATPANAFYNGCMEVNMNGVLLDLDEAISKHNDIRAHSCPSVWRKTKSS
SIO_010081: PROS1
subclass of: SO_0000673
so part of: PROS1
location: join(4536638..4536713,4566377..4566534,4569487..4569511,4582339..4582425,4590427..4590558,4594663..4594788,4598010..4598131,4599936..4600051,4603464..4603653,4609710..4609877,4611514..4611682,4615112..4615263,4617571..4617796,4620905..4621065)
location: region:4536638-4621065:1
so has part: feature:4536638-4536713:1:exon
so has part: feature:4566377-4566534:1:exon
so has part: feature:4569487-4569511:1:exon
so has part: feature:4582339-4582425:1:exon
so has part: feature:4590427-4590558:1:exon
so has part: feature:4594663-4594788:1:exon
so has part: feature:4598010-4598131:1:exon
so has part: feature:4599936-4600051:1:exon
so has part: feature:4603464-4603653:1:exon
so has part: feature:4609710-4609877:1:exon
so has part: feature:4611514-4611682:1:exon
so has part: feature:4615112-4615263:1:exon
so has part: feature:4617571-4617796:1:exon
so has part: feature:4620905-4621065:1:exon

XP_035138726.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4536638-4536713:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4566377-4566534:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4569487-4569511:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4582339-4582425:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4590427-4590558:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4594663-4594788:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4598010-4598131:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4599936-4600051:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4603464-4603653:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4609710-4609877:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4611514-4611682:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4615112-4615263:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4617571-4617796:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4620905-4621065:1:exon

LOC118149905
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149905
note: uncharacterized LOC118149905; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4691837..4695220)
location: region:4691837-4695220:-1
so has part: feature:4691837-4695220:-1:exon
subclass of: SO_0000011

118149905
type: Gene
SIO_000068: ncbigene

position:4691837:-1
position: 4691837
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4695220:-1
position: 4695220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4691837-4695220:-1:exon

LOC118149905
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149905
product: uncharacterized LOC118149905
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004737656.1
SIO_010081: LOC118149905
subclass of: SO_0000673
so part of: LOC118149905
location: complement(join(4691837..4692013,4695173..4695220))
location: region:4691837-4695220:-1
so has part: feature:4695173-4695220:-1:exon
so has part: feature:4691837-4692013:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4695173-4695220:-1:exon

position:4695173:-1
position: 4695173
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4691837-4692013:-1:exon

position:4692013:-1
position: 4692013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118150032
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150032
note: small nucleolar RNA U3; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(4791883..4792090)
location: region:4791883-4792090:-1
so has part: feature:4791883-4792090:-1:exon
subclass of: SO_0000578

118150032
type: Gene
SIO_000068: ncbigene

position:4791883:-1
position: 4791883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4792090:-1
position: 4792090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4791883-4792090:-1:exon

LOC118150032
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snoRNA
gene: LOC118150032
product: small nucleolar RNA U3
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00012
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737796.2
SIO_010081: LOC118150032
subclass of: SO_0000673
so part of: LOC118150032
location: complement(4791883..4792090)
location: region:4791883-4792090:-1
so has part: feature:4791883-4792090:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4791883-4792090:-1:exon

LOC100403654
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100403654
note: presenilin-2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(4902913..4906122)
location: region:4902913-4906122:-1
so has part: feature:4902913-4906122:-1:exon

100403654
type: Gene
SIO_000068: ncbigene

position:4902913:-1
position: 4902913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4906122:-1
position: 4906122
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4902913-4906122:-1:exon

LOC100403654
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100403654
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC100403654
subclass of: SO_0000673
so part of: LOC100403654
location: complement(4902913..4906122)
location: region:4902913-4906122:-1
so has part: feature:4902913-4906122:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4902913-4906122:-1:exon

EPHA3
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: EPHA3
note: EPH receptor A3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(5264028..5649258)
location: region:5264028-5649258:-1
so has part: feature:5264028-5649258:-1:exon
subclass of: SO_0000010

100405092
type: Gene
SIO_000068: ncbigene

position:5264028:-1
position: 5264028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5649258:-1
position: 5649258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5264028-5649258:-1:exon

EPHA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: EPHA3
product: EPH receptor A3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_002761290.5
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(5264028..5266735,5273570..5273725,5289446..5289639,5290405..5290554,5308899..5309108,5311641..5311702,5321668..5321853,5327745..5327870,5332813..5332880,5333569..5333671,5341206..5341365,5344756..5344880,5390612..5390947,5391638..5391793,5540969..5541629,5627159..5627223,5648989..5649258))
location: region:5264028-5649258:-1
so has part: feature:5648989-5649258:-1:exon
so has part: feature:5627159-5627223:-1:exon
so has part: feature:5540969-5541629:-1:exon
so has part: feature:5391638-5391793:-1:exon
so has part: feature:5390612-5390947:-1:exon
so has part: feature:5344756-5344880:-1:exon
so has part: feature:5341206-5341365:-1:exon
so has part: feature:5333569-5333671:-1:exon
so has part: feature:5332813-5332880:-1:exon
so has part: feature:5327745-5327870:-1:exon
so has part: feature:5321668-5321853:-1:exon
so has part: feature:5311641-5311702:-1:exon
so has part: feature:5308899-5309108:-1:exon
so has part: feature:5290405-5290554:-1:exon
so has part: feature:5289446-5289639:-1:exon
so has part: feature:5273570-5273725:-1:exon
so has part: feature:5264028-5266735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5648989-5649258:-1:exon

position:5648989:-1
position: 5648989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:5627159-5627223:-1:exon

position:5627159:-1
position: 5627159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5627223:-1
position: 5627223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:5540969-5541629:-1:exon

position:5540969:-1
position: 5540969
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5541629:-1
position: 5541629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:5391638-5391793:-1:exon

position:5391638:-1
position: 5391638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5391793:-1
position: 5391793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:5390612-5390947:-1:exon

position:5390612:-1
position: 5390612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5390947:-1
position: 5390947
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:5344756-5344880:-1:exon

position:5344756:-1
position: 5344756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5344880:-1
position: 5344880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:5341206-5341365:-1:exon

position:5341206:-1
position: 5341206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5341365:-1
position: 5341365
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5333569-5333671:-1:exon

position:5333569:-1
position: 5333569
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5333671:-1
position: 5333671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:5332813-5332880:-1:exon

position:5332813:-1
position: 5332813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5332880:-1
position: 5332880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:5327745-5327870:-1:exon

position:5327745:-1
position: 5327745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5327870:-1
position: 5327870
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:5321668-5321853:-1:exon

position:5321668:-1
position: 5321668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5321853:-1
position: 5321853
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:5311641-5311702:-1:exon

position:5311641:-1
position: 5311641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5311702:-1
position: 5311702
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:5308899-5309108:-1:exon

position:5308899:-1
position: 5308899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5309108:-1
position: 5309108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:5290405-5290554:-1:exon

position:5290405:-1
position: 5290405
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5290554:-1
position: 5290554
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:5289446-5289639:-1:exon

position:5289446:-1
position: 5289446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5289639:-1
position: 5289639
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:5273570-5273725:-1:exon

position:5273570:-1
position: 5273570
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5273725:-1
position: 5273725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:5264028-5266735:-1:exon

position:5266735:-1
position: 5266735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

EPHA3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: EPHA3
product: EPH receptor A3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986446.3
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(5264028..5266735,5273570..5273725,5289446..5289639,5290405..5290554,5308899..5309108,5311641..5311702,5321668..5321853,5327745..5327870,5332813..5332880,5333569..5333671,5341206..5341368,5344756..5344880,5390612..5390947,5391638..5391793,5540969..5541629,5627159..5627223,5648989..5649257))
location: region:5264028-5649257:-1
so has part: feature:5648989-5649257:-1:exon
so has part: feature:5627159-5627223:-1:exon
so has part: feature:5540969-5541629:-1:exon
so has part: feature:5391638-5391793:-1:exon
so has part: feature:5390612-5390947:-1:exon
so has part: feature:5344756-5344880:-1:exon
so has part: feature:5341206-5341368:-1:exon
so has part: feature:5333569-5333671:-1:exon
so has part: feature:5332813-5332880:-1:exon
so has part: feature:5327745-5327870:-1:exon
so has part: feature:5321668-5321853:-1:exon
so has part: feature:5311641-5311702:-1:exon
so has part: feature:5308899-5309108:-1:exon
so has part: feature:5290405-5290554:-1:exon
so has part: feature:5289446-5289639:-1:exon
so has part: feature:5273570-5273725:-1:exon
so has part: feature:5264028-5266735:-1:exon

position:5649257:-1
position: 5649257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5648989-5649257:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5627159-5627223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5540969-5541629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391638-5391793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5390612-5390947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5344756-5344880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5341206-5341368:-1:exon

position:5341368:-1
position: 5341368
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:5333569-5333671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5332813-5332880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5327745-5327870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5321668-5321853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5311641-5311702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5308899-5309108:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5290405-5290554:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5289446-5289639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5273570-5273725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5264028-5266735:-1:exon

EPHA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 3 isoform X2
translation: MDCHLSVLLLLSCSALRGSGEVSPQPPNEVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLGTCKETFNLYYMDSDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDPPRMYCSTDGEWLVPIGKCSCKAGYEERGVMCQACRPGFYKALDGNMKCAKCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAMNGVSELSSPPRQFAAVSITTNQAAPSPVLTIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKEQETSYTILRARATNVTISGLKPDTAYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGESSQVVLIAISAAVAIILLTVVIYVLIGRFCGYNKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKVITSAAARPSNLLLDQSNVDITTFRTAGDWLNGVRTAHCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(5266630..5266735,5273570..5273725,5289446..5289639,5290405..5290554,5308899..5309108,5311641..5311702,5321668..5321853,5327745..5327870,5332813..5332880,5333569..5333671,5341206..5341365,5344756..5344880,5390612..5390947,5391638..5391793,5540969..5541629,5627159..5627223,5648989..5649076))
location: region:5266630-5649076:-1
so has part: feature:5648989-5649076:-1:exon
so has part: feature:5627159-5627223:-1:exon
so has part: feature:5540969-5541629:-1:exon
so has part: feature:5391638-5391793:-1:exon
so has part: feature:5390612-5390947:-1:exon
so has part: feature:5344756-5344880:-1:exon
so has part: feature:5341206-5341365:-1:exon
so has part: feature:5333569-5333671:-1:exon
so has part: feature:5332813-5332880:-1:exon
so has part: feature:5327745-5327870:-1:exon
so has part: feature:5321668-5321853:-1:exon
so has part: feature:5311641-5311702:-1:exon
so has part: feature:5308899-5309108:-1:exon
so has part: feature:5290405-5290554:-1:exon
so has part: feature:5289446-5289639:-1:exon
so has part: feature:5273570-5273725:-1:exon
so has part: feature:5266630-5266735:-1:exon

XP_002761336.2
type: Protein
SIO_000068: ncbiprotein

position:5266630:-1
position: 5266630
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5649076:-1
position: 5649076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5648989-5649076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5627159-5627223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5540969-5541629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391638-5391793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5390612-5390947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5344756-5344880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5341206-5341365:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5333569-5333671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5332813-5332880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5327745-5327870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5321668-5321853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5311641-5311702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5308899-5309108:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5290405-5290554:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5289446-5289639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5273570-5273725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5266630-5266735:-1:exon

EPHA3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: EPHA3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ephrin type-A receptor 3 isoform X1
translation: MDCHLSVLLLLSCSALRGSGEVSPQPPNEVNLLDSKTIQGELGWISYPSHGWEEISGVDEHYTPIRTYQVCNVMDHSQNNWLRTNWVPRNSAQKIYVELKFTLRDCNSIPLVLGTCKETFNLYYMDSDDDHGVKFREHQFTKIDTIAADESFTQMDLGDRILKLNTEIREVGPVNKKGFYLAFQDVGACVALVSVRVYFKKCPFTVKNLAMFPDTVPMDSQSLVEVRGSCVNNSKEEDPPRMYCSTDGEWLVPIGKCSCKAGYEERGVMCQACRPGFYKALDGNMKCAKCPPHSSTQEDGSMNCRCENNYFRADKDPPSMACTRPPSSPRNVISNINETSVILDWSWPLDTGGRKDVTFNIICKKCGWNIKQCEPCSPNVRFLPRQFGLTNTTVTVTDLLAHTNYTFEIDAMNGVSELSSPPRQFAAVSITTNQAAPSPVLTIKKDRTSRNSISLSWQEPEHPNGIILDYEVKYYEKQEQETSYTILRARATNVTISGLKPDTAYVFQIRARTAAGYGTNSRKFEFETSPDSFSISGESSQVVLIAISAAVAIILLTVVIYVLIGRFCGYNKSKHGADEKRLHFGNGHLKLPGLRTYVDPHTYEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPGSLKVITSAAARPSNLLLDQSNVDITTFRTAGDWLNGVRTAHCKEIFTGVEYSSCDTIAKISTDDMKKVGVTVVGPQKKIISSIKALETQSKNGPVPV
SIO_010081: EPHA3
subclass of: SO_0000673
so part of: EPHA3
location: complement(join(5266630..5266735,5273570..5273725,5289446..5289639,5290405..5290554,5308899..5309108,5311641..5311702,5321668..5321853,5327745..5327870,5332813..5332880,5333569..5333671,5341206..5341368,5344756..5344880,5390612..5390947,5391638..5391793,5540969..5541629,5627159..5627223,5648989..5649076))
location: region:5266630-5649076:-1
so has part: feature:5648989-5649076:-1:exon
so has part: feature:5627159-5627223:-1:exon
so has part: feature:5540969-5541629:-1:exon
so has part: feature:5391638-5391793:-1:exon
so has part: feature:5390612-5390947:-1:exon
so has part: feature:5344756-5344880:-1:exon
so has part: feature:5341206-5341368:-1:exon
so has part: feature:5333569-5333671:-1:exon
so has part: feature:5332813-5332880:-1:exon
so has part: feature:5327745-5327870:-1:exon
so has part: feature:5321668-5321853:-1:exon
so has part: feature:5311641-5311702:-1:exon
so has part: feature:5308899-5309108:-1:exon
so has part: feature:5290405-5290554:-1:exon
so has part: feature:5289446-5289639:-1:exon
so has part: feature:5273570-5273725:-1:exon
so has part: feature:5266630-5266735:-1:exon

XP_008984694.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:5648989-5649076:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:5627159-5627223:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:5540969-5541629:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:5391638-5391793:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:5390612-5390947:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:5344756-5344880:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:5341206-5341368:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:5333569-5333671:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:5332813-5332880:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:5327745-5327870:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:5321668-5321853:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:5311641-5311702:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:5308899-5309108:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:5290405-5290554:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:5289446-5289639:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:5273570-5273725:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:5266630-5266735:-1:exon

LOC108589403
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC108589403
note: 40S ribosomal protein S15-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 5437428..5437818
location: region:5437428-5437818:1
so has part: feature:5437428-5437818:1:exon
subclass of: SO_0000010

108589403
type: Gene
SIO_000068: ncbigene

position:5437428:1
position: 5437428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5437818:1
position: 5437818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5437428-5437818:1:exon

LOC108589403
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC108589403
product: 40S ribosomal protein S15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 198 ESTs, 29 Proteins
transcript id: XM_035283162.2
SIO_010081: LOC108589403
subclass of: SO_0000673
so part of: LOC108589403
location: 5437428..5437818
location: region:5437428-5437818:1
so has part: feature:5437428-5437818:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5437428-5437818:1:exon

LOC108589403
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC108589403
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S15-like
translation: MQLYSARQRRRLNRGLRWKQHSLLKRLHKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSITYKPVKHGRPGIGATHWSRFIPLK
SIO_010081: LOC108589403
subclass of: SO_0000673
so part of: LOC108589403
location: 5437432..5437770
location: region:5437432-5437770:1
so has part: feature:5437432-5437770:1:exon

XP_035139053.2
type: Protein
SIO_000068: ncbiprotein

position:5437432:1
position: 5437432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:5437770:1
position: 5437770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5437432-5437770:1:exon

LOC100405455
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100405455
note: pantothenate kinase 3-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5721839..5723207)
location: region:5721839-5723207:-1
so has part: feature:5721839-5723207:-1:exon

100405455
type: Gene
SIO_000068: ncbigene

position:5721839:-1
position: 5721839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5723207:-1
position: 5723207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5721839-5723207:-1:exon

LOC100405455
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100405455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC100405455
subclass of: SO_0000673
so part of: LOC100405455
location: complement(5721839..5722812)
location: region:5721839-5722812:-1
so has part: feature:5721839-5722812:-1:exon

position:5722812:-1
position: 5722812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5721839-5722812:-1:exon

LOC100405455
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100405455
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
pseudo: true
SIO_010081: LOC100405455
subclass of: SO_0000673
so part of: LOC100405455
location: complement(5723071..5723207)
location: region:5723071-5723207:-1
so has part: feature:5723071-5723207:-1:exon

position:5723071:-1
position: 5723071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5723071-5723207:-1:exon

LOC100405827
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100405827
note: little elongation complex subunit 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(5806542..5809434)
location: region:5806542-5809434:-1
so has part: feature:5806542-5809434:-1:exon

100405827
type: Gene
SIO_000068: ncbigene

position:5806542:-1
position: 5806542
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5809434:-1
position: 5809434
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5806542-5809434:-1:exon

LOC100405827
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100405827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC100405827
subclass of: SO_0000673
so part of: LOC100405827
location: complement(5806542..5806737)
location: region:5806542-5806737:-1
so has part: feature:5806542-5806737:-1:exon

position:5806737:-1
position: 5806737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5806542-5806737:-1:exon

LOC100405827
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100405827
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
pseudo: true
SIO_010081: LOC100405827
subclass of: SO_0000673
so part of: LOC100405827
location: complement(5806866..5809434)
location: region:5806866-5809434:-1
so has part: feature:5806866-5809434:-1:exon

position:5806866:-1
position: 5806866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5806866-5809434:-1:exon

