Lemur catta isolate mLemCat1 chromosome 25, mLemCat1.pri, whole genome shotgun sequence.
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Lemuridae; Lemur.
REFSEQ INFORMATION: The reference sequence is identical to\nCM036496.1.\nAssembly name: mLemCat1.pri\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by the Vertebrate Genomes Project on\n2021/11/04. The original whole-genome shotgun project has the\naccession JAJGPY000000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: Vertebrate Genomes Project\nAssembly Date :: 16-JUL-2021\nAssembly Method :: hifiasm v. 0.12-r304; purge_dups v.\n 1.2.5; bionano_solve v.\n Solve3.6.1_11162020; salsa2 v. v2.2;\n gEVAL manual curation v. 2021-07-16\nAssembly Name :: mLemCat1.pri\nDiploid :: Principal Pseudohaplotype\nGenome Representation :: Full\nExpected Final Version :: No\nGenome Coverage :: 20.81x\nSequencing Technology :: Pacbio Sequel II CCS; 10X Genomics linked\n reads; Bionano Genomics DLS; Arima\n Genomics v1 Hi-C\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Lemur catta Annotation Release 100\nAnnotation Version :: 100\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 9.0\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##
Derived by automated computational analysis using gene prediction method: Gnomon.
uncharacterized LOC123627424, transcript variant X1
COORDINATES: polyA evidence [ECO:0006239]
uncharacterized LOC123627424, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
mitochondrial amidoxime reducing component 2, transcript variant X2
mitochondrial amidoxime reducing component 2, transcript variant X1
mitochondrial amidoxime reducing component 2
mitochondrial amidoxime reducing component 1
mitochondrial amidoxime-reducing component 1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123627491, transcript variant X2
uncharacterized LOC123627491, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 83% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
transfer RNA threonine (anticodon UGU); Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: HHIP-like protein 2
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X7
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X6
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X10
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X9
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X11
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X8
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X12
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X5
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X2
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X1
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X13
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X5
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X2
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X1
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X4
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X6
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X7
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
TATA-box binding protein associated factor, RNA polymerase I subunit A, transcript variant X3
TATA box-binding protein-associated factor RNA polymerase I subunit A isoform X3
dispatched RND transporter family member 1, transcript variant X7
dispatched RND transporter family member 1, transcript variant X6
dispatched RND transporter family member 1, transcript variant X5
dispatched RND transporter family member 1, transcript variant X11
dispatched RND transporter family member 1, transcript variant X1
dispatched RND transporter family member 1, transcript variant X4
dispatched RND transporter family member 1, transcript variant X3
dispatched RND transporter family member 1, transcript variant X8
dispatched RND transporter family member 1, transcript variant X9
dispatched RND transporter family member 1, transcript variant X10
dispatched RND transporter family member 1, transcript variant X2
dispatched RND transporter family member 1, transcript variant X12
BRO1 domain and CAAX motif containing, transcript variant X1
BRO1 domain and CAAX motif containing, transcript variant X3
BRO1 domain and CAAX motif containing, transcript variant X4
BRO1 domain and CAAX motif containing, transcript variant X5
BRO1 domain and CAAX motif containing, transcript variant X2
axin interactor, dorsalization associated
axin interactor, dorsalization-associated protein
MIA SH3 domain ER export factor 3, transcript variant X2
MIA SH3 domain ER export factor 3, transcript variant X1
MIA SH3 domain ER export factor 3, transcript variant X6
MIA SH3 domain ER export factor 3, transcript variant X7
MIA SH3 domain ER export factor 3, transcript variant X5
transport and Golgi organization protein 1 homolog isoform X1
transport and Golgi organization protein 1 homolog isoform X6
transport and Golgi organization protein 1 homolog isoform X2
transport and Golgi organization protein 1 homolog isoform X5
transport and Golgi organization protein 1 homolog isoform X7
MIA SH3 domain ER export factor 3, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 121 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transport and Golgi organization protein 1 homolog isoform X3
MIA SH3 domain ER export factor 3, transcript variant X4
transport and Golgi organization protein 1 homolog isoform X4
toll like receptor 5, transcript variant X5
toll like receptor 5, transcript variant X4
toll like receptor 5, transcript variant X3
toll like receptor 5, transcript variant X1
toll like receptor 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
coiled-coil domain-containing protein 185
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 61% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123627505, transcript variant X2
uncharacterized LOC123627505, transcript variant X1
uncharacterized protein LOC123627505 isoform X2
uncharacterized protein LOC123627505 isoform X1
tumor protein p53 binding protein 2, transcript variant X1
tumor protein p53 binding protein 2, transcript variant X2
apoptosis-stimulating of p53 protein 2 isoform X1
apoptosis-stimulating of p53 protein 2 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 128 ESTs, 7 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 99 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 62 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear valosin-containing protein-like isoform X2
nuclear valosin-containing protein-like isoform X1
nuclear valosin-containing protein-like isoform X3
cornichon family AMPA receptor auxiliary protein 4, transcript variant X1
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: nucleotide motif:Rfam:12.0:RF01210
cornichon family AMPA receptor auxiliary protein 4, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 102 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
WD repeat domain 26, transcript variant X1
WD repeat domain 26, transcript variant X2
