Lemur catta isolate mLemCat1 chromosome Y, mLemCat1.pri, whole genome shotgun sequence.
type: Entry
definition: Lemur catta isolate mLemCat1 chromosome Y, mLemCat1.pri, whole genome shotgun sequence.
sequence version: NC_059156.1
sequence date: 2021-12-21
sequence: sequence
division: CON
label: NC_059156.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA779062
dblink: SAMN12621102
keyword: WGS
keyword: RefSeq
source: Lemur catta (Ring-tailed lemur)
organism: Lemur catta
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM036500.1.\nAssembly name: mLemCat1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGPY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JUL-2021\nAssembly Method :: hifiasm v. 0.12-r304; purge_dups v.\n 1.2.5; bionano_solve v.\n Solve3.6.1_11162020; salsa2 v. v2.2;\n gEVAL manual curation v. 2021-07-16\nAssembly Name :: mLemCat1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 20.81x\nSequencing Technology :: Pacbio Sequel II CCS; 10X Genomics linked\n reads; Bionano Genomics DLS; Arima\n Genomics v1 Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lemur catta Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000340
sequence length: 6804709
topology: linear
so has quality: SO_0000987
location: 1..6804709
location: region:1-6804709:1
RO_0002162: 9447

NC_059156
type: RefSeq
SIO_000068: refseq

PRJNA779062
type: BioProject
SIO_000068: bioproject

SAMN12621102
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:6804709:1
position: 6804709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-6804709:1:source
so part of: sequence
organism: Lemur catta
mol type: genomic DNA
isolate: mLemCat1
chromosome: Y
sex: male
tissue type: spleen
dev stage: juvenile
country: Denmark: Copenhagen Zoo
lat lon: 55.67278 N 12.52139 E
collection date: 2015-12-16
collected by: Mads Bertelsen

9447
type: Taxonomy
SIO_000068: taxonomy

LOC123629111
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629111
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(5903..5994)
location: region:5903-5994:-1
so has part: feature:5903-5994:-1:exon

123629111
type: Gene
SIO_000068: ncbigene

position:5903:-1
position: 5903
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:5994:-1
position: 5994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:5903-5994:-1:exon

LOC123629111
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629111
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629111
subclass of: SO_0000673
so part of: LOC123629111
location: complement(5903..5994)
location: region:5903-5994:-1
so has part: feature:5903-5994:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:5903-5994:-1:exon

LOC123629112
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629112
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(11939..12030)
location: region:11939-12030:-1
so has part: feature:11939-12030:-1:exon

123629112
type: Gene
SIO_000068: ncbigene

position:11939:-1
position: 11939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:12030:-1
position: 12030
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11939-12030:-1:exon

LOC123629112
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629112
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629112
subclass of: SO_0000673
so part of: LOC123629112
location: complement(11939..12030)
location: region:11939-12030:-1
so has part: feature:11939-12030:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:11939-12030:-1:exon

LOC123629113
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629113
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(17967..18058)
location: region:17967-18058:-1
so has part: feature:17967-18058:-1:exon

123629113
type: Gene
SIO_000068: ncbigene

position:17967:-1
position: 17967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:18058:-1
position: 18058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:17967-18058:-1:exon

LOC123629113
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629113
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629113
subclass of: SO_0000673
so part of: LOC123629113
location: complement(17967..18058)
location: region:17967-18058:-1
so has part: feature:17967-18058:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:17967-18058:-1:exon

LOC123629114
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629114
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(23972..24063)
location: region:23972-24063:-1
so has part: feature:23972-24063:-1:exon

123629114
type: Gene
SIO_000068: ncbigene

position:23972:-1
position: 23972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:24063:-1
position: 24063
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:23972-24063:-1:exon

LOC123629114
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629114
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629114
subclass of: SO_0000673
so part of: LOC123629114
location: complement(23972..24063)
location: region:23972-24063:-1
so has part: feature:23972-24063:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:23972-24063:-1:exon

LOC123629115
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629115
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(29998..30089)
location: region:29998-30089:-1
so has part: feature:29998-30089:-1:exon

123629115
type: Gene
SIO_000068: ncbigene

position:29998:-1
position: 29998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:30089:-1
position: 30089
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:29998-30089:-1:exon

LOC123629115
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629115
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629115
subclass of: SO_0000673
so part of: LOC123629115
location: complement(29998..30089)
location: region:29998-30089:-1
so has part: feature:29998-30089:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:29998-30089:-1:exon

LOC123629116
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629116
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(36027..36118)
location: region:36027-36118:-1
so has part: feature:36027-36118:-1:exon

123629116
type: Gene
SIO_000068: ncbigene

position:36027:-1
position: 36027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:36118:-1
position: 36118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:36027-36118:-1:exon

LOC123629116
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629116
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629116
subclass of: SO_0000673
so part of: LOC123629116
location: complement(36027..36118)
location: region:36027-36118:-1
so has part: feature:36027-36118:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:36027-36118:-1:exon

LOC123629117
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629117
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(42057..42148)
location: region:42057-42148:-1
so has part: feature:42057-42148:-1:exon

123629117
type: Gene
SIO_000068: ncbigene

position:42057:-1
position: 42057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:42148:-1
position: 42148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:42057-42148:-1:exon

LOC123629117
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629117
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629117
subclass of: SO_0000673
so part of: LOC123629117
location: complement(42057..42148)
location: region:42057-42148:-1
so has part: feature:42057-42148:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:42057-42148:-1:exon

LOC123629119
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629119
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(48091..48182)
location: region:48091-48182:-1
so has part: feature:48091-48182:-1:exon

123629119
type: Gene
SIO_000068: ncbigene

position:48091:-1
position: 48091
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:48182:-1
position: 48182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:48091-48182:-1:exon

LOC123629119
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629119
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629119
subclass of: SO_0000673
so part of: LOC123629119
location: complement(48091..48182)
location: region:48091-48182:-1
so has part: feature:48091-48182:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:48091-48182:-1:exon

LOC123629120
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629120
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(54108..54199)
location: region:54108-54199:-1
so has part: feature:54108-54199:-1:exon

123629120
type: Gene
SIO_000068: ncbigene

position:54108:-1
position: 54108
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:54199:-1
position: 54199
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:54108-54199:-1:exon

LOC123629120
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629120
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629120
subclass of: SO_0000673
so part of: LOC123629120
location: complement(54108..54199)
location: region:54108-54199:-1
so has part: feature:54108-54199:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:54108-54199:-1:exon

LOC123629121
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629121
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(60145..60236)
location: region:60145-60236:-1
so has part: feature:60145-60236:-1:exon

123629121
type: Gene
SIO_000068: ncbigene

position:60145:-1
position: 60145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:60236:-1
position: 60236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:60145-60236:-1:exon

LOC123629121
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629121
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629121
subclass of: SO_0000673
so part of: LOC123629121
location: complement(60145..60236)
location: region:60145-60236:-1
so has part: feature:60145-60236:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:60145-60236:-1:exon

LOC123629122
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629122
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(66180..66271)
location: region:66180-66271:-1
so has part: feature:66180-66271:-1:exon

123629122
type: Gene
SIO_000068: ncbigene

position:66180:-1
position: 66180
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66271:-1
position: 66271
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:66180-66271:-1:exon

LOC123629122
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629122
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629122
subclass of: SO_0000673
so part of: LOC123629122
location: complement(66180..66271)
location: region:66180-66271:-1
so has part: feature:66180-66271:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:66180-66271:-1:exon

LOC123629123
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629123
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(72222..72313)
location: region:72222-72313:-1
so has part: feature:72222-72313:-1:exon

123629123
type: Gene
SIO_000068: ncbigene

position:72222:-1
position: 72222
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:72313:-1
position: 72313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:72222-72313:-1:exon

LOC123629123
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629123
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629123
subclass of: SO_0000673
so part of: LOC123629123
location: complement(72222..72313)
location: region:72222-72313:-1
so has part: feature:72222-72313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:72222-72313:-1:exon

LOC123629124
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629124
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(78254..78345)
location: region:78254-78345:-1
so has part: feature:78254-78345:-1:exon

123629124
type: Gene
SIO_000068: ncbigene

position:78254:-1
position: 78254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:78345:-1
position: 78345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:78254-78345:-1:exon

LOC123629124
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629124
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629124
subclass of: SO_0000673
so part of: LOC123629124
location: complement(78254..78345)
location: region:78254-78345:-1
so has part: feature:78254-78345:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:78254-78345:-1:exon

LOC123629125
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629125
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(84281..84372)
location: region:84281-84372:-1
so has part: feature:84281-84372:-1:exon

123629125
type: Gene
SIO_000068: ncbigene

position:84281:-1
position: 84281
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84372:-1
position: 84372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:84281-84372:-1:exon

LOC123629125
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629125
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629125
subclass of: SO_0000673
so part of: LOC123629125
location: complement(84281..84372)
location: region:84281-84372:-1
so has part: feature:84281-84372:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:84281-84372:-1:exon

LOC123629126
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629126
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(90317..90408)
location: region:90317-90408:-1
so has part: feature:90317-90408:-1:exon

123629126
type: Gene
SIO_000068: ncbigene

position:90317:-1
position: 90317
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:90408:-1
position: 90408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:90317-90408:-1:exon

LOC123629126
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629126
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629126
subclass of: SO_0000673
so part of: LOC123629126
location: complement(90317..90408)
location: region:90317-90408:-1
so has part: feature:90317-90408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90317-90408:-1:exon

LOC123629127
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629127
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(96357..96448)
location: region:96357-96448:-1
so has part: feature:96357-96448:-1:exon

123629127
type: Gene
SIO_000068: ncbigene

position:96357:-1
position: 96357
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96448:-1
position: 96448
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:96357-96448:-1:exon

LOC123629127
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629127
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629127
subclass of: SO_0000673
so part of: LOC123629127
location: complement(96357..96448)
location: region:96357-96448:-1
so has part: feature:96357-96448:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96357-96448:-1:exon

LOC123629128
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629128
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(105387..105478)
location: region:105387-105478:-1
so has part: feature:105387-105478:-1:exon

123629128
type: Gene
SIO_000068: ncbigene

position:105387:-1
position: 105387
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:105478:-1
position: 105478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:105387-105478:-1:exon

LOC123629128
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629128
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629128
subclass of: SO_0000673
so part of: LOC123629128
location: complement(105387..105478)
location: region:105387-105478:-1
so has part: feature:105387-105478:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:105387-105478:-1:exon

LOC123629130
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629130
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(111410..111501)
location: region:111410-111501:-1
so has part: feature:111410-111501:-1:exon

123629130
type: Gene
SIO_000068: ncbigene

position:111410:-1
position: 111410
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:111501:-1
position: 111501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:111410-111501:-1:exon

LOC123629130
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629130
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629130
subclass of: SO_0000673
so part of: LOC123629130
location: complement(111410..111501)
location: region:111410-111501:-1
so has part: feature:111410-111501:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:111410-111501:-1:exon

LOC123629131
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629131
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(117447..117538)
location: region:117447-117538:-1
so has part: feature:117447-117538:-1:exon

123629131
type: Gene
SIO_000068: ncbigene

position:117447:-1
position: 117447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:117538:-1
position: 117538
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:117447-117538:-1:exon

LOC123629131
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629131
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629131
subclass of: SO_0000673
so part of: LOC123629131
location: complement(117447..117538)
location: region:117447-117538:-1
so has part: feature:117447-117538:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:117447-117538:-1:exon

LOC123629132
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629132
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(123470..123561)
location: region:123470-123561:-1
so has part: feature:123470-123561:-1:exon

123629132
type: Gene
SIO_000068: ncbigene

position:123470:-1
position: 123470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123561:-1
position: 123561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:123470-123561:-1:exon

LOC123629132
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629132
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629132
subclass of: SO_0000673
so part of: LOC123629132
location: complement(123470..123561)
location: region:123470-123561:-1
so has part: feature:123470-123561:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123470-123561:-1:exon

LOC123629133
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629133
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(129491..129582)
location: region:129491-129582:-1
so has part: feature:129491-129582:-1:exon

123629133
type: Gene
SIO_000068: ncbigene

position:129491:-1
position: 129491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:129582:-1
position: 129582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:129491-129582:-1:exon

LOC123629133
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629133
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629133
subclass of: SO_0000673
so part of: LOC123629133
location: complement(129491..129582)
location: region:129491-129582:-1
so has part: feature:129491-129582:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:129491-129582:-1:exon

LOC123629134
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629134
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(135523..135614)
location: region:135523-135614:-1
so has part: feature:135523-135614:-1:exon

123629134
type: Gene
SIO_000068: ncbigene

position:135523:-1
position: 135523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:135614:-1
position: 135614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:135523-135614:-1:exon

LOC123629134
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629134
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629134
subclass of: SO_0000673
so part of: LOC123629134
location: complement(135523..135614)
location: region:135523-135614:-1
so has part: feature:135523-135614:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:135523-135614:-1:exon

LOC123629135
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629135
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(141562..141653)
location: region:141562-141653:-1
so has part: feature:141562-141653:-1:exon

123629135
type: Gene
SIO_000068: ncbigene

position:141562:-1
position: 141562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141653:-1
position: 141653
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:141562-141653:-1:exon

LOC123629135
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629135
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629135
subclass of: SO_0000673
so part of: LOC123629135
location: complement(141562..141653)
location: region:141562-141653:-1
so has part: feature:141562-141653:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:141562-141653:-1:exon

LOC123629136
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629136
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(147593..147684)
location: region:147593-147684:-1
so has part: feature:147593-147684:-1:exon

123629136
type: Gene
SIO_000068: ncbigene

position:147593:-1
position: 147593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:147684:-1
position: 147684
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:147593-147684:-1:exon

LOC123629136
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629136
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629136
subclass of: SO_0000673
so part of: LOC123629136
location: complement(147593..147684)
location: region:147593-147684:-1
so has part: feature:147593-147684:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:147593-147684:-1:exon

LOC123629137
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629137
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(153622..153713)
location: region:153622-153713:-1
so has part: feature:153622-153713:-1:exon

123629137
type: Gene
SIO_000068: ncbigene

position:153622:-1
position: 153622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153713:-1
position: 153713
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:153622-153713:-1:exon

LOC123629137
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629137
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629137
subclass of: SO_0000673
so part of: LOC123629137
location: complement(153622..153713)
location: region:153622-153713:-1
so has part: feature:153622-153713:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:153622-153713:-1:exon

LOC123629138
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629138
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 318638..318729
location: region:318638-318729:1
so has part: feature:318638-318729:1:exon

123629138
type: Gene
SIO_000068: ncbigene

position:318638:1
position: 318638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:318729:1
position: 318729
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:318638-318729:1:exon

LOC123629138
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629138
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629138
subclass of: SO_0000673
so part of: LOC123629138
location: 318638..318729
location: region:318638-318729:1
so has part: feature:318638-318729:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:318638-318729:1:exon

LOC123629107
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629107
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(324583..324735)
location: region:324583-324735:-1
so has part: feature:324583-324735:-1:exon

123629107
type: Gene
SIO_000068: ncbigene

position:324583:-1
position: 324583
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:324735:-1
position: 324735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:324583-324735:-1:exon

LOC123629107
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629107
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629107
subclass of: SO_0000673
so part of: LOC123629107
location: complement(324583..324735)
location: region:324583-324735:-1
so has part: feature:324583-324735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:324583-324735:-1:exon

LOC123629027
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(416967..457304)
location: region:416967-457304:-1
so has part: feature:416967-457304:-1:exon

123629027
type: Gene
SIO_000068: ncbigene

position:416967:-1
position: 416967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:457304:-1
position: 457304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416967-457304:-1:exon

LOC123629027
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629027
subclass of: SO_0000673
so part of: LOC123629027
location: complement(416967..417512)
location: region:416967-417512:-1
so has part: feature:416967-417512:-1:exon

position:417512:-1
position: 417512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:416967-417512:-1:exon

LOC123629027
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629027
subclass of: SO_0000673
so part of: LOC123629027
location: complement(435227..435430)
location: region:435227-435430:-1
so has part: feature:435227-435430:-1:exon

position:435227:-1
position: 435227
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:435430:-1
position: 435430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:435227-435430:-1:exon

LOC123629027
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629027
subclass of: SO_0000673
so part of: LOC123629027
location: complement(438136..440202)
location: region:438136-440202:-1
so has part: feature:438136-440202:-1:exon

position:438136:-1
position: 438136
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440202:-1
position: 440202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:438136-440202:-1:exon

LOC123629027
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629027
subclass of: SO_0000673
so part of: LOC123629027
location: complement(440362..440658)
location: region:440362-440658:-1
so has part: feature:440362-440658:-1:exon

position:440362:-1
position: 440362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:440658:-1
position: 440658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440362-440658:-1:exon

LOC123629027
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629027
subclass of: SO_0000673
so part of: LOC123629027
location: complement(452976..453071)
location: region:452976-453071:-1
so has part: feature:452976-453071:-1:exon

position:452976:-1
position: 452976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453071:-1
position: 453071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:452976-453071:-1:exon

LOC123629027
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629027
subclass of: SO_0000673
so part of: LOC123629027
location: complement(453580..453706)
location: region:453580-453706:-1
so has part: feature:453580-453706:-1:exon

position:453580:-1
position: 453580
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:453706:-1
position: 453706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:453580-453706:-1:exon

LOC123629027
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629027
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 3% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629027
subclass of: SO_0000673
so part of: LOC123629027
location: complement(457263..457304)
location: region:457263-457304:-1
so has part: feature:457263-457304:-1:exon

position:457263:-1
position: 457263
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:457263-457304:-1:exon

LOC123629149
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629149
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(497458..497566)
location: region:497458-497566:-1
so has part: feature:497458-497566:-1:exon
subclass of: SO_0000623

123629149
type: Gene
SIO_000068: ncbigene

position:497458:-1
position: 497458
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:497566:-1
position: 497566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:497458-497566:-1:exon

LOC123629149
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: snRNA
gene: LOC123629149
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006731907.1
SIO_010081: LOC123629149
subclass of: SO_0000673
so part of: LOC123629149
location: complement(497458..497566)
location: region:497458-497566:-1
so has part: feature:497458-497566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:497458-497566:-1:exon

LOC123629095
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629095
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 505674..506962
location: region:505674-506962:1
so has part: feature:505674-506962:1:exon
subclass of: SO_0000011

123629095
type: Gene
SIO_000068: ncbigene

position:505674:1
position: 505674
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506962:1
position: 506962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:505674-506962:1:exon

LOC123629095
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629095
product: uncharacterized LOC123629095
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731899.1
SIO_010081: LOC123629095
subclass of: SO_0000673
so part of: LOC123629095
location: join(505674..505777,506398..506422,506874..506962)
location: region:505674-506962:1
so has part: feature:505674-505777:1:exon
so has part: feature:506398-506422:1:exon
so has part: feature:506874-506962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:505674-505777:1:exon

position:505777:1
position: 505777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:506398-506422:1:exon

position:506398:1
position: 506398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506422:1
position: 506422
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:506874-506962:1:exon

position:506874:1
position: 506874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629147
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629147
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 515412..515502
location: region:515412-515502:1
so has part: feature:515412-515502:1:exon

123629147
type: Gene
SIO_000068: ncbigene

position:515412:1
position: 515412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515502:1
position: 515502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:515412-515502:1:exon

LOC123629147
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629147
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629147
subclass of: SO_0000673
so part of: LOC123629147
location: 515412..515502
location: region:515412-515502:1
so has part: feature:515412-515502:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:515412-515502:1:exon

LOC123629142
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629142
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(517351..517441)
location: region:517351-517441:-1
so has part: feature:517351-517441:-1:exon

123629142
type: Gene
SIO_000068: ncbigene

position:517351:-1
position: 517351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:517441:-1
position: 517441
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:517351-517441:-1:exon

LOC123629142
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629142
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629142
subclass of: SO_0000673
so part of: LOC123629142
location: complement(517351..517441)
location: region:517351-517441:-1
so has part: feature:517351-517441:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:517351-517441:-1:exon

LOC123629087
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(520012..545026)
location: region:520012-545026:-1
so has part: feature:520012-545026:-1:exon
subclass of: SO_0000010

123629087
type: Gene
SIO_000068: ncbigene

position:520012:-1
position: 520012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:545026:-1
position: 545026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:520012-545026:-1:exon

LOC123629087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629087
product: zinc finger protein 736-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539039.1
SIO_010081: LOC123629087
subclass of: SO_0000673
so part of: LOC123629087
location: complement(join(520012..520194,539394..539489,539995..540121,541606..541765,544923..545026))
location: region:520012-545026:-1
so has part: feature:544923-545026:-1:exon
so has part: feature:541606-541765:-1:exon
so has part: feature:539995-540121:-1:exon
so has part: feature:539394-539489:-1:exon
so has part: feature:520012-520194:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:544923-545026:-1:exon

position:544923:-1
position: 544923
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:541606-541765:-1:exon

position:541606:-1
position: 541606
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541765:-1
position: 541765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:539995-540121:-1:exon

position:539995:-1
position: 539995
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:540121:-1
position: 540121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:539394-539489:-1:exon

position:539394:-1
position: 539394
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:539489:-1
position: 539489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:520012-520194:-1:exon

position:520194:-1
position: 520194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 736-like isoform X2
translation: MAGSQGLLTFRDVAIKFSVEEWACLDPAQQNLHRDVMLENYANLVSVGLAASELDLISCLEHRQEPGPVRRHEAGATHPAG
SIO_010081: LOC123629087
subclass of: SO_0000673
so part of: LOC123629087
location: complement(join(520187..520194,539394..539489,539995..540121,541606..541620))
location: region:520187-541620:-1
so has part: feature:541606-541620:-1:exon
so has part: feature:539995-540121:-1:exon
so has part: feature:539394-539489:-1:exon
so has part: feature:520187-520194:-1:exon

XP_045394995.1
type: Protein
SIO_000068: ncbiprotein

position:520187:-1
position: 520187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:541620:-1
position: 541620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541606-541620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539995-540121:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539394-539489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:520187-520194:-1:exon

LOC123629087
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629087
product: zinc finger protein 736-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539038.1
SIO_010081: LOC123629087
subclass of: SO_0000673
so part of: LOC123629087
location: complement(join(523842..523908,527484..527562,539394..539489,539995..540121,541606..541765,544923..545026))
location: region:523842-545026:-1
so has part: feature:544923-545026:-1:exon
so has part: feature:541606-541765:-1:exon
so has part: feature:539995-540121:-1:exon
so has part: feature:539394-539489:-1:exon
so has part: feature:527484-527562:-1:exon
so has part: feature:523842-523908:-1:exon

position:523842:-1
position: 523842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:544923-545026:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:541606-541765:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539995-540121:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:539394-539489:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:527484-527562:-1:exon

position:527484:-1
position: 527484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:527562:-1
position: 527562
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:523842-523908:-1:exon

position:523908:-1
position: 523908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629087
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629087
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein ZNF720 isoform X1
translation: MAGSQGLLTFRDVAIKFSVEEWACLDPAQQNLHRDVMLENYANLVSVGLAASELDLISCLEHRQEPGPVRRHEAGATHPDIFSHFTQVLWTKKCIEAPFQKVILGSGIADKDEAFLTHLVL
SIO_010081: LOC123629087
subclass of: SO_0000673
so part of: LOC123629087
location: complement(join(523860..523908,527484..527562,539394..539489,539995..540121,541606..541620))
location: region:523860-541620:-1
so has part: feature:541606-541620:-1:exon
so has part: feature:539995-540121:-1:exon
so has part: feature:539394-539489:-1:exon
so has part: feature:527484-527562:-1:exon
so has part: feature:523860-523908:-1:exon

XP_045394994.1
type: Protein
SIO_000068: ncbiprotein

position:523860:-1
position: 523860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:541606-541620:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:539995-540121:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:539394-539489:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:527484-527562:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:523860-523908:-1:exon

LOC123629028
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629028
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 578130..597322
location: region:578130-597322:1
so has part: feature:578130-597322:1:exon

123629028
type: Gene
SIO_000068: ncbigene

position:578130:1
position: 578130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:597322:1
position: 597322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578130-597322:1:exon

LOC123629028
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629028
subclass of: SO_0000673
so part of: LOC123629028
location: 578130..578171
location: region:578130-578171:1
so has part: feature:578130-578171:1:exon

position:578171:1
position: 578171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:578130-578171:1:exon

LOC123629028
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629028
subclass of: SO_0000673
so part of: LOC123629028
location: 581722..581848
location: region:581722-581848:1
so has part: feature:581722-581848:1:exon

position:581722:1
position: 581722
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:581848:1
position: 581848
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:581722-581848:1:exon

LOC123629028
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629028
subclass of: SO_0000673
so part of: LOC123629028
location: 582357..582452
location: region:582357-582452:1
so has part: feature:582357-582452:1:exon

position:582357:1
position: 582357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:582452:1
position: 582452
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:582357-582452:1:exon

LOC123629028
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629028
subclass of: SO_0000673
so part of: LOC123629028
location: 594764..595060
location: region:594764-595060:1
so has part: feature:594764-595060:1:exon

position:594764:1
position: 594764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:595060:1
position: 595060
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:594764-595060:1:exon

LOC123629028
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629028
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 6% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629028
subclass of: SO_0000673
so part of: LOC123629028
location: 595220..597322
location: region:595220-597322:1
so has part: feature:595220-597322:1:exon

position:595220:1
position: 595220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:595220-597322:1:exon

LOC123629139
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629139
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 623871..623962
location: region:623871-623962:1
so has part: feature:623871-623962:1:exon

123629139
type: Gene
SIO_000068: ncbigene

position:623871:1
position: 623871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623962:1
position: 623962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:623871-623962:1:exon

LOC123629139
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629139
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629139
subclass of: SO_0000673
so part of: LOC123629139
location: 623871..623962
location: region:623871-623962:1
so has part: feature:623871-623962:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:623871-623962:1:exon

LOC123629118
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629118
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(629816..629968)
location: region:629816-629968:-1
so has part: feature:629816-629968:-1:exon

123629118
type: Gene
SIO_000068: ncbigene

position:629816:-1
position: 629816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:629968:-1
position: 629968
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:629816-629968:-1:exon

LOC123629118
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629118
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629118
subclass of: SO_0000673
so part of: LOC123629118
location: complement(629816..629968)
location: region:629816-629968:-1
so has part: feature:629816-629968:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:629816-629968:-1:exon

LOC123629029
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 717961..730141
location: region:717961-730141:1
so has part: feature:717961-730141:1:exon
subclass of: SO_0000010

123629029
type: Gene
SIO_000068: ncbigene

position:717961:1
position: 717961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:730141:1
position: 730141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:717961-730141:1:exon

LOC123629029
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629029
product: testis-specific Y-encoded protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045538965.1
SIO_010081: LOC123629029
subclass of: SO_0000673
so part of: LOC123629029
location: join(717961..718044,718180..718291,718385..718530,718635..718714,730072..730141)
location: region:717961-730141:1
so has part: feature:717961-718044:1:exon
so has part: feature:718180-718291:1:exon
so has part: feature:718385-718530:1:exon
so has part: feature:718635-718714:1:exon
so has part: feature:730072-730141:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:717961-718044:1:exon

position:718044:1
position: 718044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:718180-718291:1:exon

position:718180:1
position: 718180
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718291:1
position: 718291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:718385-718530:1:exon

position:718385:1
position: 718385
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718530:1
position: 718530
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:718635-718714:1:exon

position:718635:1
position: 718635
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:718714:1
position: 718714
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:730072-730141:1:exon

position:730072:1
position: 730072
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629029
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629029
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 3-like
translation: MQFVKQPQMSILVNEQEEDMLSYMIHLGVEEIKHPKICYGILLFFGNKSCFWKNVVTKEYLVNITEYRAPHFTPVQWYQDYEHEAHSHPHQNSSLNFFNWFSDHNFTDSYTIAELITEDLCLTPLCYYTRMKAPAEETEDRKVCTFSHHLLGGNCQCNRYSTQ
SIO_010081: LOC123629029
subclass of: SO_0000673
so part of: LOC123629029
location: join(717961..718044,718180..718291,718385..718530,718635..718714,730072..730141)
location: region:717961-730141:1
so has part: feature:717961-718044:1:exon
so has part: feature:718180-718291:1:exon
so has part: feature:718385-718530:1:exon
so has part: feature:718635-718714:1:exon
so has part: feature:730072-730141:1:exon

XP_045394921.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:717961-718044:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:718180-718291:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:718385-718530:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:718635-718714:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:730072-730141:1:exon

LOC123629141
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629141
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 744580..744670
location: region:744580-744670:1
so has part: feature:744580-744670:1:exon

123629141
type: Gene
SIO_000068: ncbigene

position:744580:1
position: 744580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:744670:1
position: 744670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:744580-744670:1:exon

LOC123629141
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629141
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629141
subclass of: SO_0000673
so part of: LOC123629141
location: 744580..744670
location: region:744580-744670:1
so has part: feature:744580-744670:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:744580-744670:1:exon

LOC123629148
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629148
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(746525..746615)
location: region:746525-746615:-1
so has part: feature:746525-746615:-1:exon

123629148
type: Gene
SIO_000068: ncbigene

position:746525:-1
position: 746525
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746615:-1
position: 746615
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746525-746615:-1:exon

LOC123629148
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629148
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629148
subclass of: SO_0000673
so part of: LOC123629148
location: complement(746525..746615)
location: region:746525-746615:-1
so has part: feature:746525-746615:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:746525-746615:-1:exon

LOC123629129
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629129
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 838634..838786
location: region:838634-838786:1
so has part: feature:838634-838786:1:exon

123629129
type: Gene
SIO_000068: ncbigene

position:838634:1
position: 838634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:838786:1
position: 838786
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:838634-838786:1:exon

LOC123629129
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629129
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629129
subclass of: SO_0000673
so part of: LOC123629129
location: 838634..838786
location: region:838634-838786:1
so has part: feature:838634-838786:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:838634-838786:1:exon

LOC123629109
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629109
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(844644..844735)
location: region:844644-844735:-1
so has part: feature:844644-844735:-1:exon

123629109
type: Gene
SIO_000068: ncbigene

position:844644:-1
position: 844644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:844735:-1
position: 844735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:844644-844735:-1:exon

LOC123629109
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629109
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629109
subclass of: SO_0000673
so part of: LOC123629109
location: complement(844644..844735)
location: region:844644-844735:-1
so has part: feature:844644-844735:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:844644-844735:-1:exon

LOC123629031
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629031
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(871328..890544)
location: region:871328-890544:-1
so has part: feature:871328-890544:-1:exon

123629031
type: Gene
SIO_000068: ncbigene

position:871328:-1
position: 871328
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:890544:-1
position: 890544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871328-890544:-1:exon

LOC123629031
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629031
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629031
subclass of: SO_0000673
so part of: LOC123629031
location: complement(871328..873430)
location: region:871328-873430:-1
so has part: feature:871328-873430:-1:exon

position:873430:-1
position: 873430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:871328-873430:-1:exon

LOC123629031
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629031
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629031
subclass of: SO_0000673
so part of: LOC123629031
location: complement(873590..873886)
location: region:873590-873886:-1
so has part: feature:873590-873886:-1:exon

position:873590:-1
position: 873590
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:873886:-1
position: 873886
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:873590-873886:-1:exon

LOC123629031
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629031
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629031
subclass of: SO_0000673
so part of: LOC123629031
location: complement(886225..886320)
location: region:886225-886320:-1
so has part: feature:886225-886320:-1:exon

position:886225:-1
position: 886225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886320:-1
position: 886320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886225-886320:-1:exon

LOC123629031
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629031
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629031
subclass of: SO_0000673
so part of: LOC123629031
location: complement(886829..886955)
location: region:886829-886955:-1
so has part: feature:886829-886955:-1:exon

position:886829:-1
position: 886829
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:886955:-1
position: 886955
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:886829-886955:-1:exon

LOC123629031
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629031
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins, and 5% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629031
subclass of: SO_0000673
so part of: LOC123629031
location: complement(890503..890544)
location: region:890503-890544:-1
so has part: feature:890503-890544:-1:exon

position:890503:-1
position: 890503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:890503-890544:-1:exon

LOC123629108
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629108
note: Derived by automated computational analysis using gene prediction method: cmsearch.
so part of: sequence
location: complement(930706..930814)
location: region:930706-930814:-1
so has part: feature:930706-930814:-1:exon
subclass of: SO_0000623

123629108
type: Gene
SIO_000068: ncbigene

position:930706:-1
position: 930706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:930814:-1
position: 930814
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:930706-930814:-1:exon

LOC123629108
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: snRNA
gene: LOC123629108
product: U6 spliceosomal RNA
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00026
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
transcript id: XR_006731906.1
SIO_010081: LOC123629108
subclass of: SO_0000673
so part of: LOC123629108
location: complement(930706..930814)
location: region:930706-930814:-1
so has part: feature:930706-930814:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:930706-930814:-1:exon

LOC123629145
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629145
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 950103..950193
location: region:950103-950193:1
so has part: feature:950103-950193:1:exon

123629145
type: Gene
SIO_000068: ncbigene

position:950103:1
position: 950103
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:950193:1
position: 950193
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:950103-950193:1:exon

LOC123629145
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629145
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629145
subclass of: SO_0000673
so part of: LOC123629145
location: 950103..950193
location: region:950103-950193:1
so has part: feature:950103-950193:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:950103-950193:1:exon

LOC123629146
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629146
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(952069..952159)
location: region:952069-952159:-1
so has part: feature:952069-952159:-1:exon

123629146
type: Gene
SIO_000068: ncbigene

position:952069:-1
position: 952069
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:952159:-1
position: 952159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:952069-952159:-1:exon

LOC123629146
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629146
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629146
subclass of: SO_0000673
so part of: LOC123629146
location: complement(952069..952159)
location: region:952069-952159:-1
so has part: feature:952069-952159:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:952069-952159:-1:exon

LOC123629088
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(954738..979749)
location: region:954738-979749:-1
so has part: feature:954738-979749:-1:exon
subclass of: SO_0000010

123629088
type: Gene
SIO_000068: ncbigene

position:954738:-1
position: 954738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:979749:-1
position: 979749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:954738-979749:-1:exon

LOC123629088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629088
product: zinc finger protein 736-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539041.1
SIO_010081: LOC123629088
subclass of: SO_0000673
so part of: LOC123629088
location: complement(join(954738..954920,974117..974212,974718..974844,976329..976488,979646..979749))
location: region:954738-979749:-1
so has part: feature:979646-979749:-1:exon
so has part: feature:976329-976488:-1:exon
so has part: feature:974718-974844:-1:exon
so has part: feature:974117-974212:-1:exon
so has part: feature:954738-954920:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:979646-979749:-1:exon

position:979646:-1
position: 979646
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:976329-976488:-1:exon

position:976329:-1
position: 976329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976488:-1
position: 976488
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:974718-974844:-1:exon

position:974718:-1
position: 974718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974844:-1
position: 974844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:974117-974212:-1:exon

position:974117:-1
position: 974117
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:974212:-1
position: 974212
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:954738-954920:-1:exon

position:954920:-1
position: 954920
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: zinc finger protein 736-like isoform X2
translation: MAGSQGLLTFRDVAIKFSVEEWACLDPAQQNLHRDVMLENYANLVSVGLAASELDLISCLEHRQEPGPVRRHEAGATHPAG
SIO_010081: LOC123629088
subclass of: SO_0000673
so part of: LOC123629088
location: complement(join(954913..954920,974117..974212,974718..974844,976329..976343))
location: region:954913-976343:-1
so has part: feature:976329-976343:-1:exon
so has part: feature:974718-974844:-1:exon
so has part: feature:974117-974212:-1:exon
so has part: feature:954913-954920:-1:exon

XP_045394997.1
type: Protein
SIO_000068: ncbiprotein

position:954913:-1
position: 954913
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:976343:-1
position: 976343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976329-976343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974718-974844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974117-974212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:954913-954920:-1:exon

LOC123629088
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629088
product: zinc finger protein 736-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539040.1
SIO_010081: LOC123629088
subclass of: SO_0000673
so part of: LOC123629088
location: complement(join(958568..958634,962210..962288,974117..974212,974718..974844,976329..976488,979646..979749))
location: region:958568-979749:-1
so has part: feature:979646-979749:-1:exon
so has part: feature:976329-976488:-1:exon
so has part: feature:974718-974844:-1:exon
so has part: feature:974117-974212:-1:exon
so has part: feature:962210-962288:-1:exon
so has part: feature:958568-958634:-1:exon

position:958568:-1
position: 958568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:979646-979749:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:976329-976488:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974718-974844:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:974117-974212:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:962210-962288:-1:exon

position:962210:-1
position: 962210
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:962288:-1
position: 962288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:958568-958634:-1:exon

position:958634:-1
position: 958634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629088
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629088
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative protein ZNF720 isoform X1
translation: MAGSQGLLTFRDVAIKFSVEEWACLDPAQQNLHRDVMLENYANLVSVGLAASELDLISCLEHRQEPGPVRRHEAGATHPDIFSHFTQVLWTKKCIEAPFQKVILGSGIADKDEAFLTHLVL
SIO_010081: LOC123629088
subclass of: SO_0000673
so part of: LOC123629088
location: complement(join(958586..958634,962210..962288,974117..974212,974718..974844,976329..976343))
location: region:958586-976343:-1
so has part: feature:976329-976343:-1:exon
so has part: feature:974718-974844:-1:exon
so has part: feature:974117-974212:-1:exon
so has part: feature:962210-962288:-1:exon
so has part: feature:958586-958634:-1:exon

XP_045394996.1
type: Protein
SIO_000068: ncbiprotein

position:958586:-1
position: 958586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:976329-976343:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:974718-974844:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:974117-974212:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:962210-962288:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:958586-958634:-1:exon

LOC123629032
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 1012865..1053237
location: region:1012865-1053237:1
so has part: feature:1012865-1053237:1:exon

123629032
type: Gene
SIO_000068: ncbigene

position:1012865:1
position: 1012865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1053237:1
position: 1053237
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012865-1053237:1:exon

LOC123629032
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629032
subclass of: SO_0000673
so part of: LOC123629032
location: 1012865..1012906
location: region:1012865-1012906:1
so has part: feature:1012865-1012906:1:exon

position:1012906:1
position: 1012906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1012865-1012906:1:exon