LOC118149912
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149912
note: uncharacterized LOC118149912; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6099219..6121024
location: region:6099219-6121024:1
so has part: feature:6099219-6121024:1:exon
subclass of: SO_0000011

118149912
type: Gene
SIO_000068: ncbigene

position:6099219:1
position: 6099219
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6121024:1
position: 6121024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6099219-6121024:1:exon

LOC118149912
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149912
product: uncharacterized LOC118149912
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737665.2
SIO_010081: LOC118149912
subclass of: SO_0000673
so part of: LOC118149912
location: join(6099219..6099288,6114446..6114644,6120885..6121024)
location: region:6099219-6121024:1
so has part: feature:6099219-6099288:1:exon
so has part: feature:6114446-6114644:1:exon
so has part: feature:6120885-6121024:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6099219-6099288:1:exon

position:6099288:1
position: 6099288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6114446-6114644:1:exon

position:6114446:1
position: 6114446
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6114644:1
position: 6114644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6120885-6121024:1:exon

position:6120885:1
position: 6120885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128930394
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930394
note: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6131127..6140141)
location: region:6131127-6140141:-1
so has part: feature:6131127-6140141:-1:exon

128930394
type: Gene
SIO_000068: ncbigene

position:6131127:-1
position: 6131127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6140141:-1
position: 6140141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6131127-6140141:-1:exon

LOC128930394
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC128930394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC128930394
subclass of: SO_0000673
so part of: LOC128930394
location: complement(6131127..6131389)
location: region:6131127-6131389:-1
so has part: feature:6131127-6131389:-1:exon

position:6131389:-1
position: 6131389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6131127-6131389:-1:exon

LOC128930394
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC128930394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC128930394
subclass of: SO_0000673
so part of: LOC128930394
location: complement(6131963..6132033)
location: region:6131963-6132033:-1
so has part: feature:6131963-6132033:-1:exon

position:6131963:-1
position: 6131963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6132033:-1
position: 6132033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6131963-6132033:-1:exon

LOC128930394
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC128930394
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC128930394
subclass of: SO_0000673
so part of: LOC128930394
location: complement(6140026..6140141)
location: region:6140026-6140141:-1
so has part: feature:6140026-6140141:-1:exon

position:6140026:-1
position: 6140026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6140026-6140141:-1:exon

CSNKA2IP
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: CSNKA2IP
note: casein kinase 2 subunit alpha' interacting protein; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6225668..6227071)
location: region:6225668-6227071:-1
so has part: feature:6225668-6227071:-1:exon
subclass of: SO_0000010

118149888
type: Gene
SIO_000068: ncbigene

position:6225668:-1
position: 6225668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6227071:-1
position: 6227071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6225668-6227071:-1:exon

CSNKA2IP
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CSNKA2IP
product: casein kinase 2 subunit alpha' interacting protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 4 long SRA reads, 1 Protein
transcript id: XM_054248971.1
SIO_010081: CSNKA2IP
subclass of: SO_0000673
so part of: CSNKA2IP
location: complement(6225668..6227071)
location: region:6225668-6227071:-1
so has part: feature:6225668-6227071:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6225668-6227071:-1:exon

CSNKA2IP
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CSNKA2IP
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase II subunit alpha'-interacting protein
translation: MALTSPFLDSRLQKTSILNSNPTIGSLPLSHSKARESSSYFVHPSESLPSFQLNSQSMLMLDGNFQTPSSPVFHSKFQKSTSPSDKHRVTHLPSPHPETNVSGQLFSSSKHCARNTAASTLGFRLQSKSSCDFSSTTEPNKESQWNLRYSQPCVVKGGTVPDEVVNKIVNSISKSRIQKDLCRQILFRRMRGRPNPRPGPRLSSNYMVCLACASCIKSPCNHLTGKKNPRCATLFVIPTPEANSEGKVEVKLVLILSLPETFSSSVLFPMKENQPNEAPENNPEGVENMPQFSPTSEQDIQRLKMKHKWLTVAPENKVIGQQTQAIDWLFYVKKNNSQPQSLLPPSSSSSTSSSSSSSVASASSASSSSSSSSSSSSISPFSPPYSKEFLTPTFSRRIFPKVLSYHRLPPGVDWLEFICSKDYQLHPRKPNRNQSSSPETKPVRNLNTVKWRKGPNTLFKFFRKMRN
SIO_010081: CSNKA2IP
subclass of: SO_0000673
so part of: CSNKA2IP
location: complement(6225668..6227071)
location: region:6225668-6227071:-1
so has part: feature:6225668-6227071:-1:exon

XP_054104946.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6225668-6227071:-1:exon

LOC128930395
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930395
note: casein kinase II subunit alpha'-interacting protein-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6227165..6229393)
location: region:6227165-6229393:-1
so has part: feature:6227165-6229393:-1:exon
subclass of: SO_0000010

128930395
type: Gene
SIO_000068: ncbigene

position:6227165:-1
position: 6227165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6229393:-1
position: 6229393
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6227165-6229393:-1:exon

LOC128930395
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC128930395
product: casein kinase II subunit alpha'-interacting protein-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs
transcript id: XM_054249166.1
SIO_010081: LOC128930395
subclass of: SO_0000673
so part of: LOC128930395
location: complement(join(6227165..6227866,6229385..6229393))
location: region:6227165-6229393:-1
so has part: feature:6229385-6229393:-1:exon
so has part: feature:6227165-6227866:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6229385-6229393:-1:exon

position:6229385:-1
position: 6229385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6227165-6227866:-1:exon

position:6227866:-1
position: 6227866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128930395
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC128930395
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: casein kinase II subunit alpha'-interacting protein-like
translation: MSLIVPLACYGQHLVPLDHFYQLSSANSLTHQNTGEKLNQFNNQPAAKLQSHSNHFAAPPVSSNRKVQRCSVLPSPESQDKISQSFCDRTLNLPLSHAEHQKTPSRGLHWRSSLWPARRALDYHSLYSKAQTSFSDLTKTSSLELNQPDLSSQLPFSKPRATSSSLDVCWGSPSLKSNQRVSSSSLFHLQNQEIPSVNIICATSSLASKQRALSSALPQSKPQNTSSLDCFWTSSG
SIO_010081: LOC128930395
subclass of: SO_0000673
so part of: LOC128930395
location: complement(join(6227165..6227866,6229385..6229393))
location: region:6227165-6229393:-1
so has part: feature:6229385-6229393:-1:exon
so has part: feature:6227165-6227866:-1:exon

XP_054105141.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6229385-6229393:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6227165-6227866:-1:exon

LOC100400730
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100400730
note: ATP-binding cassette sub-family F member 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(6378258..6380070)
location: region:6378258-6380070:-1
so has part: feature:6378258-6380070:-1:exon

100400730
type: Gene
SIO_000068: ncbigene

position:6378258:-1
position: 6378258
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6380070:-1
position: 6380070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6378258-6380070:-1:exon

LOC100400730
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100400730
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
pseudo: true
SIO_010081: LOC100400730
subclass of: SO_0000673
so part of: LOC100400730
location: complement(6378258..6380070)
location: region:6378258-6380070:-1
so has part: feature:6378258-6380070:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6378258-6380070:-1:exon

LOC118149941
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149941
note: uncharacterized LOC118149941; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6423091..6430486)
location: region:6423091-6430486:-1
so has part: feature:6423091-6430486:-1:exon
subclass of: SO_0000011

118149941
type: Gene
SIO_000068: ncbigene

position:6423091:-1
position: 6423091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6430486:-1
position: 6430486
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6423091-6430486:-1:exon

LOC118149941
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149941
product: uncharacterized LOC118149941
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008478331.1
SIO_010081: LOC118149941
subclass of: SO_0000673
so part of: LOC118149941
location: complement(join(6423091..6424196,6427839..6427978,6430297..6430486))
location: region:6423091-6430486:-1
so has part: feature:6430297-6430486:-1:exon
so has part: feature:6427839-6427978:-1:exon
so has part: feature:6423091-6424196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6430297-6430486:-1:exon

position:6430297:-1
position: 6430297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6427839-6427978:-1:exon

position:6427839:-1
position: 6427839
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6427978:-1
position: 6427978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6423091-6424196:-1:exon

position:6424196:-1
position: 6424196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H3orf38
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: C21H3orf38
note: chromosome 21 C3orf38 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6540033..6547245)
location: region:6540033-6547245:-1
so has part: feature:6540033-6547245:-1:exon
subclass of: SO_0000010

100896821
type: Gene
SIO_000068: ncbigene

position:6540033:-1
position: 6540033
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6547245:-1
position: 6547245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6540033-6547245:-1:exon

C21H3orf38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: C21H3orf38
product: chromosome 21 C3orf38 homolog, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986452.4
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(6540033..6541135,6543721..6543962,6546733..6547245))
location: region:6540033-6547245:-1
so has part: feature:6546733-6547245:-1:exon
so has part: feature:6543721-6543962:-1:exon
so has part: feature:6540033-6541135:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6546733-6547245:-1:exon

position:6546733:-1
position: 6546733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6543721-6543962:-1:exon

position:6543721:-1
position: 6543721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6543962:-1
position: 6543962
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6540033-6541135:-1:exon

position:6541135:-1
position: 6541135
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H3orf38
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: C21H3orf38
product: chromosome 21 C3orf38 homolog, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_003735367.5
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(6540033..6541138,6543721..6543962,6546733..6547237))
location: region:6540033-6547237:-1
so has part: feature:6546733-6547237:-1:exon
so has part: feature:6543721-6543962:-1:exon
so has part: feature:6540033-6541138:-1:exon

position:6547237:-1
position: 6547237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6546733-6547237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6543721-6543962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6540033-6541138:-1:exon

position:6541138:-1
position: 6541138
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

C21H3orf38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: C21H3orf38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf38 homolog isoform X2
translation: MSRLSSPEMEGCRKLLGLLDNDEIMALCDTVTNRLVQPESRQDAVHAILVYSQSAEELLRRRKVHRDIIFKYLATQGIIIPPATEKHSLIQHAKDYWQKQSQLKLKEIPEPLTKTEDMQFFRQVKEDKKAENVDFHRLGEEFCHWFFGLLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYNTSEQNVMDYHGAEIVSLRLLSLVKEEFLFLSPNLDSRGLKCASSPHGLVMVGVAGTVHRGNTCLGIFEQIFGLIRCPFVENTWKIKFINLRIVGESSLVPGTLPKPAVTFEQSDLESFYNVITLCGTNEVRHNVKQALESGTDQA
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(6540527..6541135,6543721..6543962,6546733..6546859))
location: region:6540527-6546859:-1
so has part: feature:6546733-6546859:-1:exon
so has part: feature:6543721-6543962:-1:exon
so has part: feature:6540527-6541135:-1:exon

XP_008984700.1
type: Protein
SIO_000068: ncbiprotein

position:6540527:-1
position: 6540527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6546859:-1
position: 6546859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6546733-6546859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6543721-6543962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6540527-6541135:-1:exon

C21H3orf38
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: C21H3orf38
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein C3orf38 homolog isoform X1
translation: MSRLSSPEMEGCRKLLGLLDNDEIMALCDTVTNRLVQPESRQDAVHAILVYSQSAEELLRRRKVHRDIIFKYLATQGIIIPPATEKHSLIQHAKDYWQKQSQLKLKEIPEPLTKTEDMQFFRQQVKEDKKAENVDFHRLGEEFCHWFFGLLNSQNPFLGPPQDEWGPQHFWHDVKLRFYYNTSEQNVMDYHGAEIVSLRLLSLVKEEFLFLSPNLDSRGLKCASSPHGLVMVGVAGTVHRGNTCLGIFEQIFGLIRCPFVENTWKIKFINLRIVGESSLVPGTLPKPAVTFEQSDLESFYNVITLCGTNEVRHNVKQALESGTDQA
SIO_010081: C21H3orf38
subclass of: SO_0000673
so part of: C21H3orf38
location: complement(join(6540527..6541138,6543721..6543962,6546733..6546859))
location: region:6540527-6546859:-1
so has part: feature:6546733-6546859:-1:exon
so has part: feature:6543721-6543962:-1:exon
so has part: feature:6540527-6541138:-1:exon

XP_003735415.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6546733-6546859:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6543721-6543962:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6540527-6541138:-1:exon

LOC118149916
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149916
note: uncharacterized LOC118149916; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6547216..6588627
location: region:6547216-6588627:1
so has part: feature:6547216-6588627:1:exon
subclass of: SO_0000011

118149916
type: Gene
SIO_000068: ncbigene

position:6547216:1
position: 6547216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6588627:1
position: 6588627
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6547216-6588627:1:exon

LOC118149916
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149916
product: uncharacterized LOC118149916
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST
transcript id: XR_004737671.2
SIO_010081: LOC118149916
subclass of: SO_0000673
so part of: LOC118149916
location: join(6547216..6547349,6555930..6556036,6573976..6574097,6580813..6580876,6584360..6588627)
location: region:6547216-6588627:1
so has part: feature:6547216-6547349:1:exon
so has part: feature:6555930-6556036:1:exon
so has part: feature:6573976-6574097:1:exon
so has part: feature:6580813-6580876:1:exon
so has part: feature:6584360-6588627:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6547216-6547349:1:exon

position:6547349:1
position: 6547349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6555930-6556036:1:exon

position:6555930:1
position: 6555930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6556036:1
position: 6556036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6573976-6574097:1:exon

position:6573976:1
position: 6573976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6574097:1
position: 6574097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6580813-6580876:1:exon

position:6580813:1
position: 6580813
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6580876:1
position: 6580876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6584360-6588627:1:exon

position:6584360:1
position: 6584360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ZNF654
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: ZNF654
note: zinc finger protein 654; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6552423..6642775)
location: region:6552423-6642775:-1
so has part: feature:6552423-6642775:-1:exon
subclass of: SO_0000010

103789577
type: Gene
SIO_000068: ncbigene

position:6552423:-1
position: 6552423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6642775:-1
position: 6642775
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6552423-6642775:-1:exon

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ZNF654
product: zinc finger protein 654, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986450.4
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(6552423..6555401,6555958..6558286,6561493..6561634,6567199..6567338,6567975..6568177,6570690..6570825,6585336..6585417,6615698..6615843,6642469..6642775))
location: region:6552423-6642775:-1
so has part: feature:6642469-6642775:-1:exon
so has part: feature:6615698-6615843:-1:exon
so has part: feature:6585336-6585417:-1:exon
so has part: feature:6570690-6570825:-1:exon
so has part: feature:6567975-6568177:-1:exon
so has part: feature:6567199-6567338:-1:exon
so has part: feature:6561493-6561634:-1:exon
so has part: feature:6555958-6558286:-1:exon
so has part: feature:6552423-6555401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6642469-6642775:-1:exon

position:6642469:-1
position: 6642469
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6615698-6615843:-1:exon

position:6615698:-1
position: 6615698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6615843:-1
position: 6615843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6585336-6585417:-1:exon

position:6585336:-1
position: 6585336
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6585417:-1
position: 6585417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:6570690-6570825:-1:exon

position:6570690:-1
position: 6570690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6570825:-1
position: 6570825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:6567975-6568177:-1:exon

position:6567975:-1
position: 6567975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6568177:-1
position: 6568177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:6567199-6567338:-1:exon

position:6567199:-1
position: 6567199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6567338:-1
position: 6567338
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:6561493-6561634:-1:exon

position:6561493:-1
position: 6561493
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6561634:-1
position: 6561634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:6555958-6558286:-1:exon

position:6555958:-1
position: 6555958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6558286:-1
position: 6558286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:6552423-6555401:-1:exon

position:6555401:-1
position: 6555401
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ZNF654
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ZNF654
product: zinc finger protein 654, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249046.1
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(6552423..6555401,6555958..6558286,6561493..6561634,6567199..6567338,6570690..6570825))
location: region:6552423-6570825:-1
so has part: feature:6570690-6570825:-1:exon
so has part: feature:6567199-6567338:-1:exon
so has part: feature:6561493-6561634:-1:exon
so has part: feature:6555958-6558286:-1:exon
so has part: feature:6552423-6555401:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6570690-6570825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6567199-6567338:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6561493-6561634:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6555958-6558286:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6552423-6555401:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X1
translation: MAEEESDQEAERLGEELVAIVESPLGPVGLRAAGDGRGGAGSGSCGAGVGISSRDYCRRFCQVVEDYAGRWQVPLPQLQVLQTALCCFTTASASFPDECEHVQYVLSSLAVSFFELLLFFGRDEFYEEPLKDILGSFQECQNHLRRYGNVNLELVTRIIRDGGPWEDPVLQAVLKAQPASQEIVNKYLSSENPLFFELRARYLIACERIPEAMALIKSCINHPEISKDLYFHQALFTCLFMSPVEDQLFREHLLKTDCKSGIDIICNTEKEGKTMLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSHPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPKTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYRTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLSESTLENNAGNLKRTVEQQGLDEGFDSLTDQSTGETDPDDASGVLPKGQINTKKNLTALNTSRVDHNVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQDDQEVTALEEINCSSISFENGNSDRKDLAVETLTSSSDGNKEVTPEHVAELIEIPISVPEDVIENGSPDTSLNNVLKPLPECGDDYEEEEDEEGDYEEDDYDLNQETSIIHKINGIVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKYCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHIKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVHTDSDPIHQEKDSSSNEKQTISLPVSTSKSRKDSTEPKTCIESMEKKTDSLVQNGNERSDDTVSNISLIDQKMPDIEPNSENNCSSSDLVNGHSEVEQTPLVSSNPALKMDTNRIRTENGSVLPSVVPQEHNTLPVSQAPSKPNLTSEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVYKKSVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESA
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(6555394..6555401,6555958..6558286,6561493..6561634,6567199..6567338,6567975..6568177,6570690..6570825,6585336..6585417,6615698..6615843,6642469..6642654))
location: region:6555394-6642654:-1
so has part: feature:6642469-6642654:-1:exon
so has part: feature:6615698-6615843:-1:exon
so has part: feature:6585336-6585417:-1:exon
so has part: feature:6570690-6570825:-1:exon
so has part: feature:6567975-6568177:-1:exon
so has part: feature:6567199-6567338:-1:exon
so has part: feature:6561493-6561634:-1:exon
so has part: feature:6555958-6558286:-1:exon
so has part: feature:6555394-6555401:-1:exon