LOC123629032
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629032
subclass of: SO_0000673
so part of: LOC123629032
location: 1016460..1016586
location: region:1016460-1016586:1
so has part: feature:1016460-1016586:1:exon

position:1016460:1
position: 1016460
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1016586:1
position: 1016586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1016460-1016586:1:exon

LOC123629032
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629032
subclass of: SO_0000673
so part of: LOC123629032
location: 1017095..1017190
location: region:1017095-1017190:1
so has part: feature:1017095-1017190:1:exon

position:1017095:1
position: 1017095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1017190:1
position: 1017190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1017095-1017190:1:exon

LOC123629032
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629032
subclass of: SO_0000673
so part of: LOC123629032
location: 1029540..1029836
location: region:1029540-1029836:1
so has part: feature:1029540-1029836:1:exon

position:1029540:1
position: 1029540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1029836:1
position: 1029836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029540-1029836:1:exon

LOC123629032
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629032
subclass of: SO_0000673
so part of: LOC123629032
location: 1029996..1032062
location: region:1029996-1032062:1
so has part: feature:1029996-1032062:1:exon

position:1029996:1
position: 1029996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1032062:1
position: 1032062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1029996-1032062:1:exon

LOC123629032
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629032
subclass of: SO_0000673
so part of: LOC123629032
location: 1034763..1034966
location: region:1034763-1034966:1
so has part: feature:1034763-1034966:1:exon

position:1034763:1
position: 1034763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1034966:1
position: 1034966
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1034763-1034966:1:exon

LOC123629032
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629032
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 4% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC123629032
subclass of: SO_0000673
so part of: LOC123629032
location: 1052692..1053237
location: region:1052692-1053237:1
so has part: feature:1052692-1053237:1:exon

position:1052692:1
position: 1052692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1052692-1053237:1:exon

LOC123629140
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629140
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 1152640..1152792
location: region:1152640-1152792:1
so has part: feature:1152640-1152792:1:exon

123629140
type: Gene
SIO_000068: ncbigene

position:1152640:1
position: 1152640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1152792:1
position: 1152792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1152640-1152792:1:exon

LOC123629140
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629140
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF00002
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629140
subclass of: SO_0000673
so part of: LOC123629140
location: 1152640..1152792
location: region:1152640-1152792:1
so has part: feature:1152640-1152792:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1152640-1152792:1:exon

LOC123629110
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629110
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1158643..1158734)
location: region:1158643-1158734:-1
so has part: feature:1158643-1158734:-1:exon

123629110
type: Gene
SIO_000068: ncbigene

position:1158643:-1
position: 1158643
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1158734:-1
position: 1158734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1158643-1158734:-1:exon

LOC123629110
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629110
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629110
subclass of: SO_0000673
so part of: LOC123629110
location: complement(1158643..1158734)
location: region:1158643-1158734:-1
so has part: feature:1158643-1158734:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1158643-1158734:-1:exon

LOC123629033
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629033
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1179017..1182842
location: region:1179017-1182842:1
so has part: feature:1179017-1182842:1:exon
subclass of: SO_0000010

123629033
type: Gene
SIO_000068: ncbigene

position:1179017:1
position: 1179017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182842:1
position: 1182842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1179017-1182842:1:exon

LOC123629033
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629033
product: testicular acid phosphatase-like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
transcript id: XM_045538966.1
SIO_010081: LOC123629033
subclass of: SO_0000673
so part of: LOC123629033
location: join(1179017..1179022,1180023..1180155,1180229..1180311,1180775..1180899,1181110..1181286,1181364..1181441,1181531..1181544,1181770..1181892,1181996..1182075,1182797..1182842)
location: region:1179017-1182842:1
so has part: feature:1179017-1179022:1:exon
so has part: feature:1180023-1180155:1:exon
so has part: feature:1180229-1180311:1:exon
so has part: feature:1180775-1180899:1:exon
so has part: feature:1181110-1181286:1:exon
so has part: feature:1181364-1181441:1:exon
so has part: feature:1181531-1181544:1:exon
so has part: feature:1181770-1181892:1:exon
so has part: feature:1181996-1182075:1:exon
so has part: feature:1182797-1182842:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1179017-1179022:1:exon

position:1179022:1
position: 1179022
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1180023-1180155:1:exon

position:1180023:1
position: 1180023
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180155:1
position: 1180155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1180229-1180311:1:exon

position:1180229:1
position: 1180229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180311:1
position: 1180311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1180775-1180899:1:exon

position:1180775:1
position: 1180775
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1180899:1
position: 1180899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1181110-1181286:1:exon

position:1181110:1
position: 1181110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181286:1
position: 1181286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1181364-1181441:1:exon

position:1181364:1
position: 1181364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181441:1
position: 1181441
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1181531-1181544:1:exon

position:1181531:1
position: 1181531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181544:1
position: 1181544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1181770-1181892:1:exon

position:1181770:1
position: 1181770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1181892:1
position: 1181892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1181996-1182075:1:exon

position:1181996:1
position: 1181996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1182075:1
position: 1182075
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1182797-1182842:1:exon

position:1182797:1
position: 1182797
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629033
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629033
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: testicular acid phosphatase-like
translation: MEQAHALPFPSWASPDVLRTLAQISTLDIGAHMGPPWVAEKAQLTGGILLDAILSNFSRVQHLGLPLKMVMYSAHDSTLLALQGALGLYIRHAPPYTACLGFEFRRCLGDLDEDGGNVTISLFYHNDSARXRLSLSLPGCPDPSPLSCFHQLTTPVWPPAHGVTCHGSYEAATPPAPMVPLLARAVAALAALCLGPGGWFLWNKGSESDPHQLSVYRCPRGQGQTDLAEGGSQKMQDAQPGPTASQLGQAESRGAEDTLSGLPIVAPAETMNWRFMKTQSASWGYLSL
SIO_010081: LOC123629033
subclass of: SO_0000673
so part of: LOC123629033
location: join(1179017..1179022,1180023..1180155,1180229..1180311,1180775..1180899,1181110..1181286,1181364..1181441,1181531..1181544,1181770..1181892,1181996..1182075,1182797..1182842)
location: region:1179017-1182842:1
so has part: feature:1179017-1179022:1:exon
so has part: feature:1180023-1180155:1:exon
so has part: feature:1180229-1180311:1:exon
so has part: feature:1180775-1180899:1:exon
so has part: feature:1181110-1181286:1:exon
so has part: feature:1181364-1181441:1:exon
so has part: feature:1181531-1181544:1:exon
so has part: feature:1181770-1181892:1:exon
so has part: feature:1181996-1182075:1:exon
so has part: feature:1182797-1182842:1:exon

XP_045394922.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1179017-1179022:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1180023-1180155:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1180229-1180311:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1180775-1180899:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1181110-1181286:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1181364-1181441:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1181531-1181544:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1181770-1181892:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1181996-1182075:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1182797-1182842:1:exon

LOC123629079
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1201550..1203518)
location: region:1201550-1203518:-1
so has part: feature:1201550-1203518:-1:exon
subclass of: SO_0000010

123629079
type: Gene
SIO_000068: ncbigene

position:1201550:-1
position: 1201550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203518:-1
position: 1203518
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1201550-1203518:-1:exon

LOC123629079
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629079
product: testis-specific Y-encoded protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539022.1
SIO_010081: LOC123629079
subclass of: SO_0000673
so part of: LOC123629079
location: complement(join(1201550..1201645,1202443..1202528,1202633..1202778,1202891..1203002,1203161..1203518))
location: region:1201550-1203518:-1
so has part: feature:1203161-1203518:-1:exon
so has part: feature:1202891-1203002:-1:exon
so has part: feature:1202633-1202778:-1:exon
so has part: feature:1202443-1202528:-1:exon
so has part: feature:1201550-1201645:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1203161-1203518:-1:exon

position:1203161:-1
position: 1203161
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1202891-1203002:-1:exon

position:1202891:-1
position: 1202891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203002:-1
position: 1203002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1202633-1202778:-1:exon

position:1202633:-1
position: 1202633
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202778:-1
position: 1202778
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1202443-1202528:-1:exon

position:1202443:-1
position: 1202443
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1202528:-1
position: 1202528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1201550-1201645:-1:exon

position:1201645:-1
position: 1201645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629079
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629079
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDASFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629079
subclass of: SO_0000673
so part of: LOC123629079
location: complement(join(1202463..1202528,1202633..1202778,1202891..1203002,1203161..1203310))
location: region:1202463-1203310:-1
so has part: feature:1203161-1203310:-1:exon
so has part: feature:1202891-1203002:-1:exon
so has part: feature:1202633-1202778:-1:exon
so has part: feature:1202463-1202528:-1:exon

XP_045394978.1
type: Protein
SIO_000068: ncbiprotein

position:1202463:-1
position: 1202463
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1203310:-1
position: 1203310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1203161-1203310:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1202891-1203002:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1202633-1202778:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1202463-1202528:-1:exon

LOC123629143
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629143
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: complement(1222318..1222408)
location: region:1222318-1222408:-1
so has part: feature:1222318-1222408:-1:exon

123629143
type: Gene
SIO_000068: ncbigene

position:1222318:-1
position: 1222318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1222408:-1
position: 1222408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1222318-1222408:-1:exon

LOC123629143
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629143
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629143
subclass of: SO_0000673
so part of: LOC123629143
location: complement(1222318..1222408)
location: region:1222318-1222408:-1
so has part: feature:1222318-1222408:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1222318-1222408:-1:exon

BCOR
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: BCOR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1342088..1414101)
location: region:1342088-1414101:-1
so has part: feature:1342088-1414101:-1:exon
subclass of: SO_0000010

123629034
type: Gene
SIO_000068: ncbigene

position:1342088:-1
position: 1342088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1414101:-1
position: 1414101
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1342088-1414101:-1:exon

BCOR
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: BCOR
product: BCL6 corepressor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins
transcript id: XM_045538967.1
SIO_010081: BCOR
subclass of: SO_0000673
so part of: BCOR
location: complement(join(1342088..1342379,1344755..1344911,1345111..1345188,1347432..1347577,1352651..1352817,1391586..1391840,1392187..1392509,1392834..1393076,1393440..1393700,1408614..1408785,1410248..1413049,1413997..1414101))
location: region:1342088-1414101:-1
so has part: feature:1413997-1414101:-1:exon
so has part: feature:1410248-1413049:-1:exon
so has part: feature:1408614-1408785:-1:exon
so has part: feature:1393440-1393700:-1:exon
so has part: feature:1392834-1393076:-1:exon
so has part: feature:1392187-1392509:-1:exon
so has part: feature:1391586-1391840:-1:exon
so has part: feature:1352651-1352817:-1:exon
so has part: feature:1347432-1347577:-1:exon
so has part: feature:1345111-1345188:-1:exon
so has part: feature:1344755-1344911:-1:exon
so has part: feature:1342088-1342379:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1413997-1414101:-1:exon

position:1413997:-1
position: 1413997
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1410248-1413049:-1:exon

position:1410248:-1
position: 1410248
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1413049:-1
position: 1413049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1408614-1408785:-1:exon

position:1408614:-1
position: 1408614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1408785:-1
position: 1408785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1393440-1393700:-1:exon

position:1393440:-1
position: 1393440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393700:-1
position: 1393700
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1392834-1393076:-1:exon

position:1392834:-1
position: 1392834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1393076:-1
position: 1393076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1392187-1392509:-1:exon

position:1392187:-1
position: 1392187
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1392509:-1
position: 1392509
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1391586-1391840:-1:exon

position:1391586:-1
position: 1391586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1391840:-1
position: 1391840
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1352651-1352817:-1:exon

position:1352651:-1
position: 1352651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1352817:-1
position: 1352817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1347432-1347577:-1:exon

position:1347432:-1
position: 1347432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1347577:-1
position: 1347577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1345111-1345188:-1:exon

position:1345111:-1
position: 1345111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1345188:-1
position: 1345188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1344755-1344911:-1:exon

position:1344755:-1
position: 1344755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1344911:-1
position: 1344911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1342088-1342379:-1:exon

position:1342379:-1
position: 1342379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

BCOR
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: BCOR
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: BCL-6 corepressor
translation: MLSGSWCVLLERKISVNDSDALKARLELREENPFVVAANTPHWINELEVLSMDHTGLNQKGLQVPGNIIYSSLCGLDSEQDLEALMSIPGSLGFSSEGNPEMQLKPSIHKTVATSTVSGKPPEDFSAVCKTLPEIEKSAVVTVETLGLDNPASNKVNPLNISGASYLQLPWVNPYMEGAIPAINPFLNSPNTNSQNVCNALLPQQSYSLAQPQYSPVCTDKECFVCLPPPHYVNPHISSSLASHKSLSTPLGSPAIPPAVHCAEKSLLWTMGVSPGNRVDSYAYPHIQNSKQPRVFSAKVVTSCLPENKTLLFSPSPQLSSQVHFPTQPAADTYSEFHKHCARISTSPSFTALKPYMMVGSEFPTAGLSNSKCPKALEGGENAWETVIQDRKDCCSSPLLEKQTITKNITNKPPNMSFKMLDVNSSKAEHMKKMVPTIPNHSKTGSGLVLSGNEIPPGAGCAVYRSEITSTAPSSWVVPRPSPSKANNSKSMLKNEMLDWKILQQQSSSYPCMGDTDAMITNVSGSVLRETHPAFMLPALSASTYGTNVNRSSMETTTSVIQYLGQPLRMPAKHSGSTNSRGAKARDQKPNFKANENGLPPHLIFLSPNEAFRSPPVSCPRSNPPFLAPEGAAVSSLSLHGEGPVYPHPDLLPSGSLFPGHPAPKPGLPYGPPTGWSEFVTYQGAMGLGRVHPMLMPDTPIEITKEKKPERNSWSHESDCYEHPNLHNQFSEISEASNIKLRTEVPNDKNLKLNPAWNQGKTIVKSDKLVHVDILQEELDTKRDTNVSKPGFSVESVGQSAEPTNPPNDPALQQHCNFITMRKELGHISDFHEAYTFKQTTGQSVFSSSTDSVPAGTEKENLGVPILTPFLEPTLVSDGSAITFDKTQEDPKPLCVGSATVSVDVTPTYTRGGTDEAESNDGRVLKLKASKLAKRIANSAGYVGDRLKCITTELYADSSQLNREQRALQHAMMRFSELEMKERKGGHSATKDSKISKFSPVDCEQWKGNQDKKLKSTIANSNNSEKCDYSGGNKHHDPFKASEDEDLPVTYFMERQLVRELPISEVSADMSHSLTPQLDRKRKVSGYSSHTETTVVDLPEDLLLKAKQRRVSKGLNPKTHHHSLDLREWWEPQVSAAESKPSQQSRKEMVQAVQREVTGQGNNITEEKHSRKRAEAKGSRSWLEESLRSTDNKQGLPVFSCCLPTKSLSSTSASSKEQTQPNSLPALRPPAKQQKIKETLKTDILCTGEEGWQAPSLLEKCTNKSEKPSGKRLCKTKHLIPQEPRQGLSLTQDYYMENADGKVTVQRFRKWPESSLDCVLPPAKQEPKPFDHLEQFPPASQSSQLPCSSYPQETIRSRPMPLGARRPPVNKNTGETLLQRAARLGNEELVLYCLENKICDVNHQDNAGYCALHEACANGWLHIAQHLLRYAADVNCSAHDGTRPLHDAVENDHLEIVRLLLSYGADPTLATYSGRTIMKMTNSKLMEMFLTDYLNDLQGCNDSELNGSWEFYGSSVCEPDNKAGYNVLADPPGPEDQDDENEANSNVFEFEFSDSPLLPCYNVQVSVSQGPRNWLLLSDVLKKLKMSSCIFRCSFPNVEIVTIAEAEFYMQVSESVLFSCSEDLEAFNPESKELLDLVEFTNELQILLGSSVEWLNPKNMSLEKDN
SIO_010081: BCOR
subclass of: SO_0000673
so part of: BCOR
location: complement(join(1342088..1342379,1344755..1344911,1345111..1345188,1347432..1347577,1352651..1352817,1391586..1391840,1392187..1392509,1392834..1393076,1393440..1393700,1408614..1408785,1410248..1413049,1413997..1414101))
location: region:1342088-1414101:-1
so has part: feature:1413997-1414101:-1:exon
so has part: feature:1410248-1413049:-1:exon
so has part: feature:1408614-1408785:-1:exon
so has part: feature:1393440-1393700:-1:exon
so has part: feature:1392834-1393076:-1:exon
so has part: feature:1392187-1392509:-1:exon
so has part: feature:1391586-1391840:-1:exon
so has part: feature:1352651-1352817:-1:exon
so has part: feature:1347432-1347577:-1:exon
so has part: feature:1345111-1345188:-1:exon
so has part: feature:1344755-1344911:-1:exon
so has part: feature:1342088-1342379:-1:exon

XP_045394923.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1413997-1414101:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1410248-1413049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1408614-1408785:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1393440-1393700:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1392834-1393076:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1392187-1392509:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1391586-1391840:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1352651-1352817:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1347432-1347577:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1345111-1345188:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1344755-1344911:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1342088-1342379:-1:exon

TXLNG
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: TXLNG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1498228..1538979
location: region:1498228-1538979:1
so has part: feature:1498228-1538979:1:exon
subclass of: SO_0000010

123629080
type: Gene
SIO_000068: ncbigene

position:1498228:1
position: 1498228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538979:1
position: 1538979
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498228-1538979:1:exon

TXLNG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: TXLNG
product: taxilin gamma, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 15 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539023.1
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1498228..1498463,1513194..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1532139..1532234,1534136..1534492,1538892..1538979)
location: region:1498228-1538979:1
so has part: feature:1498228-1498463:1:exon
so has part: feature:1513194-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1532139-1532234:1:exon
so has part: feature:1534136-1534492:1:exon
so has part: feature:1538892-1538979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1498228-1498463:1:exon

position:1498463:1
position: 1498463
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1513194-1513492:1:exon

position:1513194:1
position: 1513194
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1513492:1
position: 1513492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1515453-1515544:1:exon

position:1515453:1
position: 1515453
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1515544:1
position: 1515544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1520595-1520765:1:exon

position:1520595:1
position: 1520595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1520765:1
position: 1520765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1522179-1522373:1:exon

position:1522179:1
position: 1522179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1522373:1
position: 1522373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1524761-1524880:1:exon

position:1524761:1
position: 1524761
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1524880:1
position: 1524880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1525778-1525852:1:exon

position:1525778:1
position: 1525778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1525852:1
position: 1525852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1530005-1530097:1:exon

position:1530005:1
position: 1530005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1530097:1
position: 1530097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1532139-1532234:1:exon

position:1532139:1
position: 1532139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1532234:1
position: 1532234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1534136-1534492:1:exon

position:1534136:1
position: 1534136
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1534492:1
position: 1534492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1538892-1538979:1:exon

position:1538892:1
position: 1538892
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TXLNG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: TXLNG
product: taxilin gamma, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 28 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539026.1
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1498228..1498463,1513194..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1532139..1532234,1534136..1534303,1538892..1538979)
location: region:1498228-1538979:1
so has part: feature:1498228-1498463:1:exon
so has part: feature:1513194-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1532139-1532234:1:exon
so has part: feature:1534136-1534303:1:exon
so has part: feature:1538892-1538979:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1498228-1498463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513194-1513492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1515453-1515544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1520595-1520765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1522179-1522373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1524761-1524880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525778-1525852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1530005-1530097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1532139-1532234:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1534136-1534303:1:exon

position:1534303:1
position: 1534303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1538892-1538979:1:exon

TXLNG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: TXLNG
product: taxilin gamma, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539027.1
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1498228..1498463,1513194..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1532139..1532234,1538892..1538972)
location: region:1498228-1538972:1
so has part: feature:1498228-1498463:1:exon
so has part: feature:1513194-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1532139-1532234:1:exon
so has part: feature:1538892-1538972:1:exon

position:1538972:1
position: 1538972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498228-1498463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513194-1513492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1515453-1515544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1520595-1520765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1522179-1522373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1524761-1524880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525778-1525852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1530005-1530097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1532139-1532234:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1538892-1538972:1:exon

TXLNG
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: TXLNG
product: taxilin gamma, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539024.1
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1498228..1498463,1513194..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1534136..1536525)
location: region:1498228-1536525:1
so has part: feature:1498228-1498463:1:exon
so has part: feature:1513194-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1534136-1536525:1:exon

position:1536525:1
position: 1536525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1498228-1498463:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1513194-1513492:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1515453-1515544:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1520595-1520765:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1522179-1522373:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1524761-1524880:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1525778-1525852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1530005-1530097:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1534136-1536525:1:exon

TXLNG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: TXLNG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-taxilin isoform X3
translation: MEKAGICGRGVKVDMLYNSQSNDILQHQDSNCGTSNKHSLEEDEGSDFVTKNRNLVSPLYCTLKSREEPPEQKAQTDPTNGQQDLDHKKNKEKTLGKEVLLLMEALNSLSTPEEKLAALCKKYADLLEESRNVQKQIKTLQKKQAQIVKEKVHLQSEQSKAFLARSKLESLCRELQRHNKTLKEEHMQQAKEEEESRKEATVHFQITLNEIQAQMEQHDIHNAKLQQENIELGEKLKKLLEEYTLREEHIEKVFKHKELQQQFVDARLQQTAQLIKEADKKHEREREFLLKEATESRHKYEEMKQEEVQLKQQLSLYMDKFEEFQTTMAKSNELFTTFKQEMEKMTRKIKKLEKEMIIWRTKWENNNKILLQMAEEKTVGDKKHRAFQIKLERLEKLYGALQTERNELKEKVEVLKEQVYAKVTDRNLATPGMCCIRDE
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1513207..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1532139..1532234,1534136..1534303,1538892..1538915)
location: region:1513207-1538915:1
so has part: feature:1513207-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1532139-1532234:1:exon
so has part: feature:1534136-1534303:1:exon
so has part: feature:1538892-1538915:1:exon

XP_045394982.1
type: Protein
SIO_000068: ncbiprotein

position:1513207:1
position: 1513207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1538915:1
position: 1538915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513207-1513492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515453-1515544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520595-1520765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1522179-1522373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524761-1524880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525778-1525852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1530005-1530097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1532139-1532234:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1534136-1534303:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1538892-1538915:1:exon

TXLNG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: TXLNG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-taxilin isoform X4
translation: MEKAGICGRGVKVDMLYNSQSNDILQHQDSNCGTSNKHSLEEDEGSDFVTKNRNLVSPLYCTLKSREEPPEQKAQTDPTNGQQDLDHKKNKEKTLGKEVLLLMEALNSLSTPEEKLAALCKKYADLLEESRNVQKQIKTLQKKQAQIVKEKVHLQSEQSKAFLARSKLESLCRELQRHNKTLKEEHMQQAKEEEESRKEATVHFQITLNEIQAQMEQHDIHNAKLQQENIELGEKLKKLLEEYTLREEHIEKVFKHKELQQQFVDARLQQTAQLIKEADKKHEREREFLLKEATESRHKYEEMKQEEVQLKQQLSLYMDKFEEFQTTMAKSNELFTTFKQEMEKMTRKIKKLEKEMIIWRTKWENNNKILLQMAEEMCCIRDE
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1513207..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1532139..1532234,1538892..1538915)
location: region:1513207-1538915:1
so has part: feature:1513207-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1532139-1532234:1:exon
so has part: feature:1538892-1538915:1:exon

XP_045394983.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1513207-1513492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515453-1515544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520595-1520765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1522179-1522373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524761-1524880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525778-1525852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1530005-1530097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1532139-1532234:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1538892-1538915:1:exon

TXLNG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: TXLNG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-taxilin isoform X1
translation: MEKAGICGRGVKVDMLYNSQSNDILQHQDSNCGTSNKHSLEEDEGSDFVTKNRNLVSPLYCTLKSREEPPEQKAQTDPTNGQQDLDHKKNKEKTLGKEVLLLMEALNSLSTPEEKLAALCKKYADLLEESRNVQKQIKTLQKKQAQIVKEKVHLQSEQSKAFLARSKLESLCRELQRHNKTLKEEHMQQAKEEEESRKEATVHFQITLNEIQAQMEQHDIHNAKLQQENIELGEKLKKLLEEYTLREEHIEKVFKHKELQQQFVDARLQQTAQLIKEADKKHEREREFLLKEATESRHKYEEMKQEEVQLKQQLSLYMDKFEEFQTTMAKSNELFTTFKQEMEKMTRKIKKLEKEMIIWRTKWENNNKILLQMAEEKTVGDKKHRAFQIKLERLEKLYGALQTERNELKEKVEVLKEQVYAKVTDRNLATPGVSPCTALHSHKDQNTSSKRALGVCLEVRPKGVNETKCHSKDSVHRISSRH
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1513207..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1532139..1532234,1534136..1534456)
location: region:1513207-1534456:1
so has part: feature:1513207-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1532139-1532234:1:exon
so has part: feature:1534136-1534456:1:exon

XP_045394979.1
type: Protein
SIO_000068: ncbiprotein

position:1534456:1
position: 1534456
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1513207-1513492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515453-1515544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520595-1520765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1522179-1522373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524761-1524880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525778-1525852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1530005-1530097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1532139-1532234:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1534136-1534456:1:exon

TXLNG
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: TXLNG
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gamma-taxilin isoform X2
translation: MEKAGICGRGVKVDMLYNSQSNDILQHQDSNCGTSNKHSLEEDEGSDFVTKNRNLVSPLYCTLKSREEPPEQKAQTDPTNGQQDLDHKKNKEKTLGKEVLLLMEALNSLSTPEEKLAALCKKYADLLEESRNVQKQIKTLQKKQAQIVKEKVHLQSEQSKAFLARSKLESLCRELQRHNKTLKEEHMQQAKEEEESRKEATVHFQITLNEIQAQMEQHDIHNAKLQQENIELGEKLKKLLEEYTLREEHIEKVFKHKELQQQFVDARLQQTAQLIKEADKKHEREREFLLKEATESRHKYEEMKQEEVQLKQQLSLYMDKFEEFQTTMAKSNELFTTFKQEMEKKTVGDKKHRAFQIKLERLEKLYGALQTERNELKEKVEVLKEQVYAKVTDRNLATPGVSPCTALHSHKDQNTSSKRALGVCLEVRPKGVNETKCHSKDSVHRISSRH
SIO_010081: TXLNG
subclass of: SO_0000673
so part of: TXLNG
location: join(1513207..1513492,1515453..1515544,1520595..1520765,1522179..1522373,1524761..1524880,1525778..1525852,1530005..1530097,1534136..1534456)
location: region:1513207-1534456:1
so has part: feature:1513207-1513492:1:exon
so has part: feature:1515453-1515544:1:exon
so has part: feature:1520595-1520765:1:exon
so has part: feature:1522179-1522373:1:exon
so has part: feature:1524761-1524880:1:exon
so has part: feature:1525778-1525852:1:exon
so has part: feature:1530005-1530097:1:exon
so has part: feature:1534136-1534456:1:exon

XP_045394980.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1513207-1513492:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1515453-1515544:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1520595-1520765:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1522179-1522373:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1524761-1524880:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1525778-1525852:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1530005-1530097:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1534136-1534456:1:exon

LOC123629089
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1656265..1698736)
location: region:1656265-1698736:-1
so has part: feature:1656265-1698736:-1:exon
subclass of: SO_0000010

123629089
type: Gene
SIO_000068: ncbigene

position:1656265:-1
position: 1656265
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698736:-1
position: 1698736
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1656265-1698736:-1:exon

LOC123629089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629089
product: lysine-specific demethylase 5D, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539045.1
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656265..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693824,1694677..1694847,1696911..1696988,1698194..1698362,1698505..1698736))
location: region:1656265-1698736:-1
so has part: feature:1698505-1698736:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693824:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1656265-1657196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1698505-1698736:-1:exon

position:1698505:-1
position: 1698505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1698194-1698362:-1:exon

position:1698194:-1
position: 1698194
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698362:-1
position: 1698362
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1696911-1696988:-1:exon

position:1696911:-1
position: 1696911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1696988:-1
position: 1696988
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1694677-1694847:-1:exon

position:1694677:-1
position: 1694677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1694847:-1
position: 1694847
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1693690-1693824:-1:exon

position:1693690:-1
position: 1693690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1693824:-1
position: 1693824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1689785-1689908:-1:exon

position:1689785:-1
position: 1689785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689908:-1
position: 1689908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1689501-1689664:-1:exon

position:1689501:-1
position: 1689501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1689664:-1
position: 1689664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1686861-1687019:-1:exon

position:1686861:-1
position: 1686861
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1687019:-1
position: 1687019
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1686309-1686428:-1:exon

position:1686309:-1
position: 1686309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686428:-1
position: 1686428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1686035-1686193:-1:exon

position:1686035:-1
position: 1686035
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1686193:-1
position: 1686193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1669577-1669758:-1:exon

position:1669577:-1
position: 1669577
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669758:-1
position: 1669758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1669319-1669481:-1:exon

position:1669319:-1
position: 1669319
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1669481:-1
position: 1669481
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1665672-1665791:-1:exon

position:1665672:-1
position: 1665672
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665791:-1
position: 1665791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1665353-1665547:-1:exon

position:1665353:-1
position: 1665353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665547:-1
position: 1665547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1664897-1665078:-1:exon

position:1664897:-1
position: 1664897
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1665078:-1
position: 1665078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1664695-1664819:-1:exon

position:1664695:-1
position: 1664695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664819:-1
position: 1664819
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1664426-1664573:-1:exon

position:1664426:-1
position: 1664426
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1664573:-1
position: 1664573
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1661116-1661221:-1:exon

position:1661116:-1
position: 1661116
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1661221:-1
position: 1661221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1660205-1660563:-1:exon

position:1660205:-1
position: 1660205
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1660563:-1
position: 1660563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1659677-1659815:-1:exon

position:1659677:-1
position: 1659677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659815:-1
position: 1659815
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1659050-1659229:-1:exon

position:1659050:-1
position: 1659050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1659229:-1
position: 1659229
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1658758-1658895:-1:exon

position:1658758:-1
position: 1658758
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658895:-1
position: 1658895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1657989-1658588:-1:exon

position:1657989:-1
position: 1657989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1658588:-1
position: 1658588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1657640-1657718:-1:exon

position:1657640:-1
position: 1657640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657718:-1
position: 1657718
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1657305-1657504:-1:exon

position:1657305:-1
position: 1657305
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1657504:-1
position: 1657504
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:1656265-1657196:-1:exon

position:1657196:-1
position: 1657196
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629089
product: lysine-specific demethylase 5D, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 39 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539044.1
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656265..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693821,1694677..1694847,1695475..1695597,1696911..1696988,1698194..1698362,1698505..1698736))
location: region:1656265-1698736:-1
so has part: feature:1698505-1698736:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1695475-1695597:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693821:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
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so has part: feature:1659050-1659229:-1:exon
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so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
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urn:…
SIO_000300: 1
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urn:…
SIO_000300: 2
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urn:…
SIO_000300: 3
SIO_000628: feature:1696911-1696988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695475-1695597:-1:exon

position:1695475:-1
position: 1695475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1695597:-1
position: 1695597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1694677-1694847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693690-1693821:-1:exon

position:1693821:-1
position: 1693821
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1689785-1689908:-1:exon

urn:…
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urn:…
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urn:…
SIO_000300: 12
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urn:…
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SIO_000300: 15
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urn:…
SIO_000300: 16
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urn:…
SIO_000300: 17
SIO_000628: feature:1664695-1664819:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1660205-1660563:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1656265-1657196:-1:exon

LOC123629089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629089
product: lysine-specific demethylase 5D, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539046.1
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656265..1656691,1657106..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693824,1694677..1694847,1695475..1695597,1696911..1696988,1698194..1698362,1698505..1698736))
location: region:1656265-1698736:-1
so has part: feature:1698505-1698736:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1695475-1695597:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693824:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1657106-1657196:-1:exon
so has part: feature:1656265-1656691:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1698505-1698736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698194-1698362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1696911-1696988:-1:exon

urn:…
SIO_000300: 4
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urn:…
SIO_000300: 5
SIO_000628: feature:1694677-1694847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693690-1693824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689785-1689908:-1:exon

urn:…
SIO_000300: 8
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urn:…
SIO_000300: 9
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urn:…
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urn:…
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urn:…
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urn:…
SIO_000300: 13
SIO_000628: feature:1669319-1669481:-1:exon

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SIO_000628: feature:1665672-1665791:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1665353-1665547:-1:exon

urn:…
SIO_000300: 16
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urn:…
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urn:…
SIO_000300: 18
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
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urn:…
SIO_000300: 21
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659050-1659229:-1:exon

urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1657106-1657196:-1:exon

position:1657106:-1
position: 1657106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:1656265-1656691:-1:exon

position:1656691:-1
position: 1656691
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629089
product: lysine-specific demethylase 5D, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539042.1
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656265..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693824,1694677..1694847,1695475..1695597,1696911..1696988,1698194..1698362,1698505..1698736))
location: region:1656265-1698736:-1
so has part: feature:1698505-1698736:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1695475-1695597:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693824:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1656265-1657196:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1698505-1698736:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698194-1698362:-1:exon

urn:…
SIO_000300: 3
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SIO_000300: 4
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urn:…
SIO_000300: 5
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SIO_000300: 7
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SIO_000628: feature:1686861-1687019:-1:exon

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urn:…
SIO_000300: 12
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urn:…
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urn:…
SIO_000300: 19
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
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urn:…
SIO_000300: 21
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
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urn:…
SIO_000300: 24
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1656265-1657196:-1:exon

LOC123629089
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629089
product: lysine-specific demethylase 5D, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 18 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539047.1
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656265..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693668..1693675))
location: region:1656265-1693675:-1
so has part: feature:1693668-1693675:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
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so has part: feature:1669577-1669758:-1:exon
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so has part: feature:1664897-1665078:-1:exon
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so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
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so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1656265-1657196:-1:exon

position:1693675:-1
position: 1693675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1693668-1693675:-1:exon

position:1693668:-1
position: 1693668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1689785-1689908:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1689501-1689664:-1:exon

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SIO_000628: feature:1686861-1687019:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1686309-1686428:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1686035-1686193:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1669577-1669758:-1:exon

urn:…
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SIO_000628: feature:1669319-1669481:-1:exon

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SIO_000628: feature:1665672-1665791:-1:exon

urn:…
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SIO_000628: feature:1665353-1665547:-1:exon

urn:…
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SIO_000628: feature:1664897-1665078:-1:exon

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SIO_000628: feature:1664695-1664819:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
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SIO_000628: feature:1661116-1661221:-1:exon

urn:…
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SIO_000628: feature:1660205-1660563:-1:exon

urn:…
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SIO_000628: feature:1659677-1659815:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:1657989-1658588:-1:exon

urn:…
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urn:…
SIO_000300: 21
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1656265-1657196:-1:exon

LOC123629089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X4
translation: MNNVRSQNGGCETKTLANCVAFRPDMESGSDDFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPEDWQPPFAVEVDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVECRILDLYSLGKIVLEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTHPFDSEEKDKEYKPHSIPLRQSVQPSKFSNYSRRAKRLLPDPEPTEEDIVKNPELKKLQIYGPGPKMMGLGLMAKAKTLRKKDKEEVACSSTVTVKEEPSRDGKVASALPKEDLSHSLEPCSKMTMRLRKNHSSAQFVESHFCRLCSRGDEDDKLLLCDGCDENYHIFCLLPPLPEIPRGVWRCPKCILAECKQPPEAFGFEQATQEYTLQSFGEMADSFKAEYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSKRNLSLEEEEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLFHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLREVETCISQVLRLVSGQVASSCKVETPQLTLTDLQVLLDQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALASLPSSLGLLQSLLKRGQQLGVEVPEAHQLQQQVEQAKWLEEVKQALAPSGQRGSLVIMQGLLVMGSKIASSPSVDKAQAELQELLTIAERWEEKARFCLEARQKQPPATLEAIIREAENIPVHLPNIQALKEALTKAQAWIADVIEIQNGDHYPCLDDLEGLVAVGRDLPVSLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIMAFKEGEQKEKESILQLRRTNSAKPNPLASSTTATPVTSICVCGQVPAGVGALQCDLCQDWFHGQCVSVPHLLSSPRPSPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASEGVTPLLRRLAELRQQLQAEPRPKEPPTATSAHAFNHLIEGNGNNISKVQGLLENRDSMSSPGKIAPGEGSGKRDVALLSSLLPELTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERIHTLLELEKPEHQGIRTRGHALERRRRQRKIDQSRKVLFEA
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656675..1656691,1657106..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693824,1694677..1694847,1695475..1695597,1696911..1696988,1698194..1698362,1698505..1698560))
location: region:1656675-1698560:-1
so has part: feature:1698505-1698560:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1695475-1695597:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693824:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1657106-1657196:-1:exon
so has part: feature:1656675-1656691:-1:exon

XP_045395002.1
type: Protein
SIO_000068: ncbiprotein

position:1656675:-1
position: 1656675
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1698560:-1
position: 1698560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1698505-1698560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698194-1698362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1696911-1696988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695475-1695597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694677-1694847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693690-1693824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689785-1689908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1689501-1689664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1686861-1687019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686309-1686428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686035-1686193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669577-1669758:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1669319-1669481:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1665672-1665791:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1665353-1665547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664897-1665078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1664695-1664819:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1660205-1660563:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659050-1659229:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1658758-1658895:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1657106-1657196:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:1656675-1656691:-1:exon