XP_008984698.3
type: Protein
SIO_000068: ncbiprotein

position:6555394:-1
position: 6555394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6642654:-1
position: 6642654
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6642469-6642654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6615698-6615843:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6585336-6585417:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6570690-6570825:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:6567975-6568177:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:6567199-6567338:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:6561493-6561634:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:6555958-6558286:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:6555394-6555401:-1:exon

ZNF654
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ZNF654
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 654 isoform X2
translation: MLALQLCESFLIPQLQNGDMYCIWELIFIWSKLQLKSHPSKQVFVDQCYQLLRTATNVRVIFPFMKIIKDEVEEEGLQICVEICGCALQLDLHDDPKTKCLIYKTIAHFLPNDLEILRICALSIFFLERSLEAYRTVEELYKRPDEEYNEGTSSVQNRVRFELLPILKKGLFFDPEFWNFVMIKKNCVALLSDKSAVRFLSESTLENNAGNLKRTVEQQGLDEGFDSLTDQSTGETDPDDASGVLPKGQINTKKNLTALNTSRVDHNVPRHRCMLCNKEFLGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQDDQEVTALEEINCSSISFENGNSDRKDLAVETLTSSSDGNKEVTPEHVAELIEIPISVPEDVIENGSPDTSLNNVLKPLPECGDDYEEEEDEEGDYEEDDYDLNQETSIIHKINGIVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKYCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHIKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVHTDSDPIHQEKDSSSNEKQTISLPVSTSKSRKDSTEPKTCIESMEKKTDSLVQNGNERSDDTVSNISLIDQKMPDIEPNSENNCSSSDLVNGHSEVEQTPLVSSNPALKMDTNRIRTENGSVLPSVVPQEHNTLPVSQAPSKPNLTSEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVYKKSVKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESA
SIO_010081: ZNF654
subclass of: SO_0000673
so part of: ZNF654
location: complement(join(6555394..6555401,6555958..6558286,6561493..6561634,6567199..6567269))
location: region:6555394-6567269:-1
so has part: feature:6567199-6567269:-1:exon
so has part: feature:6561493-6561634:-1:exon
so has part: feature:6555958-6558286:-1:exon
so has part: feature:6555394-6555401:-1:exon

XP_054105021.1
type: Protein
SIO_000068: ncbiprotein

position:6567269:-1
position: 6567269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6567199-6567269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6561493-6561634:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6555958-6558286:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6555394-6555401:-1:exon

CGGBP1
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: CGGBP1
note: CGG triplet repeat binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6643764..6649835
location: region:6643764-6649835:1
so has part: feature:6643764-6649835:1:exon
subclass of: SO_0000010

100402209
type: Gene
SIO_000068: ncbigene

position:6643764:1
position: 6643764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6649835:1
position: 6649835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6643764-6649835:1:exon

CGGBP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CGGBP1
product: CGG triplet repeat binding protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986447.3
SIO_010081: CGGBP1
subclass of: SO_0000673
so part of: CGGBP1
location: join(6643764..6643957,6645876..6649835)
location: region:6643764-6649835:1
so has part: feature:6643764-6643957:1:exon
so has part: feature:6645876-6649835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6643764-6643957:1:exon

position:6643957:1
position: 6643957
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6645876-6649835:1:exon

position:6645876:1
position: 6645876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CGGBP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CGGBP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein CGGBP1
translation: MTSWHHRENRVQAQKLFPHHHLLKN
SIO_010081: CGGBP1
subclass of: SO_0000673
so part of: CGGBP1
location: 6643764..6643841
location: region:6643764-6643841:1
so has part: feature:6643764-6643841:1:exon

XP_008984695.2
type: Protein
SIO_000068: ncbiprotein

position:6643841:1
position: 6643841
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6643764-6643841:1:exon

LOC128928030
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128928030
note: CGG triplet repeat-binding protein 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6645899..6649835
location: region:6645899-6649835:1
so has part: feature:6645899-6649835:1:exon
subclass of: SO_0000010

128928030
type: Gene
SIO_000068: ncbigene

position:6645899:1
position: 6645899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645899-6649835:1:exon

LOC128928030
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC128928030
product: CGG triplet repeat-binding protein 1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249047.1
SIO_010081: LOC128928030
subclass of: SO_0000673
so part of: LOC128928030
location: 6645899..6649835
location: region:6645899-6649835:1
so has part: feature:6645899-6649835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6645899-6649835:1:exon

LOC128928030
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC128928030
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: CGG triplet repeat-binding protein 1
translation: MERFVVTAPPARNRSKTALYVTPLDRVTEFGGELHEDGGKLFCTSCNVVLNHVRKSAISDHLKSKTHTKRKAEFEEQNVRKKQRPLTASLQCNSTAQTEKVSVIQDFVKMCLEANIPLEKADHPAVRAFLSRHVKNGGSIPKSDQLRRAYLPDGYENENQLLNSQDC
SIO_010081: LOC128928030
subclass of: SO_0000673
so part of: LOC128928030
location: 6645899..6646402
location: region:6645899-6646402:1
so has part: feature:6645899-6646402:1:exon

XP_054105022.1
type: Protein
SIO_000068: ncbiprotein

position:6646402:1
position: 6646402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6645899-6646402:1:exon

LOC118149865
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149865
note: uncharacterized LOC118149865; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6703531..6711509
location: region:6703531-6711509:1
so has part: feature:6703531-6711509:1:exon
subclass of: SO_0000011

118149865
type: Gene
SIO_000068: ncbigene

position:6703531:1
position: 6703531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6711509:1
position: 6711509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6703531-6711509:1:exon

LOC118149865
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149865
product: uncharacterized LOC118149865
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_004737588.2
SIO_010081: LOC118149865
subclass of: SO_0000673
so part of: LOC118149865
location: join(6703531..6703825,6706709..6711509)
location: region:6703531-6711509:1
so has part: feature:6703531-6703825:1:exon
so has part: feature:6706709-6711509:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6703531-6703825:1:exon

position:6703825:1
position: 6703825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6706709-6711509:1:exon

position:6706709:1
position: 6706709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HTR1F
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: HTR1F
note: 5-hydroxytryptamine receptor 1F; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(6709232..6856477)
location: region:6709232-6856477:-1
so has part: feature:6709232-6856477:-1:exon
subclass of: SO_0000010

100406194
type: Gene
SIO_000068: ncbigene

position:6709232:-1
position: 6709232
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6856477:-1
position: 6856477
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6709232-6856477:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_017967211.4
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(6709232..6713873,6855958..6856477))
location: region:6709232-6856477:-1
so has part: feature:6855958-6856477:-1:exon
so has part: feature:6709232-6713873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6855958-6856477:-1:exon

position:6855958:-1
position: 6855958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6709232-6713873:-1:exon

position:6713873:-1
position: 6713873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282862.2
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(6709232..6713873,6826904..6827017,6855958..6856477))
location: region:6709232-6856477:-1
so has part: feature:6855958-6856477:-1:exon
so has part: feature:6826904-6827017:-1:exon
so has part: feature:6709232-6713873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6855958-6856477:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6826904-6827017:-1:exon

position:6826904:-1
position: 6826904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6827017:-1
position: 6827017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6709232-6713873:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282863.2
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(6709232..6713873,6826904..6827017,6855485..6856477))
location: region:6709232-6856477:-1
so has part: feature:6855485-6856477:-1:exon
so has part: feature:6826904-6827017:-1:exon
so has part: feature:6709232-6713873:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6855485-6856477:-1:exon

position:6855485:-1
position: 6855485
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:6826904-6827017:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:6709232-6713873:-1:exon

HTR1F
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: HTR1F
product: 5-hydroxytryptamine receptor 1F, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282861.2
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(join(6709232..6713873,6826904..6827017,6830110..6830270,6855485..6855904))
location: region:6709232-6855904:-1
so has part: feature:6855485-6855904:-1:exon
so has part: feature:6830110-6830270:-1:exon
so has part: feature:6826904-6827017:-1:exon
so has part: feature:6709232-6713873:-1:exon

position:6855904:-1
position: 6855904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6855485-6855904:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:6830110-6830270:-1:exon

position:6830110:-1
position: 6830110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6830270:-1
position: 6830270
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:6826904-6827017:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:6709232-6713873:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPRHAGIMITVVWIISVFISMPPLFWRHQGTSRDDECVIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHRRQASRIAKEEVNGQVLLESGEKSTKSVSTPYVLEKSLSNPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNICEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(6712731..6713831)
location: region:6712731-6713831:-1
so has part: feature:6712731-6713831:-1:exon

XP_035138753.2
type: Protein
SIO_000068: ncbiprotein

position:6712731:-1
position: 6712731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6713831:-1
position: 6713831
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6712731-6713831:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPRHAGIMITVVWIISVFISMPPLFWRHQGTSRDDECVIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHRRQASRIAKEEVNGQVLLESGEKSTKSVSTPYVLEKSLSNPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNICEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(6712731..6713831)
location: region:6712731-6713831:-1
so has part: feature:6712731-6713831:-1:exon

XP_035138754.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6712731-6713831:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPRHAGIMITVVWIISVFISMPPLFWRHQGTSRDDECVIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHRRQASRIAKEEVNGQVLLESGEKSTKSVSTPYVLEKSLSNPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNICEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(6712731..6713831)
location: region:6712731-6713831:-1
so has part: feature:6712731-6713831:-1:exon

XP_035138752.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6712731-6713831:-1:exon

HTR1F
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: HTR1F
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5-hydroxytryptamine receptor 1F
translation: MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKRTPRHAGIMITVVWIISVFISMPPLFWRHQGTSRDDECVIKHDHIVSTIYSTFGAFYIPLALILILYYKIYRAAKTLYHRRQASRIAKEEVNGQVLLESGEKSTKSVSTPYVLEKSLSNPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGTRERKAATTLGLILGAFVICWLPFFVKELVVNICEKCKISEEMSNFLTWLGYLNSLINPLIYTIFNEDFKKAFQKLVRCRC
SIO_010081: HTR1F
subclass of: SO_0000673
so part of: HTR1F
location: complement(6712731..6713831)
location: region:6712731-6713831:-1
so has part: feature:6712731-6713831:-1:exon

XP_017822700.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:6712731-6713831:-1:exon

LOC118150008
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150008
note: U6atac minor spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(6761236..6761361)
location: region:6761236-6761361:-1
so has part: feature:6761236-6761361:-1:exon
subclass of: SO_0000623

118150008
type: Gene
SIO_000068: ncbigene

position:6761236:-1
position: 6761236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:6761361:-1
position: 6761361
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6761236-6761361:-1:exon

LOC118150008
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150008
product: U6atac minor spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00619
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737777.1
SIO_010081: LOC118150008
subclass of: SO_0000673
so part of: LOC118150008
location: complement(6761236..6761361)
location: region:6761236-6761361:-1
so has part: feature:6761236-6761361:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6761236-6761361:-1:exon

LOC118150061
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150061
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 6880082..6880184
location: region:6880082-6880184:1
so has part: feature:6880082-6880184:1:exon
subclass of: SO_0000623

118150061
type: Gene
SIO_000068: ncbigene

position:6880082:1
position: 6880082
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6880184:1
position: 6880184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6880082-6880184:1:exon

LOC118150061
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150061
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737820.1
SIO_010081: LOC118150061
subclass of: SO_0000673
so part of: LOC118150061
location: 6880082..6880184
location: region:6880082-6880184:1
so has part: feature:6880082-6880184:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6880082-6880184:1:exon

LOC100406923
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100406923
note: uncharacterized protein C4orf3 homolog; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 6912610..6913098
location: region:6912610-6913098:1
so has part: feature:6912610-6913098:1:exon
subclass of: SO_0000010

100406923
type: Gene
SIO_000068: ncbigene

position:6912610:1
position: 6912610
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6913098:1
position: 6913098
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6912610-6913098:1:exon

LOC100406923
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC100406923
product: uncharacterized protein C4orf3 homolog
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986456.2
SIO_010081: LOC100406923
subclass of: SO_0000673
so part of: LOC100406923
location: 6912610..6913098
location: region:6912610-6913098:1
so has part: feature:6912610-6913098:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:6912610-6913098:1:exon

LOC100406923
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC100406923
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 2 bases at 2 genomic stop codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:6912673..6912675,aa:OTHER)
transl except: (pos:6912679..6912681,aa:OTHER)
product: LOW QUALITY PROTEIN: uncharacterized protein C4orf3 homolog
translation: MEVDVPGLDGRNGACELRGLRXEXRWNLVVWPQSGANGLHKHSYWLDLWLFILFDVVVFLFLYFFAMTRFMTSKLRSWFLNEF
SIO_010081: LOC100406923
subclass of: SO_0000673
so part of: LOC100406923
location: 6912610..6912861
location: region:6912610-6912861:1
so has part: feature:6912610-6912861:1:exon

XP_008984704.2
type: Protein
SIO_000068: ncbiprotein

position:6912861:1
position: 6912861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:6912610-6912861:1:exon

LOC118149899
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149899
note: uncharacterized LOC118149899; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7056640..7079527
location: region:7056640-7079527:1
so has part: feature:7056640-7079527:1:exon
subclass of: SO_0000011

118149899
type: Gene
SIO_000068: ncbigene

position:7056640:1
position: 7056640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7079527:1
position: 7079527
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7056640-7079527:1:exon

LOC118149899
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149899
product: uncharacterized LOC118149899
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737648.2
SIO_010081: LOC118149899
subclass of: SO_0000673
so part of: LOC118149899
location: join(7056640..7056933,7065351..7065459,7066249..7079527)
location: region:7056640-7079527:1
so has part: feature:7056640-7056933:1:exon
so has part: feature:7065351-7065459:1:exon
so has part: feature:7066249-7079527:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7056640-7056933:1:exon

position:7056933:1
position: 7056933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7065351-7065459:1:exon

position:7065351:1
position: 7065351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7065459:1
position: 7065459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7066249-7079527:1:exon

position:7066249:1
position: 7066249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118150019
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150019
note: U1 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7199780..7199943
location: region:7199780-7199943:1
so has part: feature:7199780-7199943:1:exon
subclass of: SO_0000623

118150019
type: Gene
SIO_000068: ncbigene

position:7199780:1
position: 7199780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7199943:1
position: 7199943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7199780-7199943:1:exon

LOC118150019
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150019
product: U1 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00003
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737787.1
SIO_010081: LOC118150019
subclass of: SO_0000673
so part of: LOC118150019
location: 7199780..7199943
location: region:7199780-7199943:1
so has part: feature:7199780-7199943:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7199780-7199943:1:exon

POU1F1
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: POU1F1
note: POU class 1 homeobox 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7231983..7249530
location: region:7231983-7249530:1
so has part: feature:7231983-7249530:1:exon
subclass of: SO_0000010

100407285
type: Gene
SIO_000068: ncbigene

position:7231983:1
position: 7231983
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7249530:1
position: 7249530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7231983-7249530:1:exon

POU1F1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: POU1F1
product: POU class 1 homeobox 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 4 Proteins
transcript id: XM_054248936.1
SIO_010081: POU1F1
subclass of: SO_0000673
so part of: POU1F1
location: join(7231983..7232124,7235092..7235238,7243772..7243996,7246031..7246195,7246929..7246989,7248194..7249530)
location: region:7231983-7249530:1
so has part: feature:7231983-7232124:1:exon
so has part: feature:7235092-7235238:1:exon
so has part: feature:7243772-7243996:1:exon
so has part: feature:7246031-7246195:1:exon
so has part: feature:7246929-7246989:1:exon
so has part: feature:7248194-7249530:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7231983-7232124:1:exon

position:7232124:1
position: 7232124
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7235092-7235238:1:exon

position:7235092:1
position: 7235092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7235238:1
position: 7235238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7243772-7243996:1:exon

position:7243772:1
position: 7243772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7243996:1
position: 7243996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7246031-7246195:1:exon

position:7246031:1
position: 7246031
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7246195:1
position: 7246195
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7246929-7246989:1:exon

position:7246929:1
position: 7246929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7246989:1
position: 7246989
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7248194-7249530:1:exon

position:7248194:1
position: 7248194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

POU1F1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: POU1F1
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:7235148..7235150,aa:OTHER)
product: LOW QUALITY PROTEIN: pituitary-specific positive transcription factor 1
translation: MSCQSFPSADTFIPLNSDASATLPLIMHHSAAECLPVSNHATNVMPTVPSILSLTQTPECLRPHFSXQHWETATGLHYSVPSCHYGNQPSAYGVMAGSLTPCLYKFPDHTLSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPVDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVHGSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEKVGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVKTSLNQSLFSISKEHLECR
SIO_010081: POU1F1
subclass of: SO_0000673
so part of: POU1F1
location: join(7231983..7232124,7235092..7235238,7243772..7243996,7246031..7246195,7246929..7246989,7248194..7248404)
location: region:7231983-7248404:1
so has part: feature:7231983-7232124:1:exon
so has part: feature:7235092-7235238:1:exon
so has part: feature:7243772-7243996:1:exon
so has part: feature:7246031-7246195:1:exon
so has part: feature:7246929-7246989:1:exon
so has part: feature:7248194-7248404:1:exon

XP_054104911.1
type: Protein
SIO_000068: ncbiprotein

position:7248404:1
position: 7248404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7231983-7232124:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7235092-7235238:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7243772-7243996:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7246031-7246195:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7246929-7246989:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7248194-7248404:1:exon

CHMP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: CHMP2B
note: charged multivesicular body protein 2B; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7252788..7280459)
location: region:7252788-7280459:-1
so has part: feature:7252788-7280459:-1:exon
subclass of: SO_0000010

100408012
type: Gene
SIO_000068: ncbigene

position:7252788:-1
position: 7252788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280459:-1
position: 7280459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7252788-7280459:-1:exon