LOC123629089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X3
translation: MNNVRSQNGGCETKTLANCVAFRPDMESGSDDFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPEDWQPPFAVEVDNFRFTPRIQRLNELEIVLEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTHPFDSEEKDKEYKPHSIPLRQSVQPSKFSNYSRRAKRLLPDPEPTEEDIVKNPELKKLQIYGPGPKMMGLGLMAKAKTLRKKDKEEVACSSTVTVKEEPSRDGKVASALPKEDLSHSLEPCSKMTMRLRKNHSSAQFVESHFCRLCSRGDEDDKLLLCDGCDENYHIFCLLPPLPEIPRGVWRCPKCILAECKQPPEAFGFEQATQEYTLQSFGEMADSFKAEYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSKRNLSLEEEEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLFHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLREVETCISQVLRLVSGQVASSCKVETPQLTLTDLQVLLDQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALASLPSSLGLLQSLLKRGQQLGVEVPEAHQLQQQVEQAKWLEEVKQALAPSGQRGSLVIMQGLLVMGSKIASSPSVDKAQAELQELLTIAERWEEKARFCLEARQKQPPATLEAIIREAENIPVHLPNIQALKEALTKAQAWIADVIEIQNGDHYPCLDDLEGLVAVGRDLPVSLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIMAFKEGEQKEKESILQLRRTNSAKPNPLASSTTATPVTSICVCGQVPAGVGALQCDLCQDWFHGQCVSVPHLLSSPRPSPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASEGVTPLLRRLAELRQQLQAEPRPKEPPTATSAHAFNHLIEGNGNNISKVQGLLENRDSMSSPGKIAPGEGSGKRDVALLSSLLPELTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERIHTLLELEKPEHQGIRTRGHALERRRRQRKIDQSRKGENLTQEELGSKRARSSGIKPEEGQEKEQFEEEVEHKNMFMTHPTDDSPILKGNHNSLQQKDSGPSSAFASLTPLLHLSCPLHQEL
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656846..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693824,1694677..1694847,1696911..1696988,1698194..1698362,1698505..1698560))
location: region:1656846-1698560:-1
so has part: feature:1698505-1698560:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693824:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1656846-1657196:-1:exon

XP_045395001.1
type: Protein
SIO_000068: ncbiprotein

position:1656846:-1
position: 1656846
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1698505-1698560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698194-1698362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1696911-1696988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1694677-1694847:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1693690-1693824:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1689785-1689908:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689501-1689664:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1686861-1687019:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1686309-1686428:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686035-1686193:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1669577-1669758:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669319-1669481:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1665672-1665791:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1665353-1665547:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1664897-1665078:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664695-1664819:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1660205-1660563:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1659050-1659229:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1658758-1658895:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1656846-1657196:-1:exon

LOC123629089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X2
translation: MNNVRSQNGGCETKTLANCVAFRPDMESGSDDFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPEDWQPPFAVEVDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVECRILDLYSLGKIVLEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIIYPYEMFQSGANLVCNTHPFDSEEKDKEYKPHSIPLRQSVQPSKFSNYSRRAKRLLPDPEPTEEDIVKNPELKKLQIYGPGPKMMGLGLMAKAKTLRKKDKEEVACSSTVTVKEEPSRDGKVASALPKEDLSHSLEPCSKMTMRLRKNHSSAQFVESHFCRLCSRGDEDDKLLLCDGCDENYHIFCLLPPLPEIPRGVWRCPKCILAECKQPPEAFGFEQATQEYTLQSFGEMADSFKAEYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSKRNLSLEEEEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLFHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLREVETCISQVLRLVSGQVASSCKVETPQLTLTDLQVLLDQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALASLPSSLGLLQSLLKRGQQLGVEVPEAHQLQQQVEQAKWLEEVKQALAPSGQRGSLVIMQGLLVMGSKIASSPSVDKAQAELQELLTIAERWEEKARFCLEARQKQPPATLEAIIREAENIPVHLPNIQALKEALTKAQAWIADVIEIQNGDHYPCLDDLEGLVAVGRDLPVSLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIMAFKEGEQKEKESILQLRRTNSAKPNPLASSTTATPVTSICVCGQVPAGVGALQCDLCQDWFHGQCVSVPHLLSSPRPSPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASEGVTPLLRRLAELRQQLQAEPRPKEPPTATSAHAFNHLIEGNGNNISKVQGLLENRDSMSSPGKIAPGEGSGKRDVALLSSLLPELTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERIHTLLELEKPEHQGIRTRGHALERRRRQRKIDQSRKGENLTQEELGSKRARSSGIKPEEGQEKEQFEEEVEHKNMFMTHPTDDSPILKGNHNSLQQKDSGPSSAFASLTPLLHLSCPLHQEL
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656846..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693821,1694677..1694847,1695475..1695597,1696911..1696988,1698194..1698362,1698505..1698560))
location: region:1656846-1698560:-1
so has part: feature:1698505-1698560:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1695475-1695597:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693821:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1656846-1657196:-1:exon

XP_045395000.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1698505-1698560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698194-1698362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1696911-1696988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695475-1695597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694677-1694847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693690-1693821:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689785-1689908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1689501-1689664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1686861-1687019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686309-1686428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686035-1686193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669577-1669758:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1669319-1669481:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1665672-1665791:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1665353-1665547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664897-1665078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1664695-1664819:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1660205-1660563:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659050-1659229:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1658758-1658895:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1656846-1657196:-1:exon

LOC123629089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X1
translation: MNNVRSQNGGCETKTLANCVAFRPDMESGSDDFLPPPECPVFEPSWAEFQDPLGYIAKIRPIAEKSGICKIRPPEDWQPPFAVEVDNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVECRILDLYSLGKIVLEEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTHPFDSEEKDKEYKPHSIPLRQSVQPSKFSNYSRRAKRLLPDPEPTEEDIVKNPELKKLQIYGPGPKMMGLGLMAKAKTLRKKDKEEVACSSTVTVKEEPSRDGKVASALPKEDLSHSLEPCSKMTMRLRKNHSSAQFVESHFCRLCSRGDEDDKLLLCDGCDENYHIFCLLPPLPEIPRGVWRCPKCILAECKQPPEAFGFEQATQEYTLQSFGEMADSFKAEYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSKRNLSLEEEEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLFHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLREVETCISQVLRLVSGQVASSCKVETPQLTLTDLQVLLDQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALASLPSSLGLLQSLLKRGQQLGVEVPEAHQLQQQVEQAKWLEEVKQALAPSGQRGSLVIMQGLLVMGSKIASSPSVDKAQAELQELLTIAERWEEKARFCLEARQKQPPATLEAIIREAENIPVHLPNIQALKEALTKAQAWIADVIEIQNGDHYPCLDDLEGLVAVGRDLPVSLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIMAFKEGEQKEKESILQLRRTNSAKPNPLASSTTATPVTSICVCGQVPAGVGALQCDLCQDWFHGQCVSVPHLLSSPRPSPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASEGVTPLLRRLAELRQQLQAEPRPKEPPTATSAHAFNHLIEGNGNNISKVQGLLENRDSMSSPGKIAPGEGSGKRDVALLSSLLPELTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERIHTLLELEKPEHQGIRTRGHALERRRRQRKIDQSRKGENLTQEELGSKRARSSGIKPEEGQEKEQFEEEVEHKNMFMTHPTDDSPILKGNHNSLQQKDSGPSSAFASLTPLLHLSCPLHQEL
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656846..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689908,1693690..1693824,1694677..1694847,1695475..1695597,1696911..1696988,1698194..1698362,1698505..1698560))
location: region:1656846-1698560:-1
so has part: feature:1698505-1698560:-1:exon
so has part: feature:1698194-1698362:-1:exon
so has part: feature:1696911-1696988:-1:exon
so has part: feature:1695475-1695597:-1:exon
so has part: feature:1694677-1694847:-1:exon
so has part: feature:1693690-1693824:-1:exon
so has part: feature:1689785-1689908:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1656846-1657196:-1:exon

XP_045394998.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1698505-1698560:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1698194-1698362:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1696911-1696988:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1695475-1695597:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1694677-1694847:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1693690-1693824:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1689785-1689908:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1689501-1689664:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1686861-1687019:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1686309-1686428:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1686035-1686193:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1669577-1669758:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1669319-1669481:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1665672-1665791:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1665353-1665547:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1664897-1665078:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1664695-1664819:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1660205-1660563:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1659050-1659229:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1658758-1658895:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:1656846-1657196:-1:exon

LOC123629089
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629089
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: lysine-specific demethylase 5D isoform X5
translation: MMGLGLMAKAKTLRKKDKEEVACSSTVTVKEEPSRDGKVASALPKEDLSHSLEPCSKMTMRLRKNHSSAQFVESHFCRLCSRGDEDDKLLLCDGCDENYHIFCLLPPLPEIPRGVWRCPKCILAECKQPPEAFGFEQATQEYTLQSFGEMADSFKAEYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSKRNLSLEEEEYAASGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLNLAVAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALACYDCPDSLVCLFHINDLCKCSSSRQYLRYRYTLDELPTMLHKLKIRAESFDTWANKVRVALEVEDGRKRSFEELRALESEARERRFPNSELLQRLKNCLREVETCISQVLRLVSGQVASSCKVETPQLTLTDLQVLLDQMGSLPCAMHQIGDVKDVLEQVEAYQAEAREALASLPSSLGLLQSLLKRGQQLGVEVPEAHQLQQQVEQAKWLEEVKQALAPSGQRGSLVIMQGLLVMGSKIASSPSVDKAQAELQELLTIAERWEEKARFCLEARQKQPPATLEAIIREAENIPVHLPNIQALKEALTKAQAWIADVIEIQNGDHYPCLDDLEGLVAVGRDLPVSLEELRQLELQVLTAHSWREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDLRDPGSVIMAFKEGEQKEKESILQLRRTNSAKPNPLASSTTATPVTSICVCGQVPAGVGALQCDLCQDWFHGQCVSVPHLLSSPRPSPTSSPLLAWWEWDTKFLCPLCMRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAIVWQGRARQALASEGVTPLLRRLAELRQQLQAEPRPKEPPTATSAHAFNHLIEGNGNNISKVQGLLENRDSMSSPGKIAPGEGSGKRDVALLSSLLPELTGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQPPDLERIHTLLELEKPEHQGIRTRGHALERRRRQRKIDQSRKGENLTQEELGSKRARSSGIKPEEGQEKEQFEEEVEHKNMFMTHPTDDSPILKGNHNSLQQKDSGPSSAFASLTPLLHLSCPLHQEL
SIO_010081: LOC123629089
subclass of: SO_0000673
so part of: LOC123629089
location: complement(join(1656846..1657196,1657305..1657504,1657640..1657718,1657989..1658588,1658758..1658895,1659050..1659229,1659677..1659815,1660205..1660563,1661116..1661221,1664426..1664573,1664695..1664819,1664897..1665078,1665353..1665547,1665672..1665791,1669319..1669481,1669577..1669758,1686035..1686193,1686309..1686428,1686861..1687019,1689501..1689664,1689785..1689833))
location: region:1656846-1689833:-1
so has part: feature:1689785-1689833:-1:exon
so has part: feature:1689501-1689664:-1:exon
so has part: feature:1686861-1687019:-1:exon
so has part: feature:1686309-1686428:-1:exon
so has part: feature:1686035-1686193:-1:exon
so has part: feature:1669577-1669758:-1:exon
so has part: feature:1669319-1669481:-1:exon
so has part: feature:1665672-1665791:-1:exon
so has part: feature:1665353-1665547:-1:exon
so has part: feature:1664897-1665078:-1:exon
so has part: feature:1664695-1664819:-1:exon
so has part: feature:1664426-1664573:-1:exon
so has part: feature:1661116-1661221:-1:exon
so has part: feature:1660205-1660563:-1:exon
so has part: feature:1659677-1659815:-1:exon
so has part: feature:1659050-1659229:-1:exon
so has part: feature:1658758-1658895:-1:exon
so has part: feature:1657989-1658588:-1:exon
so has part: feature:1657640-1657718:-1:exon
so has part: feature:1657305-1657504:-1:exon
so has part: feature:1656846-1657196:-1:exon

XP_045395003.1
type: Protein
SIO_000068: ncbiprotein

position:1689833:-1
position: 1689833
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1689785-1689833:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1689501-1689664:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1686861-1687019:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1686309-1686428:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1686035-1686193:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1669577-1669758:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1669319-1669481:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1665672-1665791:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1665353-1665547:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1664897-1665078:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1664695-1664819:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1664426-1664573:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1661116-1661221:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1660205-1660563:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1659677-1659815:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1659050-1659229:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1658758-1658895:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1657989-1658588:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1657640-1657718:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1657305-1657504:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1656846-1657196:-1:exon

LOC123629035
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 1827550..1841395
location: region:1827550-1841395:1
so has part: feature:1827550-1841395:1:exon
subclass of: SO_0000010

123629035
type: Gene
SIO_000068: ncbigene

position:1827550:1
position: 1827550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841395:1
position: 1841395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1827550-1841395:1:exon

LOC123629035
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629035
product: ubiquitin carboxyl-terminal hydrolase 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045538968.1
SIO_010081: LOC123629035
subclass of: SO_0000673
so part of: LOC123629035
location: join(1827550..1827695,1830458..1830567,1830727..1830857,1831090..1831207,1834402..1834547,1834688..1834749,1834877..1834976,1835350..1835523,1835625..1835783,1836179..1836403,1836533..1836616,1836724..1836818,1837488..1837694,1838346..1838398,1838591..1838836,1838918..1838988,1839680..1839792,1840575..1840724,1840808..1840923,1841090..1841178,1841261..1841395)
location: region:1827550-1841395:1
so has part: feature:1827550-1827695:1:exon
so has part: feature:1830458-1830567:1:exon
so has part: feature:1830727-1830857:1:exon
so has part: feature:1831090-1831207:1:exon
so has part: feature:1834402-1834547:1:exon
so has part: feature:1834688-1834749:1:exon
so has part: feature:1834877-1834976:1:exon
so has part: feature:1835350-1835523:1:exon
so has part: feature:1835625-1835783:1:exon
so has part: feature:1836179-1836403:1:exon
so has part: feature:1836533-1836616:1:exon
so has part: feature:1836724-1836818:1:exon
so has part: feature:1837488-1837694:1:exon
so has part: feature:1838346-1838398:1:exon
so has part: feature:1838591-1838836:1:exon
so has part: feature:1838918-1838988:1:exon
so has part: feature:1839680-1839792:1:exon
so has part: feature:1840575-1840724:1:exon
so has part: feature:1840808-1840923:1:exon
so has part: feature:1841090-1841178:1:exon
so has part: feature:1841261-1841395:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1827550-1827695:1:exon

position:1827695:1
position: 1827695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1830458-1830567:1:exon

position:1830458:1
position: 1830458
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830567:1
position: 1830567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1830727-1830857:1:exon

position:1830727:1
position: 1830727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1830857:1
position: 1830857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1831090-1831207:1:exon

position:1831090:1
position: 1831090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1831207:1
position: 1831207
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1834402-1834547:1:exon

position:1834402:1
position: 1834402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834547:1
position: 1834547
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1834688-1834749:1:exon

position:1834688:1
position: 1834688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834749:1
position: 1834749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1834877-1834976:1:exon

position:1834877:1
position: 1834877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1834976:1
position: 1834976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1835350-1835523:1:exon

position:1835350:1
position: 1835350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1835523:1
position: 1835523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1835625-1835783:1:exon

position:1835625:1
position: 1835625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1835783:1
position: 1835783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1836179-1836403:1:exon

position:1836179:1
position: 1836179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836403:1
position: 1836403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1836533-1836616:1:exon

position:1836533:1
position: 1836533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836616:1
position: 1836616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1836724-1836818:1:exon

position:1836724:1
position: 1836724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1836818:1
position: 1836818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1837488-1837694:1:exon

position:1837488:1
position: 1837488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1837694:1
position: 1837694
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1838346-1838398:1:exon

position:1838346:1
position: 1838346
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1838398:1
position: 1838398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1838591-1838836:1:exon

position:1838591:1
position: 1838591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1838836:1
position: 1838836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1838918-1838988:1:exon

position:1838918:1
position: 1838918
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1838988:1
position: 1838988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1839680-1839792:1:exon

position:1839680:1
position: 1839680
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1839792:1
position: 1839792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1840575-1840724:1:exon

position:1840575:1
position: 1840575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1840724:1
position: 1840724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1840808-1840923:1:exon

position:1840808:1
position: 1840808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1840923:1
position: 1840923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1841090-1841178:1:exon

position:1841090:1
position: 1841090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1841178:1
position: 1841178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1841261-1841395:1:exon

position:1841261:1
position: 1841261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629035
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629035
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 11-like
translation: MAAAEDSTAEADSVDREPQESAPTLASQWRRVENCEEGRERPLRPGESWFLVEQHWYKQWEMYVQGGNQDSSTFPGCINNAELFEDQVNWRLKEWLVEGEDYVLLPEAAWHQLVSWYGLKHDQPPIERKVVELASMRKVEVYPLELLLVHHSDMNTLHEAQFSHTDTVDLVLRTAREQFLVDPEEETRLWIKNSDGSFEHLHNTHDTVLDICLRPRQVVIMETRDKDGTWPSEKLHCMRSILEDDEDFEGQPGVCGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFCNPLGMKGEIAQAYADLVKQAWSGHHRSIVPHIFKSKVGHFASQFLGYQQHDLQEFLSFLLDGLHEDLNRVKKKEYVELCDASGRSDQEAAQEAWQNHKRWNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVSHDRILEVFFVSMDPKLRPEQHQLAVPKKGKIFDLCVALSEHIGVSPGRMMVANVFRHRFYKIYQVEESLSGILDRDDIFIYEVSDRPGKSEGTEEDIVLPVYLRERTPAQDYDDSYHGLMLFGYPLLVSVPRDQLTWDSLYHILLHRLSRYVTRPNSDDEDSGDEKDTEEKDNISKAGKTAGDSPQDPDPEHTRARSRVWGGRQAPSGSSPGPSRPPRKLLFTLQTVNSNGTSDCSAISEDGQRVSFSSQPYIAIDWEPEMKKRYYDEVEAEDFVKHDCIGYVLKKSPVWLQECIELFTTVETLEEENLWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTMFSCKKLETLVEFPIRDLDFSEFVIKPQSESDPVLYKYDLIAVSNHYGGLRDGHYTTFARNKDSGQWHYFDDNSVSPAAESQMKSKAAYVLFYQRQDTAQCFSSPPAPGPKASPAQGFLSCSESVDVD
SIO_010081: LOC123629035
subclass of: SO_0000673
so part of: LOC123629035
location: join(1827550..1827695,1830458..1830567,1830727..1830857,1831090..1831207,1834402..1834547,1834688..1834749,1834877..1834976,1835350..1835523,1835625..1835783,1836179..1836403,1836533..1836616,1836724..1836818,1837488..1837694,1838346..1838398,1838591..1838836,1838918..1838988,1839680..1839792,1840575..1840724,1840808..1840923,1841090..1841178,1841261..1841395)
location: region:1827550-1841395:1
so has part: feature:1827550-1827695:1:exon
so has part: feature:1830458-1830567:1:exon
so has part: feature:1830727-1830857:1:exon
so has part: feature:1831090-1831207:1:exon
so has part: feature:1834402-1834547:1:exon
so has part: feature:1834688-1834749:1:exon
so has part: feature:1834877-1834976:1:exon
so has part: feature:1835350-1835523:1:exon
so has part: feature:1835625-1835783:1:exon
so has part: feature:1836179-1836403:1:exon
so has part: feature:1836533-1836616:1:exon
so has part: feature:1836724-1836818:1:exon
so has part: feature:1837488-1837694:1:exon
so has part: feature:1838346-1838398:1:exon
so has part: feature:1838591-1838836:1:exon
so has part: feature:1838918-1838988:1:exon
so has part: feature:1839680-1839792:1:exon
so has part: feature:1840575-1840724:1:exon
so has part: feature:1840808-1840923:1:exon
so has part: feature:1841090-1841178:1:exon
so has part: feature:1841261-1841395:1:exon

XP_045394924.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:1827550-1827695:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1830458-1830567:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1830727-1830857:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1831090-1831207:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1834402-1834547:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1834688-1834749:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1834877-1834976:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1835350-1835523:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1835625-1835783:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1836179-1836403:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1836533-1836616:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1836724-1836818:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1837488-1837694:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1838346-1838398:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1838591-1838836:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1838918-1838988:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1839680-1839792:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1840575-1840724:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1840808-1840923:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1841090-1841178:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1841261-1841395:1:exon

LOC123629036
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629036
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(1924767..1940709)
location: region:1924767-1940709:-1
so has part: feature:1924767-1940709:-1:exon

123629036
type: Gene
SIO_000068: ncbigene

position:1924767:-1
position: 1924767
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1940709:-1
position: 1940709
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1924767-1940709:-1:exon

LOC123629036
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC123629036
subclass of: SO_0000673
so part of: LOC123629036
location: complement(1924767..1925420)
location: region:1924767-1925420:-1
so has part: feature:1924767-1925420:-1:exon

position:1925420:-1
position: 1925420
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1924767-1925420:-1:exon

LOC123629036
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC123629036
subclass of: SO_0000673
so part of: LOC123629036
location: complement(1934921..1935125)
location: region:1934921-1935125:-1
so has part: feature:1934921-1935125:-1:exon

position:1934921:-1
position: 1934921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1935125:-1
position: 1935125
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1934921-1935125:-1:exon

LOC123629036
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC123629036
subclass of: SO_0000673
so part of: LOC123629036
location: complement(1936798..1936852)
location: region:1936798-1936852:-1
so has part: feature:1936798-1936852:-1:exon

position:1936798:-1
position: 1936798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1936852:-1
position: 1936852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1936798-1936852:-1:exon

LOC123629036
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629036
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins
pseudo: true
SIO_010081: LOC123629036
subclass of: SO_0000673
so part of: LOC123629036
location: complement(1940375..1940709)
location: region:1940375-1940709:-1
so has part: feature:1940375-1940709:-1:exon

position:1940375:-1
position: 1940375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1940375-1940709:-1:exon

LOC123629090
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629090
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1946439..1961449)
location: region:1946439-1961449:-1
so has part: feature:1946439-1961449:-1:exon
subclass of: SO_0000010

123629090
type: Gene
SIO_000068: ncbigene

position:1946439:-1
position: 1946439
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961449:-1
position: 1961449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1946439-1961449:-1:exon

LOC123629090
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629090
product: ubiquitin-like modifier-activating enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 1% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045539048.1
SIO_010081: LOC123629090
subclass of: SO_0000673
so part of: LOC123629090
location: complement(join(1946439..1946574,1946742..1946842,1946943..1947044,1947529..1947720,1947844..1947936,1948185..1948273,1949934..1950123,1950236..1950310,1950963..1951158,1951465..1951529,1953056..1953252,1953371..1953536,1955396..1955551,1955901..1955981,1956070..1956174,1956308..1956484,1956620..1956766,1956856..1956953,1958625..1958757,1958863..1958953,1959208..1959314,1960664..1960798,1960893..1961061,1961143..1961201,1961330..1961449))
location: region:1946439-1961449:-1
so has part: feature:1961330-1961449:-1:exon
so has part: feature:1961143-1961201:-1:exon
so has part: feature:1960893-1961061:-1:exon
so has part: feature:1960664-1960798:-1:exon
so has part: feature:1959208-1959314:-1:exon
so has part: feature:1958863-1958953:-1:exon
so has part: feature:1958625-1958757:-1:exon
so has part: feature:1956856-1956953:-1:exon
so has part: feature:1956620-1956766:-1:exon
so has part: feature:1956308-1956484:-1:exon
so has part: feature:1956070-1956174:-1:exon
so has part: feature:1955901-1955981:-1:exon
so has part: feature:1955396-1955551:-1:exon
so has part: feature:1953371-1953536:-1:exon
so has part: feature:1953056-1953252:-1:exon
so has part: feature:1951465-1951529:-1:exon
so has part: feature:1950963-1951158:-1:exon
so has part: feature:1950236-1950310:-1:exon
so has part: feature:1949934-1950123:-1:exon
so has part: feature:1948185-1948273:-1:exon
so has part: feature:1947844-1947936:-1:exon
so has part: feature:1947529-1947720:-1:exon
so has part: feature:1946943-1947044:-1:exon
so has part: feature:1946742-1946842:-1:exon
so has part: feature:1946439-1946574:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:1961330-1961449:-1:exon

position:1961330:-1
position: 1961330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1961143-1961201:-1:exon

position:1961143:-1
position: 1961143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961201:-1
position: 1961201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1960893-1961061:-1:exon

position:1960893:-1
position: 1960893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1961061:-1
position: 1961061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1960664-1960798:-1:exon

position:1960664:-1
position: 1960664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1960798:-1
position: 1960798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1959208-1959314:-1:exon

position:1959208:-1
position: 1959208
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1959314:-1
position: 1959314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1958863-1958953:-1:exon

position:1958863:-1
position: 1958863
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958953:-1
position: 1958953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1958625-1958757:-1:exon

position:1958625:-1
position: 1958625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1958757:-1
position: 1958757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1956856-1956953:-1:exon

position:1956856:-1
position: 1956856
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956953:-1
position: 1956953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1956620-1956766:-1:exon

position:1956620:-1
position: 1956620
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956766:-1
position: 1956766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1956308-1956484:-1:exon

position:1956308:-1
position: 1956308
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956484:-1
position: 1956484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1956070-1956174:-1:exon

position:1956070:-1
position: 1956070
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1956174:-1
position: 1956174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1955901-1955981:-1:exon

position:1955901:-1
position: 1955901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955981:-1
position: 1955981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1955396-1955551:-1:exon

position:1955396:-1
position: 1955396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1955551:-1
position: 1955551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1953371-1953536:-1:exon

position:1953371:-1
position: 1953371
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953536:-1
position: 1953536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1953056-1953252:-1:exon

position:1953056:-1
position: 1953056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1953252:-1
position: 1953252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1951465-1951529:-1:exon

position:1951465:-1
position: 1951465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951529:-1
position: 1951529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1950963-1951158:-1:exon

position:1950963:-1
position: 1950963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1951158:-1
position: 1951158
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1950236-1950310:-1:exon

position:1950236:-1
position: 1950236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950310:-1
position: 1950310
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1949934-1950123:-1:exon

position:1949934:-1
position: 1949934
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1950123:-1
position: 1950123
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1948185-1948273:-1:exon

position:1948185:-1
position: 1948185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1948273:-1
position: 1948273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1947844-1947936:-1:exon

position:1947844:-1
position: 1947844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947936:-1
position: 1947936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1947529-1947720:-1:exon

position:1947529:-1
position: 1947529
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947720:-1
position: 1947720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1946943-1947044:-1:exon

position:1946943:-1
position: 1946943
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1947044:-1
position: 1947044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1946742-1946842:-1:exon

position:1946742:-1
position: 1946742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1946842:-1
position: 1946842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1946439-1946574:-1:exon

position:1946574:-1
position: 1946574
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629090
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629090
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(1961366..1961368),aa:OTHER)
product: LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
translation: MSRSLLSKKRRVSGPDSKLGSNCTPTXSVMFEVPSGPTYGMAQNSSEIYIDEGLYSRQLYVLGHEAMKHLQASSVLVSGLQGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVSTYTGPLVAEFLSAFQVVVLTNSPLEDQLQVGEFCHSRGIKLVVADTRGLFGQLFCDFGEEMILVDANGEQPLSAMVAMVTKDNPGVVICLDEARHGFESGDFVSFTEVQGMSELNGTHPIEIKVLDPYTFSICDTSSFSDYICGGIVSQVKVSKKISFKSLLASLSEPDFVITDFAKYSRPAQLHIGFQALHQFCTQHSRPPRPHNEEDATELVVLAQAVNAQSLPAVKQDNLDEDLIRKLAYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALECLPEDKVAFMEDRCLPRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLGCGDGGEITVTDMDTIEKSNLNRQFLFRPWDVTKSKSDTAAAAVRQINPRINVVSHWNRVGADTECIYDDDFFQNLDGVANALDNVIARLYMDCRCVYYRKPLLESGTLGTKGNVQVVIPFLTDSYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDPKFVERTLRLPGTQPWEVVKAVQRSLVLQRPESWADCVTWAFYHWHTQYTDNIRQLLHNFPPHQLTSSGVPFWSRPKRCPHPLTFDVNNPLHLDYVMAAANLFAQMYGLTGSQDRAAVSTLLQSVQVPEFIPKSGVQSRVSDQELQSTGASVDDTRLEELKAVLPSPDKLTGFKMYPIDFEKDDDSNFHMDFIMAASNLRAENYDIAPADRHKSKLIAGKIIPAIVTTTAAVVGLTCLELYKVVQGHQQLESYKNSFINLALPSFSFSEPLAPPHHEYHDQEWTLWDRFDVQGLQPNGEEMTLKQFLDYFKAEHKLEITMLSQGVSMLYSFFMPATKLKERLDQPMTEIVSRVSRKKLGRHVRSLVLELCCNDESGEDVEVPYVRYIIR
SIO_010081: LOC123629090
subclass of: SO_0000673
so part of: LOC123629090
location: complement(join(1946439..1946574,1946742..1946842,1946943..1947044,1947529..1947720,1947844..1947936,1948185..1948273,1949934..1950123,1950236..1950310,1950963..1951158,1951465..1951529,1953056..1953252,1953371..1953536,1955396..1955551,1955901..1955981,1956070..1956174,1956308..1956484,1956620..1956766,1956856..1956953,1958625..1958757,1958863..1958953,1959208..1959314,1960664..1960798,1960893..1961061,1961143..1961201,1961330..1961446))
location: region:1946439-1961446:-1
so has part: feature:1961330-1961446:-1:exon
so has part: feature:1961143-1961201:-1:exon
so has part: feature:1960893-1961061:-1:exon
so has part: feature:1960664-1960798:-1:exon
so has part: feature:1959208-1959314:-1:exon
so has part: feature:1958863-1958953:-1:exon
so has part: feature:1958625-1958757:-1:exon
so has part: feature:1956856-1956953:-1:exon
so has part: feature:1956620-1956766:-1:exon
so has part: feature:1956308-1956484:-1:exon
so has part: feature:1956070-1956174:-1:exon
so has part: feature:1955901-1955981:-1:exon
so has part: feature:1955396-1955551:-1:exon
so has part: feature:1953371-1953536:-1:exon
so has part: feature:1953056-1953252:-1:exon
so has part: feature:1951465-1951529:-1:exon
so has part: feature:1950963-1951158:-1:exon
so has part: feature:1950236-1950310:-1:exon
so has part: feature:1949934-1950123:-1:exon
so has part: feature:1948185-1948273:-1:exon
so has part: feature:1947844-1947936:-1:exon
so has part: feature:1947529-1947720:-1:exon
so has part: feature:1946943-1947044:-1:exon
so has part: feature:1946742-1946842:-1:exon
so has part: feature:1946439-1946574:-1:exon

XP_045395004.1
type: Protein
SIO_000068: ncbiprotein

position:1961446:-1
position: 1961446
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1961330-1961446:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1961143-1961201:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1960893-1961061:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1960664-1960798:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1959208-1959314:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1958863-1958953:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1958625-1958757:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1956856-1956953:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1956620-1956766:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1956308-1956484:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1956070-1956174:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1955901-1955981:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1955396-1955551:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1953371-1953536:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1953056-1953252:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1951465-1951529:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1950963-1951158:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1950236-1950310:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1949934-1950123:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1948185-1948273:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1947844-1947936:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1947529-1947720:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1946943-1947044:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1946742-1946842:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1946439-1946574:-1:exon

LOC123629091
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629091
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(1985563..2000567)
location: region:1985563-2000567:-1
so has part: feature:1985563-2000567:-1:exon
subclass of: SO_0000010

123629091
type: Gene
SIO_000068: ncbigene

position:1985563:-1
position: 1985563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000567:-1
position: 2000567
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:1985563-2000567:-1:exon

LOC123629091
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629091
product: ubiquitin-like modifier-activating enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 1% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045539049.1
SIO_010081: LOC123629091
subclass of: SO_0000673
so part of: LOC123629091
location: complement(join(1985563..1985698,1985866..1985966,1986067..1986168,1986651..1986842,1986966..1987058,1987307..1987395,1989056..1989245,1989358..1989432,1990085..1990280,1990587..1990651,1992179..1992375,1992494..1992659,1994519..1994674,1995024..1995104,1995193..1995297,1995431..1995607,1995743..1995889,1995979..1996076,1997749..1997881,1997987..1998077,1998332..1998438,1999785..1999919,2000014..2000182,2000264..2000322,2000451..2000567))
location: region:1985563-2000567:-1
so has part: feature:2000451-2000567:-1:exon
so has part: feature:2000264-2000322:-1:exon
so has part: feature:2000014-2000182:-1:exon
so has part: feature:1999785-1999919:-1:exon
so has part: feature:1998332-1998438:-1:exon
so has part: feature:1997987-1998077:-1:exon
so has part: feature:1997749-1997881:-1:exon
so has part: feature:1995979-1996076:-1:exon
so has part: feature:1995743-1995889:-1:exon
so has part: feature:1995431-1995607:-1:exon
so has part: feature:1995193-1995297:-1:exon
so has part: feature:1995024-1995104:-1:exon
so has part: feature:1994519-1994674:-1:exon
so has part: feature:1992494-1992659:-1:exon
so has part: feature:1992179-1992375:-1:exon
so has part: feature:1990587-1990651:-1:exon
so has part: feature:1990085-1990280:-1:exon
so has part: feature:1989358-1989432:-1:exon
so has part: feature:1989056-1989245:-1:exon
so has part: feature:1987307-1987395:-1:exon
so has part: feature:1986966-1987058:-1:exon
so has part: feature:1986651-1986842:-1:exon
so has part: feature:1986067-1986168:-1:exon
so has part: feature:1985866-1985966:-1:exon
so has part: feature:1985563-1985698:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2000451-2000567:-1:exon

position:2000451:-1
position: 2000451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2000264-2000322:-1:exon

position:2000264:-1
position: 2000264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000322:-1
position: 2000322
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2000014-2000182:-1:exon

position:2000014:-1
position: 2000014
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2000182:-1
position: 2000182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:1999785-1999919:-1:exon

position:1999785:-1
position: 1999785
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1999919:-1
position: 1999919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:1998332-1998438:-1:exon

position:1998332:-1
position: 1998332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998438:-1
position: 1998438
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:1997987-1998077:-1:exon

position:1997987:-1
position: 1997987
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1998077:-1
position: 1998077
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:1997749-1997881:-1:exon

position:1997749:-1
position: 1997749
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1997881:-1
position: 1997881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:1995979-1996076:-1:exon

position:1995979:-1
position: 1995979
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1996076:-1
position: 1996076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:1995743-1995889:-1:exon

position:1995743:-1
position: 1995743
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995889:-1
position: 1995889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:1995431-1995607:-1:exon

position:1995431:-1
position: 1995431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995607:-1
position: 1995607
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:1995193-1995297:-1:exon

position:1995193:-1
position: 1995193
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995297:-1
position: 1995297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:1995024-1995104:-1:exon

position:1995024:-1
position: 1995024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1995104:-1
position: 1995104
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:1994519-1994674:-1:exon

position:1994519:-1
position: 1994519
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1994674:-1
position: 1994674
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:1992494-1992659:-1:exon

position:1992494:-1
position: 1992494
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992659:-1
position: 1992659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:1992179-1992375:-1:exon

position:1992179:-1
position: 1992179
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1992375:-1
position: 1992375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:1990587-1990651:-1:exon

position:1990587:-1
position: 1990587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1990651:-1
position: 1990651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:1990085-1990280:-1:exon

position:1990085:-1
position: 1990085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1990280:-1
position: 1990280
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:1989358-1989432:-1:exon

position:1989358:-1
position: 1989358
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989432:-1
position: 1989432
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:1989056-1989245:-1:exon

position:1989056:-1
position: 1989056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1989245:-1
position: 1989245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:1987307-1987395:-1:exon

position:1987307:-1
position: 1987307
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1987395:-1
position: 1987395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:1986966-1987058:-1:exon

position:1986966:-1
position: 1986966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1987058:-1
position: 1987058
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:1986651-1986842:-1:exon

position:1986651:-1
position: 1986651
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986842:-1
position: 1986842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:1986067-1986168:-1:exon

position:1986067:-1
position: 1986067
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1986168:-1
position: 1986168
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:1985866-1985966:-1:exon

position:1985866:-1
position: 1985866
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:1985966:-1
position: 1985966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:1985563-1985698:-1:exon

position:1985698:-1
position: 1985698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629091
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629091
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2000487..2000489),aa:OTHER)
product: LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
translation: MSRSLLSKKRRVSGPDSKLGSNCTPTXSVMFEVPSGPTYGMAQNSSEIYIDEGLYSRQLYVLGHEAMKHLQASSVLVSGLQGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVSTYTGPLVAEFLSAFQVVVLTNSPLEDQLQVGEFCHSRGIKLVVADTRGLFGQLFCDFGEEMILVDANGEQPLSAMVAMVTKDNPGVVICLDEARHGFESGDFVSFTEVQGMSELNGTHPIEIKVLDPYTFSICDTSSFSDYICGGIVSQVRVSKKISFKSLLASLSEPDFVITDFAKYSRPAQLHIGFQALHQFCTQHSRPPRPHNEEDATELVVLAQAVNAQSLPAVKQDNLDEDLIWKLAYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALECLPEDKVAFMEDRCLPRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLGCGDGGEITVTDMDTIEKSNLNRQFLFRPWDVTKSKSDTAAAAVRQINPRINVVSHWNRVGADTECIYDDDFFQNLDGVANALDNVIARLYMDCRCVYYRKPLLESGTLGTKGNVQVVIPFLTDSYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDPKFVERTLRLPGTQPWEVVKAVQRSLVLQRPESWADCVTWAFYHWHTQYTDNIRQLLHNFPPHQLTSSGVPFWSRPKRCPHPLTFDVNNPLHLDYVMAAANLFAQMYGLTGSQDRAAVSTLLQSVQVPEFIPKSGVQSRVSDQELQSTGASVDDTRLEELKAVLPSPDKLTGFKMYPIDFEKDDDSNFHMDFIMAASNLRAENYDIAPADRHKSKLIAGKIIPAIVTTTAAVVGLTCLELYKVVQGHQQLESYKNSFINLALPSFSFSEPLAPPHHEYHDQEWTLWDRFDVQGLQPNGEEMTLKQFLDYFKAEHKLEITMLSQGVSMLYSFFMPATKLKERLDQPMTEIVSRVSRKKLGRHVRSLVLELCCNDESGEDVEVPYVRYIIR
SIO_010081: LOC123629091
subclass of: SO_0000673
so part of: LOC123629091
location: complement(join(1985563..1985698,1985866..1985966,1986067..1986168,1986651..1986842,1986966..1987058,1987307..1987395,1989056..1989245,1989358..1989432,1990085..1990280,1990587..1990651,1992179..1992375,1992494..1992659,1994519..1994674,1995024..1995104,1995193..1995297,1995431..1995607,1995743..1995889,1995979..1996076,1997749..1997881,1997987..1998077,1998332..1998438,1999785..1999919,2000014..2000182,2000264..2000322,2000451..2000567))
location: region:1985563-2000567:-1
so has part: feature:2000451-2000567:-1:exon
so has part: feature:2000264-2000322:-1:exon
so has part: feature:2000014-2000182:-1:exon
so has part: feature:1999785-1999919:-1:exon
so has part: feature:1998332-1998438:-1:exon
so has part: feature:1997987-1998077:-1:exon
so has part: feature:1997749-1997881:-1:exon
so has part: feature:1995979-1996076:-1:exon
so has part: feature:1995743-1995889:-1:exon
so has part: feature:1995431-1995607:-1:exon
so has part: feature:1995193-1995297:-1:exon
so has part: feature:1995024-1995104:-1:exon
so has part: feature:1994519-1994674:-1:exon
so has part: feature:1992494-1992659:-1:exon
so has part: feature:1992179-1992375:-1:exon
so has part: feature:1990587-1990651:-1:exon
so has part: feature:1990085-1990280:-1:exon
so has part: feature:1989358-1989432:-1:exon
so has part: feature:1989056-1989245:-1:exon
so has part: feature:1987307-1987395:-1:exon
so has part: feature:1986966-1987058:-1:exon
so has part: feature:1986651-1986842:-1:exon
so has part: feature:1986067-1986168:-1:exon
so has part: feature:1985866-1985966:-1:exon
so has part: feature:1985563-1985698:-1:exon

XP_045395005.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2000451-2000567:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2000264-2000322:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2000014-2000182:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:1999785-1999919:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:1998332-1998438:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:1997987-1998077:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:1997749-1997881:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:1995979-1996076:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:1995743-1995889:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:1995431-1995607:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:1995193-1995297:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:1995024-1995104:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:1994519-1994674:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:1992494-1992659:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:1992179-1992375:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:1990587-1990651:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:1990085-1990280:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:1989358-1989432:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:1989056-1989245:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:1987307-1987395:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:1986966-1987058:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:1986651-1986842:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:1986067-1986168:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:1985866-1985966:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:1985563-1985698:-1:exon

LOC123629092
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629092
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2040104..2055110
location: region:2040104-2055110:1
so has part: feature:2040104-2055110:1:exon
subclass of: SO_0000010

123629092
type: Gene
SIO_000068: ncbigene

position:2040104:1
position: 2040104
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2055110:1
position: 2055110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2040104-2055110:1:exon

LOC123629092
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629092
product: ubiquitin-like modifier-activating enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 1% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045539050.1
SIO_010081: LOC123629092
subclass of: SO_0000673
so part of: LOC123629092
location: join(2040104..2040220,2040349..2040407,2040489..2040657,2040752..2040886,2042233..2042339,2042594..2042684,2042791..2042923,2044596..2044693,2044783..2044929,2045065..2045241,2045374..2045478,2045567..2045647,2045997..2046152,2048012..2048177,2048296..2048492,2050020..2050084,2050391..2050586,2051239..2051313,2051426..2051615,2053276..2053364,2053613..2053705,2053829..2054020,2054505..2054606,2054707..2054807,2054975..2055110)
location: region:2040104-2055110:1
so has part: feature:2040104-2040220:1:exon
so has part: feature:2040349-2040407:1:exon
so has part: feature:2040489-2040657:1:exon
so has part: feature:2040752-2040886:1:exon
so has part: feature:2042233-2042339:1:exon
so has part: feature:2042594-2042684:1:exon
so has part: feature:2042791-2042923:1:exon
so has part: feature:2044596-2044693:1:exon
so has part: feature:2044783-2044929:1:exon
so has part: feature:2045065-2045241:1:exon
so has part: feature:2045374-2045478:1:exon
so has part: feature:2045567-2045647:1:exon
so has part: feature:2045997-2046152:1:exon
so has part: feature:2048012-2048177:1:exon
so has part: feature:2048296-2048492:1:exon
so has part: feature:2050020-2050084:1:exon
so has part: feature:2050391-2050586:1:exon
so has part: feature:2051239-2051313:1:exon
so has part: feature:2051426-2051615:1:exon
so has part: feature:2053276-2053364:1:exon
so has part: feature:2053613-2053705:1:exon
so has part: feature:2053829-2054020:1:exon
so has part: feature:2054505-2054606:1:exon
so has part: feature:2054707-2054807:1:exon
so has part: feature:2054975-2055110:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2040104-2040220:1:exon

position:2040220:1
position: 2040220
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2040349-2040407:1:exon

position:2040349:1
position: 2040349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040407:1
position: 2040407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2040489-2040657:1:exon

position:2040489:1
position: 2040489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040657:1
position: 2040657
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2040752-2040886:1:exon

position:2040752:1
position: 2040752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2040886:1
position: 2040886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2042233-2042339:1:exon

position:2042233:1
position: 2042233
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042339:1
position: 2042339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2042594-2042684:1:exon

position:2042594:1
position: 2042594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042684:1
position: 2042684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2042791-2042923:1:exon

position:2042791:1
position: 2042791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2042923:1
position: 2042923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2044596-2044693:1:exon

position:2044596:1
position: 2044596
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044693:1
position: 2044693
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2044783-2044929:1:exon

position:2044783:1
position: 2044783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2044929:1
position: 2044929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2045065-2045241:1:exon

position:2045065:1
position: 2045065
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045241:1
position: 2045241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2045374-2045478:1:exon

position:2045374:1
position: 2045374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045478:1
position: 2045478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2045567-2045647:1:exon

position:2045567:1
position: 2045567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2045647:1
position: 2045647
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2045997-2046152:1:exon

position:2045997:1
position: 2045997
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2046152:1
position: 2046152
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2048012-2048177:1:exon

position:2048012:1
position: 2048012
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048177:1
position: 2048177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2048296-2048492:1:exon

position:2048296:1
position: 2048296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2048492:1
position: 2048492
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2050020-2050084:1:exon

position:2050020:1
position: 2050020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050084:1
position: 2050084
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2050391-2050586:1:exon

position:2050391:1
position: 2050391
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2050586:1
position: 2050586
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2051239-2051313:1:exon

position:2051239:1
position: 2051239
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051313:1
position: 2051313
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2051426-2051615:1:exon

position:2051426:1
position: 2051426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2051615:1
position: 2051615
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2053276-2053364:1:exon

position:2053276:1
position: 2053276
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2053364:1
position: 2053364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2053613-2053705:1:exon

position:2053613:1
position: 2053613
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2053705:1
position: 2053705
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2053829-2054020:1:exon

position:2053829:1
position: 2053829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2054020:1
position: 2054020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2054505-2054606:1:exon

position:2054505:1
position: 2054505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2054606:1
position: 2054606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2054707-2054807:1:exon

position:2054707:1
position: 2054707
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2054807:1
position: 2054807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2054975-2055110:1:exon

position:2054975:1
position: 2054975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629092
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629092
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:2040182..2040184,aa:OTHER)
product: LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
translation: MSRSLLSKKRRVSGPDSKLGSNCTPTXSVMFEVPSGPTYGMAQNSSEIYIDEGLYSRQLYVLGHEAMKHLQASSVLVSGLQGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVSTYTGPLVAEFLSAFQVVVLTNSPLEDQLQVGEFCHSRGIKLVVADTRGLFGQLFCDFGEEMILVDANGEQPLSAMVAMVTKDNPGVVICLDEARHGFESGDFVSFTEVQGMSELNGTHPIEIKVLDPYTFSICDTSSFSDYICGGIVSQVRVSKKISFKSLLASLSEPDFVITDFAKYSRPAQLHIGFQALHQFCTQHSRPPRPHNEEDATELVVLAQAVNAQSLPAVKQDNLDEDLIWKLAYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALECLPEDKVAFMEDRCLPRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLGCGDGGEITVTDMDTIEKSNLNRQFLFRPWDVTKSKSDTAAAAVRQINPRINVVSHWNRVGADTECIYDDDFFQNLDGVANALDNVIARLYMDCRCVYYRKPLLESGTLGTKGNVQVVIPFLTDSYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDPKFVERTLRLPGTQPWEVVKAVQRSLVLQRPESWADCVTWAFYHWHTQYTDNIRQLLHNFPPHQLTSSGVPFWSRPKRCPHPLTFDVNNPLHLDYVMAAANLFAQMYGLTGSQDRAAVSTLLQSVQVPEFIPKSGVQSRVSDQELQSTGASVDDTRLEELKAVLPSPDKLTGFKMYPIDFEKDDDSNFHMDFIMAASNLRAENYDIAPADRHKSKLIAGKIIPAIVTTTAAVVGLTCLELYKVVQGHQQLESYKNSFINLALPSFSFSEPLAPPHHEYHDQEWTLWDRFDVQGLQPNGEEMTLKQFLDYFKAEHKLEITMLSQGVSMLYSFFMPATKLKERLDQPMTEIVSRVSRKKLGRHVRSLVLELCCNDESGEDVEVPYVRYIIR
SIO_010081: LOC123629092
subclass of: SO_0000673
so part of: LOC123629092
location: join(2040104..2040220,2040349..2040407,2040489..2040657,2040752..2040886,2042233..2042339,2042594..2042684,2042791..2042923,2044596..2044693,2044783..2044929,2045065..2045241,2045374..2045478,2045567..2045647,2045997..2046152,2048012..2048177,2048296..2048492,2050020..2050084,2050391..2050586,2051239..2051313,2051426..2051615,2053276..2053364,2053613..2053705,2053829..2054020,2054505..2054606,2054707..2054807,2054975..2055110)
location: region:2040104-2055110:1
so has part: feature:2040104-2040220:1:exon
so has part: feature:2040349-2040407:1:exon
so has part: feature:2040489-2040657:1:exon
so has part: feature:2040752-2040886:1:exon
so has part: feature:2042233-2042339:1:exon
so has part: feature:2042594-2042684:1:exon
so has part: feature:2042791-2042923:1:exon
so has part: feature:2044596-2044693:1:exon
so has part: feature:2044783-2044929:1:exon
so has part: feature:2045065-2045241:1:exon
so has part: feature:2045374-2045478:1:exon
so has part: feature:2045567-2045647:1:exon
so has part: feature:2045997-2046152:1:exon
so has part: feature:2048012-2048177:1:exon
so has part: feature:2048296-2048492:1:exon
so has part: feature:2050020-2050084:1:exon
so has part: feature:2050391-2050586:1:exon
so has part: feature:2051239-2051313:1:exon
so has part: feature:2051426-2051615:1:exon
so has part: feature:2053276-2053364:1:exon
so has part: feature:2053613-2053705:1:exon
so has part: feature:2053829-2054020:1:exon
so has part: feature:2054505-2054606:1:exon
so has part: feature:2054707-2054807:1:exon
so has part: feature:2054975-2055110:1:exon

XP_045395006.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2040104-2040220:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2040349-2040407:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2040489-2040657:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2040752-2040886:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2042233-2042339:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2042594-2042684:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2042791-2042923:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2044596-2044693:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2044783-2044929:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2045065-2045241:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2045374-2045478:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2045567-2045647:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2045997-2046152:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2048012-2048177:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2048296-2048492:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2050020-2050084:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2050391-2050586:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2051239-2051313:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2051426-2051615:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2053276-2053364:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2053613-2053705:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2053829-2054020:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2054505-2054606:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2054707-2054807:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2054975-2055110:1:exon

LOC123629037
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2101940..2115800
location: region:2101940-2115800:1
so has part: feature:2101940-2115800:1:exon
subclass of: SO_0000010

123629037
type: Gene
SIO_000068: ncbigene

position:2101940:1
position: 2101940
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115800:1
position: 2115800
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2101940-2115800:1:exon

LOC123629037
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629037
product: ubiquitin carboxyl-terminal hydrolase 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045538969.1
SIO_010081: LOC123629037
subclass of: SO_0000673
so part of: LOC123629037
location: join(2101940..2102085,2104852..2104961,2105121..2105251,2105484..2105601,2108807..2108952,2109093..2109154,2109282..2109381,2109755..2109928,2110030..2110188,2110584..2110808,2110938..2111021,2111129..2111223,2111893..2112099,2112751..2112803,2112996..2113241,2113323..2113393,2114085..2114197,2114980..2115129,2115213..2115328,2115495..2115583,2115666..2115800)
location: region:2101940-2115800:1
so has part: feature:2101940-2102085:1:exon
so has part: feature:2104852-2104961:1:exon
so has part: feature:2105121-2105251:1:exon
so has part: feature:2105484-2105601:1:exon
so has part: feature:2108807-2108952:1:exon
so has part: feature:2109093-2109154:1:exon
so has part: feature:2109282-2109381:1:exon
so has part: feature:2109755-2109928:1:exon
so has part: feature:2110030-2110188:1:exon
so has part: feature:2110584-2110808:1:exon
so has part: feature:2110938-2111021:1:exon
so has part: feature:2111129-2111223:1:exon
so has part: feature:2111893-2112099:1:exon
so has part: feature:2112751-2112803:1:exon
so has part: feature:2112996-2113241:1:exon
so has part: feature:2113323-2113393:1:exon
so has part: feature:2114085-2114197:1:exon
so has part: feature:2114980-2115129:1:exon
so has part: feature:2115213-2115328:1:exon
so has part: feature:2115495-2115583:1:exon
so has part: feature:2115666-2115800:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2101940-2102085:1:exon

position:2102085:1
position: 2102085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2104852-2104961:1:exon

position:2104852:1
position: 2104852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2104961:1
position: 2104961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2105121-2105251:1:exon

position:2105121:1
position: 2105121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105251:1
position: 2105251
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2105484-2105601:1:exon

position:2105484:1
position: 2105484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2105601:1
position: 2105601
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2108807-2108952:1:exon

position:2108807:1
position: 2108807
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2108952:1
position: 2108952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2109093-2109154:1:exon

position:2109093:1
position: 2109093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109154:1
position: 2109154
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2109282-2109381:1:exon

position:2109282:1
position: 2109282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109381:1
position: 2109381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2109755-2109928:1:exon

position:2109755:1
position: 2109755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2109928:1
position: 2109928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2110030-2110188:1:exon

position:2110030:1
position: 2110030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110188:1
position: 2110188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2110584-2110808:1:exon

position:2110584:1
position: 2110584
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2110808:1
position: 2110808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2110938-2111021:1:exon

position:2110938:1
position: 2110938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111021:1
position: 2111021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2111129-2111223:1:exon

position:2111129:1
position: 2111129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2111223:1
position: 2111223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2111893-2112099:1:exon

position:2111893:1
position: 2111893
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112099:1
position: 2112099
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2112751-2112803:1:exon

position:2112751:1
position: 2112751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2112803:1
position: 2112803
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2112996-2113241:1:exon

position:2112996:1
position: 2112996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113241:1
position: 2113241
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2113323-2113393:1:exon

position:2113323:1
position: 2113323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2113393:1
position: 2113393
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2114085-2114197:1:exon

position:2114085:1
position: 2114085
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2114197:1
position: 2114197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2114980-2115129:1:exon

position:2114980:1
position: 2114980
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115129:1
position: 2115129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2115213-2115328:1:exon

position:2115213:1
position: 2115213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115328:1
position: 2115328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2115495-2115583:1:exon

position:2115495:1
position: 2115495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2115583:1
position: 2115583
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2115666-2115800:1:exon

position:2115666:1
position: 2115666
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629037
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629037
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 11-like
translation: MAAAEDSTAEADSVDREPQESAPTLASQWRRVENCEEGRERPLRPGESWFLVEQHWYKQWEVYVQGGNQDSSTFPGCINNAELFEDQVNWRLKEWLVEGEDYVLLPEAAWHQLVSWYGLKHDQPPIERKVVELASMRKVEVYPLELLLVQHSDMNTLHEAQFSHTDTVDLVLRTAREQFLVDPEEETRLWIKNSDGSFEHLHNTHDTVLDICLRPRQVVIMETRDKDGTWPSEKLHCMRSILEDDEDFEGQPGVCGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFCNPLGMKGEIAQAYADLVKQAWSGHHRSIVPHIFKSKVGHFASQFLGYQQHDLQEFLSFLLDGLHEDLNRVKKKEYVELCDASGRSDQEAAQEAWQNHKRWNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVSHDRILEVFFVSMDPKLRPEQHQLAVPKKGKIFDLCVALSEHIGVSPGRMMVANVFRHRFYKIYQVEESLSGILDRDDIFIYEVSDRPGKSEGTEEDIVLPVYLRERTPAQDYDDSYHGLMLFGYPLLVSVPRDQLTWDSLYHILLHRLSRYVTRPNSDDEDSGDEKDTEEKDNISKAGKTAGDSPQDPDPEHTRARSRVWGGRQAPSGSSPGPSRPPRKLLFTLQTVNSNGTSDCSAISEDGQRVSFSSQPYIAIDWEPEMKKRYYDEVEAEDFVKHDCIGYVLKKSPVWLQECIELFTTVETLEEENLWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTMFSCKKLETLVEFPVRDLDFSEFVIKPQSESDPVLYKYDLIAVSNHYGGLRDGHYTTFARNKDSGQWHYFDDNSVSPAAESQMKSKAAYVLFYQRQDTAQCFSSPPAPGPKASPAQGFLSCSESVDVD
SIO_010081: LOC123629037
subclass of: SO_0000673
so part of: LOC123629037
location: join(2101940..2102085,2104852..2104961,2105121..2105251,2105484..2105601,2108807..2108952,2109093..2109154,2109282..2109381,2109755..2109928,2110030..2110188,2110584..2110808,2110938..2111021,2111129..2111223,2111893..2112099,2112751..2112803,2112996..2113241,2113323..2113393,2114085..2114197,2114980..2115129,2115213..2115328,2115495..2115583,2115666..2115800)
location: region:2101940-2115800:1
so has part: feature:2101940-2102085:1:exon
so has part: feature:2104852-2104961:1:exon
so has part: feature:2105121-2105251:1:exon
so has part: feature:2105484-2105601:1:exon
so has part: feature:2108807-2108952:1:exon
so has part: feature:2109093-2109154:1:exon
so has part: feature:2109282-2109381:1:exon
so has part: feature:2109755-2109928:1:exon
so has part: feature:2110030-2110188:1:exon
so has part: feature:2110584-2110808:1:exon
so has part: feature:2110938-2111021:1:exon
so has part: feature:2111129-2111223:1:exon
so has part: feature:2111893-2112099:1:exon
so has part: feature:2112751-2112803:1:exon
so has part: feature:2112996-2113241:1:exon
so has part: feature:2113323-2113393:1:exon
so has part: feature:2114085-2114197:1:exon
so has part: feature:2114980-2115129:1:exon
so has part: feature:2115213-2115328:1:exon
so has part: feature:2115495-2115583:1:exon
so has part: feature:2115666-2115800:1:exon

XP_045394925.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2101940-2102085:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2104852-2104961:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2105121-2105251:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2105484-2105601:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2108807-2108952:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2109093-2109154:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2109282-2109381:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2109755-2109928:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2110030-2110188:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2110584-2110808:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2110938-2111021:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2111129-2111223:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2111893-2112099:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2112751-2112803:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2112996-2113241:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2113323-2113393:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2114085-2114197:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2114980-2115129:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2115213-2115328:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2115495-2115583:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2115666-2115800:1:exon

LOC123629093
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629093
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2221020..2236027)
location: region:2221020-2236027:-1
so has part: feature:2221020-2236027:-1:exon
subclass of: SO_0000010

123629093
type: Gene
SIO_000068: ncbigene

position:2221020:-1
position: 2221020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2236027:-1
position: 2236027
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2221020-2236027:-1:exon

LOC123629093
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629093
product: ubiquitin-like modifier-activating enzyme 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 56 Proteins, and 1% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045539051.1
SIO_010081: LOC123629093
subclass of: SO_0000673
so part of: LOC123629093
location: complement(join(2221020..2221155,2221323..2221423,2221524..2221625,2222110..2222301,2222425..2222517,2222766..2222854,2224515..2224704,2224817..2224891,2225544..2225739,2226046..2226110,2227638..2227834,2227953..2228118,2229978..2230133,2230483..2230563,2230652..2230756,2230889..2231065,2231201..2231347,2231437..2231534,2233207..2233339,2233445..2233535,2233790..2233896,2235245..2235379,2235474..2235642,2235724..2235782,2235911..2236027))
location: region:2221020-2236027:-1
so has part: feature:2235911-2236027:-1:exon
so has part: feature:2235724-2235782:-1:exon
so has part: feature:2235474-2235642:-1:exon
so has part: feature:2235245-2235379:-1:exon
so has part: feature:2233790-2233896:-1:exon
so has part: feature:2233445-2233535:-1:exon
so has part: feature:2233207-2233339:-1:exon
so has part: feature:2231437-2231534:-1:exon
so has part: feature:2231201-2231347:-1:exon
so has part: feature:2230889-2231065:-1:exon
so has part: feature:2230652-2230756:-1:exon
so has part: feature:2230483-2230563:-1:exon
so has part: feature:2229978-2230133:-1:exon
so has part: feature:2227953-2228118:-1:exon
so has part: feature:2227638-2227834:-1:exon
so has part: feature:2226046-2226110:-1:exon
so has part: feature:2225544-2225739:-1:exon
so has part: feature:2224817-2224891:-1:exon
so has part: feature:2224515-2224704:-1:exon
so has part: feature:2222766-2222854:-1:exon
so has part: feature:2222425-2222517:-1:exon
so has part: feature:2222110-2222301:-1:exon
so has part: feature:2221524-2221625:-1:exon
so has part: feature:2221323-2221423:-1:exon
so has part: feature:2221020-2221155:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2235911-2236027:-1:exon

position:2235911:-1
position: 2235911
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2235724-2235782:-1:exon

position:2235724:-1
position: 2235724
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235782:-1
position: 2235782
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2235474-2235642:-1:exon

position:2235474:-1
position: 2235474
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235642:-1
position: 2235642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2235245-2235379:-1:exon

position:2235245:-1
position: 2235245
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2235379:-1
position: 2235379
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2233790-2233896:-1:exon

position:2233790:-1
position: 2233790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233896:-1
position: 2233896
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2233445-2233535:-1:exon

position:2233445:-1
position: 2233445
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233535:-1
position: 2233535
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2233207-2233339:-1:exon

position:2233207:-1
position: 2233207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2233339:-1
position: 2233339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2231437-2231534:-1:exon

position:2231437:-1
position: 2231437
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231534:-1
position: 2231534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2231201-2231347:-1:exon

position:2231201:-1
position: 2231201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231347:-1
position: 2231347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2230889-2231065:-1:exon

position:2230889:-1
position: 2230889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2231065:-1
position: 2231065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2230652-2230756:-1:exon

position:2230652:-1
position: 2230652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230756:-1
position: 2230756
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2230483-2230563:-1:exon

position:2230483:-1
position: 2230483
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230563:-1
position: 2230563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2229978-2230133:-1:exon

position:2229978:-1
position: 2229978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2230133:-1
position: 2230133
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2227953-2228118:-1:exon

position:2227953:-1
position: 2227953
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2228118:-1
position: 2228118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2227638-2227834:-1:exon

position:2227638:-1
position: 2227638
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2227834:-1
position: 2227834
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2226046-2226110:-1:exon

position:2226046:-1
position: 2226046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2226110:-1
position: 2226110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2225544-2225739:-1:exon

position:2225544:-1
position: 2225544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2225739:-1
position: 2225739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2224817-2224891:-1:exon

position:2224817:-1
position: 2224817
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224891:-1
position: 2224891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2224515-2224704:-1:exon

position:2224515:-1
position: 2224515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2224704:-1
position: 2224704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2222766-2222854:-1:exon

position:2222766:-1
position: 2222766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222854:-1
position: 2222854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2222425-2222517:-1:exon

position:2222425:-1
position: 2222425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222517:-1
position: 2222517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:2222110-2222301:-1:exon

position:2222110:-1
position: 2222110
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2222301:-1
position: 2222301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:2221524-2221625:-1:exon

position:2221524:-1
position: 2221524
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2221625:-1
position: 2221625
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:2221323-2221423:-1:exon

position:2221323:-1
position: 2221323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2221423:-1
position: 2221423
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:2221020-2221155:-1:exon

position:2221155:-1
position: 2221155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629093
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629093
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:complement(2235947..2235949),aa:OTHER)
product: LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
translation: MSRSLLSKKRRVSGPDSKLGSNCTPTXSVMFEVPSGPTYGMAQNSSEIYIDEGLYSRQLYVLGHEAMKHLQASSVLVSGLQGLGVEIAKNIILGGVKAVTLHDQGTAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVSTYTGPLVAEFLSAFQVVVLTNSPLEDQLQVGEFCHSRGIKLVVADTRGLFGQLFCDFGEEMILVDANGEQPLSAMVAMVTKDNPGVVICLDEARHGFESGDFVSFTEVQGMSELNGTHPIEIKVLDPYTFSICDTSSFSDYICGGIVSQVRVSKKISFKSLLASLSEPDFVITDFAKYSRPAQLHIGFQALHQFCTQHSRPPRPHNEEDATELVVLAQAVNAQSLPAVKQDNLDEDLIRKLAYVAAGDLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDALECLPEDKVAFMEDRCLPRQNRYDGQVAVFGSDLQEKLGKQKYFLVGAGAIGCELLKNFAMIGLGCGDGGEITVTDMDTIEKSNLNRQFLFRPWDVTKSKSDTAAAAVRQINPRINVVSHWNRVGADTECIYDDDFFQNLDGVANALDNVIARLYMDCRCVYYRKPLLESGTLGTKGNVQVVIPFLTDSYSSSQDPPEKSIPICTLKNFPNAIEHTLQWARDEFEGLFKQPAENVNQYLTDPKFVERTLRLPGTQPWEVVKAVQRSLVLQRPESWADCVTWAFYHWHTQYTDNIRQLLHNFPPHQLTSSGVPFWSRPKRCPHPLTFDVNNPLHLDYVMAAANLFAQMYGLTGSQDRAAVSTLLQSVQVPEFIPKSGVQSRVSDQELQSTGASVDDTRLEELKAVLPSPDKLTGFKMYPIDFEKDDDSNFHMDFIMAASNLRAENYDIAPADRHKSKLIAGKIIPAIVTTTAAVVGLTCLELYKVVQGHQQLESYKNSFINLALPSFSFSEPLAPPHHEYYDQEWTLWDRFDVQGLQPNGEEMTLKQFLDYFKAEHKLEITMLSQGVSMLYSFFMPATKLKERLDQPMTEIVSRVSRKKLGRHVRSLVLELCCNDESGEDVEVPYVRYIIR
SIO_010081: LOC123629093
subclass of: SO_0000673
so part of: LOC123629093
location: complement(join(2221020..2221155,2221323..2221423,2221524..2221625,2222110..2222301,2222425..2222517,2222766..2222854,2224515..2224704,2224817..2224891,2225544..2225739,2226046..2226110,2227638..2227834,2227953..2228118,2229978..2230133,2230483..2230563,2230652..2230756,2230889..2231065,2231201..2231347,2231437..2231534,2233207..2233339,2233445..2233535,2233790..2233896,2235245..2235379,2235474..2235642,2235724..2235782,2235911..2236027))
location: region:2221020-2236027:-1
so has part: feature:2235911-2236027:-1:exon
so has part: feature:2235724-2235782:-1:exon
so has part: feature:2235474-2235642:-1:exon
so has part: feature:2235245-2235379:-1:exon
so has part: feature:2233790-2233896:-1:exon
so has part: feature:2233445-2233535:-1:exon
so has part: feature:2233207-2233339:-1:exon
so has part: feature:2231437-2231534:-1:exon
so has part: feature:2231201-2231347:-1:exon
so has part: feature:2230889-2231065:-1:exon
so has part: feature:2230652-2230756:-1:exon
so has part: feature:2230483-2230563:-1:exon
so has part: feature:2229978-2230133:-1:exon
so has part: feature:2227953-2228118:-1:exon
so has part: feature:2227638-2227834:-1:exon
so has part: feature:2226046-2226110:-1:exon
so has part: feature:2225544-2225739:-1:exon
so has part: feature:2224817-2224891:-1:exon
so has part: feature:2224515-2224704:-1:exon
so has part: feature:2222766-2222854:-1:exon
so has part: feature:2222425-2222517:-1:exon
so has part: feature:2222110-2222301:-1:exon
so has part: feature:2221524-2221625:-1:exon
so has part: feature:2221323-2221423:-1:exon
so has part: feature:2221020-2221155:-1:exon

XP_045395007.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2235911-2236027:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2235724-2235782:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2235474-2235642:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2235245-2235379:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2233790-2233896:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2233445-2233535:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2233207-2233339:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2231437-2231534:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2231201-2231347:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2230889-2231065:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2230652-2230756:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2230483-2230563:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2229978-2230133:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2227953-2228118:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2227638-2227834:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2226046-2226110:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2225544-2225739:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2224817-2224891:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2224515-2224704:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2222766-2222854:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2222425-2222517:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:2222110-2222301:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:2221524-2221625:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:2221323-2221423:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:2221020-2221155:-1:exon

LOC123629038
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(2273844..2287692)
location: region:2273844-2287692:-1
so has part: feature:2273844-2287692:-1:exon
subclass of: SO_0000010

123629038
type: Gene
SIO_000068: ncbigene

position:2273844:-1
position: 2273844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2287692:-1
position: 2287692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2273844-2287692:-1:exon

LOC123629038
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629038
product: ubiquitin carboxyl-terminal hydrolase 11-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045538970.1
SIO_010081: LOC123629038
subclass of: SO_0000673
so part of: LOC123629038
location: complement(join(2273844..2273978,2274061..2274149,2274316..2274431,2274515..2274664,2275447..2275559,2276251..2276321,2276403..2276648,2276841..2276893,2277533..2277739,2278409..2278503,2278611..2278694,2278824..2279048,2279444..2279602,2279704..2279877,2280251..2280350,2280478..2280539,2280680..2280825,2284031..2284148,2284381..2284511,2284671..2284780,2287547..2287692))
location: region:2273844-2287692:-1
so has part: feature:2287547-2287692:-1:exon
so has part: feature:2284671-2284780:-1:exon
so has part: feature:2284381-2284511:-1:exon
so has part: feature:2284031-2284148:-1:exon
so has part: feature:2280680-2280825:-1:exon
so has part: feature:2280478-2280539:-1:exon
so has part: feature:2280251-2280350:-1:exon
so has part: feature:2279704-2279877:-1:exon
so has part: feature:2279444-2279602:-1:exon
so has part: feature:2278824-2279048:-1:exon
so has part: feature:2278611-2278694:-1:exon
so has part: feature:2278409-2278503:-1:exon
so has part: feature:2277533-2277739:-1:exon
so has part: feature:2276841-2276893:-1:exon
so has part: feature:2276403-2276648:-1:exon
so has part: feature:2276251-2276321:-1:exon
so has part: feature:2275447-2275559:-1:exon
so has part: feature:2274515-2274664:-1:exon
so has part: feature:2274316-2274431:-1:exon
so has part: feature:2274061-2274149:-1:exon
so has part: feature:2273844-2273978:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2287547-2287692:-1:exon

position:2287547:-1
position: 2287547
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2284671-2284780:-1:exon

position:2284671:-1
position: 2284671
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2284780:-1
position: 2284780
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2284381-2284511:-1:exon

position:2284381:-1
position: 2284381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2284511:-1
position: 2284511
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2284031-2284148:-1:exon

position:2284031:-1
position: 2284031
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2284148:-1
position: 2284148
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2280680-2280825:-1:exon

position:2280680:-1
position: 2280680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2280825:-1
position: 2280825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2280478-2280539:-1:exon

position:2280478:-1
position: 2280478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2280539:-1
position: 2280539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2280251-2280350:-1:exon

position:2280251:-1
position: 2280251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2280350:-1
position: 2280350
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2279704-2279877:-1:exon

position:2279704:-1
position: 2279704
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2279877:-1
position: 2279877
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2279444-2279602:-1:exon

position:2279444:-1
position: 2279444
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2279602:-1
position: 2279602
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2278824-2279048:-1:exon

position:2278824:-1
position: 2278824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2279048:-1
position: 2279048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2278611-2278694:-1:exon

position:2278611:-1
position: 2278611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2278694:-1
position: 2278694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2278409-2278503:-1:exon

position:2278409:-1
position: 2278409
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2278503:-1
position: 2278503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2277533-2277739:-1:exon

position:2277533:-1
position: 2277533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2277739:-1
position: 2277739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2276841-2276893:-1:exon

position:2276841:-1
position: 2276841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2276893:-1
position: 2276893
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2276403-2276648:-1:exon

position:2276403:-1
position: 2276403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2276648:-1
position: 2276648
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2276251-2276321:-1:exon

position:2276251:-1
position: 2276251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2276321:-1
position: 2276321
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2275447-2275559:-1:exon

position:2275447:-1
position: 2275447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2275559:-1
position: 2275559
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:2274515-2274664:-1:exon

position:2274515:-1
position: 2274515
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274664:-1
position: 2274664
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:2274316-2274431:-1:exon

position:2274316:-1
position: 2274316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274431:-1
position: 2274431
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:2274061-2274149:-1:exon

position:2274061:-1
position: 2274061
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:2274149:-1
position: 2274149
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:2273844-2273978:-1:exon

position:2273978:-1
position: 2273978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629038
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629038
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin carboxyl-terminal hydrolase 11-like
translation: MAAAEDSTAEADSVDREPQESAPTLASQWRRVENCEEGRERPLRPGESWFLVEQHWYKQWEVYVQGGNQDSSTFPGCINNAELFEDQVNWRLKEWLVEGEDYVLLPEAAWHQLVSWYGLKHDQPPIERKVVELASMRKVEVYPLELLLVQHSDMNTLHEAQFSHTDTVDLVLRTAREQFLVDPEEETRLWIKNSDGSFEHLHNTHDTVLDICLRPRQVVIMETRDKDGTWPSEKLHCMRSILEDDEDFEGQPGVCGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFCNPLGMKGEIAQAYADLVKQAWSGHHRSIVPHIFKSKVGHFASQFLGYQQHDLQEFLSFLLDGLHEDLNRVKKKEYVELCDASGRSDQEAAQEAWQNHKRWNDSVIVDTFHGLFKSTLVCPDCGNVSVTFDPFCYLSVPLPVSHDRILEVFFVSMDPKLRPEQHQLAVPKKGKIFDLCVALSEHIGVSPGRMMVANVFRHRFYKIYQVEESLSGILDRDDIFIYEVSDRPGKSEGTEEDIVLPVYLRERTPAQDYDDSYHGLMLFGYPLLVSVPRDQLTWDSLYHILLHRLSRYVTRPNSDDEDSGDEKDTEEKDNISKAGKTAGDSPQDPDPEHTRARSRVWGGRQAPSGSSPGPSRPPRKLLFTLQTVNSNGTSDCSAISEDGQRVSFSSQPYIAIDWEPEMKKRYYDEVEAEDFVKHDCIGYVLKKSPVRLQECIELFTTVETLEEENLWYCPTCKQHQLATKKLDLWMLPETLIIHLKRFSYTMFSCKKLETLVEFPVRDLDFSEFVIKPQSESDPVLYKYDLIAVSNHYGGLRDGHYTTFARNKDSGQWHYFDDNSVSPAAESQMKSKAAYVLFYQRQDTAQCFSSPPAPGPKASPAQGFLSCSESVDVD
SIO_010081: LOC123629038
subclass of: SO_0000673
so part of: LOC123629038
location: complement(join(2273844..2273978,2274061..2274149,2274316..2274431,2274515..2274664,2275447..2275559,2276251..2276321,2276403..2276648,2276841..2276893,2277533..2277739,2278409..2278503,2278611..2278694,2278824..2279048,2279444..2279602,2279704..2279877,2280251..2280350,2280478..2280539,2280680..2280825,2284031..2284148,2284381..2284511,2284671..2284780,2287547..2287692))
location: region:2273844-2287692:-1
so has part: feature:2287547-2287692:-1:exon
so has part: feature:2284671-2284780:-1:exon
so has part: feature:2284381-2284511:-1:exon
so has part: feature:2284031-2284148:-1:exon
so has part: feature:2280680-2280825:-1:exon
so has part: feature:2280478-2280539:-1:exon
so has part: feature:2280251-2280350:-1:exon
so has part: feature:2279704-2279877:-1:exon
so has part: feature:2279444-2279602:-1:exon
so has part: feature:2278824-2279048:-1:exon
so has part: feature:2278611-2278694:-1:exon
so has part: feature:2278409-2278503:-1:exon
so has part: feature:2277533-2277739:-1:exon
so has part: feature:2276841-2276893:-1:exon
so has part: feature:2276403-2276648:-1:exon
so has part: feature:2276251-2276321:-1:exon
so has part: feature:2275447-2275559:-1:exon
so has part: feature:2274515-2274664:-1:exon
so has part: feature:2274316-2274431:-1:exon
so has part: feature:2274061-2274149:-1:exon
so has part: feature:2273844-2273978:-1:exon

XP_045394926.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2287547-2287692:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2284671-2284780:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2284381-2284511:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2284031-2284148:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2280680-2280825:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2280478-2280539:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2280251-2280350:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2279704-2279877:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2279444-2279602:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2278824-2279048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2278611-2278694:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2278409-2278503:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2277533-2277739:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2276841-2276893:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2276403-2276648:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2276251-2276321:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2275447-2275559:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2274515-2274664:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:2274316-2274431:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:2274061-2274149:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:2273844-2273978:-1:exon

LOC123629094
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2539625..2731566
location: region:2539625-2731566:1
so has part: feature:2539625-2731566:1:exon
subclass of: SO_0000010

123629094
type: Gene
SIO_000068: ncbigene

position:2539625:1
position: 2539625
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2731566:1
position: 2731566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2539625-2731566:1:exon