CHMP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CHMP2B
product: charged multivesicular body protein 2B
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282867.2
SIO_010081: CHMP2B
subclass of: SO_0000673
so part of: CHMP2B
location: complement(join(7252788..7254459,7254656..7254762,7258350..7258452,7263383..7263577,7266013..7266104,7280177..7280459))
location: region:7252788-7280459:-1
so has part: feature:7280177-7280459:-1:exon
so has part: feature:7266013-7266104:-1:exon
so has part: feature:7263383-7263577:-1:exon
so has part: feature:7258350-7258452:-1:exon
so has part: feature:7254656-7254762:-1:exon
so has part: feature:7252788-7254459:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7280177-7280459:-1:exon

position:7280177:-1
position: 7280177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7266013-7266104:-1:exon

position:7266013:-1
position: 7266013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7266104:-1
position: 7266104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7263383-7263577:-1:exon

position:7263383:-1
position: 7263383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7263577:-1
position: 7263577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7258350-7258452:-1:exon

position:7258350:-1
position: 7258350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7258452:-1
position: 7258452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:7254656-7254762:-1:exon

position:7254656:-1
position: 7254656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7254762:-1
position: 7254762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:7252788-7254459:-1:exon

position:7254459:-1
position: 7254459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CHMP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CHMP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: charged multivesicular body protein 2b
translation: MACLFKKKTVDDVIKEQNRELRGTQRAIIRDRAALEKQEKQLELEIKKMAKIGNKDACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMKMAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAGSLPSASTSKATISDEEIERQLKALGVD
SIO_010081: CHMP2B
subclass of: SO_0000673
so part of: CHMP2B
location: complement(join(7254349..7254459,7254656..7254762,7258350..7258452,7263383..7263577,7266013..7266104,7280177..7280210))
location: region:7254349-7280210:-1
so has part: feature:7280177-7280210:-1:exon
so has part: feature:7266013-7266104:-1:exon
so has part: feature:7263383-7263577:-1:exon
so has part: feature:7258350-7258452:-1:exon
so has part: feature:7254656-7254762:-1:exon
so has part: feature:7254349-7254459:-1:exon

XP_035138758.1
type: Protein
SIO_000068: ncbiprotein

position:7254349:-1
position: 7254349
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7280210:-1
position: 7280210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7280177-7280210:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7266013-7266104:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7263383-7263577:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7258350-7258452:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:7254656-7254762:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:7254349-7254459:-1:exon

LOC118149904
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149904
note: uncharacterized LOC118149904; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7492041..7498903)
location: region:7492041-7498903:-1
so has part: feature:7492041-7498903:-1:exon
subclass of: SO_0000011

118149904
type: Gene
SIO_000068: ncbigene

position:7492041:-1
position: 7492041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7498903:-1
position: 7498903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7492041-7498903:-1:exon

LOC118149904
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149904
product: uncharacterized LOC118149904
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA
transcript id: XR_004737655.1
SIO_010081: LOC118149904
subclass of: SO_0000673
so part of: LOC118149904
location: complement(join(7492041..7492156,7492771..7492865,7498745..7498903))
location: region:7492041-7498903:-1
so has part: feature:7498745-7498903:-1:exon
so has part: feature:7492771-7492865:-1:exon
so has part: feature:7492041-7492156:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7498745-7498903:-1:exon

position:7498745:-1
position: 7498745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7492771-7492865:-1:exon

position:7492771:-1
position: 7492771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:7492865:-1
position: 7492865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7492041-7492156:-1:exon

position:7492156:-1
position: 7492156
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

VGLL3
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: VGLL3
note: vestigial like family member 3; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 7504073..7553468
location: region:7504073-7553468:1
so has part: feature:7504073-7553468:1:exon
subclass of: SO_0000010

100409464
type: Gene
SIO_000068: ncbigene

position:7504073:1
position: 7504073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7553468:1
position: 7553468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7504073-7553468:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: VGLL3
product: vestigial like family member 3, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282927.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504073..7504759,7516181..7516463,7525877..7526404,7547095..7553468)
location: region:7504073-7553468:1
so has part: feature:7504073-7504759:1:exon
so has part: feature:7516181-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7553468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7504073-7504759:1:exon

position:7504759:1
position: 7504759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7516181-7516463:1:exon

position:7516181:1
position: 7516181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7516463:1
position: 7516463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526404:1:exon

position:7525877:1
position: 7525877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7526404:1
position: 7526404
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7553468:1:exon

position:7547095:1
position: 7547095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: VGLL3
product: vestigial like family member 3, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282929.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504137..7504759,7516181..7516463,7525877..7526115,7547095..7553468)
location: region:7504137-7553468:1
so has part: feature:7504137-7504759:1:exon
so has part: feature:7516181-7516463:1:exon
so has part: feature:7525877-7526115:1:exon
so has part: feature:7547095-7553468:1:exon

position:7504137:1
position: 7504137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7504137-7504759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7516181-7516463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526115:1:exon

position:7526115:1
position: 7526115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7553468:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: VGLL3
product: vestigial like family member 3, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282928.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504137..7504759,7516184..7516463,7525877..7526404,7547095..7553468)
location: region:7504137-7553468:1
so has part: feature:7504137-7504759:1:exon
so has part: feature:7516184-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7553468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7504137-7504759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7516184-7516463:1:exon

position:7516184:1
position: 7516184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7553468:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: VGLL3
product: vestigial like family member 3, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282930.2
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504137..7504759,7516346..7516463,7525877..7526404,7547095..7553468)
location: region:7504137-7553468:1
so has part: feature:7504137-7504759:1:exon
so has part: feature:7516346-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7553468:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7504137-7504759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7516346-7516463:1:exon

position:7516346:1
position: 7516346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7553468:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X3
translation: MSCAEVMYHPQPYGASQYLPNPMAATTCPTACYQPAPQPGQQKKLAVFSKMQDSLEVTLPSKQEEEDEDEEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQAIALHPESAISKSKMGLTPLWRDSSALSSQRNSFSTSFWTSSYQPQPAPCLGGVHPDFQVAGPPGTFSAADPSPWPGHSLHQTGPAPPPPASESWPYPLTSQVYSTKTRIRNHHGTETHHLCELGCSMNPRVHWEKMLSGFSTQQKGMKDMEGEDSAMRLTLVFGVSLRKQGGS
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504634..7504759,7516181..7516463,7525877..7526115,7547095..7547313)
location: region:7504634-7547313:1
so has part: feature:7504634-7504759:1:exon
so has part: feature:7516181-7516463:1:exon
so has part: feature:7525877-7526115:1:exon
so has part: feature:7547095-7547313:1:exon

XP_035138820.1
type: Protein
SIO_000068: ncbiprotein

position:7504634:1
position: 7504634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7547313:1
position: 7547313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7504634-7504759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7516181-7516463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526115:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7547313:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X1
translation: MSCAEVMYHPQPYGASQYLPNPMAATTCPTACYQPAPQPGQQKKLAVFSKMQDSLEVTLPSKQEEEDEDEEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQAIALHPESAISKSKMGLTPLWRDSSALSSQRNSFSTSFWTSSYQPQPAPCLGGVHPDFQVAGPPGTFSAADPSPWPGHSLHQTGPAPPPPASESWPYPLTSQVSPSYSHMHDVYMRHHAHMHHRHHHHHHHHHHPPAGSALDPSYGPLLMPSVHAARIPAPQCDITKTEPPTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKNKESPWY
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504634..7504759,7516181..7516463,7525877..7526404,7547095..7547138)
location: region:7504634-7547138:1
so has part: feature:7504634-7504759:1:exon
so has part: feature:7516181-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7547138:1:exon

XP_035138818.1
type: Protein
SIO_000068: ncbiprotein

position:7547138:1
position: 7547138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7504634-7504759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7516181-7516463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7547138:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X2
translation: MSCAEVMYHPQPYGASQYLPNPMAATTCPTACYQPAPQPGQQKLAVFSKMQDSLEVTLPSKQEEEDEDEEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQAIALHPESAISKSKMGLTPLWRDSSALSSQRNSFSTSFWTSSYQPQPAPCLGGVHPDFQVAGPPGTFSAADPSPWPGHSLHQTGPAPPPPASESWPYPLTSQVSPSYSHMHDVYMRHHAHMHHRHHHHHHHHHHPPAGSALDPSYGPLLMPSVHAARIPAPQCDITKTEPPTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKNKESPWY
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504634..7504759,7516184..7516463,7525877..7526404,7547095..7547138)
location: region:7504634-7547138:1
so has part: feature:7504634-7504759:1:exon
so has part: feature:7516184-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7547138:1:exon

XP_035138819.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7504634-7504759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7516184-7516463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7547138:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X5
translation: MSCAEVMYHPQPYGASQYLPNPMAATTCPTACYQPAPQPGQQGDIGSVVDEHFSRALGQAIALHPESAISKSKMGLTPLWRDSSALSSQRNSFSTSFWTSSYQPQPAPCLGGVHPDFQVAGPPGTFSAADPSPWPGHSLHQTGPAPPPPASESWPYPLTSQVSPSYSHMHDVYMRHHAHMHHRHHHHHHHHHHPPAGSALDPSYGPLLMPSVHAARIPAPQCDITKTEPPTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKNKESPWY
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504634..7504759,7516346..7516463,7525877..7526404,7547095..7547138)
location: region:7504634-7547138:1
so has part: feature:7504634-7504759:1:exon
so has part: feature:7516346-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7547138:1:exon

XP_035138821.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:7504634-7504759:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7516346-7516463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7547138:1:exon

VGLL3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: VGLL3
product: vestigial like family member 3, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248942.1
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7504844..7505096,7516181..7516463,7525877..7526404,7547095..7553468)
location: region:7504844-7553468:1
so has part: feature:7504844-7505096:1:exon
so has part: feature:7516181-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7553468:1:exon

position:7504844:1
position: 7504844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7504844-7505096:1:exon

position:7505096:1
position: 7505096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:7516181-7516463:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7525877-7526404:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:7547095-7553468:1:exon

VGLL3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: VGLL3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transcription cofactor vestigial-like protein 3 isoform X4
translation: MQDSLEVTLPSKQEEEDEDEEEEEEEKDQPAEMEYLNSRCVLFTYFQGDIGSVVDEHFSRALGQAIALHPESAISKSKMGLTPLWRDSSALSSQRNSFSTSFWTSSYQPQPAPCLGGVHPDFQVAGPPGTFSAADPSPWPGHSLHQTGPAPPPPASESWPYPLTSQVSPSYSHMHDVYMRHHAHMHHRHHHHHHHHHHPPAGSALDPSYGPLLMPSVHAARIPAPQCDITKTEPPTVTTATSAWAGAFHGTVDIVPSVGFDTGLQHQDKNKESPWY
SIO_010081: VGLL3
subclass of: SO_0000673
so part of: VGLL3
location: join(7516205..7516463,7525877..7526404,7547095..7547138)
location: region:7516205-7547138:1
so has part: feature:7516205-7516463:1:exon
so has part: feature:7525877-7526404:1:exon
so has part: feature:7547095-7547138:1:exon

XP_054104917.1
type: Protein
SIO_000068: ncbiprotein

position:7516205:1
position: 7516205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7516205-7516463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:7525877-7526404:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:7547095-7547138:1:exon

LOC100897013
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100897013
note: uncharacterized LOC100897013; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7554045..7556094
location: region:7554045-7556094:1
so has part: feature:7554045-7556094:1:exon

100897013
type: Gene
SIO_000068: ncbigene

position:7554045:1
position: 7554045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7556094:1
position: 7556094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7554045-7556094:1:exon

LOC100897013
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100897013
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC100897013
subclass of: SO_0000673
so part of: LOC100897013
location: 7554045..7554062
location: region:7554045-7554062:1
so has part: feature:7554045-7554062:1:exon

position:7554062:1
position: 7554062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7554045-7554062:1:exon

LOC100897013
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100897013
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC100897013
subclass of: SO_0000673
so part of: LOC100897013
location: 7554418..7554584
location: region:7554418-7554584:1
so has part: feature:7554418-7554584:1:exon

position:7554418:1
position: 7554418
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7554584:1
position: 7554584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7554418-7554584:1:exon

LOC100897013
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100897013
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
SIO_010081: LOC100897013
subclass of: SO_0000673
so part of: LOC100897013
location: 7554890..7556094
location: region:7554890-7556094:1
so has part: feature:7554890-7556094:1:exon

position:7554890:1
position: 7554890
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7554890-7556094:1:exon

LOC118150040
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150040
note: U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 7646075..7646213
location: region:7646075-7646213:1
so has part: feature:7646075-7646213:1:exon
subclass of: SO_0000623

118150040
type: Gene
SIO_000068: ncbigene

position:7646075:1
position: 7646075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7646213:1
position: 7646213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7646075-7646213:1:exon

LOC118150040
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150040
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737801.1
SIO_010081: LOC118150040
subclass of: SO_0000673
so part of: LOC118150040
location: 7646075..7646213
location: region:7646075-7646213:1
so has part: feature:7646075-7646213:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7646075-7646213:1:exon

LOC100409105
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100409105
note: phosphoglycerate kinase 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7707743..7709438
location: region:7707743-7709438:1
so has part: feature:7707743-7709438:1:exon

100409105
type: Gene
SIO_000068: ncbigene

position:7707743:1
position: 7707743
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7709438:1
position: 7709438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7707743-7709438:1:exon

LOC100409105
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9483
gene: LOC100409105
product: phosphoglycerate kinase 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
transcript id: XR_004737669.2
SIO_010081: LOC100409105
so part of: LOC100409105
location: 7707743..7709438
location: region:7707743-7709438:1
so has part: feature:7707743-7709438:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7707743-7709438:1:exon

LOC100409820
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100409820
note: tubulin beta chain-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 7871512..7872123
location: region:7871512-7872123:1
so has part: feature:7871512-7872123:1:exon

100409820
type: Gene
SIO_000068: ncbigene

position:7871512:1
position: 7871512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:7872123:1
position: 7872123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7871512-7872123:1:exon

LOC100409820
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100409820
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins
pseudo: true
SIO_010081: LOC100409820
subclass of: SO_0000673
so part of: LOC100409820
location: 7871512..7872123
location: region:7871512-7872123:1
so has part: feature:7871512-7872123:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:7871512-7872123:1:exon

LOC118149914
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149914
note: uncharacterized LOC118149914; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(7940581..8046115)
location: region:7940581-8046115:-1
so has part: feature:7940581-8046115:-1:exon
subclass of: SO_0000011

118149914
type: Gene
SIO_000068: ncbigene

position:7940581:-1
position: 7940581
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8046115:-1
position: 8046115
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:7940581-8046115:-1:exon

LOC118149914
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149914
product: uncharacterized LOC118149914, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008478307.1
SIO_010081: LOC118149914
subclass of: SO_0000673
so part of: LOC118149914
location: complement(join(7940581..7940777,8013034..8013268,8045974..8046115))
location: region:7940581-8046115:-1
so has part: feature:8045974-8046115:-1:exon
so has part: feature:8013034-8013268:-1:exon
so has part: feature:7940581-7940777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8045974-8046115:-1:exon

position:8045974:-1
position: 8045974
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8013034-8013268:-1:exon

position:8013034:-1
position: 8013034
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8013268:-1
position: 8013268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:7940581-7940777:-1:exon

position:7940777:-1
position: 7940777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118149914
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149914
product: uncharacterized LOC118149914, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737668.2
SIO_010081: LOC118149914
subclass of: SO_0000673
so part of: LOC118149914
location: complement(join(7940581..7940777,8012668..8012713,8013034..8013268,8045974..8046115))
location: region:7940581-8046115:-1
so has part: feature:8045974-8046115:-1:exon
so has part: feature:8013034-8013268:-1:exon
so has part: feature:8012668-8012713:-1:exon
so has part: feature:7940581-7940777:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8045974-8046115:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8013034-8013268:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8012668-8012713:-1:exon

position:8012668:-1
position: 8012668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8012713:-1
position: 8012713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:7940581-7940777:-1:exon

LOC100410180
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100410180
note: RNA-binding protein EWS-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8022499..8024569
location: region:8022499-8024569:1
so has part: feature:8022499-8024569:1:exon

100410180
type: Gene
SIO_000068: ncbigene

position:8022499:1
position: 8022499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8024569:1
position: 8024569
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8022499-8024569:1:exon

LOC100410180
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9483
gene: LOC100410180
product: RNA-binding protein EWS-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 10 ESTs, 13 Proteins
pseudo: true
transcript id: XR_008478306.1
SIO_010081: LOC100410180
so part of: LOC100410180
location: 8022499..8024569
location: region:8022499-8024569:1
so has part: feature:8022499-8024569:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8022499-8024569:1:exon

LOC118149957
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149957
note: uncharacterized LOC118149957; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 8151907..8170368
location: region:8151907-8170368:1
so has part: feature:8151907-8170368:1:exon
subclass of: SO_0000011

118149957
type: Gene
SIO_000068: ncbigene

position:8151907:1
position: 8151907
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8170368:1
position: 8170368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8151907-8170368:1:exon

LOC118149957
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149957
product: uncharacterized LOC118149957
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737737.2
SIO_010081: LOC118149957
subclass of: SO_0000673
so part of: LOC118149957
location: join(8151907..8151952,8166411..8166475,8170186..8170368)
location: region:8151907-8170368:1
so has part: feature:8151907-8151952:1:exon
so has part: feature:8166411-8166475:1:exon
so has part: feature:8170186-8170368:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8151907-8151952:1:exon

position:8151952:1
position: 8151952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8166411-8166475:1:exon

position:8166411:1
position: 8166411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8166475:1
position: 8166475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8170186-8170368:1:exon

position:8170186:1
position: 8170186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118149991
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149991
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8186834..8186937)
location: region:8186834-8186937:-1
so has part: feature:8186834-8186937:-1:exon
subclass of: SO_0000623

118149991
type: Gene
SIO_000068: ncbigene

position:8186834:-1
position: 8186834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8186937:-1
position: 8186937
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8186834-8186937:-1:exon

LOC118149991
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118149991
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737761.2
SIO_010081: LOC118149991
subclass of: SO_0000673
so part of: LOC118149991
location: complement(8186834..8186937)
location: region:8186834-8186937:-1
so has part: feature:8186834-8186937:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8186834-8186937:-1:exon