LOC123629094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629094
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539054.1
SIO_010081: LOC123629094
subclass of: SO_0000673
so part of: LOC123629094
location: join(2539625..2539708,2611397..2611470,2659589..2659677,2671095..2671202,2696557..2696702,2699567..2699837,2703735..2703867,2704148..2704289,2710580..2710643,2710747..2710844,2714042..2714102,2718609..2718730,2722006..2722080,2722357..2722484,2724353..2724518,2726690..2726791,2728028..2731566)
location: region:2539625-2731566:1
so has part: feature:2539625-2539708:1:exon
so has part: feature:2611397-2611470:1:exon
so has part: feature:2659589-2659677:1:exon
so has part: feature:2671095-2671202:1:exon
so has part: feature:2696557-2696702:1:exon
so has part: feature:2699567-2699837:1:exon
so has part: feature:2703735-2703867:1:exon
so has part: feature:2704148-2704289:1:exon
so has part: feature:2710580-2710643:1:exon
so has part: feature:2710747-2710844:1:exon
so has part: feature:2714042-2714102:1:exon
so has part: feature:2718609-2718730:1:exon
so has part: feature:2722006-2722080:1:exon
so has part: feature:2722357-2722484:1:exon
so has part: feature:2724353-2724518:1:exon
so has part: feature:2726690-2726791:1:exon
so has part: feature:2728028-2731566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2539625-2539708:1:exon

position:2539708:1
position: 2539708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2611397-2611470:1:exon

position:2611397:1
position: 2611397
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2611470:1
position: 2611470
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2659589-2659677:1:exon

position:2659589:1
position: 2659589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2659677:1
position: 2659677
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2671095-2671202:1:exon

position:2671095:1
position: 2671095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2671202:1
position: 2671202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2696557-2696702:1:exon

position:2696557:1
position: 2696557
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2696702:1
position: 2696702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2699567-2699837:1:exon

position:2699567:1
position: 2699567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2699837:1
position: 2699837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2703735-2703867:1:exon

position:2703735:1
position: 2703735
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2703867:1
position: 2703867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:2704148-2704289:1:exon

position:2704148:1
position: 2704148
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2704289:1
position: 2704289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:2710580-2710643:1:exon

position:2710580:1
position: 2710580
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710643:1
position: 2710643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:2710747-2710844:1:exon

position:2710747:1
position: 2710747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2710844:1
position: 2710844
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:2714042-2714102:1:exon

position:2714042:1
position: 2714042
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2714102:1
position: 2714102
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:2718609-2718730:1:exon

position:2718609:1
position: 2718609
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2718730:1
position: 2718730
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:2722006-2722080:1:exon

position:2722006:1
position: 2722006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722080:1
position: 2722080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:2722357-2722484:1:exon

position:2722357:1
position: 2722357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2722484:1
position: 2722484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:2724353-2724518:1:exon

position:2724353:1
position: 2724353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2724518:1
position: 2724518
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:2726690-2726791:1:exon

position:2726690:1
position: 2726690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2726791:1
position: 2726791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:2728028-2731566:1:exon

position:2728028:1
position: 2728028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629094
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539053.1
SIO_010081: LOC123629094
subclass of: SO_0000673
so part of: LOC123629094
location: join(2539649..2539708,2547290..2547413,2611397..2611470,2659589..2659677,2671095..2671202,2696557..2696702,2699567..2699837,2703735..2703867,2704148..2704289,2710580..2710643,2710747..2710844,2714042..2714102,2718609..2718730,2722006..2722080,2722357..2722484,2724353..2724518,2726690..2726791,2728028..2731566)
location: region:2539649-2731566:1
so has part: feature:2539649-2539708:1:exon
so has part: feature:2547290-2547413:1:exon
so has part: feature:2611397-2611470:1:exon
so has part: feature:2659589-2659677:1:exon
so has part: feature:2671095-2671202:1:exon
so has part: feature:2696557-2696702:1:exon
so has part: feature:2699567-2699837:1:exon
so has part: feature:2703735-2703867:1:exon
so has part: feature:2704148-2704289:1:exon
so has part: feature:2710580-2710643:1:exon
so has part: feature:2710747-2710844:1:exon
so has part: feature:2714042-2714102:1:exon
so has part: feature:2718609-2718730:1:exon
so has part: feature:2722006-2722080:1:exon
so has part: feature:2722357-2722484:1:exon
so has part: feature:2724353-2724518:1:exon
so has part: feature:2726690-2726791:1:exon
so has part: feature:2728028-2731566:1:exon

position:2539649:1
position: 2539649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2539649-2539708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2547290-2547413:1:exon

position:2547290:1
position: 2547290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2547413:1
position: 2547413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2611397-2611470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2659589-2659677:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2671095-2671202:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2696557-2696702:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2699567-2699837:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2703735-2703867:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2704148-2704289:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2710580-2710643:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2710747-2710844:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2714042-2714102:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2718609-2718730:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2722006-2722080:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2722357-2722484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2724353-2724518:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2726690-2726791:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:2728028-2731566:1:exon

LOC123629094
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629094
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539055.1
SIO_010081: LOC123629094
subclass of: SO_0000673
so part of: LOC123629094
location: join(2539649..2539708,2547290..2547413,2611397..2611470,2671095..2671202,2696557..2696702,2699567..2699837,2703735..2703867,2704148..2704289,2710580..2710643,2710747..2710844,2714042..2714102,2718609..2718730,2722006..2722080,2722357..2722484,2724353..2724518,2726690..2726791,2728028..2731566)
location: region:2539649-2731566:1
so has part: feature:2539649-2539708:1:exon
so has part: feature:2547290-2547413:1:exon
so has part: feature:2611397-2611470:1:exon
so has part: feature:2671095-2671202:1:exon
so has part: feature:2696557-2696702:1:exon
so has part: feature:2699567-2699837:1:exon
so has part: feature:2703735-2703867:1:exon
so has part: feature:2704148-2704289:1:exon
so has part: feature:2710580-2710643:1:exon
so has part: feature:2710747-2710844:1:exon
so has part: feature:2714042-2714102:1:exon
so has part: feature:2718609-2718730:1:exon
so has part: feature:2722006-2722080:1:exon
so has part: feature:2722357-2722484:1:exon
so has part: feature:2724353-2724518:1:exon
so has part: feature:2726690-2726791:1:exon
so has part: feature:2728028-2731566:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2539649-2539708:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2547290-2547413:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2611397-2611470:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2671095-2671202:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2696557-2696702:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2699567-2699837:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2703735-2703867:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2704148-2704289:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2710580-2710643:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2710747-2710844:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2714042-2714102:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2718609-2718730:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2722006-2722080:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2722357-2722484:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:2724353-2724518:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:2726690-2726791:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:2728028-2731566:1:exon

LOC123629094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAAAAVAAAAATATMATAAVSQQNPPKNGEATVNGEENGTHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSSGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHICRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSSPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC123629094
subclass of: SO_0000673
so part of: LOC123629094
location: join(2671145..2671202,2696557..2696702,2699567..2699837,2703735..2703867,2704148..2704289,2710580..2710643,2710747..2710844,2714042..2714102,2718609..2718730,2722006..2722080,2722357..2722484,2724353..2724518,2726690..2726791,2728028..2728054)
location: region:2671145-2728054:1
so has part: feature:2671145-2671202:1:exon
so has part: feature:2696557-2696702:1:exon
so has part: feature:2699567-2699837:1:exon
so has part: feature:2703735-2703867:1:exon
so has part: feature:2704148-2704289:1:exon
so has part: feature:2710580-2710643:1:exon
so has part: feature:2710747-2710844:1:exon
so has part: feature:2714042-2714102:1:exon
so has part: feature:2718609-2718730:1:exon
so has part: feature:2722006-2722080:1:exon
so has part: feature:2722357-2722484:1:exon
so has part: feature:2724353-2724518:1:exon
so has part: feature:2726690-2726791:1:exon
so has part: feature:2728028-2728054:1:exon

XP_045395009.1
type: Protein
SIO_000068: ncbiprotein

position:2671145:1
position: 2671145
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2728054:1
position: 2728054
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2671145-2671202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2696557-2696702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2699567-2699837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2703735-2703867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704148-2704289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2710580-2710643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2710747-2710844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2714042-2714102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2718609-2718730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2722006-2722080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722357-2722484:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2724353-2724518:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2726690-2726791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728028-2728054:1:exon

LOC123629094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAAAAVAAAAATATMATAAVSQQNPPKNGEATVNGEENGTHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSSGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHICRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSSPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC123629094
subclass of: SO_0000673
so part of: LOC123629094
location: join(2671145..2671202,2696557..2696702,2699567..2699837,2703735..2703867,2704148..2704289,2710580..2710643,2710747..2710844,2714042..2714102,2718609..2718730,2722006..2722080,2722357..2722484,2724353..2724518,2726690..2726791,2728028..2728054)
location: region:2671145-2728054:1
so has part: feature:2671145-2671202:1:exon
so has part: feature:2696557-2696702:1:exon
so has part: feature:2699567-2699837:1:exon
so has part: feature:2703735-2703867:1:exon
so has part: feature:2704148-2704289:1:exon
so has part: feature:2710580-2710643:1:exon
so has part: feature:2710747-2710844:1:exon
so has part: feature:2714042-2714102:1:exon
so has part: feature:2718609-2718730:1:exon
so has part: feature:2722006-2722080:1:exon
so has part: feature:2722357-2722484:1:exon
so has part: feature:2724353-2724518:1:exon
so has part: feature:2726690-2726791:1:exon
so has part: feature:2728028-2728054:1:exon

XP_045395010.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2671145-2671202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2696557-2696702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2699567-2699837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2703735-2703867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704148-2704289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2710580-2710643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2710747-2710844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2714042-2714102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2718609-2718730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2722006-2722080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722357-2722484:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2724353-2724518:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2726690-2726791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728028-2728054:1:exon

LOC123629094
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629094
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAAAAVAAAAATATMATAAVSQQNPPKNGEATVNGEENGTHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSSGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHICRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSSPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC123629094
subclass of: SO_0000673
so part of: LOC123629094
location: join(2671145..2671202,2696557..2696702,2699567..2699837,2703735..2703867,2704148..2704289,2710580..2710643,2710747..2710844,2714042..2714102,2718609..2718730,2722006..2722080,2722357..2722484,2724353..2724518,2726690..2726791,2728028..2728054)
location: region:2671145-2728054:1
so has part: feature:2671145-2671202:1:exon
so has part: feature:2696557-2696702:1:exon
so has part: feature:2699567-2699837:1:exon
so has part: feature:2703735-2703867:1:exon
so has part: feature:2704148-2704289:1:exon
so has part: feature:2710580-2710643:1:exon
so has part: feature:2710747-2710844:1:exon
so has part: feature:2714042-2714102:1:exon
so has part: feature:2718609-2718730:1:exon
so has part: feature:2722006-2722080:1:exon
so has part: feature:2722357-2722484:1:exon
so has part: feature:2724353-2724518:1:exon
so has part: feature:2726690-2726791:1:exon
so has part: feature:2728028-2728054:1:exon

XP_045395011.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2671145-2671202:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2696557-2696702:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2699567-2699837:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2703735-2703867:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2704148-2704289:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2710580-2710643:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2710747-2710844:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:2714042-2714102:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:2718609-2718730:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:2722006-2722080:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:2722357-2722484:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:2724353-2724518:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:2726690-2726791:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:2728028-2728054:1:exon

LOC123629050
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2798685..4008401
location: region:2798685-4008401:1
so has part: feature:2798685-4008401:1:exon
subclass of: SO_0000010

123629050
type: Gene
SIO_000068: ncbigene

position:2798685:1
position: 2798685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4008401:1
position: 4008401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2798685-4008401:1:exon

LOC123629050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629050
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 24 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045538982.1
SIO_010081: LOC123629050
subclass of: SO_0000673
so part of: LOC123629050
location: join(2798685..2798758,2846875..2846963,2858378..2858485,2883843..2883988,2886853..2887123,2891021..2891153,2891434..2891575,3990261..3990324,3990428..3990525,3993727..3993787,3998295..3998416,4001690..4001764,4002041..4002168,4004037..4004202,4006374..4006475,4007712..4008401)
location: region:2798685-4008401:1
so has part: feature:2798685-2798758:1:exon
so has part: feature:2846875-2846963:1:exon
so has part: feature:2858378-2858485:1:exon
so has part: feature:2883843-2883988:1:exon
so has part: feature:2886853-2887123:1:exon
so has part: feature:2891021-2891153:1:exon
so has part: feature:2891434-2891575:1:exon
so has part: feature:3990261-3990324:1:exon
so has part: feature:3990428-3990525:1:exon
so has part: feature:3993727-3993787:1:exon
so has part: feature:3998295-3998416:1:exon
so has part: feature:4001690-4001764:1:exon
so has part: feature:4002041-4002168:1:exon
so has part: feature:4004037-4004202:1:exon
so has part: feature:4006374-4006475:1:exon
so has part: feature:4007712-4008401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2798685-2798758:1:exon

position:2798758:1
position: 2798758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2846875-2846963:1:exon

position:2846875:1
position: 2846875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2846963:1
position: 2846963
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2858378-2858485:1:exon

position:2858378:1
position: 2858378
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2858485:1
position: 2858485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2883843-2883988:1:exon

position:2883843:1
position: 2883843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2883988:1
position: 2883988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2886853-2887123:1:exon

position:2886853:1
position: 2886853
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2887123:1
position: 2887123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2891021-2891153:1:exon

position:2891021:1
position: 2891021
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891153:1
position: 2891153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2891434-2891575:1:exon

position:2891434:1
position: 2891434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2891575:1
position: 2891575
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3990261-3990324:1:exon

position:3990261:1
position: 3990261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3990324:1
position: 3990324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3990428-3990525:1:exon

position:3990428:1
position: 3990428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3990525:1
position: 3990525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3993727-3993787:1:exon

position:3993727:1
position: 3993727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3993787:1
position: 3993787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:3998295-3998416:1:exon

position:3998295:1
position: 3998295
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3998416:1
position: 3998416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4001690-4001764:1:exon

position:4001690:1
position: 4001690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4001764:1
position: 4001764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4002041-4002168:1:exon

position:4002041:1
position: 4002041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4002168:1
position: 4002168
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4004037-4004202:1:exon

position:4004037:1
position: 4004037
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4004202:1
position: 4004202
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4006374-4006475:1:exon

position:4006374:1
position: 4006374
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4006475:1
position: 4006475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4007712-4008401:1:exon

position:4007712:1
position: 4007712
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629050
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629050
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 26 ESTs, 28 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045538983.1
SIO_010081: LOC123629050
subclass of: SO_0000673
so part of: LOC123629050
location: join(2798685..2798758,2858378..2858485,2883843..2883988,2886853..2887123,2891021..2891153,2891434..2891575,3990261..3990324,3990428..3990525,3993727..3993787,3998295..3998416,4001690..4001764,4002041..4002168,4004037..4004202,4006374..4006475,4007712..4008401)
location: region:2798685-4008401:1
so has part: feature:2798685-2798758:1:exon
so has part: feature:2858378-2858485:1:exon
so has part: feature:2883843-2883988:1:exon
so has part: feature:2886853-2887123:1:exon
so has part: feature:2891021-2891153:1:exon
so has part: feature:2891434-2891575:1:exon
so has part: feature:3990261-3990324:1:exon
so has part: feature:3990428-3990525:1:exon
so has part: feature:3993727-3993787:1:exon
so has part: feature:3998295-3998416:1:exon
so has part: feature:4001690-4001764:1:exon
so has part: feature:4002041-4002168:1:exon
so has part: feature:4004037-4004202:1:exon
so has part: feature:4006374-4006475:1:exon
so has part: feature:4007712-4008401:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2798685-2798758:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2858378-2858485:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2883843-2883988:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2886853-2887123:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2891021-2891153:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2891434-2891575:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3990261-3990324:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3990428-3990525:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3993727-3993787:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3998295-3998416:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4001690-4001764:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4002041-4002168:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4004037-4004202:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4006374-4006475:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4007712-4008401:1:exon

LOC123629050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAAAAVAAAAATATMATAAVSQQNPPKNGEATVNGEENGTHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSSGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHICRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSSPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC123629050
subclass of: SO_0000673
so part of: LOC123629050
location: join(2858428..2858485,2883843..2883988,2886853..2887123,2891021..2891153,2891434..2891575,3990261..3990324,3990428..3990525,3993727..3993787,3998295..3998416,4001690..4001764,4002041..4002168,4004037..4004202,4006374..4006475,4007712..4007738)
location: region:2858428-4007738:1
so has part: feature:2858428-2858485:1:exon
so has part: feature:2883843-2883988:1:exon
so has part: feature:2886853-2887123:1:exon
so has part: feature:2891021-2891153:1:exon
so has part: feature:2891434-2891575:1:exon
so has part: feature:3990261-3990324:1:exon
so has part: feature:3990428-3990525:1:exon
so has part: feature:3993727-3993787:1:exon
so has part: feature:3998295-3998416:1:exon
so has part: feature:4001690-4001764:1:exon
so has part: feature:4002041-4002168:1:exon
so has part: feature:4004037-4004202:1:exon
so has part: feature:4006374-4006475:1:exon
so has part: feature:4007712-4007738:1:exon

XP_045394938.1
type: Protein
SIO_000068: ncbiprotein

position:2858428:1
position: 2858428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4007738:1
position: 4007738
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2858428-2858485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883843-2883988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2886853-2887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891021-2891153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2891434-2891575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3990261-3990324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3990428-3990525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3993727-3993787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3998295-3998416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4001690-4001764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4002041-4002168:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4004037-4004202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4006374-4006475:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4007712-4007738:1:exon

LOC123629050
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629050
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAAAAVAAAAATATMATAAVSQQNPPKNGEATVNGEENGTHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSSGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHICRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSSPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC123629050
subclass of: SO_0000673
so part of: LOC123629050
location: join(2858428..2858485,2883843..2883988,2886853..2887123,2891021..2891153,2891434..2891575,3990261..3990324,3990428..3990525,3993727..3993787,3998295..3998416,4001690..4001764,4002041..4002168,4004037..4004202,4006374..4006475,4007712..4007738)
location: region:2858428-4007738:1
so has part: feature:2858428-2858485:1:exon
so has part: feature:2883843-2883988:1:exon
so has part: feature:2886853-2887123:1:exon
so has part: feature:2891021-2891153:1:exon
so has part: feature:2891434-2891575:1:exon
so has part: feature:3990261-3990324:1:exon
so has part: feature:3990428-3990525:1:exon
so has part: feature:3993727-3993787:1:exon
so has part: feature:3998295-3998416:1:exon
so has part: feature:4001690-4001764:1:exon
so has part: feature:4002041-4002168:1:exon
so has part: feature:4004037-4004202:1:exon
so has part: feature:4006374-4006475:1:exon
so has part: feature:4007712-4007738:1:exon

XP_045394939.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2858428-2858485:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2883843-2883988:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2886853-2887123:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2891021-2891153:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2891434-2891575:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3990261-3990324:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3990428-3990525:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3993727-3993787:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3998295-3998416:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4001690-4001764:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4002041-4002168:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4004037-4004202:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4006374-4006475:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4007712-4007738:1:exon

LOC123629099
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629099
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2895231..2936870
location: region:2895231-2936870:1
so has part: feature:2895231-2936870:1:exon
subclass of: SO_0000010

123629099
type: Gene
SIO_000068: ncbigene

position:2895231:1
position: 2895231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2936870:1
position: 2936870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2895231-2936870:1:exon

LOC123629099
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629099
product: haloacid dehalogenase-like hydrolase domain-containing protein 2
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
transcript id: XM_045539061.1
SIO_010081: LOC123629099
subclass of: SO_0000673
so part of: LOC123629099
location: join(2895231..2895248,2895506..2895684,2936038..2936243,2936381..2936870)
location: region:2895231-2936870:1
so has part: feature:2895231-2895248:1:exon
so has part: feature:2895506-2895684:1:exon
so has part: feature:2936038-2936243:1:exon
so has part: feature:2936381-2936870:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:2895231-2895248:1:exon

position:2895248:1
position: 2895248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2895506-2895684:1:exon

position:2895506:1
position: 2895506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2895684:1
position: 2895684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2936038-2936243:1:exon

position:2936038:1
position: 2936038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2936243:1
position: 2936243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2936381-2936870:1:exon

position:2936381:1
position: 2936381
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629099
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629099
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: haloacid dehalogenase-like hydrolase domain-containing protein 2
translation: MTRGLMGSHGPQGKRPHWFKIWSMSSLLSSAIRRPPHWRSHPPLGCRSHLGHLGLLGHWGHSRIVRLRDTSVMVRFVTNTTKEFKQDLLESLRKLGFDISEDEIVTSLTSARGLGEQKHVRPVLLVDDWALPDFKGIQTSDPNAVVIGLAPEHFHYQIVKQAFRLLLDGAPLIAIHEAEYYKRXDGLALGPGPLVTMLEYATDTKATVEGKPERTFFLEGLRGTGCEPEETVMVGDDCRANVGGALNVGMPGILEKTGKYRAAGKEKINPSPYLTGESFPHAVDHILQHLLSPTMCI
SIO_010081: LOC123629099
subclass of: SO_0000673
so part of: LOC123629099
location: join(2895231..2895248,2895506..2895684,2936038..2936243,2936381..2936870)
location: region:2895231-2936870:1
so has part: feature:2895231-2895248:1:exon
so has part: feature:2895506-2895684:1:exon
so has part: feature:2936038-2936243:1:exon
so has part: feature:2936381-2936870:1:exon

XP_045395017.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2895231-2895248:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2895506-2895684:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2936038-2936243:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2936381-2936870:1:exon

LOC123629053
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 2971271..3002003
location: region:2971271-3002003:1
so has part: feature:2971271-3002003:1:exon
subclass of: SO_0000010

123629053
type: Gene
SIO_000068: ncbigene

position:2971271:1
position: 2971271
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3002003:1
position: 3002003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971271-3002003:1:exon

LOC123629053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629053
product: 40S ribosomal protein S4, Y-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538985.1
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2971271..2971368,2971978..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,2995333..2995490)
location: region:2971271-2995490:1
so has part: feature:2971271-2971368:1:exon
so has part: feature:2971978-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:2995333-2995490:1:exon

position:2995490:1
position: 2995490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971271-2971368:1:exon

position:2971368:1
position: 2971368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2971978-2972055:1:exon

position:2971978:1
position: 2971978
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2972055:1
position: 2972055
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:2974678-2974858:1:exon

position:2974678:1
position: 2974678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2974858:1
position: 2974858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2975938-2976035:1:exon

position:2975938:1
position: 2975938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2976035:1
position: 2976035
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:2982475-2982646:1:exon

position:2982475:1
position: 2982475
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2982646:1
position: 2982646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:2993860-2994017:1:exon

position:2993860:1
position: 2993860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2994017:1
position: 2994017
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:2995333-2995490:1:exon

position:2995333:1
position: 2995333
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629053
product: 40S ribosomal protein S4, Y-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 228 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_045538987.1
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2971328..2971368,2971978..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,3001368..3002003)
location: region:2971328-3002003:1
so has part: feature:2971328-2971368:1:exon
so has part: feature:2971978-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:3001368-3002003:1:exon

position:2971328:1
position: 2971328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971328-2971368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971978-2972055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974678-2974858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975938-2976035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2982475-2982646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2993860-2994017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3001368-3002003:1:exon

position:3001368:1
position: 3001368
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4-like isoform X2
translation: MARGPKKHLKRVTAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTGDEVKKICMQRFIRIDGRVRTDITYPAGFMDVISIEKTDEHFRLVYDTKGRFAVHRITAEEAGYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIHLGTGKITDFIKFDTGNICMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGSSFATRLSNIFVIGKRLSSRLWSSAVSAHVKMRR
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2971366..2971368,2971978..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,3001368..3001427)
location: region:2971366-3001427:1
so has part: feature:2971366-2971368:1:exon
so has part: feature:2971978-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:3001368-3001427:1:exon

XP_045394943.1
type: Protein
SIO_000068: ncbiprotein

position:2971366:1
position: 2971366
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3001427:1
position: 3001427
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971366-2971368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971978-2972055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974678-2974858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975938-2976035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2982475-2982646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2993860-2994017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3001368-3001427:1:exon

LOC123629053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y-like isoform X1
translation: MARGPKKHLKRVTAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTGDEVKKICMQRFIRIDGRVRTDITYPAGFMDVISIEKTDEHFRLVYDTKGRFAVHRITAEEAGYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIHLGTGKITDFIKFDTGNICMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGSSFATRLSNIFVIGKGNKPWISLPRGKGIRLTVAEERDKQLTAKQSSG
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2971366..2971368,2971978..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,2995333..2995434)
location: region:2971366-2995434:1
so has part: feature:2971366-2971368:1:exon
so has part: feature:2971978-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:2995333-2995434:1:exon

XP_045394941.1
type: Protein
SIO_000068: ncbiprotein

position:2995434:1
position: 2995434
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971366-2971368:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2971978-2972055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974678-2974858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975938-2976035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2982475-2982646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2993860-2994017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2995333-2995434:1:exon

LOC123629053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629053
product: 40S ribosomal protein S4, Y-like, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538988.1
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2971572..2971595,2971978..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,2995333..2995490)
location: region:2971572-2995490:1
so has part: feature:2971572-2971595:1:exon
so has part: feature:2971978-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:2995333-2995490:1:exon

position:2971572:1
position: 2971572
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971572-2971595:1:exon

position:2971595:1
position: 2971595
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2971978-2972055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974678-2974858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975938-2976035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2982475-2982646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2993860-2994017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2995333-2995490:1:exon

LOC123629053
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629053
product: 40S ribosomal protein S4, Y-like, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538989.1
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2971742..2971763,2971978..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,2995333..2995490)
location: region:2971742-2995490:1
so has part: feature:2971742-2971763:1:exon
so has part: feature:2971978-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:2995333-2995490:1:exon

position:2971742:1
position: 2971742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2971742-2971763:1:exon

position:2971763:1
position: 2971763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:2971978-2972055:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2974678-2974858:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2975938-2976035:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2982475-2982646:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2993860-2994017:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:2995333-2995490:1:exon

LOC123629053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y-like isoform X3
translation: MLDKLTGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTGDEVKKICMQRFIRIDGRVRTDITYPAGFMDVISIEKTDEHFRLVYDTKGRFAVHRITAEEAGYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIHLGTGKITDFIKFDTGNICMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGSSFATRLSNIFVIGKGNKPWISLPRGKGIRLTVAEERDKQLTAKQSSG
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2972029..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,2995333..2995434)
location: region:2972029-2995434:1
so has part: feature:2972029-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:2995333-2995434:1:exon

XP_045394944.1
type: Protein
SIO_000068: ncbiprotein

position:2972029:1
position: 2972029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:2972029-2972055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2974678-2974858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2975938-2976035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2982475-2982646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2993860-2994017:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2995333-2995434:1:exon

LOC123629053
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629053
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y-like isoform X3
translation: MLDKLTGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTGDEVKKICMQRFIRIDGRVRTDITYPAGFMDVISIEKTDEHFRLVYDTKGRFAVHRITAEEAGYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIHLGTGKITDFIKFDTGNICMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGSSFATRLSNIFVIGKGNKPWISLPRGKGIRLTVAEERDKQLTAKQSSG
SIO_010081: LOC123629053
subclass of: SO_0000673
so part of: LOC123629053
location: join(2972029..2972055,2974678..2974858,2975938..2976035,2982475..2982646,2993860..2994017,2995333..2995434)
location: region:2972029-2995434:1
so has part: feature:2972029-2972055:1:exon
so has part: feature:2974678-2974858:1:exon
so has part: feature:2975938-2976035:1:exon
so has part: feature:2982475-2982646:1:exon
so has part: feature:2993860-2994017:1:exon
so has part: feature:2995333-2995434:1:exon

XP_045394945.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:2972029-2972055:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:2974678-2974858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:2975938-2976035:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2982475-2982646:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:2993860-2994017:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:2995333-2995434:1:exon

LOC123629056
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3037915..3068357
location: region:3037915-3068357:1
so has part: feature:3037915-3068357:1:exon
subclass of: SO_0000010

123629056
type: Gene
SIO_000068: ncbigene

position:3037915:1
position: 3037915
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3068357:1
position: 3068357
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3037915-3068357:1:exon

LOC123629056
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9447
gene: LOC123629056
product: ubiquitin-protein ligase E3C-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731889.1
SIO_010081: LOC123629056
so part of: LOC123629056
location: join(3037915..3038340,3047360..3047412,3050329..3050403,3050879..3051011,3053132..3053247,3059487..3060991)
location: region:3037915-3060991:1
so has part: feature:3037915-3038340:1:exon
so has part: feature:3047360-3047412:1:exon
so has part: feature:3050329-3050403:1:exon
so has part: feature:3050879-3051011:1:exon
so has part: feature:3053132-3053247:1:exon
so has part: feature:3059487-3060991:1:exon

position:3060991:1
position: 3060991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3037915-3038340:1:exon

position:3038340:1
position: 3038340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3047360-3047412:1:exon

position:3047360:1
position: 3047360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3047412:1
position: 3047412
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3050329-3050403:1:exon

position:3050329:1
position: 3050329
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3050403:1
position: 3050403
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3050879-3051011:1:exon

position:3050879:1
position: 3050879
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3051011:1
position: 3051011
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3053132-3053247:1:exon

position:3053132:1
position: 3053132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3053247:1
position: 3053247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3059487-3060991:1:exon

position:3059487:1
position: 3059487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629056
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9447
gene: LOC123629056
product: ubiquitin-protein ligase E3C-like, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731890.1
SIO_010081: LOC123629056
so part of: LOC123629056
location: join(3037917..3038340,3047360..3047412,3050329..3050403,3050987..3051011,3053132..3053247,3059487..3060991)
location: region:3037917-3060991:1
so has part: feature:3037917-3038340:1:exon
so has part: feature:3047360-3047412:1:exon
so has part: feature:3050329-3050403:1:exon
so has part: feature:3050987-3051011:1:exon
so has part: feature:3053132-3053247:1:exon
so has part: feature:3059487-3060991:1:exon

position:3037917:1
position: 3037917
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3037917-3038340:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3047360-3047412:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3050329-3050403:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3050987-3051011:1:exon

position:3050987:1
position: 3050987
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3053132-3053247:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3059487-3060991:1:exon

LOC123629056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629056
product: ubiquitin-protein ligase E3C-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538995.1
SIO_010081: LOC123629056
subclass of: SO_0000673
so part of: LOC123629056
location: join(3050483..3051011,3053132..3053247,3059487..3059644,3068234..3068357)
location: region:3050483-3068357:1
so has part: feature:3050483-3051011:1:exon
so has part: feature:3053132-3053247:1:exon
so has part: feature:3059487-3059644:1:exon
so has part: feature:3068234-3068357:1:exon

position:3050483:1
position: 3050483
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3050483-3051011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053132-3053247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3059487-3059644:1:exon

position:3059644:1
position: 3059644
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3068234-3068357:1:exon

position:3068234:1
position: 3068234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-protein ligase E3C-like isoform X1
translation: MYLNNTFLFCFRYSVQRSAFDRCAGLSQSGGTFPLANGSNLTLLVRQLLFFYRQNEDSKRLIWLYQNLIKHSALFVKQLDGSERLTCLFQIKRLMSLCCRLLQNCNDDSLNVALPMRMLEVFSSENTYMPVLQDANYVVSVIAQTLHYVIQNGEPTEVWKKVSTITGKEHGGGGGQG
SIO_010081: LOC123629056
subclass of: SO_0000673
so part of: LOC123629056
location: join(3050829..3051011,3053132..3053247,3059487..3059644,3068234..3068310)
location: region:3050829-3068310:1
so has part: feature:3050829-3051011:1:exon
so has part: feature:3053132-3053247:1:exon
so has part: feature:3059487-3059644:1:exon
so has part: feature:3068234-3068310:1:exon

XP_045394951.1
type: Protein
SIO_000068: ncbiprotein

position:3050829:1
position: 3050829
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3068310:1
position: 3068310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3050829-3051011:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3053132-3053247:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3059487-3059644:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3068234-3068310:1:exon

LOC123629056
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629056
product: ubiquitin-protein ligase E3C-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538996.1
SIO_010081: LOC123629056
subclass of: SO_0000673
so part of: LOC123629056
location: join(3052909..3053247,3059487..3059644,3068234..3068357)
location: region:3052909-3068357:1
so has part: feature:3052909-3053247:1:exon
so has part: feature:3059487-3059644:1:exon
so has part: feature:3068234-3068357:1:exon

position:3052909:1
position: 3052909
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3052909-3053247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3059487-3059644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3068234-3068357:1:exon

LOC123629056
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629056
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-protein ligase E3C-like isoform X2
translation: MSLCCRLLQNCNDDSLNVALPMRMLEVFSSENTYMPVLQDANYVVSVIAQTLHYVIQNGEPTEVWKKVSTITGKEHGGGGGQG
SIO_010081: LOC123629056
subclass of: SO_0000673
so part of: LOC123629056
location: join(3053231..3053247,3059487..3059644,3068234..3068310)
location: region:3053231-3068310:1
so has part: feature:3053231-3053247:1:exon
so has part: feature:3059487-3059644:1:exon
so has part: feature:3068234-3068310:1:exon

XP_045394952.1
type: Protein
SIO_000068: ncbiprotein

position:3053231:1
position: 3053231
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3053231-3053247:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3059487-3059644:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3068234-3068310:1:exon

LOC123629023
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629023
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3184679..3197045
location: region:3184679-3197045:1
so has part: feature:3184679-3197045:1:exon

123629023
type: Gene
SIO_000068: ncbigene

position:3184679:1
position: 3184679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3197045:1
position: 3197045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3184679-3197045:1:exon

LOC123629023
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 9447
gene: LOC123629023
product: haloacid dehalogenase-like hydrolase domain-containing protein 2
experiment: COORDINATES: polyA evidence [ECO:0006239]
pseudo: true
transcript id: XR_006731887.1
SIO_010081: LOC123629023
so part of: LOC123629023
location: join(3184679..3184683,3195157..3195362,3195500..3197045)
location: region:3184679-3197045:1
so has part: feature:3184679-3184683:1:exon
so has part: feature:3195157-3195362:1:exon
so has part: feature:3195500-3197045:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3184679-3184683:1:exon

position:3184683:1
position: 3184683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3195157-3195362:1:exon

position:3195157:1
position: 3195157
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3195362:1
position: 3195362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3195500-3197045:1:exon

position:3195500:1
position: 3195500
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629070
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3230433..3235319
location: region:3230433-3235319:1
so has part: feature:3230433-3235319:1:exon
subclass of: SO_0000010

123629070
type: Gene
SIO_000068: ncbigene

position:3230433:1
position: 3230433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235319:1
position: 3235319
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3230433-3235319:1:exon

LOC123629070
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629070
product: 40S ribosomal protein S4-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 43 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_045539020.1
SIO_010081: LOC123629070
subclass of: SO_0000673
so part of: LOC123629070
location: join(3230433..3230480,3231090..3231167,3233790..3233970,3235050..3235319)
location: region:3230433-3235319:1
so has part: feature:3230433-3230480:1:exon
so has part: feature:3231090-3231167:1:exon
so has part: feature:3233790-3233970:1:exon
so has part: feature:3235050-3235319:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3230433-3230480:1:exon

position:3230480:1
position: 3230480
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3231090-3231167:1:exon

position:3231090:1
position: 3231090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3231167:1
position: 3231167
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3233790-3233970:1:exon

position:3233790:1
position: 3233790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3233970:1
position: 3233970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3235050-3235319:1:exon

position:3235050:1
position: 3235050
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629070
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629070
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4-like
translation: MARGPKKHLKRVTAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTGDEVKKICMQRFIRIDGRVRTDITYPAGFMDVISIEKTDEHFRLVYDTKGRFAVHRITAEEAGVSWARQVKWTW
SIO_010081: LOC123629070
subclass of: SO_0000673
so part of: LOC123629070
location: join(3230478..3230480,3231090..3231167,3233790..3233970,3235050..3235183)
location: region:3230478-3235183:1
so has part: feature:3230478-3230480:1:exon
so has part: feature:3231090-3231167:1:exon
so has part: feature:3233790-3233970:1:exon
so has part: feature:3235050-3235183:1:exon

XP_045394976.1
type: Protein
SIO_000068: ncbiprotein

position:3230478:1
position: 3230478
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3235183:1
position: 3235183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3230478-3230480:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3231090-3231167:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3233790-3233970:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3235050-3235183:1:exon

LOC123629024
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629024
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: 3344991..3356364
location: region:3344991-3356364:1
so has part: feature:3344991-3356364:1:exon

123629024
type: Gene
SIO_000068: ncbigene

position:3344991:1
position: 3344991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3356364:1
position: 3356364
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3344991-3356364:1:exon

LOC123629024
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629024
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC123629024
subclass of: SO_0000673
so part of: LOC123629024
location: 3344991..3344995
location: region:3344991-3344995:1
so has part: feature:3344991-3344995:1:exon

position:3344995:1
position: 3344995
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3344991-3344995:1:exon

LOC123629024
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629024
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC123629024
subclass of: SO_0000673
so part of: LOC123629024
location: 3355532..3355737
location: region:3355532-3355737:1
so has part: feature:3355532-3355737:1:exon

position:3355532:1
position: 3355532
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3355737:1
position: 3355737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355532-3355737:1:exon

LOC123629024
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629024
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins
pseudo: true
SIO_010081: LOC123629024
subclass of: SO_0000673
so part of: LOC123629024
location: 3355875..3356364
location: region:3355875-3356364:1
so has part: feature:3355875-3356364:1:exon

position:3355875:1
position: 3355875
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3355875-3356364:1:exon

LOC123629054
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3390764..3421401
location: region:3390764-3421401:1
so has part: feature:3390764-3421401:1:exon
subclass of: SO_0000010

123629054
type: Gene
SIO_000068: ncbigene

position:3390764:1
position: 3390764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3421401:1
position: 3421401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3390764-3421401:1:exon

LOC123629054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629054
product: 40S ribosomal protein S4, Y-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538990.1
SIO_010081: LOC123629054
subclass of: SO_0000673
so part of: LOC123629054
location: join(3390764..3390861,3391471..3391548,3394171..3394351,3395431..3395528,3401968..3402139,3413345..3413502,3414818..3414975)
location: region:3390764-3414975:1
so has part: feature:3390764-3390861:1:exon
so has part: feature:3391471-3391548:1:exon
so has part: feature:3394171-3394351:1:exon
so has part: feature:3395431-3395528:1:exon
so has part: feature:3401968-3402139:1:exon
so has part: feature:3413345-3413502:1:exon
so has part: feature:3414818-3414975:1:exon

position:3414975:1
position: 3414975
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3390764-3390861:1:exon

position:3390861:1
position: 3390861
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3391471-3391548:1:exon

position:3391471:1
position: 3391471
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3391548:1
position: 3391548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3394171-3394351:1:exon

position:3394171:1
position: 3394171
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3394351:1
position: 3394351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3395431-3395528:1:exon

position:3395431:1
position: 3395431
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3395528:1
position: 3395528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3401968-3402139:1:exon

position:3401968:1
position: 3401968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3402139:1
position: 3402139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3413345-3413502:1:exon

position:3413345:1
position: 3413345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3413502:1
position: 3413502
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3414818-3414975:1:exon

position:3414818:1
position: 3414818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629054
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629054
product: 40S ribosomal protein S4, Y-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 229 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
transcript id: XM_045538991.1
SIO_010081: LOC123629054
subclass of: SO_0000673
so part of: LOC123629054
location: join(3390814..3390861,3391471..3391548,3394171..3394351,3395431..3395528,3401968..3402139,3413345..3413502,3420766..3421401)
location: region:3390814-3421401:1
so has part: feature:3390814-3390861:1:exon
so has part: feature:3391471-3391548:1:exon
so has part: feature:3394171-3394351:1:exon
so has part: feature:3395431-3395528:1:exon
so has part: feature:3401968-3402139:1:exon
so has part: feature:3413345-3413502:1:exon
so has part: feature:3420766-3421401:1:exon

position:3390814:1
position: 3390814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3390814-3390861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3391471-3391548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3394171-3394351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3395431-3395528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3401968-3402139:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3413345-3413502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3420766-3421401:1:exon

position:3420766:1
position: 3420766
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4-like isoform X2
translation: MARGPKKHLKRVTAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTGDEVKKICMQRFIRIDGRVRTDITYPAGFMDVISIEKTDEHFRLVYDTKGRFAVHRITAEEAGYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIHLGTGKITDFIKFDTGNICMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGSSFATRLSNIFVIGKRLSSRLWSSAVSAHVKMRR
SIO_010081: LOC123629054
subclass of: SO_0000673
so part of: LOC123629054
location: join(3390859..3390861,3391471..3391548,3394171..3394351,3395431..3395528,3401968..3402139,3413345..3413502,3420766..3420825)
location: region:3390859-3420825:1
so has part: feature:3390859-3390861:1:exon
so has part: feature:3391471-3391548:1:exon
so has part: feature:3394171-3394351:1:exon
so has part: feature:3395431-3395528:1:exon
so has part: feature:3401968-3402139:1:exon
so has part: feature:3413345-3413502:1:exon
so has part: feature:3420766-3420825:1:exon

XP_045394947.1
type: Protein
SIO_000068: ncbiprotein

position:3390859:1
position: 3390859
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3420825:1
position: 3420825
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3390859-3390861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3391471-3391548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3394171-3394351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3395431-3395528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3401968-3402139:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3413345-3413502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3420766-3420825:1:exon

LOC123629054
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629054
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 40S ribosomal protein S4, Y-like isoform X1
translation: MARGPKKHLKRVTAPRHWMLDKLTGVFAPRPSTGPHKLRECLPLVIFLRNRLKYALTGDEVKKICMQRFIRIDGRVRTDITYPAGFMDVISIEKTDEHFRLVYDTKGRFAVHRITAEEAGYKLCKVRKITVGTKGIPHLVTHDARTIRYPDPVIKVNDTVQIHLGTGKITDFIKFDTGNICMVIGGANLGRVGVITNRERHPGSFDVVHVKDASGSSFATRLSNIFVIGKGNKPWISLPRGKGIRLTVAEERDKQLTAKQSSG
SIO_010081: LOC123629054
subclass of: SO_0000673
so part of: LOC123629054
location: join(3390859..3390861,3391471..3391548,3394171..3394351,3395431..3395528,3401968..3402139,3413345..3413502,3414818..3414919)
location: region:3390859-3414919:1
so has part: feature:3390859-3390861:1:exon
so has part: feature:3391471-3391548:1:exon
so has part: feature:3394171-3394351:1:exon
so has part: feature:3395431-3395528:1:exon
so has part: feature:3401968-3402139:1:exon
so has part: feature:3413345-3413502:1:exon
so has part: feature:3414818-3414919:1:exon

XP_045394946.1
type: Protein
SIO_000068: ncbiprotein

position:3414919:1
position: 3414919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3390859-3390861:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3391471-3391548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3394171-3394351:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3395431-3395528:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3401968-3402139:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3413345-3413502:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3414818-3414919:1:exon

LOC123629071
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629071
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3457303..3469865
location: region:3457303-3469865:1
so has part: feature:3457303-3469865:1:exon
subclass of: SO_0000011

123629071
type: Gene
SIO_000068: ncbigene

position:3457303:1
position: 3457303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3469865:1
position: 3469865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3457303-3469865:1:exon

LOC123629071
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629071
product: uncharacterized LOC123629071
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731891.1
SIO_010081: LOC123629071
subclass of: SO_0000673
so part of: LOC123629071
location: join(3457303..3457736,3466759..3466811,3469728..3469865)
location: region:3457303-3469865:1
so has part: feature:3457303-3457736:1:exon
so has part: feature:3466759-3466811:1:exon
so has part: feature:3469728-3469865:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3457303-3457736:1:exon

position:3457736:1
position: 3457736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3466759-3466811:1:exon

position:3466759:1
position: 3466759
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3466811:1
position: 3466811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3469728-3469865:1:exon

position:3469728:1
position: 3469728
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629055
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3469891..3484880
location: region:3469891-3484880:1
so has part: feature:3469891-3484880:1:exon
subclass of: SO_0000010

123629055
type: Gene
SIO_000068: ncbigene

position:3469891:1
position: 3469891
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3484880:1
position: 3484880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3469891-3484880:1:exon

LOC123629055
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629055
product: ubiquitin-protein ligase E3C-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045538992.1
SIO_010081: LOC123629055
subclass of: SO_0000673
so part of: LOC123629055
location: join(3469891..3470410,3472531..3472646,3478886..3479043,3483324..3484880)
location: region:3469891-3484880:1
so has part: feature:3469891-3470410:1:exon
so has part: feature:3472531-3472646:1:exon
so has part: feature:3478886-3479043:1:exon
so has part: feature:3483324-3484880:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3469891-3470410:1:exon

position:3470410:1
position: 3470410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3472531-3472646:1:exon

position:3472531:1
position: 3472531
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3472646:1
position: 3472646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3478886-3479043:1:exon

position:3478886:1
position: 3478886
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3479043:1
position: 3479043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3483324-3484880:1:exon

position:3483324:1
position: 3483324
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629055
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629055
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ubiquitin-protein ligase E3C-like
translation: MYLNNTFLFCFRYSVQRSAFDRCAGLSQSGGTFPLANGSNLTLLVRQLLFFYRQNEDSKRLIWLYQNLIKHSALFVKQLDGSERLTCLFQIKRLMSLCCRLLQNCNDDSLNVALPMRMLEVFSSENTYMPVLQDANYVVSVIAQTLHYVIQNGNRSSQPSRGSFWRRLSQIRSFISSSRRWQMHRPSSLTSPSCGHCCWQSGGAQRRAVEHRGFSILF
SIO_010081: LOC123629055
subclass of: SO_0000673
so part of: LOC123629055
location: join(3470228..3470410,3472531..3472646,3478886..3479043,3483324..3483523)
location: region:3470228-3483523:1
so has part: feature:3470228-3470410:1:exon
so has part: feature:3472531-3472646:1:exon
so has part: feature:3478886-3479043:1:exon
so has part: feature:3483324-3483523:1:exon

XP_045394948.1
type: Protein
SIO_000068: ncbiprotein

position:3470228:1
position: 3470228
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3483523:1
position: 3483523
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3470228-3470410:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3472531-3472646:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3478886-3479043:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3483324-3483523:1:exon

LOC123629078
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629078
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(3485028..3494741)
location: region:3485028-3494741:-1
so has part: feature:3485028-3494741:-1:exon
subclass of: SO_0000011

123629078
type: Gene
SIO_000068: ncbigene

position:3485028:-1
position: 3485028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:3494741:-1
position: 3494741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3485028-3494741:-1:exon

LOC123629078
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629078
product: uncharacterized LOC123629078
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XR_006731898.1
SIO_010081: LOC123629078
subclass of: SO_0000673
so part of: LOC123629078
location: complement(join(3485028..3485151,3493741..3494741))
location: region:3485028-3494741:-1
so has part: feature:3493741-3494741:-1:exon
so has part: feature:3485028-3485151:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3493741-3494741:-1:exon

position:3493741:-1
position: 3493741
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3485028-3485151:-1:exon

position:3485151:-1
position: 3485151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC123629025
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629025
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3537025..3555910
location: region:3537025-3555910:1
so has part: feature:3537025-3555910:1:exon
subclass of: SO_0000010

123629025
type: Gene
SIO_000068: ncbigene

position:3537025:1
position: 3537025
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3555910:1
position: 3555910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3537025-3555910:1:exon

LOC123629025
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629025
product: kallikrein-15-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 13 Proteins
transcript id: XM_045538963.1
SIO_010081: LOC123629025
subclass of: SO_0000673
so part of: LOC123629025
location: join(3537025..3537112,3537230..3537296,3537379..3537438,3548764..3548961,3552217..3552507,3552717..3552736,3553962..3554115,3554564..3554847,3554970..3555112,3555758..3555910)
location: region:3537025-3555910:1
so has part: feature:3537025-3537112:1:exon
so has part: feature:3537230-3537296:1:exon
so has part: feature:3537379-3537438:1:exon
so has part: feature:3548764-3548961:1:exon
so has part: feature:3552217-3552507:1:exon
so has part: feature:3552717-3552736:1:exon
so has part: feature:3553962-3554115:1:exon
so has part: feature:3554564-3554847:1:exon
so has part: feature:3554970-3555112:1:exon
so has part: feature:3555758-3555910:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3537025-3537112:1:exon

position:3537112:1
position: 3537112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3537230-3537296:1:exon

position:3537230:1
position: 3537230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3537296:1
position: 3537296
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3537379-3537438:1:exon

position:3537379:1
position: 3537379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3537438:1
position: 3537438
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3548764-3548961:1:exon

position:3548764:1
position: 3548764
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3548961:1
position: 3548961
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3552217-3552507:1:exon

position:3552217:1
position: 3552217
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3552507:1
position: 3552507
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3552717-3552736:1:exon

position:3552717:1
position: 3552717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3552736:1
position: 3552736
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3553962-3554115:1:exon

position:3553962:1
position: 3553962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554115:1
position: 3554115
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3554564-3554847:1:exon

position:3554564:1
position: 3554564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3554847:1
position: 3554847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:3554970-3555112:1:exon

position:3554970:1
position: 3554970
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3555112:1
position: 3555112
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:3555758-3555910:1:exon

position:3555758:1
position: 3555758
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629025
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629025
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:3554637..3554639,aa:OTHER)
product: LOW QUALITY PROTEIN: kallikrein-15-like
translation: MVPRGTVDPAEMGDLEDLQWGELGGEHVGAESWSLLYNVPFPHLFLPADIYSPYLTQRPPKDLLQSEFHIKKSQFLKTASLNPATLLLDDEPSEPLYDCLKLFESLINLRADLTDCPWPDPDEELYTDGSSYVSEGVSLPSGSLCALSSLPPACPLHPAGASTLLQLGLARCSLGAQLFSPCPPPFSTRQPQPSFAKPLIHHICIPLASPAPLAQFLTMVDRPRAFDLTMQILPQSPYVKPKAQEGDKLLKGEECAPHSQPWQVALYEHELFNCSASLISPHWLLSAAHCQTRSMTVCPGEHNLCKHDGPEQLWAVSXVIPHPGYKACSHHHDVMLLRLARPARRTRQVCPVTLPTRCPSPGEACVVSGWGLVSKNEPGTIGSPESQVSLPDTLHCANISIISDTSCNKDYPVGHLMNSMVCVGAEGGGTEVSYEGDSGGPLVCRGVLQGIVSWGDIPCDTTTKPGVYTKVCHYLEWIREIMKRT
SIO_010081: LOC123629025
subclass of: SO_0000673
so part of: LOC123629025
location: join(3537025..3537112,3537230..3537296,3537379..3537438,3548764..3548961,3552217..3552507,3552717..3552736,3553962..3554115,3554564..3554847,3554970..3555112,3555758..3555910)
location: region:3537025-3555910:1
so has part: feature:3537025-3537112:1:exon
so has part: feature:3537230-3537296:1:exon
so has part: feature:3537379-3537438:1:exon
so has part: feature:3548764-3548961:1:exon
so has part: feature:3552217-3552507:1:exon
so has part: feature:3552717-3552736:1:exon
so has part: feature:3553962-3554115:1:exon
so has part: feature:3554564-3554847:1:exon
so has part: feature:3554970-3555112:1:exon
so has part: feature:3555758-3555910:1:exon

XP_045394919.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3537025-3537112:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3537230-3537296:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3537379-3537438:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3548764-3548961:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3552217-3552507:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3552717-3552736:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3553962-3554115:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3554564-3554847:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:3554970-3555112:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:3555758-3555910:1:exon

LOC123629144
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629144
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
so part of: sequence
location: 3611745..3611835
location: region:3611745-3611835:1
so has part: feature:3611745-3611835:1:exon

123629144
type: Gene
SIO_000068: ncbigene

position:3611745:1
position: 3611745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3611835:1
position: 3611835
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3611745-3611835:1:exon

LOC123629144
type: Exon
subclass of: SO_0000147
RO_0002162: 9447
gene: LOC123629144
inference: COORDINATES: nucleotide motif:Rfam:12.0:RF01210
inference: COORDINATES: profile:INFERNAL:1.1.1
note: Derived by automated computational analysis using gene prediction method: cmsearch.
pseudo: true
SIO_010081: LOC123629144
subclass of: SO_0000673
so part of: LOC123629144
location: 3611745..3611835
location: region:3611745-3611835:1
so has part: feature:3611745-3611835:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3611745-3611835:1:exon

LOC123629072
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629072
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3634549..3636134
location: region:3634549-3636134:1
so has part: feature:3634549-3636134:1:exon
subclass of: SO_0000011

123629072
type: Gene
SIO_000068: ncbigene

position:3634549:1
position: 3634549
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3636134:1
position: 3636134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3634549-3636134:1:exon

LOC123629072
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629072
product: uncharacterized LOC123629072
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731892.1
SIO_010081: LOC123629072
subclass of: SO_0000673
so part of: LOC123629072
location: join(3634549..3634638,3635392..3635520,3636059..3636134)
location: region:3634549-3636134:1
so has part: feature:3634549-3634638:1:exon
so has part: feature:3635392-3635520:1:exon
so has part: feature:3636059-3636134:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3634549-3634638:1:exon

position:3634638:1
position: 3634638
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3635392-3635520:1:exon

position:3635392:1
position: 3635392
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3635520:1
position: 3635520
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3636059-3636134:1:exon

position:3636059:1
position: 3636059
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629059
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3641249..3643216
location: region:3641249-3643216:1
so has part: feature:3641249-3643216:1:exon
subclass of: SO_0000010

123629059
type: Gene
SIO_000068: ncbigene

position:3641249:1
position: 3641249
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3643216:1
position: 3643216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3641249-3643216:1:exon

LOC123629059
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629059
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539000.1
SIO_010081: LOC123629059
subclass of: SO_0000673
so part of: LOC123629059
location: join(3641249..3641606,3641765..3641876,3641988..3642133,3642238..3642323,3643121..3643216)
location: region:3641249-3643216:1
so has part: feature:3641249-3641606:1:exon
so has part: feature:3641765-3641876:1:exon
so has part: feature:3641988-3642133:1:exon
so has part: feature:3642238-3642323:1:exon
so has part: feature:3643121-3643216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3641249-3641606:1:exon

position:3641606:1
position: 3641606
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3641765-3641876:1:exon

position:3641765:1
position: 3641765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3641876:1
position: 3641876
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3641988-3642133:1:exon

position:3641988:1
position: 3641988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3642133:1
position: 3642133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3642238-3642323:1:exon

position:3642238:1
position: 3642238
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3642323:1
position: 3642323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3643121-3643216:1:exon

position:3643121:1
position: 3643121
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629059
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629059
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539002.1
SIO_010081: LOC123629059
subclass of: SO_0000673
so part of: LOC123629059
location: join(3641249..3641606,3641765..3641876,3641988..3642073,3642238..3642323,3643121..3643216)
location: region:3641249-3643216:1
so has part: feature:3641249-3641606:1:exon
so has part: feature:3641765-3641876:1:exon
so has part: feature:3641988-3642073:1:exon
so has part: feature:3642238-3642323:1:exon
so has part: feature:3643121-3643216:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3641249-3641606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3641765-3641876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3641988-3642073:1:exon

position:3642073:1
position: 3642073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3642238-3642323:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3643121-3643216:1:exon

LOC123629059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629059
subclass of: SO_0000673
so part of: LOC123629059
location: join(3641457..3641606,3641765..3641876,3641988..3642133,3642238..3642303)
location: region:3641457-3642303:1
so has part: feature:3641457-3641606:1:exon
so has part: feature:3641765-3641876:1:exon
so has part: feature:3641988-3642133:1:exon
so has part: feature:3642238-3642303:1:exon

XP_045394956.1
type: Protein
SIO_000068: ncbiprotein

position:3641457:1
position: 3641457
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3642303:1
position: 3642303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3641457-3641606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3641765-3641876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3641988-3642133:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3642238-3642303:1:exon

LOC123629059
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629059
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629059
subclass of: SO_0000673
so part of: LOC123629059
location: join(3641457..3641606,3641765..3641876,3641988..3642073,3642238..3642303)
location: region:3641457-3642303:1
so has part: feature:3641457-3641606:1:exon
so has part: feature:3641765-3641876:1:exon
so has part: feature:3641988-3642073:1:exon
so has part: feature:3642238-3642303:1:exon

XP_045394958.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3641457-3641606:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3641765-3641876:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3641988-3642073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3642238-3642303:1:exon

LOC123629077
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629077
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3649727..3650132
location: region:3649727-3650132:1
so has part: feature:3649727-3650132:1:exon
subclass of: SO_0000011

123629077
type: Gene
SIO_000068: ncbigene

position:3649727:1
position: 3649727
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3650132:1
position: 3650132
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3649727-3650132:1:exon

LOC123629077
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629077
product: uncharacterized LOC123629077
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731897.1
SIO_010081: LOC123629077
subclass of: SO_0000673
so part of: LOC123629077
location: join(3649727..3649742,3649836..3649981,3650086..3650132)
location: region:3649727-3650132:1
so has part: feature:3649727-3649742:1:exon
so has part: feature:3649836-3649981:1:exon
so has part: feature:3650086-3650132:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3649727-3649742:1:exon

position:3649742:1
position: 3649742
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3649836-3649981:1:exon

position:3649836:1
position: 3649836
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3649981:1
position: 3649981
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3650086-3650132:1:exon

position:3650086:1
position: 3650086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629026
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3662080..3673396
location: region:3662080-3673396:1
so has part: feature:3662080-3673396:1:exon
subclass of: SO_0000010

123629026
type: Gene
SIO_000068: ncbigene

position:3662080:1
position: 3662080
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3673396:1
position: 3673396
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3662080-3673396:1:exon

LOC123629026
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629026
product: testis-specific Y-encoded protein 3-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 13% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045538964.1
SIO_010081: LOC123629026
subclass of: SO_0000673
so part of: LOC123629026
location: join(3662080..3662274,3662362..3663081,3664032..3664109,3672137..3672248,3672342..3672487,3672592..3672671,3673375..3673396)
location: region:3662080-3673396:1
so has part: feature:3662080-3662274:1:exon
so has part: feature:3662362-3663081:1:exon
so has part: feature:3664032-3664109:1:exon
so has part: feature:3672137-3672248:1:exon
so has part: feature:3672342-3672487:1:exon
so has part: feature:3672592-3672671:1:exon
so has part: feature:3673375-3673396:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3662080-3662274:1:exon

position:3662274:1
position: 3662274
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3662362-3663081:1:exon

position:3662362:1
position: 3662362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3663081:1
position: 3663081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3664032-3664109:1:exon

position:3664032:1
position: 3664032
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3664109:1
position: 3664109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3672137-3672248:1:exon

position:3672137:1
position: 3672137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672248:1
position: 3672248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3672342-3672487:1:exon

position:3672342:1
position: 3672342
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672487:1
position: 3672487
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3672592-3672671:1:exon

position:3672592:1
position: 3672592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3672671:1
position: 3672671
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3673375-3673396:1:exon

position:3673375:1
position: 3673375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629026
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629026
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 3-like
translation: MPAARCSGMLGLRGPGRMLSRQPQGHSFGPKARRALRDGSQAGGGAGPASLKASILPPIGGSERQAREGAPARAGPCALQASLRPSVGLQPLGSASPLWDLPACPSVAADANQHQGHMAGETGPGASEPPREAWHGPGLGRALQEAEAQGPPGEPAPGACGARAVGWAVQLSVCGTTEGGVVLSVGGLPECVTLAEPTGEEEVLVVEDILEAVEVVAEEEEDDNDDDKEDNEDEDSSQAQAGRCVSASSSPLEALELLELELSTANAADSKVFARLKLKLRQRQKAYLERRRAIIQAIPGFWARAIVYHPQLSAVITEQDKDVLSYMINLEVEEIKHPKSCYRILLFFGNKTYFRKKVVTKEYLVNITEFRAPHSAPVEWYQDYEHEAHSHAHQNSSLNFFNWFSDHNFTDSYTIAELITEDLCLTPLCYYTRMKAPAEETEDSYSSCKR
SIO_010081: LOC123629026
subclass of: SO_0000673
so part of: LOC123629026
location: join(3662080..3662274,3662362..3663081,3664032..3664109,3672137..3672248,3672342..3672487,3672592..3672671,3673375..3673396)
location: region:3662080-3673396:1
so has part: feature:3662080-3662274:1:exon
so has part: feature:3662362-3663081:1:exon
so has part: feature:3664032-3664109:1:exon
so has part: feature:3672137-3672248:1:exon
so has part: feature:3672342-3672487:1:exon
so has part: feature:3672592-3672671:1:exon
so has part: feature:3673375-3673396:1:exon

XP_045394920.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3662080-3662274:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3662362-3663081:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3664032-3664109:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3672137-3672248:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3672342-3672487:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3672592-3672671:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3673375-3673396:1:exon

LOC123629061
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3686257..3688224
location: region:3686257-3688224:1
so has part: feature:3686257-3688224:1:exon
subclass of: SO_0000010

123629061
type: Gene
SIO_000068: ncbigene

position:3686257:1
position: 3686257
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3688224:1
position: 3688224
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3686257-3688224:1:exon

LOC123629061
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629061
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539005.1
SIO_010081: LOC123629061
subclass of: SO_0000673
so part of: LOC123629061
location: join(3686257..3686614,3686773..3686884,3686996..3687141,3687246..3687331,3688129..3688224)
location: region:3686257-3688224:1
so has part: feature:3686257-3686614:1:exon
so has part: feature:3686773-3686884:1:exon
so has part: feature:3686996-3687141:1:exon
so has part: feature:3687246-3687331:1:exon
so has part: feature:3688129-3688224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3686257-3686614:1:exon

position:3686614:1
position: 3686614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3686773-3686884:1:exon

position:3686773:1
position: 3686773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3686884:1
position: 3686884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3686996-3687141:1:exon

position:3686996:1
position: 3686996
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3687141:1
position: 3687141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3687246-3687331:1:exon

position:3687246:1
position: 3687246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3687331:1
position: 3687331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3688129-3688224:1:exon

position:3688129:1
position: 3688129
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629061
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629061
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539006.1
SIO_010081: LOC123629061
subclass of: SO_0000673
so part of: LOC123629061
location: join(3686257..3686614,3686773..3686884,3686996..3687081,3687246..3687331,3688129..3688224)
location: region:3686257-3688224:1
so has part: feature:3686257-3686614:1:exon
so has part: feature:3686773-3686884:1:exon
so has part: feature:3686996-3687081:1:exon
so has part: feature:3687246-3687331:1:exon
so has part: feature:3688129-3688224:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3686257-3686614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3686773-3686884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3686996-3687081:1:exon

position:3687081:1
position: 3687081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3687246-3687331:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3688129-3688224:1:exon

LOC123629061
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629061
subclass of: SO_0000673
so part of: LOC123629061
location: join(3686465..3686614,3686773..3686884,3686996..3687141,3687246..3687311)
location: region:3686465-3687311:1
so has part: feature:3686465-3686614:1:exon
so has part: feature:3686773-3686884:1:exon
so has part: feature:3686996-3687141:1:exon
so has part: feature:3687246-3687311:1:exon

XP_045394961.1
type: Protein
SIO_000068: ncbiprotein

position:3686465:1
position: 3686465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3687311:1
position: 3687311
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3686465-3686614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3686773-3686884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3686996-3687141:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687246-3687311:1:exon

LOC123629061
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629061
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629061
subclass of: SO_0000673
so part of: LOC123629061
location: join(3686465..3686614,3686773..3686884,3686996..3687081,3687246..3687311)
location: region:3686465-3687311:1
so has part: feature:3686465-3686614:1:exon
so has part: feature:3686773-3686884:1:exon
so has part: feature:3686996-3687081:1:exon
so has part: feature:3687246-3687311:1:exon

XP_045394962.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3686465-3686614:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3686773-3686884:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3686996-3687081:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3687246-3687311:1:exon

LOC123629064
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3708790..3710724
location: region:3708790-3710724:1
so has part: feature:3708790-3710724:1:exon
subclass of: SO_0000010

123629064
type: Gene
SIO_000068: ncbigene

position:3708790:1
position: 3708790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3710724:1
position: 3710724
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3708790-3710724:1:exon

LOC123629064
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629064
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539013.1
SIO_010081: LOC123629064
subclass of: SO_0000673
so part of: LOC123629064
location: join(3708790..3709114,3709273..3709384,3709496..3709581,3709746..3709831,3710629..3710724)
location: region:3708790-3710724:1
so has part: feature:3708790-3709114:1:exon
so has part: feature:3709273-3709384:1:exon
so has part: feature:3709496-3709581:1:exon
so has part: feature:3709746-3709831:1:exon
so has part: feature:3710629-3710724:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3708790-3709114:1:exon

position:3709114:1
position: 3709114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3709273-3709384:1:exon

position:3709273:1
position: 3709273
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709384:1
position: 3709384
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3709496-3709581:1:exon

position:3709496:1
position: 3709496
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709581:1
position: 3709581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3709746-3709831:1:exon

position:3709746:1
position: 3709746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709831:1
position: 3709831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3710629-3710724:1:exon

position:3710629:1
position: 3710629
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629064
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629064
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539012.1
SIO_010081: LOC123629064
subclass of: SO_0000673
so part of: LOC123629064
location: join(3708793..3709114,3709273..3709384,3709496..3709641,3709746..3709831,3710629..3710724)
location: region:3708793-3710724:1
so has part: feature:3708793-3709114:1:exon
so has part: feature:3709273-3709384:1:exon
so has part: feature:3709496-3709641:1:exon
so has part: feature:3709746-3709831:1:exon
so has part: feature:3710629-3710724:1:exon

position:3708793:1
position: 3708793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3708793-3709114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3709273-3709384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3709496-3709641:1:exon

position:3709641:1
position: 3709641
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3709746-3709831:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3710629-3710724:1:exon

LOC123629064
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFSSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629064
subclass of: SO_0000673
so part of: LOC123629064
location: join(3708965..3709114,3709273..3709384,3709496..3709641,3709746..3709811)
location: region:3708965-3709811:1
so has part: feature:3708965-3709114:1:exon
so has part: feature:3709273-3709384:1:exon
so has part: feature:3709496-3709641:1:exon
so has part: feature:3709746-3709811:1:exon

XP_045394968.1
type: Protein
SIO_000068: ncbiprotein

position:3708965:1
position: 3708965
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3709811:1
position: 3709811
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3708965-3709114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3709273-3709384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3709496-3709641:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3709746-3709811:1:exon

LOC123629064
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629064
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFSSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629064
subclass of: SO_0000673
so part of: LOC123629064
location: join(3708965..3709114,3709273..3709384,3709496..3709581,3709746..3709811)
location: region:3708965-3709811:1
so has part: feature:3708965-3709114:1:exon
so has part: feature:3709273-3709384:1:exon
so has part: feature:3709496-3709581:1:exon
so has part: feature:3709746-3709811:1:exon

XP_045394969.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3708965-3709114:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3709273-3709384:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3709496-3709581:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3709746-3709811:1:exon

LOC123629074
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629074
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3717178..3717646
location: region:3717178-3717646:1
so has part: feature:3717178-3717646:1:exon
subclass of: SO_0000011

123629074
type: Gene
SIO_000068: ncbigene

position:3717178:1
position: 3717178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3717646:1
position: 3717646
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3717178-3717646:1:exon

LOC123629074
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629074
product: uncharacterized LOC123629074
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731894.1
SIO_010081: LOC123629074
subclass of: SO_0000673
so part of: LOC123629074
location: join(3717178..3717256,3717350..3717495,3717600..3717646)
location: region:3717178-3717646:1
so has part: feature:3717178-3717256:1:exon
so has part: feature:3717350-3717495:1:exon
so has part: feature:3717600-3717646:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3717178-3717256:1:exon

position:3717256:1
position: 3717256
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3717350-3717495:1:exon

position:3717350:1
position: 3717350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3717495:1
position: 3717495
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3717600-3717646:1:exon

position:3717600:1
position: 3717600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629063
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3731305..3733236
location: region:3731305-3733236:1
so has part: feature:3731305-3733236:1:exon
subclass of: SO_0000010

123629063
type: Gene
SIO_000068: ncbigene

position:3731305:1
position: 3731305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3733236:1
position: 3733236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731305-3733236:1:exon

LOC123629063
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629063
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539011.1
SIO_010081: LOC123629063
subclass of: SO_0000673
so part of: LOC123629063
location: join(3731305..3731626,3731785..3731896,3732008..3732093,3732258..3732343,3733141..3733236)
location: region:3731305-3733236:1
so has part: feature:3731305-3731626:1:exon
so has part: feature:3731785-3731896:1:exon
so has part: feature:3732008-3732093:1:exon
so has part: feature:3732258-3732343:1:exon
so has part: feature:3733141-3733236:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3731305-3731626:1:exon

position:3731626:1
position: 3731626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3731785-3731896:1:exon

position:3731785:1
position: 3731785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3731896:1
position: 3731896
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3732008-3732093:1:exon

position:3732008:1
position: 3732008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3732093:1
position: 3732093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3732258-3732343:1:exon

position:3732258:1
position: 3732258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3732343:1
position: 3732343
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3733141-3733236:1:exon

position:3733141:1
position: 3733141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629063
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629063
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539009.1
SIO_010081: LOC123629063
subclass of: SO_0000673
so part of: LOC123629063
location: join(3731308..3731626,3731785..3731896,3732008..3732153,3732258..3732343,3733141..3733236)
location: region:3731308-3733236:1
so has part: feature:3731308-3731626:1:exon
so has part: feature:3731785-3731896:1:exon
so has part: feature:3732008-3732153:1:exon
so has part: feature:3732258-3732343:1:exon
so has part: feature:3733141-3733236:1:exon

position:3731308:1
position: 3731308
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731308-3731626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3731785-3731896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732008-3732153:1:exon

position:3732153:1
position: 3732153
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3732258-3732343:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3733141-3733236:1:exon

LOC123629063
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629063
subclass of: SO_0000673
so part of: LOC123629063
location: join(3731477..3731626,3731785..3731896,3732008..3732153,3732258..3732323)
location: region:3731477-3732323:1
so has part: feature:3731477-3731626:1:exon
so has part: feature:3731785-3731896:1:exon
so has part: feature:3732008-3732153:1:exon
so has part: feature:3732258-3732323:1:exon

XP_045394965.1
type: Protein
SIO_000068: ncbiprotein

position:3731477:1
position: 3731477
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3732323:1
position: 3732323
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3731477-3731626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3731785-3731896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732008-3732153:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3732258-3732323:1:exon

LOC123629063
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629063
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629063
subclass of: SO_0000673
so part of: LOC123629063
location: join(3731477..3731626,3731785..3731896,3732008..3732093,3732258..3732323)
location: region:3731477-3732323:1
so has part: feature:3731477-3731626:1:exon
so has part: feature:3731785-3731896:1:exon
so has part: feature:3732008-3732093:1:exon
so has part: feature:3732258-3732323:1:exon

XP_045394967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3731477-3731626:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3731785-3731896:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3732008-3732093:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3732258-3732323:1:exon

LOC123629075
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629075
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3739692..3740160
location: region:3739692-3740160:1
so has part: feature:3739692-3740160:1:exon
subclass of: SO_0000011

123629075
type: Gene
SIO_000068: ncbigene

position:3739692:1
position: 3739692
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3740160:1
position: 3740160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3739692-3740160:1:exon

LOC123629075
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629075
product: uncharacterized LOC123629075
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731895.1
SIO_010081: LOC123629075
subclass of: SO_0000673
so part of: LOC123629075
location: join(3739692..3739770,3739864..3740009,3740114..3740160)
location: region:3739692-3740160:1
so has part: feature:3739692-3739770:1:exon
so has part: feature:3739864-3740009:1:exon
so has part: feature:3740114-3740160:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3739692-3739770:1:exon

position:3739770:1
position: 3739770
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3739864-3740009:1:exon

position:3739864:1
position: 3739864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3740009:1
position: 3740009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3740114-3740160:1:exon

position:3740114:1
position: 3740114
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629058
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3753778..3755756
location: region:3753778-3755756:1
so has part: feature:3753778-3755756:1:exon
subclass of: SO_0000010

123629058
type: Gene
SIO_000068: ncbigene

position:3753778:1
position: 3753778
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3755756:1
position: 3755756
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3753778-3755756:1:exon

LOC123629058
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629058
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538998.1
SIO_010081: LOC123629058
subclass of: SO_0000673
so part of: LOC123629058
location: join(3753778..3754140,3754299..3754410,3754522..3754667,3754772..3754857,3755661..3755756)
location: region:3753778-3755756:1
so has part: feature:3753778-3754140:1:exon
so has part: feature:3754299-3754410:1:exon
so has part: feature:3754522-3754667:1:exon
so has part: feature:3754772-3754857:1:exon
so has part: feature:3755661-3755756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3753778-3754140:1:exon

position:3754140:1
position: 3754140
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3754299-3754410:1:exon

position:3754299:1
position: 3754299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754410:1
position: 3754410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3754522-3754667:1:exon

position:3754522:1
position: 3754522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754667:1
position: 3754667
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3754772-3754857:1:exon

position:3754772:1
position: 3754772
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754857:1
position: 3754857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3755661-3755756:1:exon

position:3755661:1
position: 3755661
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629058
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629058
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045538999.1
SIO_010081: LOC123629058
subclass of: SO_0000673
so part of: LOC123629058
location: join(3753778..3754140,3754299..3754410,3754522..3754607,3754772..3754857,3755661..3755756)
location: region:3753778-3755756:1
so has part: feature:3753778-3754140:1:exon
so has part: feature:3754299-3754410:1:exon
so has part: feature:3754522-3754607:1:exon
so has part: feature:3754772-3754857:1:exon
so has part: feature:3755661-3755756:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3753778-3754140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3754299-3754410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3754522-3754607:1:exon

position:3754607:1
position: 3754607
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3754772-3754857:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3755661-3755756:1:exon

LOC123629058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLPAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629058
subclass of: SO_0000673
so part of: LOC123629058
location: join(3753991..3754140,3754299..3754410,3754522..3754667,3754772..3754837)
location: region:3753991-3754837:1
so has part: feature:3753991-3754140:1:exon
so has part: feature:3754299-3754410:1:exon
so has part: feature:3754522-3754667:1:exon
so has part: feature:3754772-3754837:1:exon

XP_045394954.1
type: Protein
SIO_000068: ncbiprotein

position:3753991:1
position: 3753991
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3754837:1
position: 3754837
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3753991-3754140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3754299-3754410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3754522-3754667:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3754772-3754837:1:exon

LOC123629058
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629058
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLPAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629058
subclass of: SO_0000673
so part of: LOC123629058
location: join(3753991..3754140,3754299..3754410,3754522..3754607,3754772..3754837)
location: region:3753991-3754837:1
so has part: feature:3753991-3754140:1:exon
so has part: feature:3754299-3754410:1:exon
so has part: feature:3754522-3754607:1:exon
so has part: feature:3754772-3754837:1:exon

XP_045394955.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3753991-3754140:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3754299-3754410:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3754522-3754607:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3754772-3754837:1:exon

LOC123629073
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629073
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3762146..3762679
location: region:3762146-3762679:1
so has part: feature:3762146-3762679:1:exon
subclass of: SO_0000011

123629073
type: Gene
SIO_000068: ncbigene

position:3762146:1
position: 3762146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762679:1
position: 3762679
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3762146-3762679:1:exon

LOC123629073
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629073
product: uncharacterized LOC123629073
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731893.1
SIO_010081: LOC123629073
subclass of: SO_0000673
so part of: LOC123629073
location: join(3762146..3762289,3762383..3762528,3762633..3762679)
location: region:3762146-3762679:1
so has part: feature:3762146-3762289:1:exon
so has part: feature:3762383-3762528:1:exon
so has part: feature:3762633-3762679:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3762146-3762289:1:exon

position:3762289:1
position: 3762289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3762383-3762528:1:exon

position:3762383:1
position: 3762383
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3762528:1
position: 3762528
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3762633-3762679:1:exon

position:3762633:1
position: 3762633
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629060
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3776301..3778188
location: region:3776301-3778188:1
so has part: feature:3776301-3778188:1:exon
subclass of: SO_0000010

123629060
type: Gene
SIO_000068: ncbigene

position:3776301:1
position: 3776301
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3778188:1
position: 3778188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3776301-3778188:1:exon