CADM2
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: CADM2
note: cell adhesion molecule 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8308535..8661426)
location: region:8308535-8661426:-1
so has part: feature:8308535-8661426:-1:exon
subclass of: SO_0000010

100411621
type: Gene
SIO_000068: ncbigene

position:8308535:-1
position: 8308535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8661426:-1
position: 8661426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8308535-8661426:-1:exon

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CADM2
product: cell adhesion molecule 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035283214.2
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8308535..8316266,8317039..8317164,8397141..8397260,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486687,8572800..8572949,8661129..8661426))
location: region:8308535-8661426:-1
so has part: feature:8661129-8661426:-1:exon
so has part: feature:8572800-8572949:-1:exon
so has part: feature:8486535-8486687:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8397141-8397260:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8308535-8316266:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8661129-8661426:-1:exon

position:8661129:-1
position: 8661129
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8572800-8572949:-1:exon

position:8572800:-1
position: 8572800
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8572949:-1
position: 8572949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:8486535-8486687:-1:exon

position:8486535:-1
position: 8486535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8486687:-1
position: 8486687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8483625-8483762:-1:exon

position:8483625:-1
position: 8483625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8483762:-1
position: 8483762
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:8459450-8459620:-1:exon

position:8459450:-1
position: 8459450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8459620:-1
position: 8459620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:8437995-8438085:-1:exon

position:8437995:-1
position: 8437995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8438085:-1
position: 8438085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:8414028-8414206:-1:exon

position:8414028:-1
position: 8414028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8414206:-1
position: 8414206
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:8397141-8397260:-1:exon

position:8397141:-1
position: 8397141
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8397260:-1
position: 8397260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:8317039-8317164:-1:exon

position:8317039:-1
position: 8317039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8317164:-1
position: 8317164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:8308535-8316266:-1:exon

position:8316266:-1
position: 8316266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CADM2
product: cell adhesion molecule 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986459.3
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8308535..8316266,8317039..8317164,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486687,8572800..8572949,8661129..8661261))
location: region:8308535-8661261:-1
so has part: feature:8661129-8661261:-1:exon
so has part: feature:8572800-8572949:-1:exon
so has part: feature:8486535-8486687:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8308535-8316266:-1:exon

position:8661261:-1
position: 8661261
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8661129-8661261:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8572800-8572949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8486535-8486687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8483625-8483762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459450-8459620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8437995-8438085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8414028-8414206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8317039-8317164:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8308535-8316266:-1:exon

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CADM2
product: cell adhesion molecule 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035283216.2
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8308535..8316266,8317039..8317164,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486687,8572800..8572951))
location: region:8308535-8572951:-1
so has part: feature:8572800-8572951:-1:exon
so has part: feature:8486535-8486687:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8308535-8316266:-1:exon

position:8572951:-1
position: 8572951
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8572800-8572951:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8486535-8486687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8483625-8483762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8459450-8459620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8437995-8438085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8414028-8414206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8317039-8317164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8308535-8316266:-1:exon

CADM2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: CADM2
product: cell adhesion molecule 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986461.4
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8308535..8316266,8317039..8317164,8397141..8397260,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486687,8501016..8501157))
location: region:8308535-8501157:-1
so has part: feature:8501016-8501157:-1:exon
so has part: feature:8486535-8486687:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8397141-8397260:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8308535-8316266:-1:exon

position:8501157:-1
position: 8501157
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8501016-8501157:-1:exon

position:8501016:-1
position: 8501016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:8486535-8486687:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8483625-8483762:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8459450-8459620:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8437995-8438085:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8414028-8414206:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8397141-8397260:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8317039-8317164:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8308535-8316266:-1:exon

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2 isoform X2
translation: MFVLFLCNLSLVPAAASKNKVKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDPNALAGQNGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8316148..8316266,8317039..8317164,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486687,8572800..8572949,8661129..8661195))
location: region:8316148-8661195:-1
so has part: feature:8661129-8661195:-1:exon
so has part: feature:8572800-8572949:-1:exon
so has part: feature:8486535-8486687:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8316148-8316266:-1:exon

XP_008984707.2
type: Protein
SIO_000068: ncbiprotein

position:8316148:-1
position: 8316148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8661195:-1
position: 8661195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8661129-8661195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8572800-8572949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8486535-8486687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8483625-8483762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459450-8459620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8437995-8438085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8414028-8414206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8317039-8317164:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8316148-8316266:-1:exon

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2 isoform X1
translation: MFVLFLCNLSLVPAAASKNKVKGSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFTMPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTTIPSLTTATVTTTVAITTSPTTSAATSSIRDPNALAGQNGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8316148..8316266,8317039..8317164,8397141..8397260,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486687,8572800..8572949,8661129..8661195))
location: region:8316148-8661195:-1
so has part: feature:8661129-8661195:-1:exon
so has part: feature:8572800-8572949:-1:exon
so has part: feature:8486535-8486687:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8397141-8397260:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8316148-8316266:-1:exon

XP_035139105.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8661129-8661195:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8572800-8572949:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8486535-8486687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8483625-8483762:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8459450-8459620:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8437995-8438085:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8414028-8414206:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8397141-8397260:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:8317039-8317164:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:8316148-8316266:-1:exon

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2 isoform X4
translation: MPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDPNALAGQNGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8316148..8316266,8317039..8317164,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486574))
location: region:8316148-8486574:-1
so has part: feature:8486535-8486574:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8316148-8316266:-1:exon

XP_035139107.2
type: Protein
SIO_000068: ncbiprotein

position:8486574:-1
position: 8486574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8486535-8486574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8483625-8483762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8459450-8459620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8437995-8438085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8414028-8414206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8317039-8317164:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8316148-8316266:-1:exon

CADM2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: CADM2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cell adhesion molecule 2 isoform X3
translation: MPVKTSKAYLTVLGVPEKPQISGFSSPVMEGDLMQLTCKTSGSKPAADIRWFKNDKEIKDVKYLKEEDANRKTFTVSSTLDFRVDRSDDGVAVICRVDHESLNATPQVAMQVLEIHYTPSVKIIPSTPFPQEGQPLILTCESKGKPLPEPVLWTKDGGELPDPDRMVVSGRELNILFLNKTDNGTYRCEATNTIGQSSAEYVLIVHDVPNTLLPTTTIPSLTTATVTTTVAITTSPTTSAATSSIRDPNALAGQNGPDHALIGGIVAVVVFVTLCSIFLLGRYLARHKGTYLTNEAKGAEDAPDADTAIINAEGSQVNAEEKKEYFI
SIO_010081: CADM2
subclass of: SO_0000673
so part of: CADM2
location: complement(join(8316148..8316266,8317039..8317164,8397141..8397260,8414028..8414206,8437995..8438085,8459450..8459620,8483625..8483762,8486535..8486574))
location: region:8316148-8486574:-1
so has part: feature:8486535-8486574:-1:exon
so has part: feature:8483625-8483762:-1:exon
so has part: feature:8459450-8459620:-1:exon
so has part: feature:8437995-8438085:-1:exon
so has part: feature:8414028-8414206:-1:exon
so has part: feature:8397141-8397260:-1:exon
so has part: feature:8317039-8317164:-1:exon
so has part: feature:8316148-8316266:-1:exon

XP_008984709.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:8486535-8486574:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:8483625-8483762:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:8459450-8459620:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8437995-8438085:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:8414028-8414206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:8397141-8397260:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:8317039-8317164:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:8316148-8316266:-1:exon

LOC118149947
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149947
note: heme-binding protein 1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 8500780..8501646
location: region:8500780-8501646:1
so has part: feature:8500780-8501646:1:exon

118149947
type: Gene
SIO_000068: ncbigene

position:8500780:1
position: 8500780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:8501646:1
position: 8501646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8500780-8501646:1:exon

LOC118149947
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC118149947
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins
pseudo: true
SIO_010081: LOC118149947
subclass of: SO_0000673
so part of: LOC118149947
location: 8500780..8501646
location: region:8500780-8501646:1
so has part: feature:8500780-8501646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8500780-8501646:1:exon

LOC118150049
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150049
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(8882609..8882715)
location: region:8882609-8882715:-1
so has part: feature:8882609-8882715:-1:exon
subclass of: SO_0000623

118150049
type: Gene
SIO_000068: ncbigene

position:8882609:-1
position: 8882609
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:8882715:-1
position: 8882715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8882609-8882715:-1:exon

LOC118150049
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150049
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737810.1
SIO_010081: LOC118150049
subclass of: SO_0000673
so part of: LOC118150049
location: complement(8882609..8882715)
location: region:8882609-8882715:-1
so has part: feature:8882609-8882715:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:8882609-8882715:-1:exon

LOC128930396
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930396
note: uncharacterized LOC128930396; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(8886215..9423162)
location: region:8886215-9423162:-1
so has part: feature:8886215-9423162:-1:exon
subclass of: SO_0000010

128930396
type: Gene
SIO_000068: ncbigene

position:8886215:-1
position: 8886215
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9423162:-1
position: 9423162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:8886215-9423162:-1:exon

LOC128930396
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC128930396
product: uncharacterized LOC128930396
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249167.1
SIO_010081: LOC128930396
subclass of: SO_0000673
so part of: LOC128930396
location: complement(join(8886215..8890304,9421450..9422143,9422377..9422400,9423154..9423162))
location: region:8886215-9423162:-1
so has part: feature:9423154-9423162:-1:exon
so has part: feature:9422377-9422400:-1:exon
so has part: feature:9421450-9422143:-1:exon
so has part: feature:8886215-8890304:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:9423154-9423162:-1:exon

position:9423154:-1
position: 9423154
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:9422377-9422400:-1:exon

position:9422377:-1
position: 9422377
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9422400:-1
position: 9422400
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:9421450-9422143:-1:exon

position:9421450:-1
position: 9421450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:9422143:-1
position: 9422143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:8886215-8890304:-1:exon

position:8890304:-1
position: 8890304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128930396
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC128930396
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC128930396
translation: MKKFGRDVSKESCRRRCRRRRRRCRCCHSHRRSRSIREPPLPPLPPLPPLALLPPLLSPLPGPGDTPGASGGAAGLPRSPPALPLLTCPLLGALARTFSDTPASLHHLLGQPRRALGLAVSAERKASPEPPPGRRAVTAAPAGGGGGEETISPTDTPFCGRFAAAASAAADPCPRVRTPQRRGRWVRRAPGGGHQRSPALSRPARQHLLAPSLLPQPFREGTMIWKRSAVLRFYSVCGLLLQGKHINHSSIIRLHQGKTRQSGEVISYSNA
SIO_010081: LOC128930396
subclass of: SO_0000673
so part of: LOC128930396
location: complement(join(8890216..8890304,9421450..9422143,9422377..9422400,9423154..9423162))
location: region:8890216-9423162:-1
so has part: feature:9423154-9423162:-1:exon
so has part: feature:9422377-9422400:-1:exon
so has part: feature:9421450-9422143:-1:exon
so has part: feature:8890216-8890304:-1:exon

XP_054105142.1
type: Protein
SIO_000068: ncbiprotein

position:8890216:-1
position: 8890216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9423154-9423162:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:9422377-9422400:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:9421450-9422143:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:8890216-8890304:-1:exon

LOC100410905
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100410905
note: aldo-keto reductase family 1 member B1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 9761565..9762667
location: region:9761565-9762667:1
so has part: feature:9761565-9762667:1:exon

100410905
type: Gene
SIO_000068: ncbigene

position:9761565:1
position: 9761565
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:9762667:1
position: 9762667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9761565-9762667:1:exon

LOC100410905
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100410905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC100410905
subclass of: SO_0000673
so part of: LOC100410905
location: 9761565..9761792
location: region:9761565-9761792:1
so has part: feature:9761565-9761792:1:exon

position:9761792:1
position: 9761792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9761565-9761792:1:exon

LOC100410905
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC100410905
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
pseudo: true
SIO_010081: LOC100410905
subclass of: SO_0000673
so part of: LOC100410905
location: 9761885..9762667
location: region:9761885-9762667:1
so has part: feature:9761885-9762667:1:exon

position:9761885:1
position: 9761885
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:9761885-9762667:1:exon

LOC118149996
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149996
note: U7 small nuclear RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 10132929..10132994
location: region:10132929-10132994:1
so has part: feature:10132929-10132994:1:exon

118149996
type: Gene
SIO_000068: ncbigene

position:10132929:1
position: 10132929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10132994:1
position: 10132994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10132929-10132994:1:exon

LOC118149996
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC118149996
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00066
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118149996
subclass of: SO_0000673
so part of: LOC118149996
location: 10132929..10132994
location: region:10132929-10132994:1
so has part: feature:10132929-10132994:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10132929-10132994:1:exon

LOC100411262
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100411262
note: tyrosine-protein kinase RYK-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10242181..10242592)
location: region:10242181-10242592:-1
so has part: feature:10242181-10242592:-1:exon
subclass of: SO_0000010

100411262
type: Gene
SIO_000068: ncbigene

position:10242181:-1
position: 10242181
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10242592:-1
position: 10242592
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10242181-10242592:-1:exon

LOC100411262
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC100411262
product: tyrosine-protein kinase RYK-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins
transcript id: XM_035283159.2
SIO_010081: LOC100411262
subclass of: SO_0000673
so part of: LOC100411262
location: complement(10242181..10242592)
location: region:10242181-10242592:-1
so has part: feature:10242181-10242592:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10242181-10242592:-1:exon

LOC100411262
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC100411262
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tyrosine-protein kinase RYK-like
translation: MDYHCLGDNENRPVRRMALEILVNNEFSAAGDVCAFGVTLWELMTLGQTPYVDIDAFEMAAYLKDGYRIAQPINCPDELFAVMACCWALDPEERPKFQQLVQCLTEIHASLGAYV
SIO_010081: LOC100411262
subclass of: SO_0000673
so part of: LOC100411262
location: complement(10242218..10242565)
location: region:10242218-10242565:-1
so has part: feature:10242218-10242565:-1:exon

XP_035139050.2
type: Protein
SIO_000068: ncbiprotein

position:10242218:-1
position: 10242218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10242565:-1
position: 10242565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10242218-10242565:-1:exon

LOC128930344
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930344
note: nuclear transport factor 2-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(10784255..10784901)
location: region:10784255-10784901:-1
so has part: feature:10784255-10784901:-1:exon
subclass of: SO_0000010

128930344
type: Gene
SIO_000068: ncbigene

position:10784255:-1
position: 10784255
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10784901:-1
position: 10784901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10784255-10784901:-1:exon

LOC128930344
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC128930344
product: nuclear transport factor 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 53 ESTs, 4 Proteins
transcript id: XM_054248981.1
SIO_010081: LOC128930344
subclass of: SO_0000673
so part of: LOC128930344
location: complement(10784255..10784901)
location: region:10784255-10784901:-1
so has part: feature:10784255-10784901:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10784255-10784901:-1:exon

LOC128930344
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC128930344
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear transport factor 2-like
translation: MGDKPIWEQIGSSFIQHYYQLFDNDRIQLGAIYIDASCLTWEGQQFQGNAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRLALHNFG
SIO_010081: LOC128930344
subclass of: SO_0000673
so part of: LOC128930344
location: complement(10784442..10784825)
location: region:10784442-10784825:-1
so has part: feature:10784442-10784825:-1:exon

XP_054104956.1
type: Protein
SIO_000068: ncbiprotein

position:10784442:-1
position: 10784442
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:10784825:-1
position: 10784825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10784442-10784825:-1:exon

LOC118149932
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149932
note: uncharacterized LOC118149932; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 10813767..10816473
location: region:10813767-10816473:1
so has part: feature:10813767-10816473:1:exon
subclass of: SO_0000011

118149932
type: Gene
SIO_000068: ncbigene

position:10813767:1
position: 10813767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10816473:1
position: 10816473
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:10813767-10816473:1:exon

LOC118149932
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149932
product: uncharacterized LOC118149932
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737698.2
SIO_010081: LOC118149932
subclass of: SO_0000673
so part of: LOC118149932
location: join(10813767..10813925,10814745..10814833,10816162..10816473)
location: region:10813767-10816473:1
so has part: feature:10813767-10813925:1:exon
so has part: feature:10814745-10814833:1:exon
so has part: feature:10816162-10816473:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:10813767-10813925:1:exon

position:10813925:1
position: 10813925
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:10814745-10814833:1:exon

position:10814745:1
position: 10814745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:10814833:1
position: 10814833
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:10816162-10816473:1:exon

position:10816162:1
position: 10816162
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118150036
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150036
note: U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(11105311..11105451)
location: region:11105311-11105451:-1
so has part: feature:11105311-11105451:-1:exon
subclass of: SO_0000623

118150036
type: Gene
SIO_000068: ncbigene

position:11105311:-1
position: 11105311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11105451:-1
position: 11105451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11105311-11105451:-1:exon

LOC118150036
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150036
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737798.1
SIO_010081: LOC118150036
subclass of: SO_0000673
so part of: LOC118150036
location: complement(11105311..11105451)
location: region:11105311-11105451:-1
so has part: feature:11105311-11105451:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11105311-11105451:-1:exon

LOC118150006
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150006
note: small nucleolar RNA SNORA48; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 11113781..11113915
location: region:11113781-11113915:1
so has part: feature:11113781-11113915:1:exon
subclass of: SO_0000578

118150006
type: Gene
SIO_000068: ncbigene

position:11113781:1
position: 11113781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11113915:1
position: 11113915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11113781-11113915:1:exon

LOC118150006
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snoRNA
gene: LOC118150006
product: small nucleolar RNA SNORA48
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00554
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737775.2
SIO_010081: LOC118150006
subclass of: SO_0000673
so part of: LOC118150006
location: 11113781..11113915
location: region:11113781-11113915:1
so has part: feature:11113781-11113915:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11113781-11113915:1:exon

LOC118149962
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149962
note: uncharacterized LOC118149962; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11649069..11654520)
location: region:11649069-11654520:-1
so has part: feature:11649069-11654520:-1:exon
subclass of: SO_0000011

118149962
type: Gene
SIO_000068: ncbigene

position:11649069:-1
position: 11649069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11654520:-1
position: 11654520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11649069-11654520:-1:exon