LOC123629060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629060
product: testis-specific Y-encoded protein 1-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539003.1
SIO_010081: LOC123629060
subclass of: SO_0000673
so part of: LOC123629060
location: join(3776301..3776658,3776817..3776928,3777040..3777185,3777290..3777375,3778173..3778188)
location: region:3776301-3778188:1
so has part: feature:3776301-3776658:1:exon
so has part: feature:3776817-3776928:1:exon
so has part: feature:3777040-3777185:1:exon
so has part: feature:3777290-3777375:1:exon
so has part: feature:3778173-3778188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3776301-3776658:1:exon

position:3776658:1
position: 3776658
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3776817-3776928:1:exon

position:3776817:1
position: 3776817
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3776928:1
position: 3776928
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3777040-3777185:1:exon

position:3777040:1
position: 3777040
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777185:1
position: 3777185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3777290-3777375:1:exon

position:3777290:1
position: 3777290
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777375:1
position: 3777375
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3778173-3778188:1:exon

position:3778173:1
position: 3778173
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629060
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629060
product: testis-specific Y-encoded protein 1-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539004.1
SIO_010081: LOC123629060
subclass of: SO_0000673
so part of: LOC123629060
location: join(3776301..3776658,3776817..3776928,3777040..3777125,3777290..3777375,3778173..3778188)
location: region:3776301-3778188:1
so has part: feature:3776301-3776658:1:exon
so has part: feature:3776817-3776928:1:exon
so has part: feature:3777040-3777125:1:exon
so has part: feature:3777290-3777375:1:exon
so has part: feature:3778173-3778188:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3776301-3776658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3776817-3776928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3777040-3777125:1:exon

position:3777125:1
position: 3777125
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3777290-3777375:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3778173-3778188:1:exon

LOC123629060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629060
subclass of: SO_0000673
so part of: LOC123629060
location: join(3776509..3776658,3776817..3776928,3777040..3777185,3777290..3777355)
location: region:3776509-3777355:1
so has part: feature:3776509-3776658:1:exon
so has part: feature:3776817-3776928:1:exon
so has part: feature:3777040-3777185:1:exon
so has part: feature:3777290-3777355:1:exon

XP_045394959.1
type: Protein
SIO_000068: ncbiprotein

position:3776509:1
position: 3776509
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3777355:1
position: 3777355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3776509-3776658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3776817-3776928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3777040-3777185:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3777290-3777355:1:exon

LOC123629060
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629060
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629060
subclass of: SO_0000673
so part of: LOC123629060
location: join(3776509..3776658,3776817..3776928,3777040..3777125,3777290..3777355)
location: region:3776509-3777355:1
so has part: feature:3776509-3776658:1:exon
so has part: feature:3776817-3776928:1:exon
so has part: feature:3777040-3777125:1:exon
so has part: feature:3777290-3777355:1:exon

XP_045394960.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3776509-3776658:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3776817-3776928:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3777040-3777125:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3777290-3777355:1:exon

LOC123629076
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629076
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3784485..3785005
location: region:3784485-3785005:1
so has part: feature:3784485-3785005:1:exon
subclass of: SO_0000011

123629076
type: Gene
SIO_000068: ncbigene

position:3784485:1
position: 3784485
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3785005:1
position: 3785005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3784485-3785005:1:exon

LOC123629076
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 9447
nc RNA class: lncRNA
gene: LOC123629076
product: uncharacterized LOC123629076
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XR_006731896.1
SIO_010081: LOC123629076
subclass of: SO_0000673
so part of: LOC123629076
location: join(3784485..3784499,3784683..3784794,3784888..3785005)
location: region:3784485-3785005:1
so has part: feature:3784485-3784499:1:exon
so has part: feature:3784683-3784794:1:exon
so has part: feature:3784888-3785005:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3784485-3784499:1:exon

position:3784499:1
position: 3784499
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3784683-3784794:1:exon

position:3784683:1
position: 3784683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3784794:1
position: 3784794
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3784888-3785005:1:exon

position:3784888:1
position: 3784888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629062
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3798821..3800773
location: region:3798821-3800773:1
so has part: feature:3798821-3800773:1:exon
subclass of: SO_0000010

123629062
type: Gene
SIO_000068: ncbigene

position:3798821:1
position: 3798821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3800773:1
position: 3800773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3798821-3800773:1:exon

LOC123629062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629062
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539007.1
SIO_010081: LOC123629062
subclass of: SO_0000673
so part of: LOC123629062
location: join(3798821..3799163,3799322..3799433,3799545..3799690,3799795..3799880,3800678..3800773)
location: region:3798821-3800773:1
so has part: feature:3798821-3799163:1:exon
so has part: feature:3799322-3799433:1:exon
so has part: feature:3799545-3799690:1:exon
so has part: feature:3799795-3799880:1:exon
so has part: feature:3800678-3800773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3798821-3799163:1:exon

position:3799163:1
position: 3799163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3799322-3799433:1:exon

position:3799322:1
position: 3799322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3799433:1
position: 3799433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3799545-3799690:1:exon

position:3799545:1
position: 3799545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3799690:1
position: 3799690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3799795-3799880:1:exon

position:3799795:1
position: 3799795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3799880:1
position: 3799880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3800678-3800773:1:exon

position:3800678:1
position: 3800678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629062
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629062
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539008.1
SIO_010081: LOC123629062
subclass of: SO_0000673
so part of: LOC123629062
location: join(3798821..3799163,3799322..3799433,3799545..3799630,3799795..3799880,3800678..3800773)
location: region:3798821-3800773:1
so has part: feature:3798821-3799163:1:exon
so has part: feature:3799322-3799433:1:exon
so has part: feature:3799545-3799630:1:exon
so has part: feature:3799795-3799880:1:exon
so has part: feature:3800678-3800773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3798821-3799163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3799322-3799433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799545-3799630:1:exon

position:3799630:1
position: 3799630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3799795-3799880:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3800678-3800773:1:exon

LOC123629062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629062
subclass of: SO_0000673
so part of: LOC123629062
location: join(3799014..3799163,3799322..3799433,3799545..3799690,3799795..3799860)
location: region:3799014-3799860:1
so has part: feature:3799014-3799163:1:exon
so has part: feature:3799322-3799433:1:exon
so has part: feature:3799545-3799690:1:exon
so has part: feature:3799795-3799860:1:exon

XP_045394963.1
type: Protein
SIO_000068: ncbiprotein

position:3799014:1
position: 3799014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3799860:1
position: 3799860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3799014-3799163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3799322-3799433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799545-3799690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3799795-3799860:1:exon

LOC123629062
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629062
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLAPLHYYPRDEDLV
SIO_010081: LOC123629062
subclass of: SO_0000673
so part of: LOC123629062
location: join(3799014..3799163,3799322..3799433,3799545..3799630,3799795..3799860)
location: region:3799014-3799860:1
so has part: feature:3799014-3799163:1:exon
so has part: feature:3799322-3799433:1:exon
so has part: feature:3799545-3799630:1:exon
so has part: feature:3799795-3799860:1:exon

XP_045394964.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3799014-3799163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3799322-3799433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3799545-3799630:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3799795-3799860:1:exon

LOC123629065
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3821305..3823272
location: region:3821305-3823272:1
so has part: feature:3821305-3823272:1:exon
subclass of: SO_0000010

123629065
type: Gene
SIO_000068: ncbigene

position:3821305:1
position: 3821305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3823272:1
position: 3823272
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3821305-3823272:1:exon

LOC123629065
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629065
product: testis-specific Y-encoded protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539014.1
SIO_010081: LOC123629065
subclass of: SO_0000673
so part of: LOC123629065
location: join(3821305..3821662,3821821..3821932,3822044..3822189,3822294..3822379,3823177..3823272)
location: region:3821305-3823272:1
so has part: feature:3821305-3821662:1:exon
so has part: feature:3821821-3821932:1:exon
so has part: feature:3822044-3822189:1:exon
so has part: feature:3822294-3822379:1:exon
so has part: feature:3823177-3823272:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3821305-3821662:1:exon

position:3821662:1
position: 3821662
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3821821-3821932:1:exon

position:3821821:1
position: 3821821
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3821932:1
position: 3821932
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3822044-3822189:1:exon

position:3822044:1
position: 3822044
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3822189:1
position: 3822189
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3822294-3822379:1:exon

position:3822294:1
position: 3822294
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3822379:1
position: 3822379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3823177-3823272:1:exon

position:3823177:1
position: 3823177
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629065
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629065
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIIKEYHLDITGYRASRSSAIEWFWDYEGEAPFKEQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629065
subclass of: SO_0000673
so part of: LOC123629065
location: join(3821513..3821662,3821821..3821932,3822044..3822189,3822294..3822359)
location: region:3821513-3822359:1
so has part: feature:3821513-3821662:1:exon
so has part: feature:3821821-3821932:1:exon
so has part: feature:3822044-3822189:1:exon
so has part: feature:3822294-3822359:1:exon

XP_045394970.1
type: Protein
SIO_000068: ncbiprotein

position:3821513:1
position: 3821513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3822359:1
position: 3822359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3821513-3821662:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3821821-3821932:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3822044-3822189:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3822294-3822359:1:exon

LOC123629066
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3843798..3845765
location: region:3843798-3845765:1
so has part: feature:3843798-3845765:1:exon
subclass of: SO_0000010

123629066
type: Gene
SIO_000068: ncbigene

position:3843798:1
position: 3843798
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3845765:1
position: 3845765
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3843798-3845765:1:exon

LOC123629066
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629066
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539015.1
SIO_010081: LOC123629066
subclass of: SO_0000673
so part of: LOC123629066
location: join(3843798..3844155,3844314..3844425,3844537..3844682,3844787..3844872,3845670..3845765)
location: region:3843798-3845765:1
so has part: feature:3843798-3844155:1:exon
so has part: feature:3844314-3844425:1:exon
so has part: feature:3844537-3844682:1:exon
so has part: feature:3844787-3844872:1:exon
so has part: feature:3845670-3845765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3843798-3844155:1:exon

position:3844155:1
position: 3844155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3844314-3844425:1:exon

position:3844314:1
position: 3844314
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3844425:1
position: 3844425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3844537-3844682:1:exon

position:3844537:1
position: 3844537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3844682:1
position: 3844682
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3844787-3844872:1:exon

position:3844787:1
position: 3844787
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3844872:1
position: 3844872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3845670-3845765:1:exon

position:3845670:1
position: 3845670
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629066
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629066
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539016.1
SIO_010081: LOC123629066
subclass of: SO_0000673
so part of: LOC123629066
location: join(3843798..3844155,3844314..3844425,3844537..3844622,3844787..3844872,3845670..3845765)
location: region:3843798-3845765:1
so has part: feature:3843798-3844155:1:exon
so has part: feature:3844314-3844425:1:exon
so has part: feature:3844537-3844622:1:exon
so has part: feature:3844787-3844872:1:exon
so has part: feature:3845670-3845765:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3843798-3844155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3844314-3844425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3844537-3844622:1:exon

position:3844622:1
position: 3844622
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3844787-3844872:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3845670-3845765:1:exon

LOC123629066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629066
subclass of: SO_0000673
so part of: LOC123629066
location: join(3844006..3844155,3844314..3844425,3844537..3844682,3844787..3844852)
location: region:3844006-3844852:1
so has part: feature:3844006-3844155:1:exon
so has part: feature:3844314-3844425:1:exon
so has part: feature:3844537-3844682:1:exon
so has part: feature:3844787-3844852:1:exon

XP_045394971.1
type: Protein
SIO_000068: ncbiprotein

position:3844006:1
position: 3844006
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3844852:1
position: 3844852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3844006-3844155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3844314-3844425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3844537-3844682:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3844787-3844852:1:exon

LOC123629066
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629066
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629066
subclass of: SO_0000673
so part of: LOC123629066
location: join(3844006..3844155,3844314..3844425,3844537..3844622,3844787..3844852)
location: region:3844006-3844852:1
so has part: feature:3844006-3844155:1:exon
so has part: feature:3844314-3844425:1:exon
so has part: feature:3844537-3844622:1:exon
so has part: feature:3844787-3844852:1:exon

XP_045394972.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3844006-3844155:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3844314-3844425:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3844537-3844622:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3844787-3844852:1:exon

LOC123629067
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3866302..3868269
location: region:3866302-3868269:1
so has part: feature:3866302-3868269:1:exon
subclass of: SO_0000010

123629067
type: Gene
SIO_000068: ncbigene

position:3866302:1
position: 3866302
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3868269:1
position: 3868269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3866302-3868269:1:exon

LOC123629067
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629067
product: testis-specific Y-encoded protein 1-like, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539017.1
SIO_010081: LOC123629067
subclass of: SO_0000673
so part of: LOC123629067
location: join(3866302..3866659,3866818..3866929,3867041..3867186,3867291..3867376,3868174..3868269)
location: region:3866302-3868269:1
so has part: feature:3866302-3866659:1:exon
so has part: feature:3866818-3866929:1:exon
so has part: feature:3867041-3867186:1:exon
so has part: feature:3867291-3867376:1:exon
so has part: feature:3868174-3868269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3866302-3866659:1:exon

position:3866659:1
position: 3866659
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3866818-3866929:1:exon

position:3866818:1
position: 3866818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3866929:1
position: 3866929
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3867041-3867186:1:exon

position:3867041:1
position: 3867041
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3867186:1
position: 3867186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3867291-3867376:1:exon

position:3867291:1
position: 3867291
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3867376:1
position: 3867376
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3868174-3868269:1:exon

position:3868174:1
position: 3868174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629067
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629067
product: testis-specific Y-encoded protein 1-like, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539018.1
SIO_010081: LOC123629067
subclass of: SO_0000673
so part of: LOC123629067
location: join(3866302..3866659,3866818..3866929,3867041..3867126,3867291..3867376,3868174..3868269)
location: region:3866302-3868269:1
so has part: feature:3866302-3866659:1:exon
so has part: feature:3866818-3866929:1:exon
so has part: feature:3867041-3867126:1:exon
so has part: feature:3867291-3867376:1:exon
so has part: feature:3868174-3868269:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3866302-3866659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3866818-3866929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3867041-3867126:1:exon

position:3867126:1
position: 3867126
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3867291-3867376:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3868174-3868269:1:exon

LOC123629067
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X1
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629067
subclass of: SO_0000673
so part of: LOC123629067
location: join(3866510..3866659,3866818..3866929,3867041..3867186,3867291..3867356)
location: region:3866510-3867356:1
so has part: feature:3866510-3866659:1:exon
so has part: feature:3866818-3866929:1:exon
so has part: feature:3867041-3867186:1:exon
so has part: feature:3867291-3867356:1:exon

XP_045394973.1
type: Protein
SIO_000068: ncbiprotein

position:3866510:1
position: 3866510
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3867356:1
position: 3867356
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3866510-3866659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3866818-3866929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3867041-3867186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3867291-3867356:1:exon

LOC123629067
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629067
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like isoform X2
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIVKEYHLDITGYRASRSSAIEWFWDYEGEAPFREQDSTDIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629067
subclass of: SO_0000673
so part of: LOC123629067
location: join(3866510..3866659,3866818..3866929,3867041..3867126,3867291..3867356)
location: region:3866510-3867356:1
so has part: feature:3866510-3866659:1:exon
so has part: feature:3866818-3866929:1:exon
so has part: feature:3867041-3867126:1:exon
so has part: feature:3867291-3867356:1:exon

XP_045394974.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3866510-3866659:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3866818-3866929:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3867041-3867126:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3867291-3867356:1:exon

LOC123629069
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3888806..3890773
location: region:3888806-3890773:1
so has part: feature:3888806-3890773:1:exon
subclass of: SO_0000010

123629069
type: Gene
SIO_000068: ncbigene

position:3888806:1
position: 3888806
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3890773:1
position: 3890773
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3888806-3890773:1:exon

LOC123629069
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629069
product: testis-specific Y-encoded protein 1-like
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539019.1
SIO_010081: LOC123629069
subclass of: SO_0000673
so part of: LOC123629069
location: join(3888806..3889163,3889322..3889433,3889545..3889690,3889795..3889880,3890678..3890773)
location: region:3888806-3890773:1
so has part: feature:3888806-3889163:1:exon
so has part: feature:3889322-3889433:1:exon
so has part: feature:3889545-3889690:1:exon
so has part: feature:3889795-3889880:1:exon
so has part: feature:3890678-3890773:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3888806-3889163:1:exon

position:3889163:1
position: 3889163
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3889322-3889433:1:exon

position:3889322:1
position: 3889322
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889433:1
position: 3889433
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3889545-3889690:1:exon

position:3889545:1
position: 3889545
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889690:1
position: 3889690
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3889795-3889880:1:exon

position:3889795:1
position: 3889795
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889880:1
position: 3889880
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3890678-3890773:1:exon

position:3890678:1
position: 3890678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629069
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629069
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: testis-specific Y-encoded protein 1-like
translation: MLSRHAAWLLASFPSVERLLDLRQIVYHPQLSAVITEQDKDVLSYMINLEVEEVSLENYRCRMKFFFLPNPYFRNQVIIKEYHLDITGYRASRSSAIEWFWDYEGEAPFKEQDSTDVSFFSWLCEHNCPGSNRIAEIISEDLWLTPLHYYPRDEDLV
SIO_010081: LOC123629069
subclass of: SO_0000673
so part of: LOC123629069
location: join(3889014..3889163,3889322..3889433,3889545..3889690,3889795..3889860)
location: region:3889014-3889860:1
so has part: feature:3889014-3889163:1:exon
so has part: feature:3889322-3889433:1:exon
so has part: feature:3889545-3889690:1:exon
so has part: feature:3889795-3889860:1:exon

XP_045394975.1
type: Protein
SIO_000068: ncbiprotein

position:3889014:1
position: 3889014
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3889860:1
position: 3889860
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3889014-3889163:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3889322-3889433:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3889545-3889690:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3889795-3889860:1:exon

LOC123629052
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 3965459..3976946
location: region:3965459-3976946:1
so has part: feature:3965459-3976946:1:exon
subclass of: SO_0000010

123629052
type: Gene
SIO_000068: ncbigene

position:3965459:1
position: 3965459
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3976946:1
position: 3976946
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:3965459-3976946:1:exon

LOC123629052
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629052
product: RNA-binding motif protein, X chromosome-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 30 Proteins, and 16% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045538984.1
SIO_010081: LOC123629052
subclass of: SO_0000673
so part of: LOC123629052
location: join(3965459..3965567,3966027..3966133,3968546..3968717,3970310..3970465,3973618..3973732,3974642..3974767,3974857..3974945,3976639..3976946)
location: region:3965459-3976946:1
so has part: feature:3965459-3965567:1:exon
so has part: feature:3966027-3966133:1:exon
so has part: feature:3968546-3968717:1:exon
so has part: feature:3970310-3970465:1:exon
so has part: feature:3973618-3973732:1:exon
so has part: feature:3974642-3974767:1:exon
so has part: feature:3974857-3974945:1:exon
so has part: feature:3976639-3976946:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:3965459-3965567:1:exon

position:3965567:1
position: 3965567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:3966027-3966133:1:exon

position:3966027:1
position: 3966027
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3966133:1
position: 3966133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:3968546-3968717:1:exon

position:3968546:1
position: 3968546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3968717:1
position: 3968717
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:3970310-3970465:1:exon

position:3970310:1
position: 3970310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3970465:1
position: 3970465
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3973618-3973732:1:exon

position:3973618:1
position: 3973618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3973732:1
position: 3973732
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:3974642-3974767:1:exon

position:3974642:1
position: 3974642
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974767:1
position: 3974767
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:3974857-3974945:1:exon

position:3974857:1
position: 3974857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:3974945:1
position: 3974945
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:3976639-3976946:1:exon

position:3976639:1
position: 3976639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629052
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629052
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: RNA-binding motif protein, X chromosome-like
translation: MMEADRPGKLFIGGLSSETNAKTLEAIFEKYGNIMEVLLIKDRETKKSRGFAFITFENPTDAKYAAKYMNGKSLDGKVIKVEQANKSSFESGGRWRAPLPRNRGPSRSQRYGRGGSEGSRGHPSRGGNLDDGGYTVNLNMSSSRGPFPVKRGPSSRSGGPPPKRSAPSAPARSSSGIGVRRGPESRGRENYGGAPRRKPVSSRRDDYMSPRDDGYAAKESYSSRDYPSSRDTKDYAPPSRQYSYRDYGHYGSRDERSSRGYSDRDGYSGGHDRDYAEHSRGSSYRDRYETYGSSCGAPPARGPPLTYGGRSSRYDDYNSSRDGYGGSWESYSSSRSDVYSSSRERAGRQKRGLPTSMDRVYPTPRESYISSSCRASRGDHGGSRSERGGRSRY
SIO_010081: LOC123629052
subclass of: SO_0000673
so part of: LOC123629052
location: join(3965459..3965567,3966027..3966133,3968546..3968717,3970310..3970465,3973618..3973732,3974642..3974767,3974857..3974945,3976639..3976946)
location: region:3965459-3976946:1
so has part: feature:3965459-3965567:1:exon
so has part: feature:3966027-3966133:1:exon
so has part: feature:3968546-3968717:1:exon
so has part: feature:3970310-3970465:1:exon
so has part: feature:3973618-3973732:1:exon
so has part: feature:3974642-3974767:1:exon
so has part: feature:3974857-3974945:1:exon
so has part: feature:3976639-3976946:1:exon

XP_045394940.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:3965459-3965567:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:3966027-3966133:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:3968546-3968717:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:3970310-3970465:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3973618-3973732:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:3974642-3974767:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:3974857-3974945:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:3976639-3976946:1:exon

LOC123629106
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4078076..4198354
location: region:4078076-4198354:1
so has part: feature:4078076-4198354:1:exon
subclass of: SO_0000010

123629106
type: Gene
SIO_000068: ncbigene

position:4078076:1
position: 4078076
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4198354:1
position: 4198354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4078076-4198354:1:exon

LOC123629106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629106
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539077.1
SIO_010081: LOC123629106
subclass of: SO_0000673
so part of: LOC123629106
location: join(4078076..4078149,4126246..4126334,4137751..4137858,4163339..4163484,4166349..4166619,4170517..4170649,4170930..4171071,4177362..4177425,4177529..4177626,4180828..4180888,4185395..4185516,4188791..4188865,4189142..4189269,4191138..4191303,4193476..4193577,4194814..4198354)
location: region:4078076-4198354:1
so has part: feature:4078076-4078149:1:exon
so has part: feature:4126246-4126334:1:exon
so has part: feature:4137751-4137858:1:exon
so has part: feature:4163339-4163484:1:exon
so has part: feature:4166349-4166619:1:exon
so has part: feature:4170517-4170649:1:exon
so has part: feature:4170930-4171071:1:exon
so has part: feature:4177362-4177425:1:exon
so has part: feature:4177529-4177626:1:exon
so has part: feature:4180828-4180888:1:exon
so has part: feature:4185395-4185516:1:exon
so has part: feature:4188791-4188865:1:exon
so has part: feature:4189142-4189269:1:exon
so has part: feature:4191138-4191303:1:exon
so has part: feature:4193476-4193577:1:exon
so has part: feature:4194814-4198354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4078076-4078149:1:exon

position:4078149:1
position: 4078149
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4126246-4126334:1:exon

position:4126246:1
position: 4126246
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4126334:1
position: 4126334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4137751-4137858:1:exon

position:4137751:1
position: 4137751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4137858:1
position: 4137858
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4163339-4163484:1:exon

position:4163339:1
position: 4163339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4163484:1
position: 4163484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4166349-4166619:1:exon

position:4166349:1
position: 4166349
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4166619:1
position: 4166619
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4170517-4170649:1:exon

position:4170517:1
position: 4170517
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4170649:1
position: 4170649
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4170930-4171071:1:exon

position:4170930:1
position: 4170930
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4171071:1
position: 4171071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4177362-4177425:1:exon

position:4177362:1
position: 4177362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4177425:1
position: 4177425
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4177529-4177626:1:exon

position:4177529:1
position: 4177529
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4177626:1
position: 4177626
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4180828-4180888:1:exon

position:4180828:1
position: 4180828
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4180888:1
position: 4180888
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4185395-4185516:1:exon

position:4185395:1
position: 4185395
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4185516:1
position: 4185516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:4188791-4188865:1:exon

position:4188791:1
position: 4188791
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4188865:1
position: 4188865
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:4189142-4189269:1:exon

position:4189142:1
position: 4189142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4189269:1
position: 4189269
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4191138-4191303:1:exon

position:4191138:1
position: 4191138
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4191303:1
position: 4191303
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:4193476-4193577:1:exon

position:4193476:1
position: 4193476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4193577:1
position: 4193577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:4194814-4198354:1:exon

position:4194814:1
position: 4194814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629106
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629106
product: F-box-like/WD repeat-containing protein TBL1X, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539078.1
SIO_010081: LOC123629106
subclass of: SO_0000673
so part of: LOC123629106
location: join(4078076..4078149,4137751..4137858,4163339..4163484,4166349..4166619,4170517..4170649,4170930..4171071,4177362..4177425,4177529..4177626,4180828..4180888,4185395..4185516,4188791..4188865,4189142..4189269,4191138..4191303,4193476..4193577,4194814..4198354)
location: region:4078076-4198354:1
so has part: feature:4078076-4078149:1:exon
so has part: feature:4137751-4137858:1:exon
so has part: feature:4163339-4163484:1:exon
so has part: feature:4166349-4166619:1:exon
so has part: feature:4170517-4170649:1:exon
so has part: feature:4170930-4171071:1:exon
so has part: feature:4177362-4177425:1:exon
so has part: feature:4177529-4177626:1:exon
so has part: feature:4180828-4180888:1:exon
so has part: feature:4185395-4185516:1:exon
so has part: feature:4188791-4188865:1:exon
so has part: feature:4189142-4189269:1:exon
so has part: feature:4191138-4191303:1:exon
so has part: feature:4193476-4193577:1:exon
so has part: feature:4194814-4198354:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4078076-4078149:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4137751-4137858:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4163339-4163484:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4166349-4166619:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4170517-4170649:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4170930-4171071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4177362-4177425:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4177529-4177626:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4180828-4180888:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4185395-4185516:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4188791-4188865:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4189142-4189269:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4191138-4191303:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4193476-4193577:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4194814-4198354:1:exon

LOC123629106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAAAAVAAAAATATMATAAVSQQNPPKNGEATVNGEENGTHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSSGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHICRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSSPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC123629106
subclass of: SO_0000673
so part of: LOC123629106
location: join(4137801..4137858,4163339..4163484,4166349..4166619,4170517..4170649,4170930..4171071,4177362..4177425,4177529..4177626,4180828..4180888,4185395..4185516,4188791..4188865,4189142..4189269,4191138..4191303,4193476..4193577,4194814..4194840)
location: region:4137801-4194840:1
so has part: feature:4137801-4137858:1:exon
so has part: feature:4163339-4163484:1:exon
so has part: feature:4166349-4166619:1:exon
so has part: feature:4170517-4170649:1:exon
so has part: feature:4170930-4171071:1:exon
so has part: feature:4177362-4177425:1:exon
so has part: feature:4177529-4177626:1:exon
so has part: feature:4180828-4180888:1:exon
so has part: feature:4185395-4185516:1:exon
so has part: feature:4188791-4188865:1:exon
so has part: feature:4189142-4189269:1:exon
so has part: feature:4191138-4191303:1:exon
so has part: feature:4193476-4193577:1:exon
so has part: feature:4194814-4194840:1:exon

XP_045395033.1
type: Protein
SIO_000068: ncbiprotein

position:4137801:1
position: 4137801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4194840:1
position: 4194840
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4137801-4137858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4163339-4163484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4166349-4166619:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4170517-4170649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4170930-4171071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4177362-4177425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4177529-4177626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4180828-4180888:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4185395-4185516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4188791-4188865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4189142-4189269:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4191138-4191303:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4193476-4193577:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4194814-4194840:1:exon

LOC123629106
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629106
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: F-box-like/WD repeat-containing protein TBL1X
translation: MSITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGRPIESLSLIDAVMPDVVQTRQQAFREKLAQQQASVAATAAAAAAAVAAAAATATMATAAVSQQNPPKNGEATVNGEENGTHAINNHSKPMEIDGDVEIPPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSSGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNSDGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHICRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSSPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSVCVLDLRK
SIO_010081: LOC123629106
subclass of: SO_0000673
so part of: LOC123629106
location: join(4137801..4137858,4163339..4163484,4166349..4166619,4170517..4170649,4170930..4171071,4177362..4177425,4177529..4177626,4180828..4180888,4185395..4185516,4188791..4188865,4189142..4189269,4191138..4191303,4193476..4193577,4194814..4194840)
location: region:4137801-4194840:1
so has part: feature:4137801-4137858:1:exon
so has part: feature:4163339-4163484:1:exon
so has part: feature:4166349-4166619:1:exon
so has part: feature:4170517-4170649:1:exon
so has part: feature:4170930-4171071:1:exon
so has part: feature:4177362-4177425:1:exon
so has part: feature:4177529-4177626:1:exon
so has part: feature:4180828-4180888:1:exon
so has part: feature:4185395-4185516:1:exon
so has part: feature:4188791-4188865:1:exon
so has part: feature:4189142-4189269:1:exon
so has part: feature:4191138-4191303:1:exon
so has part: feature:4193476-4193577:1:exon
so has part: feature:4194814-4194840:1:exon

XP_045395034.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4137801-4137858:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4163339-4163484:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4166349-4166619:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4170517-4170649:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4170930-4171071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4177362-4177425:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4177529-4177626:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4180828-4180888:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4185395-4185516:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4188791-4188865:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4189142-4189269:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4191138-4191303:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4193476-4193577:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4194814-4194840:1:exon

LOC123629085
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4236413..4410351
location: region:4236413-4410351:1
so has part: feature:4236413-4410351:1:exon
subclass of: SO_0000010

123629085
type: Gene
SIO_000068: ncbigene

position:4236413:1
position: 4236413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4410351:1
position: 4410351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236413-4410351:1:exon

LOC123629085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629085
product: protein Shroom2-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 4 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539033.1
SIO_010081: LOC123629085
subclass of: SO_0000673
so part of: LOC123629085
location: join(4236413..4236577,4339338..4339489,4353081..4353212,4356804..4359234,4360497..4360594,4388494..4389096,4393781..4394299,4395410..4395581,4401652..4401924,4404588..4404857,4409984..4410351)
location: region:4236413-4410351:1
so has part: feature:4236413-4236577:1:exon
so has part: feature:4339338-4339489:1:exon
so has part: feature:4353081-4353212:1:exon
so has part: feature:4356804-4359234:1:exon
so has part: feature:4360497-4360594:1:exon
so has part: feature:4388494-4389096:1:exon
so has part: feature:4393781-4394299:1:exon
so has part: feature:4395410-4395581:1:exon
so has part: feature:4401652-4401924:1:exon
so has part: feature:4404588-4404857:1:exon
so has part: feature:4409984-4410351:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4236413-4236577:1:exon

position:4236577:1
position: 4236577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4339338-4339489:1:exon

position:4339338:1
position: 4339338
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4339489:1
position: 4339489
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:4353081-4353212:1:exon

position:4353081:1
position: 4353081
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4353212:1
position: 4353212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:4356804-4359234:1:exon

position:4356804:1
position: 4356804
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4359234:1
position: 4359234
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:4360497-4360594:1:exon

position:4360497:1
position: 4360497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4360594:1
position: 4360594
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:4388494-4389096:1:exon

position:4388494:1
position: 4388494
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4389096:1
position: 4389096
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:4393781-4394299:1:exon

position:4393781:1
position: 4393781
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4394299:1
position: 4394299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:4395410-4395581:1:exon

position:4395410:1
position: 4395410
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4395581:1
position: 4395581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4401652-4401924:1:exon

position:4401652:1
position: 4401652
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4401924:1
position: 4401924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4404588-4404857:1:exon

position:4404588:1
position: 4404588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4404857:1
position: 4404857
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:4409984-4410351:1:exon

position:4409984:1
position: 4409984
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC123629085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629085
product: protein Shroom2-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539032.1
SIO_010081: LOC123629085
subclass of: SO_0000673
so part of: LOC123629085
location: join(4236413..4236577,4339338..4339489,4353081..4353212,4356804..4359234,4360497..4360594,4388494..4389096,4393781..4394299,4395410..4395581,4401652..4401924,4404588..4407250)
location: region:4236413-4407250:1
so has part: feature:4236413-4236577:1:exon
so has part: feature:4339338-4339489:1:exon
so has part: feature:4353081-4353212:1:exon
so has part: feature:4356804-4359234:1:exon
so has part: feature:4360497-4360594:1:exon
so has part: feature:4388494-4389096:1:exon
so has part: feature:4393781-4394299:1:exon
so has part: feature:4395410-4395581:1:exon
so has part: feature:4401652-4401924:1:exon
so has part: feature:4404588-4407250:1:exon

position:4407250:1
position: 4407250
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236413-4236577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4339338-4339489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4353081-4353212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4356804-4359234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4360497-4360594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4388494-4389096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4393781-4394299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4395410-4395581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4401652-4401924:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4404588-4407250:1:exon

LOC123629085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Shroom2-like isoform X1
translation: MEGAEPRARPERPAEAEARAADGGRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGSKAAAVDKLLAGDEIVGINDIGLSGFRQEAICLVKGSHKTLKLVVKRKSELSWRPHSWHATKFSDSHIEPVASLFPSASGCPSWHGWHHSSSSSHDLSSSWEQTSLQRTSGHFSSLGSVDSLDHPSHPYPSGRLSTAKSNSSIDHLGGHSQRDSAYGSFSTSSSTPDHTLSKADASSAENILYSEGLWDASRQGGSWQGQAASDPQGLEERLGCFPPRALGDSSKSPRPEDSAEPKPASSGRANFGPVWYVPDKRKAPSSPPPPPPPLRSDSFAATKSHEKAQGPPLSEAATTRHFMALARAQPQSDWRPDPTDRPRRLVRPSSGKGAGGPGYLQEARLDFGWPSSEDRAPGRLQASLSSTDVRFPQPPHGGQHPHQYSDESPGAPVSPRELPAMGLGPEPPTAHFQDDSPPQVRWLSAADQKADVSGQGSRHCVPTRQPLQAGAKAAQPRGGCWPSDAGLGALQRPPSQLVGQSPRRHLPQHEGVPDARETGRCDPPDAGAEGCSTATQEPPGASHADKAGQQTATDGFKWEDGESSRISPQKTPLLHSLTREGTCRPENGQGGGLAKPPPFDAQVGRPTRRSDRFATTLRNEIQMRRAKLQKSKSTATLTGAGDTEDAEGGWRAELGGAASTPPEGPVTGTYKDHLKEAQARVLRATSFKRRDLDPNPVNQYPRSPEHRTGHHGASASFPGDPDTVPPFWETGPAKPASPGGGVPHIPRIGGRKRFTAEQKLKSYSEPEKINEVGLAGDRGPRQLPRTPEDTVGTFADRWKFFEETSKPLPQRPGQRPVLHALPRERPRTAGRGCEGAEPRPRTSSFAESLGGHRKAEKAGELEPPQRLGTFAEYQASWKEQRKPLEARSSGRYHSADDILDVGLDQHERPRYIHERSRSSPSTDHYKQEPSVEPRRQAEDAREQRALPSIVQAEEGRSAPRQAGAPCQEGSAGTGRRPPIQNPQKPPTSSESSHTWKAPAPPGEGRGRAGTLPRDYRYPEESGPADLGQHARGQDSRPLSTALRAPRKCCGLEGPPAPTHLVAPGRALSVPPEDTCVARLSLPHGPSVARSAQPQDAPEAAACQHVSQGATRPEPQAPPPPAGQALPLRMAMETSRSPSPQFAPQKLTDKPPLLMQDEESTRIERVMDNNTTVKMVPIKIVHSESQPERESRQSLARPAELPALPSGLEKDQIKTLSTSEQFYSRFCVYTRQGAEPEPPGARAPPEKDGCASPPGLSYVKAKEKTVEDLKSEELAREIVGKDKSLADILDPSVKIKTAMDLMEGIFPKDEHLLEEAQQRRKLLPKIPSPRTTEERKEEPRAPAAVSLATNSTYYSTSAPKAELLIKMKDLQEQQEPEEDSGSDVDHDLSVKKQELIESISRKLQVLREARESLLEDVQANTALGAEVEAIVKGVCKPSEFDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDSASPGDRQSLLEKQRVLVQQHEDAKELKENLDRRERVVLDILASYLGEESLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERGK
SIO_010081: LOC123629085
subclass of: SO_0000673
so part of: LOC123629085
location: join(4236413..4236577,4339338..4339489,4353081..4353212,4356804..4359234,4360497..4360594,4388494..4389096,4393781..4394299,4395410..4395581,4401652..4401924,4404588..4404854)
location: region:4236413-4404854:1
so has part: feature:4236413-4236577:1:exon
so has part: feature:4339338-4339489:1:exon
so has part: feature:4353081-4353212:1:exon
so has part: feature:4356804-4359234:1:exon
so has part: feature:4360497-4360594:1:exon
so has part: feature:4388494-4389096:1:exon
so has part: feature:4393781-4394299:1:exon
so has part: feature:4395410-4395581:1:exon
so has part: feature:4401652-4401924:1:exon
so has part: feature:4404588-4404854:1:exon

XP_045394988.1
type: Protein
SIO_000068: ncbiprotein

position:4404854:1
position: 4404854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236413-4236577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4339338-4339489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4353081-4353212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4356804-4359234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4360497-4360594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4388494-4389096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4393781-4394299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4395410-4395581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4401652-4401924:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4404588-4404854:1:exon