LOC118149962
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149962
product: uncharacterized LOC118149962
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737741.2
SIO_010081: LOC118149962
subclass of: SO_0000673
so part of: LOC118149962
location: complement(join(11649069..11649200,11649314..11649438,11649601..11649714,11654452..11654520))
location: region:11649069-11654520:-1
so has part: feature:11654452-11654520:-1:exon
so has part: feature:11649601-11649714:-1:exon
so has part: feature:11649314-11649438:-1:exon
so has part: feature:11649069-11649200:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11654452-11654520:-1:exon

position:11654452:-1
position: 11654452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11649601-11649714:-1:exon

position:11649601:-1
position: 11649601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11649714:-1
position: 11649714
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11649314-11649438:-1:exon

position:11649314:-1
position: 11649314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:11649438:-1
position: 11649438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11649069-11649200:-1:exon

position:11649200:-1
position: 11649200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118149955
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149955
note: uncharacterized LOC118149955; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 11874037..11877986
location: region:11874037-11877986:1
so has part: feature:11874037-11877986:1:exon
subclass of: SO_0000011

118149955
type: Gene
SIO_000068: ncbigene

position:11874037:1
position: 11874037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11877986:1
position: 11877986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11874037-11877986:1:exon

LOC118149955
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149955
product: uncharacterized LOC118149955
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737734.2
SIO_010081: LOC118149955
subclass of: SO_0000673
so part of: LOC118149955
location: join(11874037..11874101,11874432..11874535,11876156..11876340,11877755..11877986)
location: region:11874037-11877986:1
so has part: feature:11874037-11874101:1:exon
so has part: feature:11874432-11874535:1:exon
so has part: feature:11876156-11876340:1:exon
so has part: feature:11877755-11877986:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11874037-11874101:1:exon

position:11874101:1
position: 11874101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:11874432-11874535:1:exon

position:11874432:1
position: 11874432
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11874535:1
position: 11874535
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11876156-11876340:1:exon

position:11876156:1
position: 11876156
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11876340:1
position: 11876340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:11877755-11877986:1:exon

position:11877755:1
position: 11877755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC128930397
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930397
note: histone-lysine N-methyltransferase SETMAR-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 11963358..11964382
location: region:11963358-11964382:1
so has part: feature:11963358-11964382:1:exon

128930397
type: Gene
SIO_000068: ncbigene

position:11963358:1
position: 11963358
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:11964382:1
position: 11964382
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11963358-11964382:1:exon

LOC128930397
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC128930397
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
pseudo: true
SIO_010081: LOC128930397
subclass of: SO_0000673
so part of: LOC128930397
location: 11963358..11964382
location: region:11963358-11964382:1
so has part: feature:11963358-11964382:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11963358-11964382:1:exon

LOC118149909
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149909
note: uncharacterized LOC118149909; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12123259..12154717
location: region:12123259-12154717:1
so has part: feature:12123259-12154717:1:exon
subclass of: SO_0000011

118149909
type: Gene
SIO_000068: ncbigene

position:12123259:1
position: 12123259
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12154717:1
position: 12154717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12123259-12154717:1:exon

LOC118149909
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149909
product: uncharacterized LOC118149909
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737660.2
SIO_010081: LOC118149909
subclass of: SO_0000673
so part of: LOC118149909
location: join(12123259..12123467,12149074..12149133,12153768..12154717)
location: region:12123259-12154717:1
so has part: feature:12123259-12123467:1:exon
so has part: feature:12149074-12149133:1:exon
so has part: feature:12153768-12154717:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12123259-12123467:1:exon

position:12123467:1
position: 12123467
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12149074-12149133:1:exon

position:12149074:1
position: 12149074
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12149133:1
position: 12149133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12153768-12154717:1:exon

position:12153768:1
position: 12153768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC118149892
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149892
note: uncharacterized LOC118149892; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12156864..12228561)
location: region:12156864-12228561:-1
so has part: feature:12156864-12228561:-1:exon
subclass of: SO_0000011

118149892
type: Gene
SIO_000068: ncbigene

position:12156864:-1
position: 12156864
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12228561:-1
position: 12228561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12156864-12228561:-1:exon

LOC118149892
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149892
product: uncharacterized LOC118149892
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737642.2
SIO_010081: LOC118149892
subclass of: SO_0000673
so part of: LOC118149892
location: complement(join(12156864..12157481,12192047..12192208,12228235..12228561))
location: region:12156864-12228561:-1
so has part: feature:12228235-12228561:-1:exon
so has part: feature:12192047-12192208:-1:exon
so has part: feature:12156864-12157481:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12228235-12228561:-1:exon

position:12228235:-1
position: 12228235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12192047-12192208:-1:exon

position:12192047:-1
position: 12192047
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12192208:-1
position: 12192208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12156864-12157481:-1:exon

position:12157481:-1
position: 12157481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GBE1
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: GBE1
note: 1,4-alpha-glucan branching enzyme 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 12245457..12525130
location: region:12245457-12525130:1
so has part: feature:12245457-12525130:1:exon
subclass of: SO_0000010

100389628
type: Gene
SIO_000068: ncbigene

position:12245457:1
position: 12245457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12525130:1
position: 12525130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12245457-12525130:1:exon

GBE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: GBE1
product: 1,4-alpha-glucan branching enzyme 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_017967116.3
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(12245457..12246240,12297720..12297889,12333766..12333881,12355914..12356039,12356870..12357005,12359678..12359768,12363174..12363383,12420201..12420316,12423772..12423899,12428321..12428419,12433419..12433529,12436533..12436704,12483658..12483842,12485422..12485552,12515754..12515871,12524365..12525130)
location: region:12245457-12525130:1
so has part: feature:12245457-12246240:1:exon
so has part: feature:12297720-12297889:1:exon
so has part: feature:12333766-12333881:1:exon
so has part: feature:12355914-12356039:1:exon
so has part: feature:12356870-12357005:1:exon
so has part: feature:12359678-12359768:1:exon
so has part: feature:12363174-12363383:1:exon
so has part: feature:12420201-12420316:1:exon
so has part: feature:12423772-12423899:1:exon
so has part: feature:12428321-12428419:1:exon
so has part: feature:12433419-12433529:1:exon
so has part: feature:12436533-12436704:1:exon
so has part: feature:12483658-12483842:1:exon
so has part: feature:12485422-12485552:1:exon
so has part: feature:12515754-12515871:1:exon
so has part: feature:12524365-12525130:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12245457-12246240:1:exon

position:12246240:1
position: 12246240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12297720-12297889:1:exon

position:12297720:1
position: 12297720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12297889:1
position: 12297889
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12333766-12333881:1:exon

position:12333766:1
position: 12333766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12333881:1
position: 12333881
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12355914-12356039:1:exon

position:12355914:1
position: 12355914
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12356039:1
position: 12356039
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:12356870-12357005:1:exon

position:12356870:1
position: 12356870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12357005:1
position: 12357005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:12359678-12359768:1:exon

position:12359678:1
position: 12359678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12359768:1
position: 12359768
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:12363174-12363383:1:exon

position:12363174:1
position: 12363174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12363383:1
position: 12363383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:12420201-12420316:1:exon

position:12420201:1
position: 12420201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12420316:1
position: 12420316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:12423772-12423899:1:exon

position:12423772:1
position: 12423772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12423899:1
position: 12423899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:12428321-12428419:1:exon

position:12428321:1
position: 12428321
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12428419:1
position: 12428419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:12433419-12433529:1:exon

position:12433419:1
position: 12433419
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12433529:1
position: 12433529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:12436533-12436704:1:exon

position:12436533:1
position: 12436533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12436704:1
position: 12436704
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:12483658-12483842:1:exon

position:12483658:1
position: 12483658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12483842:1
position: 12483842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:12485422-12485552:1:exon

position:12485422:1
position: 12485422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12485552:1
position: 12485552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:12515754-12515871:1:exon

position:12515754:1
position: 12515754
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12515871:1
position: 12515871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:12524365-12525130:1:exon

position:12524365:1
position: 12524365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GBE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: GBE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1,4-alpha-glucan-branching enzyme isoform X1
translation: MAAPAEGSEAALKAALADVPELARLLEIDPYLKPYAVDFQRRYKQFSQILNSIGENEGGIDKFSRGYESFGVHRCADGGLYCKEWAPGAEGVFLTGDFNAWNPFSYPYKKLDYGKWELYIPPKKNKSVLVPHGSKLKVVIKSKSGEILYRISPWAKYVVREADNVNYDWIHWDPEHLYKFKHSRPKKPRSLRIYESHVGISSHEGKVASYKHFTCNVLPRIKDLGYNCIQLMAIMEHAYYASFGYQITSFFAASSRYGTPEELKELVDTAHSMDIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGIGQGFSGDYSEYFGLQVDEDALTYLMLANHLAHTLYPDSITVAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGNIVYTLTNRRYLEKCIAYAESHDQALVGDKTLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERFGWLSAPQAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEHNGRPCSLLVYIPSRVALILQNVDPPN
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(12246116..12246240,12297720..12297889,12333766..12333881,12355914..12356039,12356870..12357005,12359678..12359768,12363174..12363383,12420201..12420316,12423772..12423899,12428321..12428419,12433419..12433529,12436533..12436704,12483658..12483842,12485422..12485552,12515754..12515871,12524365..12524421)
location: region:12246116-12524421:1
so has part: feature:12246116-12246240:1:exon
so has part: feature:12297720-12297889:1:exon
so has part: feature:12333766-12333881:1:exon
so has part: feature:12355914-12356039:1:exon
so has part: feature:12356870-12357005:1:exon
so has part: feature:12359678-12359768:1:exon
so has part: feature:12363174-12363383:1:exon
so has part: feature:12420201-12420316:1:exon
so has part: feature:12423772-12423899:1:exon
so has part: feature:12428321-12428419:1:exon
so has part: feature:12433419-12433529:1:exon
so has part: feature:12436533-12436704:1:exon
so has part: feature:12483658-12483842:1:exon
so has part: feature:12485422-12485552:1:exon
so has part: feature:12515754-12515871:1:exon
so has part: feature:12524365-12524421:1:exon

XP_017822605.1
type: Protein
SIO_000068: ncbiprotein

position:12246116:1
position: 12246116
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12524421:1
position: 12524421
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12246116-12246240:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12297720-12297889:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12333766-12333881:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12355914-12356039:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12356870-12357005:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12359678-12359768:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12363174-12363383:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12420201-12420316:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12423772-12423899:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12428321-12428419:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12433419-12433529:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12436533-12436704:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12483658-12483842:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12485422-12485552:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12515754-12515871:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:12524365-12524421:1:exon

GBE1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: GBE1
product: 1,4-alpha-glucan branching enzyme 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054249022.1
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(12246137..12246271,12333766..12333881,12355914..12356039,12356870..12357005,12359678..12359768,12363174..12363383,12420201..12420316,12423772..12423899,12428321..12428419,12433419..12433529,12436533..12436704,12483658..12483842,12485422..12485552,12515754..12515871,12524365..12525130)
location: region:12246137-12525130:1
so has part: feature:12246137-12246271:1:exon
so has part: feature:12333766-12333881:1:exon
so has part: feature:12355914-12356039:1:exon
so has part: feature:12356870-12357005:1:exon
so has part: feature:12359678-12359768:1:exon
so has part: feature:12363174-12363383:1:exon
so has part: feature:12420201-12420316:1:exon
so has part: feature:12423772-12423899:1:exon
so has part: feature:12428321-12428419:1:exon
so has part: feature:12433419-12433529:1:exon
so has part: feature:12436533-12436704:1:exon
so has part: feature:12483658-12483842:1:exon
so has part: feature:12485422-12485552:1:exon
so has part: feature:12515754-12515871:1:exon
so has part: feature:12524365-12525130:1:exon

position:12246137:1
position: 12246137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12246137-12246271:1:exon

position:12246271:1
position: 12246271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12333766-12333881:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12355914-12356039:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12356870-12357005:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12359678-12359768:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12363174-12363383:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12420201-12420316:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12423772-12423899:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12428321-12428419:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12433419-12433529:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12436533-12436704:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:12483658-12483842:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:12485422-12485552:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:12515754-12515871:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:12524365-12525130:1:exon

GBE1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: GBE1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 1,4-alpha-glucan-branching enzyme isoform X2
translation: MAIMEHAYYASFGYQITSFFAASSRYGTPEELKELVDTAHSMDIIVLLDVVHSHASKNSADGLNMFDGTDSCYFHSGPRGTHDLWDSRLFAYSSWEVLRFLLSNIRWWLEEYRFDGFRFDGVTSMLYHHHGIGQGFSGDYSEYFGLQVDEDALTYLMLANHLAHTLYPDSITVAEDVSGMPALCSPISQGGGGFDYRLAMAIPDKWIQLLKEFKDEDWNMGNIVYTLTNRRYLEKCIAYAESHDQALVGDKTLAFWLMDAEMYTNMSVLTPFTPVIDRGIQLHKMIRLITHGLGGEGYLNFMGNEFGHPEWLDFPRKGNNESYHYARRQFHLTDDDLLRYKFLNNFDRDMNRLEERFGWLSAPQAYVSEKHEGNKIIAFERAGLLFIFNFHPSKSYTDYRVGTALPGKFKIVLDSDAAEYGGHQRLDHSTDFFSEAFEHNGRPCSLLVYIPSRVALILQNVDPPN
SIO_010081: GBE1
subclass of: SO_0000673
so part of: GBE1
location: join(12359698..12359768,12363174..12363383,12420201..12420316,12423772..12423899,12428321..12428419,12433419..12433529,12436533..12436704,12483658..12483842,12485422..12485552,12515754..12515871,12524365..12524421)
location: region:12359698-12524421:1
so has part: feature:12359698-12359768:1:exon
so has part: feature:12363174-12363383:1:exon
so has part: feature:12420201-12420316:1:exon
so has part: feature:12423772-12423899:1:exon
so has part: feature:12428321-12428419:1:exon
so has part: feature:12433419-12433529:1:exon
so has part: feature:12436533-12436704:1:exon
so has part: feature:12483658-12483842:1:exon
so has part: feature:12485422-12485552:1:exon
so has part: feature:12515754-12515871:1:exon
so has part: feature:12524365-12524421:1:exon

XP_054104997.1
type: Protein
SIO_000068: ncbiprotein

position:12359698:1
position: 12359698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12359698-12359768:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12363174-12363383:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12420201-12420316:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12423772-12423899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:12428321-12428419:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:12433419-12433529:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:12436533-12436704:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:12483658-12483842:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:12485422-12485552:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:12515754-12515871:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:12524365-12524421:1:exon

LOC100387089
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100387089
note: spermatogenesis-associated protein 31D1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12364280..12377735)
location: region:12364280-12377735:-1
so has part: feature:12364280-12377735:-1:exon
subclass of: SO_0000010

100387089
type: Gene
SIO_000068: ncbigene

position:12364280:-1
position: 12364280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12377735:-1
position: 12377735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12364280-12377735:-1:exon

LOC100387089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC100387089
product: spermatogenesis-associated protein 31D1-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
transcript id: XM_035282961.2
SIO_010081: LOC100387089
subclass of: SO_0000673
so part of: LOC100387089
location: complement(join(12364280..12375772,12376037..12376097,12376700..12376745,12377495..12377735))
location: region:12364280-12377735:-1
so has part: feature:12377495-12377735:-1:exon
so has part: feature:12376700-12376745:-1:exon
so has part: feature:12376037-12376097:-1:exon
so has part: feature:12364280-12375772:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12377495-12377735:-1:exon

position:12377495:-1
position: 12377495
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12376700-12376745:-1:exon

position:12376700:-1
position: 12376700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12376745:-1
position: 12376745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:12376037-12376097:-1:exon

position:12376037:-1
position: 12376037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12376097:-1
position: 12376097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:12364280-12375772:-1:exon

position:12375772:-1
position: 12375772
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC100387089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC100387089
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 2 codons; deleted 1 base in 1 codon; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(12371671..12371673), aa:OTHER)
product: LOW QUALITY PROTEIN: spermatogenesis-associated protein 31D1-like
translation: MENILCFLNSYTESGLGPGLAHCLDIDPTFLCLSGLGLFMLSLFYLLWTLYLSCAGKNNDIPMHQGRARRRKKGGTFKDWTTFQKEAEEERKLVSILKSFGPSAFCSPLGQHHETTGIRRLLCPDPLCVVCNRIAAEAERRMYWESLKDAAPSVSPSASAASETESSLTLASASSATPPEDLIVSPCPDPSPSPPLILSPDLITPLADLFSPSPLRDPLPPKPVSPLDSKFPIDHSTHQQLPFPLLPPHHIQRAEPNLHPEASLSLNTIFSFDSTLSQDTNSLPNISQAMNPCDSCTFHYKPPNSSALRMQDCTVTEYEANLTILKPLEKEMLSIGGSGRSTTSAPTIGDIDHSCPASAEFSWWQPHPKDAFSSNSVPSDFLQELLSLHSSEASLGGYSVADLIMPVKLSFLSHDIVAQLERQVKKRIDFLLHKENGKKPGTFPKHLRPNYQLNSSGKMLASIADKHGLATSLPFGASNRKVERLHIHQQPPNSTCFEDHLEQKHLQLFQGLPSLHSESQNPTVPQRGRSSTFAFFNETASMSTFQESPVLPHPEPPSLPITQPLPLPQTLPQGQSPAQHPSLLTAQLPSPLFQIGNCGVCFHKSQNEAPSLTPSEINHLEWNVLQKNQESVWGLPSVVQKSQEDICSPAPSPSLVKSFKACCPISIIPGDFPFSAELRKKLEHHLRKRLIQHRWGLPRRVHESLSLLRPQSPTLEISESENSEGPLHSSLVEGQSHNDLKNFKSRKPRSFHKRSSNMLSLENVRKFQEYSQENGPKDHLLHEPETSSEEDLRANSESDLEGPMMHLPGNDSGVNLGQKQLANALSIHLSKKFEEINKGRVPMSVHSSGHSIKQTMSLPEKSHSQIKHQNLSASVGKDQCVDTSQEMSFLGSNKQKRLEAHIQSFHTRMLWGLPSKVLESIEICESKEDLSSSFSQLDLLSSATFISQRDSKDEVCKSLRFSTFQGEKLETRSVLVLDCPDPVTSPVGKERQGTLRRQFSYTDHDLTEMDSNDGASKLLGRNTTDFQGEKIGTTSLFSILNHPHLITSPVDKEKHGARRREFSDPDHELKESIQTTDDGRQSFLPHTHSIIDEVSQKQTVLAGRSNPEQPIMQPGVGNESMNKKARFSNNMERVQGSRKTCPVTSGSRKMFKEEKLKHQVLSELKLAQGEHSQAETHFTAMSLVLDNLSSKGLLTHAQSISSGNTATSQVLNVHVEDRGIRVKQQQEPSVPKHILQNCQVKNFPPATKRVSTPRVKGGELGGGNAGLGTSQPRRKSHPVQKKTSGEVLGRKSSPPLITQPPPENLFRKWMETFSQRFKKLSTTCEERESSQEKRSSLSSSVQNRGQIKNRAAFTGTPEAEKFNTDIVNFLKEKLGHRHGIDITCPQEPLSXPVKLTKAQHKPVLQGYPCNYTAPSCKVTHSKACSQPAILVGQNYPTRIRQITDKNRQPQKVEAFKSTILCQRHSXSMPHRKPVPQPNPTCQCQLDPVPPAIPTSAKTTMFSDLSLLITQXILLKHFQGGKFPPQ
SIO_010081: LOC100387089
subclass of: SO_0000673
so part of: LOC100387089
location: complement(join(12371492..12375772,12376037..12376097,12376700..12376745,12377495..12377683))
location: region:12371492-12377683:-1
so has part: feature:12377495-12377683:-1:exon
so has part: feature:12376700-12376745:-1:exon
so has part: feature:12376037-12376097:-1:exon
so has part: feature:12371492-12375772:-1:exon

XP_035138852.2
type: Protein
SIO_000068: ncbiprotein

position:12371492:-1
position: 12371492
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12377683:-1
position: 12377683
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12377495-12377683:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:12376700-12376745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:12376037-12376097:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:12371492-12375772:-1:exon

LOC118150029
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150029
note: U2 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(12505857..12505946)
location: region:12505857-12505946:-1
so has part: feature:12505857-12505946:-1:exon

118150029
type: Gene
SIO_000068: ncbigene

position:12505857:-1
position: 12505857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12505946:-1
position: 12505946
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12505857-12505946:-1:exon

LOC118150029
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC118150029
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00004
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC118150029
subclass of: SO_0000673
so part of: LOC118150029
location: complement(12505857..12505946)
location: region:12505857-12505946:-1
so has part: feature:12505857-12505946:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12505857-12505946:-1:exon

LOC100387451
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100387451
note: importin subunit alpha-1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 12600454..12602240
location: region:12600454-12602240:1
so has part: feature:12600454-12602240:1:exon

100387451
type: Gene
SIO_000068: ncbigene

position:12600454:1
position: 12600454
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:12602240:1
position: 12602240
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12600454-12602240:1:exon

LOC100387451
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9483
gene: LOC100387451
product: importin subunit alpha-1-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 17 Proteins
pseudo: true
transcript id: XR_008478259.1
SIO_010081: LOC100387451
so part of: LOC100387451
location: 12600454..12602240
location: region:12600454-12602240:1
so has part: feature:12600454-12602240:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:12600454-12602240:1:exon

LOC108589402
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC108589402
note: uncharacterized LOC108589402; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(12908384..13013348)
location: region:12908384-13013348:-1
so has part: feature:12908384-13013348:-1:exon
subclass of: SO_0000011

108589402
type: Gene
SIO_000068: ncbigene

position:12908384:-1
position: 12908384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13013348:-1
position: 13013348
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:12908384-13013348:-1:exon

LOC108589402
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC108589402
product: uncharacterized LOC108589402
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_001908625.2
SIO_010081: LOC108589402
subclass of: SO_0000673
so part of: LOC108589402
location: complement(join(12908384..12908596,13013289..13013348))
location: region:12908384-13013348:-1
so has part: feature:13013289-13013348:-1:exon
so has part: feature:12908384-12908596:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13013289-13013348:-1:exon

position:13013289:-1
position: 13013289
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:12908384-12908596:-1:exon

position:12908596:-1
position: 12908596
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118150042
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118150042
note: U4 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(13123253..13123389)
location: region:13123253-13123389:-1
so has part: feature:13123253-13123389:-1:exon
subclass of: SO_0000623

118150042
type: Gene
SIO_000068: ncbigene

position:13123253:-1
position: 13123253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13123389:-1
position: 13123389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13123253-13123389:-1:exon

LOC118150042
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118150042
product: U4 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00015
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737803.1
SIO_010081: LOC118150042
subclass of: SO_0000673
so part of: LOC118150042
location: complement(13123253..13123389)
location: region:13123253-13123389:-1
so has part: feature:13123253-13123389:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13123253-13123389:-1:exon

LOC118149917
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149917
note: uncharacterized LOC118149917; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13270236..13293505)
location: region:13270236-13293505:-1
so has part: feature:13270236-13293505:-1:exon
subclass of: SO_0000011

118149917
type: Gene
SIO_000068: ncbigene

position:13270236:-1
position: 13270236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13293505:-1
position: 13293505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13270236-13293505:-1:exon

LOC118149917
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149917
product: uncharacterized LOC118149917
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737672.2
SIO_010081: LOC118149917
subclass of: SO_0000673
so part of: LOC118149917
location: complement(join(13270236..13271207,13290257..13290309,13293355..13293505))
location: region:13270236-13293505:-1
so has part: feature:13293355-13293505:-1:exon
so has part: feature:13290257-13290309:-1:exon
so has part: feature:13270236-13271207:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13293355-13293505:-1:exon

position:13293355:-1
position: 13293355
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13290257-13290309:-1:exon

position:13290257:-1
position: 13290257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13290309:-1
position: 13290309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13270236-13271207:-1:exon

position:13271207:-1
position: 13271207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC128930382
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930382
note: heterogeneous nuclear ribonucleoprotein A1-like; Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(13605207..13606422)
location: region:13605207-13606422:-1
so has part: feature:13605207-13606422:-1:exon

128930382
type: Gene
SIO_000068: ncbigene

position:13605207:-1
position: 13605207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13606422:-1
position: 13606422
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13605207-13606422:-1:exon

LOC128930382
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC128930382
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC128930382
subclass of: SO_0000673
so part of: LOC128930382
location: complement(13605207..13605515)
location: region:13605207-13605515:-1
so has part: feature:13605207-13605515:-1:exon

position:13605515:-1
position: 13605515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13605207-13605515:-1:exon

LOC128930382
type: Exon
subclass of: SO_0000147
RO_0002162: 9483
gene: LOC128930382
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
pseudo: true
SIO_010081: LOC128930382
subclass of: SO_0000673
so part of: LOC128930382
location: complement(13606098..13606422)
location: region:13606098-13606422:-1
so has part: feature:13606098-13606422:-1:exon

position:13606098:-1
position: 13606098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13606098-13606422:-1:exon

LOC118149885
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149885
note: uncharacterized LOC118149885; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(13853130..13872197)
location: region:13853130-13872197:-1
so has part: feature:13853130-13872197:-1:exon
subclass of: SO_0000011

118149885
type: Gene
SIO_000068: ncbigene

position:13853130:-1
position: 13853130
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13872197:-1
position: 13872197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:13853130-13872197:-1:exon

LOC118149885
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC118149885
product: uncharacterized LOC118149885
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_004737631.1
SIO_010081: LOC118149885
subclass of: SO_0000673
so part of: LOC118149885
location: complement(join(13853130..13853291,13870878..13871008,13872112..13872197))
location: region:13853130-13872197:-1
so has part: feature:13872112-13872197:-1:exon
so has part: feature:13870878-13871008:-1:exon
so has part: feature:13853130-13853291:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:13872112-13872197:-1:exon

position:13872112:-1
position: 13872112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:13870878-13871008:-1:exon

position:13870878:-1
position: 13870878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:13871008:-1
position: 13871008
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:13853130-13853291:-1:exon

position:13853291:-1
position: 13853291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO1
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: ROBO1
note: roundabout guidance receptor 1; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 14019357..15171256
location: region:14019357-15171256:1
so has part: feature:14019357-15171256:1:exon
subclass of: SO_0000010

100387812
type: Gene
SIO_000068: ncbigene

position:14019357:1
position: 14019357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15171256:1
position: 15171256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14019357-15171256:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248986.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14019357..14019700,14178877..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14019357-15171256:1
so has part: feature:14019357-14019700:1:exon
so has part: feature:14178877-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15131067-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15171256:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:14019357-14019700:1:exon

position:14019700:1
position: 14019700
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14178877-14179013:1:exon

position:14178877:1
position: 14178877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14179013:1
position: 14179013
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:14659161-14659244:1:exon

position:14659161:1
position: 14659161
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14659244:1
position: 14659244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:14832453-14832779:1:exon

position:14832453:1
position: 14832453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:14832779:1
position: 14832779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:15026182-15026339:1:exon

position:15026182:1
position: 15026182
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15026339:1
position: 15026339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:15057392-15057512:1:exon

position:15057392:1
position: 15057392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15057512:1
position: 15057512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:15057863-15058001:1:exon

position:15057863:1
position: 15057863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15058001:1
position: 15058001
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:15060676-15060803:1:exon

position:15060676:1
position: 15060676
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15060803:1
position: 15060803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:15085035-15085159:1:exon

position:15085035:1
position: 15085035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15085159:1
position: 15085159
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:15087596-15087767:1:exon

position:15087596:1
position: 15087596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15087767:1
position: 15087767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:15096357-15096562:1:exon

position:15096357:1
position: 15096357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15096562:1
position: 15096562
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:15098089-15098170:1:exon

position:15098089:1
position: 15098089
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15098170:1
position: 15098170
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:15098353-15098521:1:exon

position:15098353:1
position: 15098353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15098521:1
position: 15098521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:15098606-15098772:1:exon

position:15098606:1
position: 15098606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15098772:1
position: 15098772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:15105600-15105721:1:exon

position:15105600:1
position: 15105600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15105721:1
position: 15105721
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:15106822-15107053:1:exon

position:15106822:1
position: 15106822
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15107053:1
position: 15107053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:15108267-15108388:1:exon

position:15108267:1
position: 15108267
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15108388:1
position: 15108388
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:15110101-15110272:1:exon

position:15110101:1
position: 15110101
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15110272:1
position: 15110272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:15115118-15115315:1:exon

position:15115118:1
position: 15115118
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15115315:1
position: 15115315
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:15119163-15119189:1:exon

position:15119163:1
position: 15119163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15119189:1
position: 15119189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:15120554-15120596:1:exon

position:15120554:1
position: 15120554
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15120596:1
position: 15120596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:15127268-15127422:1:exon

position:15127268:1
position: 15127268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15127422:1
position: 15127422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:15131067-15131237:1:exon

position:15131067:1
position: 15131067
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15131237:1
position: 15131237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:15132948-15133055:1:exon

position:15132948:1
position: 15132948
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15133055:1
position: 15133055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:15135630-15135774:1:exon

position:15135630:1
position: 15135630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15135774:1
position: 15135774
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:15140052-15140300:1:exon

position:15140052:1
position: 15140052
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15140300:1
position: 15140300
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:15149787-15150193:1:exon

position:15149787:1
position: 15149787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15150193:1
position: 15150193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:15153295-15153447:1:exon

position:15153295:1
position: 15153295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15153447:1
position: 15153447
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:15161150-15161458:1:exon

position:15161150:1
position: 15161150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15161458:1
position: 15161458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:15167772-15167968:1:exon

position:15167772:1
position: 15167772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15167968:1
position: 15167968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:15169559-15171256:1:exon

position:15169559:1
position: 15169559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_002761303.6
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14019396..14019700,14178877..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14019396-15171256:1
so has part: feature:14019396-14019700:1:exon
so has part: feature:14178877-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15171256:1:exon

position:14019396:1
position: 14019396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14019396-14019700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14178877-14179013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15130902-15131237:1:exon

position:15130902:1
position: 15130902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248987.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14019399..14019700,14178877..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14019399-15171256:1
so has part: feature:14019399-14019700:1:exon
so has part: feature:14178877-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15131067-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15171256:1:exon

position:14019399:1
position: 14019399
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14019399-14019700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14178877-14179013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15131067-15131237:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248984.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14019401..14019700,14178877..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14019401-15171256:1
so has part: feature:14019401-14019700:1:exon
so has part: feature:14178877-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15171256:1:exon

position:14019401:1
position: 14019401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14019401-14019700:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14178877-14179013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248983.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14019861..14019990,14178877..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14019861-15171256:1
so has part: feature:14019861-14019990:1:exon
so has part: feature:14178877-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15171256:1:exon

position:14019861:1
position: 14019861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14019861-14019990:1:exon

position:14019990:1
position: 14019990
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14178877-14179013:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X1
translation: MKWKHVPFLVIISLLSLSPNHLLLAQLIPDPEDLERGNDHGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14178926..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14178926-15169573:1
so has part: feature:14178926-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_002761349.2
type: Protein
SIO_000068: ncbiprotein

position:14178926:1
position: 14178926
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15169573:1
position: 15169573
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14178926-14179013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X1
translation: MKWKHVPFLVIISLLSLSPNHLLLAQLIPDPEDLERGNDHGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14178926..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14178926-15169573:1
so has part: feature:14178926-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_054104958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14178926-14179013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X6
translation: MKWKHVPFLVIISLLSLSPNHLLLAQLIPDPEDLERGNDHGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14178926..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14178926-15169573:1
so has part: feature:14178926-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15131067-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_054104961.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14178926-14179013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15131067-15131237:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X2
translation: MKWKHVPFLVIISLLSLSPNHLLLAQLIPDPEDLERGNDHGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14178926..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14178926-15169573:1
so has part: feature:14178926-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_054104959.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14178926-14179013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X7
translation: MKWKHVPFLVIISLLSLSPNHLLLAQLIPDPEDLERGNDHGTPIPTSDNDDNSLGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14178926..14179013,14659161..14659244,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14178926-15169573:1
so has part: feature:14178926-14179013:1:exon
so has part: feature:14659161-14659244:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15131067-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_054104962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14178926-14179013:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14659161-14659244:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15131067-15131237:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248985.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14377779..14378344,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14377779-15171256:1
so has part: feature:14377779-14378344:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15171256:1:exon

position:14377779:1
position: 14377779
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14377779-14378344:1:exon

position:14378344:1
position: 14378344
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X3
translation: MAVLLLMLLLSMAEITSPVGVSDRTKAGSRWKGEKNRSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14378236..14378344,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14378236-15169573:1
so has part: feature:14378236-14378344:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_054104960.1
type: Protein
SIO_000068: ncbiprotein

position:14378236:1
position: 14378236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14378236-14378344:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986473.4
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
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position:14751943:1
position: 14751943
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14751943-14753246:1:exon

position:14753246:1
position: 14753246
reference: sequence
type: ForwardStrandPosition
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urn:…
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urn:…
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urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282829.2
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14751943..14753246,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14751943-15171256:1
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urn:…
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urn:…
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urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_035282828.2
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14751943..14753246,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14751943-15171256:1
so has part: feature:14751943-14753246:1:exon
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 28
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO1
product: roundabout guidance receptor 1, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248988.1
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14751943..14753246,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15171256)
location: region:14751943-15171256:1
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urn:…
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urn:…
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SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15169559-15171256:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X4
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14753192..14753246,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14753192-15169573:1
so has part: feature:14753192-14753246:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_008984721.2
type: Protein
SIO_000068: ncbiprotein

position:14753192:1
position: 14753192
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:14753192-14753246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X8
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14753192..14753246,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15119163..15119189,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14753192-15169573:1
so has part: feature:14753192-14753246:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15119163-15119189:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15131067-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_035138720.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14753192-14753246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15119163-15119189:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15131067-15131237:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X5
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPADCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14753192..14753246,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15130902..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14753192-15169573:1
so has part: feature:14753192-14753246:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15130902-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_035138719.2
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14753192-14753246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15130902-15131237:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15169559-15169573:1:exon