LOC123629085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Shroom2-like isoform X1
translation: MEGAEPRARPERPAEAEARAADGGRLVEVQLSGGAPWGFTLKGGREHGEPLVITKIEEGSKAAAVDKLLAGDEIVGINDIGLSGFRQEAICLVKGSHKTLKLVVKRKSELSWRPHSWHATKFSDSHIEPVASLFPSASGCPSWHGWHHSSSSSHDLSSSWEQTSLQRTSGHFSSLGSVDSLDHPSHPYPSGRLSTAKSNSSIDHLGGHSQRDSAYGSFSTSSSTPDHTLSKADASSAENILYSEGLWDASRQGGSWQGQAASDPQGLEERLGCFPPRALGDSSKSPRPEDSAEPKPASSGRANFGPVWYVPDKRKAPSSPPPPPPPLRSDSFAATKSHEKAQGPPLSEAATTRHFMALARAQPQSDWRPDPTDRPRRLVRPSSGKGAGGPGYLQEARLDFGWPSSEDRAPGRLQASLSSTDVRFPQPPHGGQHPHQYSDESPGAPVSPRELPAMGLGPEPPTAHFQDDSPPQVRWLSAADQKADVSGQGSRHCVPTRQPLQAGAKAAQPRGGCWPSDAGLGALQRPPSQLVGQSPRRHLPQHEGVPDARETGRCDPPDAGAEGCSTATQEPPGASHADKAGQQTATDGFKWEDGESSRISPQKTPLLHSLTREGTCRPENGQGGGLAKPPPFDAQVGRPTRRSDRFATTLRNEIQMRRAKLQKSKSTATLTGAGDTEDAEGGWRAELGGAASTPPEGPVTGTYKDHLKEAQARVLRATSFKRRDLDPNPVNQYPRSPEHRTGHHGASASFPGDPDTVPPFWETGPAKPASPGGGVPHIPRIGGRKRFTAEQKLKSYSEPEKINEVGLAGDRGPRQLPRTPEDTVGTFADRWKFFEETSKPLPQRPGQRPVLHALPRERPRTAGRGCEGAEPRPRTSSFAESLGGHRKAEKAGELEPPQRLGTFAEYQASWKEQRKPLEARSSGRYHSADDILDVGLDQHERPRYIHERSRSSPSTDHYKQEPSVEPRRQAEDAREQRALPSIVQAEEGRSAPRQAGAPCQEGSAGTGRRPPIQNPQKPPTSSESSHTWKAPAPPGEGRGRAGTLPRDYRYPEESGPADLGQHARGQDSRPLSTALRAPRKCCGLEGPPAPTHLVAPGRALSVPPEDTCVARLSLPHGPSVARSAQPQDAPEAAACQHVSQGATRPEPQAPPPPAGQALPLRMAMETSRSPSPQFAPQKLTDKPPLLMQDEESTRIERVMDNNTTVKMVPIKIVHSESQPERESRQSLARPAELPALPSGLEKDQIKTLSTSEQFYSRFCVYTRQGAEPEPPGARAPPEKDGCASPPGLSYVKAKEKTVEDLKSEELAREIVGKDKSLADILDPSVKIKTAMDLMEGIFPKDEHLLEEAQQRRKLLPKIPSPRTTEERKEEPRAPAAVSLATNSTYYSTSAPKAELLIKMKDLQEQQEPEEDSGSDVDHDLSVKKQELIESISRKLQVLREARESLLEDVQANTALGAEVEAIVKGVCKPSEFDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDSASPGDRQSLLEKQRVLVQQHEDAKELKENLDRRERVVLDILASYLGEESLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERGK
SIO_010081: LOC123629085
subclass of: SO_0000673
so part of: LOC123629085
location: join(4236413..4236577,4339338..4339489,4353081..4353212,4356804..4359234,4360497..4360594,4388494..4389096,4393781..4394299,4395410..4395581,4401652..4401924,4404588..4404854)
location: region:4236413-4404854:1
so has part: feature:4236413-4236577:1:exon
so has part: feature:4339338-4339489:1:exon
so has part: feature:4353081-4353212:1:exon
so has part: feature:4356804-4359234:1:exon
so has part: feature:4360497-4360594:1:exon
so has part: feature:4388494-4389096:1:exon
so has part: feature:4393781-4394299:1:exon
so has part: feature:4395410-4395581:1:exon
so has part: feature:4401652-4401924:1:exon
so has part: feature:4404588-4404854:1:exon

XP_045394989.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4236413-4236577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4339338-4339489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4353081-4353212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4356804-4359234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4360497-4360594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4388494-4389096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4393781-4394299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4395410-4395581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4401652-4401924:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4404588-4404854:1:exon

LOC123629085
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629085
product: protein Shroom2-like, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transcript id: XM_045539035.1
SIO_010081: LOC123629085
subclass of: SO_0000673
so part of: LOC123629085
location: join(4236533..4236577,4339338..4339489,4353081..4353212,4356804..4359234,4360497..4360594,4388494..4389096,4393781..4394299,4395410..4395581,4401655..4401924,4404588..4407250)
location: region:4236533-4407250:1
so has part: feature:4236533-4236577:1:exon
so has part: feature:4339338-4339489:1:exon
so has part: feature:4353081-4353212:1:exon
so has part: feature:4356804-4359234:1:exon
so has part: feature:4360497-4360594:1:exon
so has part: feature:4388494-4389096:1:exon
so has part: feature:4393781-4394299:1:exon
so has part: feature:4395410-4395581:1:exon
so has part: feature:4401655-4401924:1:exon
so has part: feature:4404588-4407250:1:exon

position:4236533:1
position: 4236533
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4236533-4236577:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4339338-4339489:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4353081-4353212:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4356804-4359234:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4360497-4360594:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4388494-4389096:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4393781-4394299:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4395410-4395581:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4401655-4401924:1:exon

position:4401655:1
position: 4401655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4404588-4407250:1:exon

LOC123629085
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629085
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein Shroom2-like isoform X2
translation: MALARAQPQSDWRPDPTDRPRRLVRPSSGKGAGGPGYLQEARLDFGWPSSEDRAPGRLQASLSSTDVRFPQPPHGGQHPHQYSDESPGAPVSPRELPAMGLGPEPPTAHFQDDSPPQVRWLSAADQKADVSGQGSRHCVPTRQPLQAGAKAAQPRGGCWPSDAGLGALQRPPSQLVGQSPRRHLPQHEGVPDARETGRCDPPDAGAEGCSTATQEPPGASHADKAGQQTATDGFKWEDGESSRISPQKTPLLHSLTREGTCRPENGQGGGLAKPPPFDAQVGRPTRRSDRFATTLRNEIQMRRAKLQKSKSTATLTGAGDTEDAEGGWRAELGGAASTPPEGPVTGTYKDHLKEAQARVLRATSFKRRDLDPNPVNQYPRSPEHRTGHHGASASFPGDPDTVPPFWETGPAKPASPGGGVPHIPRIGGRKRFTAEQKLKSYSEPEKINEVGLAGDRGPRQLPRTPEDTVGTFADRWKFFEETSKPLPQRPGQRPVLHALPRERPRTAGRGCEGAEPRPRTSSFAESLGGHRKAEKAGELEPPQRLGTFAEYQASWKEQRKPLEARSSGRYHSADDILDVGLDQHERPRYIHERSRSSPSTDHYKQEPSVEPRRQAEDAREQRALPSIVQAEEGRSAPRQAGAPCQEGSAGTGRRPPIQNPQKPPTSSESSHTWKAPAPPGEGRGRAGTLPRDYRYPEESGPADLGQHARGQDSRPLSTALRAPRKCCGLEGPPAPTHLVAPGRALSVPPEDTCVARLSLPHGPSVARSAQPQDAPEAAACQHVSQGATRPEPQAPPPPAGQALPLRMAMETSRSPSPQFAPQKLTDKPPLLMQDEESTRIERVMDNNTTVKMVPIKIVHSESQPERESRQSLARPAELPALPSGLEKDQIKTLSTSEQFYSRFCVYTRQGAEPEPPGARAPPEKDGCASPPGLSYVKAKEKTVEDLKSEELAREIVGKDKSLADILDPSVKIKTAMDLMEGIFPKDEHLLEEAQQRRKLLPKIPSPRTTEERKEEPRAPAAVSLATNSTYYSTSAPKAELLIKMKDLQEQQEPEEDSGSDVDHDLSVKKELIESISRKLQVLREARESLLEDVQANTALGAEVEAIVKGVCKPSEFDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDSASPGDRQSLLEKQRVLVQQHEDAKELKENLDRRERVVLDILASYLGEESLADYEHFVKMKSALIIEQRELEDKIHLGEEQLKCLFDSLQPERGK
SIO_010081: LOC123629085
subclass of: SO_0000673
so part of: LOC123629085
location: join(4357420..4359234,4360497..4360594,4388494..4389096,4393781..4394299,4395410..4395581,4401655..4401924,4404588..4404854)
location: region:4357420-4404854:1
so has part: feature:4357420-4359234:1:exon
so has part: feature:4360497-4360594:1:exon
so has part: feature:4388494-4389096:1:exon
so has part: feature:4393781-4394299:1:exon
so has part: feature:4395410-4395581:1:exon
so has part: feature:4401655-4401924:1:exon
so has part: feature:4404588-4404854:1:exon

XP_045394991.1
type: Protein
SIO_000068: ncbiprotein

position:4357420:1
position: 4357420
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4357420-4359234:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4360497-4360594:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4388494-4389096:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4393781-4394299:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4395410-4395581:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4401655-4401924:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4404588-4404854:1:exon

LOC123629082
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629082
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 4421910..4423175
location: region:4421910-4423175:1
so has part: feature:4421910-4423175:1:exon
subclass of: SO_0000010

123629082
type: Gene
SIO_000068: ncbigene

position:4421910:1
position: 4421910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4423175:1
position: 4423175
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4421910-4423175:1:exon

LOC123629082
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629082
product: claudin-34-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_045539029.1
SIO_010081: LOC123629082
subclass of: SO_0000673
so part of: LOC123629082
location: 4421910..4423175
location: region:4421910-4423175:1
so has part: feature:4421910-4423175:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4421910-4423175:1:exon

LOC123629082
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629082
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
transl except: (pos:4422317..4422319,aa:OTHER)
product: LOW QUALITY PROTEIN: claudin-34-like
translation: MPLLSNSANRQVAGFVIATTGXILSSTSMGLVEWRVWHMDDPSFFPTGLACVRMWRVCIYHHHTNISTAKFCHQYTYYDDFLPLDSRIAQHLMLLASILGLMGRGFSIYALWNVYVGILQRHDACHAFVVSGTLNMIAGVCIIIAVLQNYYSITNLQGIAFLPSFQLPFKSDTQETGSTAFVASLGAFLMLLRRLFFSLTNFPQTSK
SIO_010081: LOC123629082
subclass of: SO_0000673
so part of: LOC123629082
location: 4422254..4422877
location: region:4422254-4422877:1
so has part: feature:4422254-4422877:1:exon

XP_045394985.1
type: Protein
SIO_000068: ncbiprotein

position:4422254:1
position: 4422254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:4422877:1
position: 4422877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4422254-4422877:1:exon

LOC123629096
type: Gene
subclass of: SO_0000704
RO_0002162: 9447
gene: LOC123629096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(4586534..4780268)
location: region:4586534-4780268:-1
so has part: feature:4586534-4780268:-1:exon
subclass of: SO_0000010

123629096
type: Gene
SIO_000068: ncbigene

position:4586534:-1
position: 4586534
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4780268:-1
position: 4780268
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4586534-4780268:-1:exon

LOC123629096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629096
product: histone demethylase UTY, transcript variant X2
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539057.1
SIO_010081: LOC123629096
subclass of: SO_0000673
so part of: LOC123629096
location: complement(join(4586534..4587382,4588427..4588597,4591547..4591673,4608387..4608528,4609271..4609458,4611877..4611991,4614033..4614181,4614670..4614744,4614817..4614881,4617654..4617859,4618445..4618550,4619981..4620110,4625762..4626531,4659058..4659453,4660120..4660218,4661087..4661182,4663003..4663222,4663348..4663446,4667799..4667925,4670478..4670571,4706826..4706860,4709345..4709399,4718783..4718903,4722148..4722206,4748960..4749009,4767994..4768102,4779472..4779535,4779747..4780268))
location: region:4586534-4780268:-1
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so has part: feature:4767994-4768102:-1:exon
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so has part: feature:4663003-4663222:-1:exon
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so has part: feature:4659058-4659453:-1:exon
so has part: feature:4625762-4626531:-1:exon
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so has part: feature:4588427-4588597:-1:exon
so has part: feature:4586534-4587382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4779747-4780268:-1:exon

position:4779747:-1
position: 4779747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:4779472-4779535:-1:exon

position:4779472:-1
position: 4779472
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position:4779535:-1
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type: ReverseStrandPosition
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urn:…
SIO_000300: 3
SIO_000628: feature:4767994-4768102:-1:exon

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position: 4767994
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type: ReverseStrandPosition
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position:4768102:-1
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reference: sequence
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urn:…
SIO_000300: 4
SIO_000628: feature:4748960-4749009:-1:exon

position:4748960:-1
position: 4748960
reference: sequence
type: ReverseStrandPosition
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position:4749009:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 5
SIO_000628: feature:4722148-4722206:-1:exon

position:4722148:-1
position: 4722148
reference: sequence
type: ReverseStrandPosition
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position:4722206:-1
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reference: sequence
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urn:…
SIO_000300: 6
SIO_000628: feature:4718783-4718903:-1:exon

position:4718783:-1
position: 4718783
reference: sequence
type: ReverseStrandPosition
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position:4718903:-1
position: 4718903
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 7
SIO_000628: feature:4709345-4709399:-1:exon

position:4709345:-1
position: 4709345
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4709399:-1
position: 4709399
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 8
SIO_000628: feature:4706826-4706860:-1:exon

position:4706826:-1
position: 4706826
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4706860:-1
position: 4706860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:4670478-4670571:-1:exon

position:4670478:-1
position: 4670478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4670571:-1
position: 4670571
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:4667799-4667925:-1:exon

position:4667799:-1
position: 4667799
reference: sequence
type: ReverseStrandPosition
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position:4667925:-1
position: 4667925
reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:4663348-4663446:-1:exon

position:4663348:-1
position: 4663348
reference: sequence
type: ReverseStrandPosition
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position:4663446:-1
position: 4663446
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 12
SIO_000628: feature:4663003-4663222:-1:exon

position:4663003:-1
position: 4663003
reference: sequence
type: ReverseStrandPosition
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position:4663222:-1
position: 4663222
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type: ReverseStrandPosition
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urn:…
SIO_000300: 13
SIO_000628: feature:4661087-4661182:-1:exon

position:4661087:-1
position: 4661087
reference: sequence
type: ReverseStrandPosition
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position:4661182:-1
position: 4661182
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 14
SIO_000628: feature:4660120-4660218:-1:exon

position:4660120:-1
position: 4660120
reference: sequence
type: ReverseStrandPosition
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position:4660218:-1
position: 4660218
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 15
SIO_000628: feature:4659058-4659453:-1:exon

position:4659058:-1
position: 4659058
reference: sequence
type: ReverseStrandPosition
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position:4659453:-1
position: 4659453
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 16
SIO_000628: feature:4625762-4626531:-1:exon

position:4625762:-1
position: 4625762
reference: sequence
type: ReverseStrandPosition
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position:4626531:-1
position: 4626531
reference: sequence
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urn:…
SIO_000300: 17
SIO_000628: feature:4619981-4620110:-1:exon

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position: 4619981
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type: ReverseStrandPosition
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position:4620110:-1
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urn:…
SIO_000300: 18
SIO_000628: feature:4618445-4618550:-1:exon

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position: 4618445
reference: sequence
type: ReverseStrandPosition
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position:4618550:-1
position: 4618550
reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 19
SIO_000628: feature:4617654-4617859:-1:exon

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position: 4617654
reference: sequence
type: ReverseStrandPosition
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position:4617859:-1
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reference: sequence
type: ReverseStrandPosition
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urn:…
SIO_000300: 20
SIO_000628: feature:4614817-4614881:-1:exon

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urn:…
SIO_000300: 21
SIO_000628: feature:4614670-4614744:-1:exon

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position:4614744:-1
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urn:…
SIO_000300: 22
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urn:…
SIO_000300: 23
SIO_000628: feature:4611877-4611991:-1:exon

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type: ReverseStrandPosition
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position:4611991:-1
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urn:…
SIO_000300: 24
SIO_000628: feature:4609271-4609458:-1:exon

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urn:…
SIO_000300: 25
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urn:…
SIO_000300: 26
SIO_000628: feature:4591547-4591673:-1:exon

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position:4591673:-1
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urn:…
SIO_000300: 27
SIO_000628: feature:4588427-4588597:-1:exon

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position:4588597:-1
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urn:…
SIO_000300: 28
SIO_000628: feature:4586534-4587382:-1:exon

position:4587382:-1
position: 4587382
reference: sequence
type: ReverseStrandPosition
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LOC123629096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629096
product: histone demethylase UTY, transcript variant X4
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539059.1
SIO_010081: LOC123629096
subclass of: SO_0000673
so part of: LOC123629096
location: complement(join(4586534..4587382,4588427..4588597,4591547..4591673,4608387..4608528,4609271..4609458,4611877..4611991,4614033..4614181,4614670..4614744,4614817..4614881,4617654..4617859,4618445..4618550,4619981..4620110,4625762..4626531,4660120..4660218,4661087..4661182,4662318..4662452,4663003..4663222,4663348..4663446,4667799..4667925,4670478..4670571,4706826..4706860,4709345..4709399,4718783..4718903,4722148..4722206,4748960..4749009,4767994..4768102,4779472..4779535,4779747..4780268))
location: region:4586534-4780268:-1
so has part: feature:4779747-4780268:-1:exon
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so has part: feature:4591547-4591673:-1:exon
so has part: feature:4588427-4588597:-1:exon
so has part: feature:4586534-4587382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4779747-4780268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779472-4779535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4767994-4768102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4748960-4749009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4722148-4722206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4718783-4718903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4709345-4709399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706826-4706860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4670478-4670571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4667799-4667925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4663348-4663446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663003-4663222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4662318-4662452:-1:exon

position:4662318:-1
position: 4662318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4662452:-1
position: 4662452
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:4661087-4661182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4660120-4660218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4625762-4626531:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4619981-4620110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4618445-4618550:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4617654-4617859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4614817-4614881:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4614670-4614744:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4614033-4614181:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4611877-4611991:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4609271-4609458:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4608387-4608528:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4591547-4591673:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4588427-4588597:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4586534-4587382:-1:exon

LOC123629096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629096
product: histone demethylase UTY, transcript variant X3
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539058.1
SIO_010081: LOC123629096
subclass of: SO_0000673
so part of: LOC123629096
location: complement(join(4586534..4587382,4588427..4588597,4591547..4591673,4608387..4608528,4609271..4609458,4611877..4611991,4614033..4614181,4614670..4614744,4614817..4614881,4617654..4617859,4618445..4618550,4619981..4620110,4625762..4626531,4659058..4659147,4659430..4659453,4660120..4660218,4661087..4661182,4662318..4662452,4663003..4663222,4663348..4663446,4667799..4667925,4670478..4670571,4706826..4706860,4709345..4709399,4718783..4718903,4722148..4722206,4748960..4749009,4767994..4768102,4779472..4779535,4779747..4780268))
location: region:4586534-4780268:-1
so has part: feature:4779747-4780268:-1:exon
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so has part: feature:4767994-4768102:-1:exon
so has part: feature:4748960-4749009:-1:exon
so has part: feature:4722148-4722206:-1:exon
so has part: feature:4718783-4718903:-1:exon
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so has part: feature:4619981-4620110:-1:exon
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so has part: feature:4617654-4617859:-1:exon
so has part: feature:4614817-4614881:-1:exon
so has part: feature:4614670-4614744:-1:exon
so has part: feature:4614033-4614181:-1:exon
so has part: feature:4611877-4611991:-1:exon
so has part: feature:4609271-4609458:-1:exon
so has part: feature:4608387-4608528:-1:exon
so has part: feature:4591547-4591673:-1:exon
so has part: feature:4588427-4588597:-1:exon
so has part: feature:4586534-4587382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4779747-4780268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779472-4779535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4767994-4768102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4748960-4749009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4722148-4722206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4718783-4718903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4709345-4709399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706826-4706860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4670478-4670571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4667799-4667925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4663348-4663446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663003-4663222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4662318-4662452:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4661087-4661182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4660120-4660218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4659430-4659453:-1:exon

position:4659430:-1
position: 4659430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:4659058-4659147:-1:exon

position:4659147:-1
position: 4659147
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:4625762-4626531:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4619981-4620110:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4618445-4618550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4617654-4617859:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4614817-4614881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4614670-4614744:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4614033-4614181:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4611877-4611991:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4609271-4609458:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4608387-4608528:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4591547-4591673:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4588427-4588597:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:4586534-4587382:-1:exon

LOC123629096
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 9447
gene: LOC123629096
product: histone demethylase UTY, transcript variant X1
experiment: COORDINATES: polyA evidence [ECO:0006239]
transcript id: XM_045539056.1
SIO_010081: LOC123629096
subclass of: SO_0000673
so part of: LOC123629096
location: complement(join(4586534..4587382,4588427..4588597,4591547..4591673,4608387..4608528,4609271..4609458,4611877..4611991,4614033..4614181,4614670..4614744,4614817..4614881,4617654..4617859,4618445..4618550,4619981..4620110,4625762..4626531,4659058..4659453,4660120..4660218,4661087..4661182,4662318..4662452,4663003..4663222,4663348..4663446,4667799..4667925,4670478..4670571,4706826..4706860,4709345..4709399,4718783..4718903,4722148..4722206,4748960..4749009,4767994..4768102,4779472..4779535,4779747..4780268))
location: region:4586534-4780268:-1
so has part: feature:4779747-4780268:-1:exon
so has part: feature:4779472-4779535:-1:exon
so has part: feature:4767994-4768102:-1:exon
so has part: feature:4748960-4749009:-1:exon
so has part: feature:4722148-4722206:-1:exon
so has part: feature:4718783-4718903:-1:exon
so has part: feature:4709345-4709399:-1:exon
so has part: feature:4706826-4706860:-1:exon
so has part: feature:4670478-4670571:-1:exon
so has part: feature:4667799-4667925:-1:exon
so has part: feature:4663348-4663446:-1:exon
so has part: feature:4663003-4663222:-1:exon
so has part: feature:4662318-4662452:-1:exon
so has part: feature:4661087-4661182:-1:exon
so has part: feature:4660120-4660218:-1:exon
so has part: feature:4659058-4659453:-1:exon
so has part: feature:4625762-4626531:-1:exon
so has part: feature:4619981-4620110:-1:exon
so has part: feature:4618445-4618550:-1:exon
so has part: feature:4617654-4617859:-1:exon
so has part: feature:4614817-4614881:-1:exon
so has part: feature:4614670-4614744:-1:exon
so has part: feature:4614033-4614181:-1:exon
so has part: feature:4611877-4611991:-1:exon
so has part: feature:4609271-4609458:-1:exon
so has part: feature:4608387-4608528:-1:exon
so has part: feature:4591547-4591673:-1:exon
so has part: feature:4588427-4588597:-1:exon
so has part: feature:4586534-4587382:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:4779747-4780268:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779472-4779535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4767994-4768102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4748960-4749009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4722148-4722206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4718783-4718903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4709345-4709399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706826-4706860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4670478-4670571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4667799-4667925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4663348-4663446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663003-4663222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4662318-4662452:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4661087-4661182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4660120-4660218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4659058-4659453:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4625762-4626531:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4619981-4620110:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4618445-4618550:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4617654-4617859:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4614817-4614881:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4614670-4614744:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4614033-4614181:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4611877-4611991:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4609271-4609458:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4608387-4608528:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4591547-4591673:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4588427-4588597:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:4586534-4587382:-1:exon

LOC123629096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X2
translation: MKSFGVSLATAAVDLSDEEKKMAARKASGEGDEGSPSLTAEEREVLGGLDSRLFGFVSFHEDGARTKTLLGKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEDYSKALSAYQRYYSLQADYWKNAAFLYGLGLVYFYYNAFHWAIKAFQDVLYVDPSFCRAKEIHLRLGLMFKVNTDYDSSLKHFQLALIDCNPCTLSSAEIQFHIAHLYETQRKYHSAKQAYEQLLQTENLPAQVKATVLQQLGWMHHNMDLVGDKATQESYAIQYLQKSLETDPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSILAARIKFLQNGSDNWNSSQTVSHHPVQQEVHSWCLTPQKLQHLEQLRANRDNLNPSQKLVLEQLESQFVLMQQQMRQKGFAQVQTAGIHNGPIADSSLPTNSLSGRQPHAALTRVPRVSQPGVHSTCLEKPLSKGPFSAGYIPCGTSQTLGSTDTILVGNNYVTESGSNGNVPYLQQNTLTLPHNHTNLTSSTEEPWRKQLSNSAQGLHKGQSSHLAGPNDEQPLFSTGTSQYHQAASTGIQNQNGRCTLPSNSLPQRDAVNHLSSHIATSGGQQGVTFTKESEPSRNRPLVPETSRHAGDTSNSCADVKRLSNHVHQVMADAVSSPNHGDSISPNLLFADNPQLSALLIGKANDNVGTGTCDKVNNIHPAIHTKTDNSVASSPSSAISTATPSPKSTEQISVTSLNSPHSGLHTINGEGLDNSQNSAKVDLPLLSHKSTPQIIPSMSVSIYPSSTEVLKTCRNLGKNGLSNSRILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWRCESNSSHTTIAKYAQYQASSFQESLREENEKRTQHKDHSDNESTSSDNSGRRRKGPFKTIKFGTNIDLSDNKKWKLQLHELTKLPAFVRVISAGNLLSHVGHTILGMNTVQLHMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQYKLAVERYEWNKLQSVKSVVPMIHLSWNIARNIKVSDPKLFEMIKYCLLKILKQCQTLKEALLSAGKEVVWHGRTNEEPAHYCSICEVEVFNLLFVSNESNIQKTYIVHCQDCARKTSGNLENFVVLEQYKMEDLMQVYDQFTLAPSLSTTSS
SIO_010081: LOC123629096
subclass of: SO_0000673
so part of: LOC123629096
location: complement(join(4587353..4587382,4588427..4588597,4591547..4591673,4608387..4608528,4609271..4609458,4611877..4611991,4614033..4614181,4614670..4614744,4614817..4614881,4617654..4617859,4618445..4618550,4619981..4620110,4625762..4626531,4659058..4659453,4660120..4660218,4661087..4661182,4663003..4663222,4663348..4663446,4667799..4667925,4670478..4670571,4706826..4706860,4709345..4709399,4718783..4718903,4722148..4722206,4748960..4749009,4767994..4768102,4779472..4779535,4779747..4779898))
location: region:4587353-4779898:-1
so has part: feature:4779747-4779898:-1:exon
so has part: feature:4779472-4779535:-1:exon
so has part: feature:4767994-4768102:-1:exon
so has part: feature:4748960-4749009:-1:exon
so has part: feature:4722148-4722206:-1:exon
so has part: feature:4718783-4718903:-1:exon
so has part: feature:4709345-4709399:-1:exon
so has part: feature:4706826-4706860:-1:exon
so has part: feature:4670478-4670571:-1:exon
so has part: feature:4667799-4667925:-1:exon
so has part: feature:4663348-4663446:-1:exon
so has part: feature:4663003-4663222:-1:exon
so has part: feature:4661087-4661182:-1:exon
so has part: feature:4660120-4660218:-1:exon
so has part: feature:4659058-4659453:-1:exon
so has part: feature:4625762-4626531:-1:exon
so has part: feature:4619981-4620110:-1:exon
so has part: feature:4618445-4618550:-1:exon
so has part: feature:4617654-4617859:-1:exon
so has part: feature:4614817-4614881:-1:exon
so has part: feature:4614670-4614744:-1:exon
so has part: feature:4614033-4614181:-1:exon
so has part: feature:4611877-4611991:-1:exon
so has part: feature:4609271-4609458:-1:exon
so has part: feature:4608387-4608528:-1:exon
so has part: feature:4591547-4591673:-1:exon
so has part: feature:4588427-4588597:-1:exon
so has part: feature:4587353-4587382:-1:exon

XP_045395013.1
type: Protein
SIO_000068: ncbiprotein

position:4587353:-1
position: 4587353
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:4779898:-1
position: 4779898
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:4779747-4779898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779472-4779535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4767994-4768102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4748960-4749009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4722148-4722206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4718783-4718903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4709345-4709399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706826-4706860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4670478-4670571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4667799-4667925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4663348-4663446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663003-4663222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4661087-4661182:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4660120-4660218:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4659058-4659453:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4625762-4626531:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4619981-4620110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4618445-4618550:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4617654-4617859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4614817-4614881:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4614670-4614744:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4614033-4614181:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4611877-4611991:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4609271-4609458:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4608387-4608528:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4591547-4591673:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4588427-4588597:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4587353-4587382:-1:exon

LOC123629096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X4
translation: MKSFGVSLATAAVDLSDEEKKMAARKASGEGDEGSPSLTAEEREVLGGLDSRLFGFVSFHEDGARTKTLLGKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEDYSKALSAYQRYYSLQADYWKNAAFLYGLGLVYFYYNAFHWAIKAFQDVLYVDPSFCRAKEIHLRLGLMFKVNTDYDSSLKHFQLALIDCNPCTLSSAEIQFHIAHLYETQRKYHSAKQAYEQLLQTENLPAQVKATVLQQLGWMHHNMDLVGDKATQESYAIQYLQKSLETDPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSILAARIKFLQAQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNGSDNWNSSQTVSHHPVQQEVHSWCLTPQKLQHLEQLRANRDNLNPSQKLVLEQLESQFVLMQQQGLHKGQSSHLAGPNDEQPLFSTGTSQYHQAASTGIQNQNGRCTLPSNSLPQRDAVNHLSSHIATSGGQQGVTFTKESEPSRNRPLVPETSRHAGDTSNSCADVKRLSNHVHQVMADAVSSPNHGDSISPNLLFADNPQLSALLIGKANDNVGTGTCDKVNNIHPAIHTKTDNSVASSPSSAISTATPSPKSTEQISVTSLNSPHSGLHTINGEGLDNSQNSAKVDLPLLSHKSTPQIIPSMSVSIYPSSTEVLKTCRNLGKNGLSNSRILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWRCESNSSHTTIAKYAQYQASSFQESLREENEKRTQHKDHSDNESTSSDNSGRRRKGPFKTIKFGTNIDLSDNKKWKLQLHELTKLPAFVRVISAGNLLSHVGHTILGMNTVQLHMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQYKLAVERYEWNKLQSVKSVVPMIHLSWNIARNIKVSDPKLFEMIKYCLLKILKQCQTLKEALLSAGKEVVWHGRTNEEPAHYCSICEVEVFNLLFVSNESNIQKTYIVHCQDCARKTSGNLENFVVLEQYKMEDLMQVYDQFTLAPSLSTTSS
SIO_010081: LOC123629096
subclass of: SO_0000673
so part of: LOC123629096
location: complement(join(4587353..4587382,4588427..4588597,4591547..4591673,4608387..4608528,4609271..4609458,4611877..4611991,4614033..4614181,4614670..4614744,4614817..4614881,4617654..4617859,4618445..4618550,4619981..4620110,4625762..4626531,4660120..4660218,4661087..4661182,4662318..4662452,4663003..4663222,4663348..4663446,4667799..4667925,4670478..4670571,4706826..4706860,4709345..4709399,4718783..4718903,4722148..4722206,4748960..4749009,4767994..4768102,4779472..4779535,4779747..4779898))
location: region:4587353-4779898:-1
so has part: feature:4779747-4779898:-1:exon
so has part: feature:4779472-4779535:-1:exon
so has part: feature:4767994-4768102:-1:exon
so has part: feature:4748960-4749009:-1:exon
so has part: feature:4722148-4722206:-1:exon
so has part: feature:4718783-4718903:-1:exon
so has part: feature:4709345-4709399:-1:exon
so has part: feature:4706826-4706860:-1:exon
so has part: feature:4670478-4670571:-1:exon
so has part: feature:4667799-4667925:-1:exon
so has part: feature:4663348-4663446:-1:exon
so has part: feature:4663003-4663222:-1:exon
so has part: feature:4662318-4662452:-1:exon
so has part: feature:4661087-4661182:-1:exon
so has part: feature:4660120-4660218:-1:exon
so has part: feature:4625762-4626531:-1:exon
so has part: feature:4619981-4620110:-1:exon
so has part: feature:4618445-4618550:-1:exon
so has part: feature:4617654-4617859:-1:exon
so has part: feature:4614817-4614881:-1:exon
so has part: feature:4614670-4614744:-1:exon
so has part: feature:4614033-4614181:-1:exon
so has part: feature:4611877-4611991:-1:exon
so has part: feature:4609271-4609458:-1:exon
so has part: feature:4608387-4608528:-1:exon
so has part: feature:4591547-4591673:-1:exon
so has part: feature:4588427-4588597:-1:exon
so has part: feature:4587353-4587382:-1:exon

XP_045395015.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4779747-4779898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779472-4779535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4767994-4768102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4748960-4749009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4722148-4722206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4718783-4718903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4709345-4709399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706826-4706860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4670478-4670571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4667799-4667925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4663348-4663446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663003-4663222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4662318-4662452:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4661087-4661182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4660120-4660218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4625762-4626531:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4619981-4620110:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4618445-4618550:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4617654-4617859:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4614817-4614881:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4614670-4614744:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4614033-4614181:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4611877-4611991:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4609271-4609458:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4608387-4608528:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4591547-4591673:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4588427-4588597:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:4587353-4587382:-1:exon

LOC123629096
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 9447
gene: LOC123629096
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone demethylase UTY isoform X3
translation: MKSFGVSLATAAVDLSDEEKKMAARKASGEGDEGSPSLTAEEREVLGGLDSRLFGFVSFHEDGARTKTLLGKAVRCYESLILKAEGKVESDFFCQLGHFNLLLEDYSKALSAYQRYYSLQADYWKNAAFLYGLGLVYFYYNAFHWAIKAFQDVLYVDPSFCRAKEIHLRLGLMFKVNTDYDSSLKHFQLALIDCNPCTLSSAEIQFHIAHLYETQRKYHSAKQAYEQLLQTENLPAQVKATVLQQLGWMHHNMDLVGDKATQESYAIQYLQKSLETDPNSGQSWYFLGRCYSSIGKVQDAFISYRQSIDKSEASADTWCSIGVLYQQQNQPMDALQAYICAVQLDHGHAAAWMDLGTLYESCNQPQDAIKCYLNATRSKSCSNTSILAARIKFLQAQLCNLPQGSLQNKTKLLPSIEEAWSLPIPAELTSRQGAMNTAQQNGSDNWNSSQTVSHHPVQQEVHSWCLTPQKLQHLEQLRANRDNLNPSQKLVLEQLESQFVLMQQQMRQKGFAQQNTLTLPHNHTNLTSSTEEPWRKQLSNSAQGLHKGQSSHLAGPNDEQPLFSTGTSQYHQAASTGIQNQNGRCTLPSNSLPQRDAVNHLSSHIATSGGQQGVTFTKESEPSRNRPLVPETSRHAGDTSNSCADVKRLSNHVHQVMADAVSSPNHGDSISPNLLFADNPQLSALLIGKANDNVGTGTCDKVNNIHPAIHTKTDNSVASSPSSAISTATPSPKSTEQISVTSLNSPHSGLHTINGEGLDNSQNSAKVDLPLLSHKSTPQIIPSMSVSIYPSSTEVLKTCRNLGKNGLSNSRILLDKCPPPRPPTSPYPPLPKDKLNPPTPSIYLENKRDAFFPPLHQFCTNPKNPVTVIRGLAGALKLDLGLFSTKTLVEANNEHMVEVRTQLLQPADENWDPTGTKKIWRCESNSSHTTIAKYAQYQASSFQESLREENEKRTQHKDHSDNESTSSDNSGRRRKGPFKTIKFGTNIDLSDNKKWKLQLHELTKLPAFVRVISAGNLLSHVGHTILGMNTVQLHMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEDYWGVLNDFCEKNNLNFLMSSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQYKLAVERYEWNKLQSVKSVVPMIHLSWNIARNIKVSDPKLFEMIKYCLLKILKQCQTLKEALLSAGKEVVWHGRTNEEPAHYCSICEVEVFNLLFVSNESNIQKTYIVHCQDCARKTSGNLENFVVLEQYKMEDLMQVYDQFTLAPSLSTTSS
SIO_010081: LOC123629096
subclass of: SO_0000673
so part of: LOC123629096
location: complement(join(4587353..4587382,4588427..4588597,4591547..4591673,4608387..4608528,4609271..4609458,4611877..4611991,4614033..4614181,4614670..4614744,4614817..4614881,4617654..4617859,4618445..4618550,4619981..4620110,4625762..4626531,4659058..4659147,4659430..4659453,4660120..4660218,4661087..4661182,4662318..4662452,4663003..4663222,4663348..4663446,4667799..4667925,4670478..4670571,4706826..4706860,4709345..4709399,4718783..4718903,4722148..4722206,4748960..4749009,4767994..4768102,4779472..4779535,4779747..4779898))
location: region:4587353-4779898:-1
so has part: feature:4779747-4779898:-1:exon
so has part: feature:4779472-4779535:-1:exon
so has part: feature:4767994-4768102:-1:exon
so has part: feature:4748960-4749009:-1:exon
so has part: feature:4722148-4722206:-1:exon
so has part: feature:4718783-4718903:-1:exon
so has part: feature:4709345-4709399:-1:exon
so has part: feature:4706826-4706860:-1:exon
so has part: feature:4670478-4670571:-1:exon
so has part: feature:4667799-4667925:-1:exon
so has part: feature:4663348-4663446:-1:exon
so has part: feature:4663003-4663222:-1:exon
so has part: feature:4662318-4662452:-1:exon
so has part: feature:4661087-4661182:-1:exon
so has part: feature:4660120-4660218:-1:exon
so has part: feature:4659430-4659453:-1:exon
so has part: feature:4659058-4659147:-1:exon
so has part: feature:4625762-4626531:-1:exon
so has part: feature:4619981-4620110:-1:exon
so has part: feature:4618445-4618550:-1:exon
so has part: feature:4617654-4617859:-1:exon
so has part: feature:4614817-4614881:-1:exon
so has part: feature:4614670-4614744:-1:exon
so has part: feature:4614033-4614181:-1:exon
so has part: feature:4611877-4611991:-1:exon
so has part: feature:4609271-4609458:-1:exon
so has part: feature:4608387-4608528:-1:exon
so has part: feature:4591547-4591673:-1:exon
so has part: feature:4588427-4588597:-1:exon
so has part: feature:4587353-4587382:-1:exon

XP_045395014.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:4779747-4779898:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:4779472-4779535:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:4767994-4768102:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:4748960-4749009:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:4722148-4722206:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:4718783-4718903:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:4709345-4709399:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:4706826-4706860:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:4670478-4670571:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:4667799-4667925:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:4663348-4663446:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:4663003-4663222:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:4662318-4662452:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:4661087-4661182:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:4660120-4660218:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:4659430-4659453:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:4659058-4659147:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:4625762-4626531:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:4619981-4620110:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:4618445-4618550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:4617654-4617859:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:4614817-4614881:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:4614670-4614744:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:4614033-4614181:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:4611877-4611991:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:4609271-4609458:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:4608387-4608528:-1:exon