ROBO1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: ROBO1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: roundabout homolog 1 isoform X9
translation: MIAEPAHFYLFGLICLCSGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKAGERVETDKDEPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDGELPKSRYEIRDDHTLKIRKVMAADMGSYTCVAENMVGKAEASATLTVQEPPHFVVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENGVLQVRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTSYIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVKTQDVPPTSQGVDHKQVQRELGNVVLHLHNPTILSSSSVEVHWTVDQQSQYIQGYKILYRPSGARHGESEWLVFEVRTPTKNSVIISDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEEAPSAPPQGVTVSKNDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGSTFSVVIPFLVPGIRYSVEVAASTGAGPGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDVVKQPAFIAGIGAACWIILMLFSVWLYRHRKKRNGLTSTYAGIRKVTYQRGGEAVSSGGRPGLLNISEPTTQPWLADTWPNTGNNHNDCSISCCAAGNGNSDSNLTTYSRPGQPTPYATTQLIQPNLSNNMNSGSGDSGEKHWKPLGQQKPEVAPVQYNIMEQNKLNKDYRANDTIPPTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPAHPPPHSNSEEYNISVDESYDQEMPCPVPPARMYLQQDELEEEEDERGPTPPVRGAASSPAAVSYSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLVSDMDTDAPEEEEDEADMEVAKMQTRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVMQKTRPAKKQKHQPGHLRREAYTDDLPPPPVPPPAIKSPTVPSKTQLEVRPVVVPKLPSIDARTDRSSDRKGSNYKGRDMLDGRQVVDMRTNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFPTSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLAGYERGEDNNEELEETES
SIO_010081: ROBO1
subclass of: SO_0000673
so part of: ROBO1
location: join(14753192..14753246,14832453..14832779,15026182..15026339,15057392..15057512,15057863..15058001,15060676..15060803,15085035..15085159,15087596..15087767,15096357..15096562,15098089..15098170,15098353..15098521,15098606..15098772,15105600..15105721,15106822..15107053,15108267..15108388,15110101..15110272,15115118..15115315,15120554..15120596,15127268..15127422,15131067..15131237,15132948..15133055,15135630..15135774,15140052..15140300,15149787..15150193,15153295..15153447,15161150..15161458,15167772..15167968,15169559..15169573)
location: region:14753192-15169573:1
so has part: feature:14753192-14753246:1:exon
so has part: feature:14832453-14832779:1:exon
so has part: feature:15026182-15026339:1:exon
so has part: feature:15057392-15057512:1:exon
so has part: feature:15057863-15058001:1:exon
so has part: feature:15060676-15060803:1:exon
so has part: feature:15085035-15085159:1:exon
so has part: feature:15087596-15087767:1:exon
so has part: feature:15096357-15096562:1:exon
so has part: feature:15098089-15098170:1:exon
so has part: feature:15098353-15098521:1:exon
so has part: feature:15098606-15098772:1:exon
so has part: feature:15105600-15105721:1:exon
so has part: feature:15106822-15107053:1:exon
so has part: feature:15108267-15108388:1:exon
so has part: feature:15110101-15110272:1:exon
so has part: feature:15115118-15115315:1:exon
so has part: feature:15120554-15120596:1:exon
so has part: feature:15127268-15127422:1:exon
so has part: feature:15131067-15131237:1:exon
so has part: feature:15132948-15133055:1:exon
so has part: feature:15135630-15135774:1:exon
so has part: feature:15140052-15140300:1:exon
so has part: feature:15149787-15150193:1:exon
so has part: feature:15153295-15153447:1:exon
so has part: feature:15161150-15161458:1:exon
so has part: feature:15167772-15167968:1:exon
so has part: feature:15169559-15169573:1:exon

XP_054104963.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:14753192-14753246:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:14832453-14832779:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:15026182-15026339:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:15057392-15057512:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:15057863-15058001:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:15060676-15060803:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:15085035-15085159:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:15087596-15087767:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:15096357-15096562:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:15098089-15098170:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:15098353-15098521:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:15098606-15098772:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:15105600-15105721:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:15106822-15107053:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:15108267-15108388:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:15110101-15110272:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:15115118-15115315:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:15120554-15120596:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:15127268-15127422:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:15131067-15131237:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:15132948-15133055:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:15135630-15135774:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:15140052-15140300:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:15149787-15150193:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:15153295-15153447:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:15161150-15161458:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:15167772-15167968:1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:15169559-15169573:1:exon

LOC100391071
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC100391071
note: fas-activated serine/threonine kinase-like; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 15631695..15633472
location: region:15631695-15633472:1
so has part: feature:15631695-15633472:1:exon
subclass of: SO_0000010

100391071
type: Gene
SIO_000068: ncbigene

position:15631695:1
position: 15631695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15633472:1
position: 15633472
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15631695-15633472:1:exon

LOC100391071
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: LOC100391071
product: fas-activated serine/threonine kinase-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 1 Protein
transcript id: XM_035283001.2
SIO_010081: LOC100391071
subclass of: SO_0000673
so part of: LOC100391071
location: 15631695..15633472
location: region:15631695-15633472:1
so has part: feature:15631695-15633472:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15631695-15633472:1:exon

LOC100391071
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9483
gene: LOC100391071
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: fas-activated serine/threonine kinase-like
translation: MQGLQWLLEQARSPGELLRWLDQNPTKVHAHHYPVVLHRLGQLLGSRPRPPPVEQATLQDFSQLIIRNCPAFDMHTIHVCLHLAVLLGFPSDGPLTCALEQERRLRLPPKPPPPLSSLLLGGQRLEAALSCPRFLRYPLQHLISSRAETRPEELPPHVMVLLARHLARHLAQHLAQHVGRHRLREPQFLEAIARFLVVQENQLSSKVVQKLVLPFGRLNYLPLEQQFMPCLERILAREAGVAPLATVNILMSLCQLRGLPFRALHFVFSPGFINYISGTPHALIVRRYLSLLDTAVELELPGYRGPRLPRRQQVPIFLQPLITDHARCKYSHKDTVAEGLRQLLGEEKYRQDLTVPPGHCTDFLLCVGSSGAVLPVRTQDPFLPYPPRPCPQGQAACSXTTRDPAQRVVLVLRECWHFCRDGRELLGSRALRERHLGLVGYQLLPLPFEELECQRGLRQLKSYLRQKLQALGLRWGPEGR
SIO_010081: LOC100391071
subclass of: SO_0000673
so part of: LOC100391071
location: 15631933..15633374
location: region:15631933-15633374:1
so has part: feature:15631933-15633374:1:exon

XP_035138892.2
type: Protein
SIO_000068: ncbiprotein

position:15631933:1
position: 15631933
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15633374:1
position: 15633374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15631933-15633374:1:exon

LOC128930337
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC128930337
note: uncharacterized LOC128930337; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(15730399..15737013)
location: region:15730399-15737013:-1
so has part: feature:15730399-15737013:-1:exon
subclass of: SO_0000011

128930337
type: Gene
SIO_000068: ncbigene

position:15730399:-1
position: 15730399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15737013:-1
position: 15737013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15730399-15737013:-1:exon

LOC128930337
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: lncRNA
gene: LOC128930337
product: uncharacterized LOC128930337
note: Derived by automated computational analysis using gene prediction method: Gnomon.
transcript id: XR_008478279.1
SIO_010081: LOC128930337
subclass of: SO_0000673
so part of: LOC128930337
location: complement(join(15730399..15731334,15731606..15731721,15736760..15737013))
location: region:15730399-15737013:-1
so has part: feature:15736760-15737013:-1:exon
so has part: feature:15731606-15731721:-1:exon
so has part: feature:15730399-15731334:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15736760-15737013:-1:exon

position:15736760:-1
position: 15736760
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:15731606-15731721:-1:exon

position:15731606:-1
position: 15731606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:15731721:-1
position: 15731721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:15730399-15731334:-1:exon

position:15731334:-1
position: 15731334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC118149989
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: LOC118149989
note: U6 spliceosomal RNA; Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: 15920393..15920496
location: region:15920393-15920496:1
so has part: feature:15920393-15920496:1:exon
subclass of: SO_0000623

118149989
type: Gene
SIO_000068: ncbigene

position:15920393:1
position: 15920393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:15920496:1
position: 15920496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:15920393-15920496:1:exon

LOC118149989
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9483
nc RNA class: snRNA
gene: LOC118149989
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:14.6:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.4
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_004737759.1
SIO_010081: LOC118149989
subclass of: SO_0000673
so part of: LOC118149989
location: 15920393..15920496
location: region:15920393-15920496:1
so has part: feature:15920393-15920496:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:15920393-15920496:1:exon

ROBO2
type: Gene
subclass of: SO_0000704
RO_0002162: 9483
gene: ROBO2
note: roundabout guidance receptor 2; Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(16064520..16665655)
location: region:16064520-16665655:-1
so has part: feature:16064520-16665655:-1:exon
subclass of: SO_0000010

100388667
type: Gene
SIO_000068: ncbigene

position:16064520:-1
position: 16064520
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16665655:-1
position: 16665655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16064520-16665655:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248955.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16071913..16072185,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111366..16111491,16111907..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665655))
location: region:16064520-16665655:-1
so has part: feature:16664670-16665655:-1:exon
so has part: feature:16608861-16609187:-1:exon
so has part: feature:16243884-16244041:-1:exon
so has part: feature:16234244-16234364:-1:exon
so has part: feature:16222548-16222686:-1:exon
so has part: feature:16193530-16193657:-1:exon
so has part: feature:16189036-16189047:-1:exon
so has part: feature:16170121-16170245:-1:exon
so has part: feature:16165335-16165506:-1:exon
so has part: feature:16159310-16159515:-1:exon
so has part: feature:16155061-16155142:-1:exon
so has part: feature:16154453-16154615:-1:exon
so has part: feature:16152666-16152832:-1:exon
so has part: feature:16149118-16149239:-1:exon
so has part: feature:16142462-16142693:-1:exon
so has part: feature:16139240-16139364:-1:exon
so has part: feature:16136757-16136928:-1:exon
so has part: feature:16126202-16126384:-1:exon
so has part: feature:16120270-16120312:-1:exon
so has part: feature:16118694-16118821:-1:exon
so has part: feature:16111907-16112179:-1:exon
so has part: feature:16111366-16111491:-1:exon
so has part: feature:16106523-16106679:-1:exon
so has part: feature:16096779-16097039:-1:exon
so has part: feature:16091775-16091980:-1:exon
so has part: feature:16081608-16081790:-1:exon
so has part: feature:16079219-16079392:-1:exon
so has part: feature:16071913-16072185:-1:exon
so has part: feature:16069976-16070176:-1:exon
so has part: feature:16064520-16068385:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:16664670-16665655:-1:exon

position:16664670:-1
position: 16664670
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:16608861-16609187:-1:exon

position:16608861:-1
position: 16608861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16609187:-1
position: 16609187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:16243884-16244041:-1:exon

position:16243884:-1
position: 16243884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16244041:-1
position: 16244041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:16234244-16234364:-1:exon

position:16234244:-1
position: 16234244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16234364:-1
position: 16234364
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:16222548-16222686:-1:exon

position:16222548:-1
position: 16222548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:16222686:-1
position: 16222686
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:16193530-16193657:-1:exon

position:16193530:-1
position: 16193530
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position:16193657:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:16189036-16189047:-1:exon

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position:16189047:-1
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urn:…
SIO_000300: 8
SIO_000628: feature:16170121-16170245:-1:exon

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position:16170245:-1
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urn:…
SIO_000300: 9
SIO_000628: feature:16165335-16165506:-1:exon

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position:16165506:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:16159310-16159515:-1:exon

position:16159310:-1
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position:16159515:-1
position: 16159515
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urn:…
SIO_000300: 11
SIO_000628: feature:16155061-16155142:-1:exon

position:16155061:-1
position: 16155061
reference: sequence
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position:16155142:-1
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urn:…
SIO_000300: 12
SIO_000628: feature:16154453-16154615:-1:exon

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position:16154615:-1
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urn:…
SIO_000300: 13
SIO_000628: feature:16152666-16152832:-1:exon

position:16152666:-1
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position:16152832:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:16149118-16149239:-1:exon

position:16149118:-1
position: 16149118
reference: sequence
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position:16149239:-1
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urn:…
SIO_000300: 15
SIO_000628: feature:16142462-16142693:-1:exon

position:16142462:-1
position: 16142462
reference: sequence
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position:16142693:-1
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urn:…
SIO_000300: 16
SIO_000628: feature:16139240-16139364:-1:exon

position:16139240:-1
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position:16139364:-1
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urn:…
SIO_000300: 17
SIO_000628: feature:16136757-16136928:-1:exon

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position:16136928:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:16126202-16126384:-1:exon

position:16126202:-1
position: 16126202
reference: sequence
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position:16126384:-1
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urn:…
SIO_000300: 19
SIO_000628: feature:16120270-16120312:-1:exon

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reference: sequence
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position:16120312:-1
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urn:…
SIO_000300: 20
SIO_000628: feature:16118694-16118821:-1:exon

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position:16118821:-1
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urn:…
SIO_000300: 21
SIO_000628: feature:16111907-16112179:-1:exon

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position: 16111907
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position:16112179:-1
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urn:…
SIO_000300: 22
SIO_000628: feature:16111366-16111491:-1:exon

position:16111366:-1
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position:16111491:-1
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urn:…
SIO_000300: 23
SIO_000628: feature:16106523-16106679:-1:exon

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position:16106679:-1
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urn:…
SIO_000300: 24
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position:16097039:-1
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urn:…
SIO_000300: 25
SIO_000628: feature:16091775-16091980:-1:exon

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position:16091980:-1
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urn:…
SIO_000300: 26
SIO_000628: feature:16081608-16081790:-1:exon

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position:16081790:-1
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urn:…
SIO_000300: 27
SIO_000628: feature:16079219-16079392:-1:exon

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position:16079392:-1
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urn:…
SIO_000300: 28
SIO_000628: feature:16071913-16072185:-1:exon

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position:16072185:-1
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urn:…
SIO_000300: 29
SIO_000628: feature:16069976-16070176:-1:exon

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reference: sequence
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position:16070176:-1
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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:16064520-16068385:-1:exon

position:16068385:-1
position: 16068385
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248954.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
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urn:…
SIO_000300: 1
SIO_000628: feature:16664670-16665655:-1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 7
SIO_000628: feature:16189036-16189047:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16170121-16170245:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16165335-16165506:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16159310-16159515:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16155061-16155142:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16154453-16154615:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16152666-16152832:-1:exon

urn:…
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SIO_000628: feature:16149118-16149239:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16142462-16142693:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16139240-16139364:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:16136757-16136928:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:16126202-16126384:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16120270-16120312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:16118694-16118821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:16111898-16112179:-1:exon

position:16111898:-1
position: 16111898
reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:16111366-16111491:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16106523-16106679:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16096779-16097039:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16091775-16091980:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16081608-16081790:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16079219-16079392:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16071913-16072185:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:16069985-16070176:-1:exon

position:16069985:-1
position: 16069985
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 30
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248956.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16071913..16072185,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111366..16111491,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665654))
location: region:16064520-16665654:-1
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so has part: feature:16069976-16070176:-1:exon
so has part: feature:16064520-16068385:-1:exon

position:16665654:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16664670-16665654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16608861-16609187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16243884-16244041:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:16234244-16234364:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:16222548-16222686:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:16193530-16193657:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:16170121-16170245:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:16165335-16165506:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:16159310-16159515:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:16155061-16155142:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:16154453-16154615:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:16152666-16152832:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:16149118-16149239:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:16142462-16142693:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:16139240-16139364:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:16136757-16136928:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:16126202-16126384:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:16120270-16120312:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16118694-16118821:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:16111898-16112179:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:16111366-16111491:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:16106523-16106679:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16096779-16097039:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16091775-16091980:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16081608-16081790:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16079219-16079392:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16071913-16072185:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16069976-16070176:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X6
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248958.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16071913..16072185,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111907..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665654))
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urn:…
SIO_000300: 1
SIO_000628: feature:16664670-16665654:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:16608861-16609187:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:16243884-16244041:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 10
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urn:…
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urn:…
SIO_000300: 12
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urn:…
SIO_000300: 13
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 18
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urn:…
SIO_000300: 19
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urn:…
SIO_000300: 20
SIO_000628: feature:16118694-16118821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:16111907-16112179:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:16106523-16106679:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16096779-16097039:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16091775-16091980:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16081608-16081790:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16079219-16079392:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16071913-16072185:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16069976-16070176:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_008986475.4
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16071913..16072185,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111366..16111491,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665654))
location: region:16064520-16665654:-1
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urn:…
SIO_000300: 1
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urn:…
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urn:…
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urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
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urn:…
SIO_000300: 6
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urn:…
SIO_000300: 7
SIO_000628: feature:16189036-16189047:-1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 10
SIO_000628: feature:16159310-16159515:-1:exon

urn:…
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urn:…
SIO_000300: 12
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:16126202-16126384:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:16120270-16120312:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:16118694-16118821:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:16111898-16112179:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:16111366-16111491:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:16106523-16106679:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16096779-16097039:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16091775-16091980:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16081608-16081790:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16079219-16079392:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16071913-16072185:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:16069976-16070176:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X5
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248957.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16071913..16072185,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665652))
location: region:16064520-16665652:-1
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position:16665652:-1
position: 16665652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16664670-16665652:-1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 24
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 28
SIO_000628: feature:16069976-16070176:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X10
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248962.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069985..16070176,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111366..16111491,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665651))
location: region:16064520-16665651:-1
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position:16665651:-1
position: 16665651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:16664670-16665651:-1:exon

urn:…
SIO_000300: 2
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 29
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X9
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248961.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111366..16111491,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665651))
location: region:16064520-16665651:-1
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urn:…
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urn:…
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urn:…
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SIO_000300: 20
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SIO_000300: 21
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
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urn:…
SIO_000300: 25
SIO_000628: feature:16091775-16091980:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16081608-16081790:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16079219-16079392:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16069976-16070176:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X13
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_002761307.5
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16079219..16079392,16081608..16081790,16091775..16091980,16096779..16097039,16106523..16106679,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665649))
location: region:16064520-16665649:-1
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position:16665649:-1
position: 16665649
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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SIO_000628: feature:16664670-16665649:-1:exon

urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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urn:…
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SIO_000628: feature:16155061-16155142:-1:exon

urn:…
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urn:…
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SIO_000628: feature:16152666-16152832:-1:exon

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urn:…
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urn:…
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urn:…
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SIO_000628: feature:16096779-16097039:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:16091775-16091980:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:16081608-16081790:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:16079219-16079392:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:16069976-16070176:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X8
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248960.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16071913..16072185,16079219..16079392,16091775..16091980,16096779..16097039,16106523..16106679,16111366..16111491,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665648))
location: region:16064520-16665648:-1
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position:16665648:-1
position: 16665648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
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urn:…
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urn:…
SIO_000300: 27
SIO_000628: feature:16069976-16070176:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:16064520-16068385:-1:exon

ROBO2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9483
gene: ROBO2
product: roundabout guidance receptor 2, transcript variant X7
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_054248959.1
SIO_010081: ROBO2
subclass of: SO_0000673
so part of: ROBO2
location: complement(join(16064520..16068385,16069976..16070176,16071913..16072185,16079219..16079392,16091775..16091980,16096779..16097039,16106523..16106679,16111366..16111491,16111898..16112179,16118694..16118821,16120270..16120312,16126202..16126384,16136757..16136928,16139240..16139364,16142462..16142693,16149118..16149239,16152666..16152832,16154453..16154615,16155061..16155142,16159310..16159515,16165335..16165506,16170121..16170245,16189036..16189047,16193530..16193657,16222548..16222686,16234244..16234364,16243884..16244041,16608861..16609187,16664670..16665648))
location: region:16064520-16665648:-1
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urn:…
SIO_000300: 1
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urn:…
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