WD repeat-containing protein 26 isoform X2
WD repeat-containing protein 26 isoform X1
uncharacterized LOC123627514, transcript variant X2
uncharacterized LOC123627514, transcript variant X1
cornichon family AMPA receptor auxiliary protein 3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 8 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123627517, transcript variant X1
uncharacterized LOC123627517, transcript variant X2
ENAH actin regulator, transcript variant X1
ENAH actin regulator, transcript variant X11
ENAH actin regulator, transcript variant X10
ENAH actin regulator, transcript variant X7
ENAH actin regulator, transcript variant X5
ENAH actin regulator, transcript variant X3
ENAH actin regulator, transcript variant X9
ENAH actin regulator, transcript variant X8
ENAH actin regulator, transcript variant X6
ENAH actin regulator, transcript variant X4
ENAH actin regulator, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 9% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized LOC123627525, transcript variant X1
uncharacterized LOC123627525, transcript variant X2
uncharacterized LOC123627526, transcript variant X1
uncharacterized LOC123627526, transcript variant X2
signal recognition particle 9, transcript variant X2
signal recognition particle 9, transcript variant X1
signal recognition particle 9 kDa protein isoform X1
signal recognition particle 9 kDa protein isoform X2
transmembrane protein 63A, transcript variant X6
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 ESTs, 11 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transmembrane protein 63A, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 66 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
transmembrane protein 63A, transcript variant X2
transmembrane protein 63A, transcript variant X1
transmembrane protein 63A, transcript variant X4
transmembrane protein 63A, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 62 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 15 Proteins, and 92% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 14 Proteins, and 94% coverage of the annotated genomic feature by RNAseq alignments
COORDINATES: nucleotide motif:Rfam:12.0:RF00026
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 27 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
replication stress response regulator SDE2
acyl-CoA binding domain containing 3, transcript variant X1
acyl-CoA binding domain containing 3, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins
uncharacterized LOC123627542, transcript variant X2
uncharacterized LOC123627542, transcript variant X3
uncharacterized LOC123627542, transcript variant X1
stum, mechanosensory transduction mediator homolog
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: protein stum homolog
inositol-trisphosphate 3-kinase B, transcript variant X1
inositol-trisphosphate 3-kinase B isoform X1
inositol-trisphosphate 3-kinase B, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol-trisphosphate 3-kinase B isoform X2
inositol-trisphosphate 3-kinase B, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol-trisphosphate 3-kinase B isoform X4
inositol-trisphosphate 3-kinase B, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 2 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
inositol-trisphosphate 3-kinase B isoform X3
CDC42 binding protein kinase alpha, transcript variant X4
CDC42 binding protein kinase alpha, transcript variant X2
CDC42 binding protein kinase alpha, transcript variant X1
CDC42 binding protein kinase alpha, transcript variant X5
CDC42 binding protein kinase alpha, transcript variant X3
CDC42 binding protein kinase alpha, transcript variant X6
serine/threonine-protein kinase MRCK alpha isoform X6
serine/threonine-protein kinase MRCK alpha isoform X4
serine/threonine-protein kinase MRCK alpha isoform X5
serine/threonine-protein kinase MRCK alpha isoform X2
serine/threonine-protein kinase MRCK alpha isoform X3
serine/threonine-protein kinase MRCK alpha isoform X1
CDC42 binding protein kinase alpha, transcript variant X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 60 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serine/threonine-protein kinase MRCK alpha isoform X7
AT-hook containing transcription factor 1, transcript variant X2
AT-hook containing transcription factor 1, transcript variant X3
AT-hook containing transcription factor 1, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 ESTs, 1 Protein, and 24% coverage of the annotated genomic feature by RNAseq alignments
saccharopine dehydrogenase-like oxidoreductase
consortin, connexin sorting protein, transcript variant X1
consortin, connexin sorting protein, transcript variant X2
transcription factor B2, mitochondrial, transcript variant X3
transcription factor B2, mitochondrial, transcript variant X1
transcription factor B2, mitochondrial, transcript variant X2
dimethyladenosine transferase 2, mitochondrial isoform X1
dimethyladenosine transferase 2, mitochondrial isoform X2
dimethyladenosine transferase 2, mitochondrial isoform X3
SET and MYND domain containing 3, transcript variant X1
SET and MYND domain containing 3, transcript variant X2
histone-lysine N-methyltransferase SMYD3 isoform X1
histone-lysine N-methyltransferase SMYD3 isoform X2
SET and MYND domain containing 3, transcript variant X3
SET and MYND domain containing 3, transcript variant X4
SET and MYND domain containing 3, transcript variant X5
histone-lysine N-methyltransferase SMYD3 isoform X3
SET and MYND domain containing 3, transcript variant X6
SET and MYND domain containing 3, transcript variant X7
SET and MYND domain containing 3, transcript variant X8
SET and MYND domain containing 3, transcript variant X10
SET and MYND domain containing 3, transcript variant X11
uncharacterized LOC123627548, transcript variant X2
uncharacterized LOC123627548, transcript variant X1
SET and MYND domain containing 3, transcript variant X9
histone-lysine N-methyltransferase SMYD3 isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments
EF-hand calcium binding domain 2, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
EF-hand calcium binding domain 2, transcript variant X2
EF-hand calcium binding domain 2, transcript variant X3
dynein regulatory complex protein 8 isoform X1
dynein regulatory complex protein 8 isoform X3
dynein regulatory complex protein 8 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
heterogeneous nuclear ribonucleoprotein U, transcript variant X1
heterogeneous nuclear ribonucleoprotein U, transcript variant X2
heterogeneous nuclear ribonucleoprotein U, transcript variant X3
heterogeneous nuclear ribonucleoprotein U isoform X1
heterogeneous nuclear ribonucleoprotein U isoform X2
cytochrome c oxidase assembly protein COX20, mitochondrial, transcript variant X5
cytochrome c oxidase assembly protein COX20, mitochondrial, transcript variant X2
cytochrome c oxidase assembly protein COX20, mitochondrial, transcript variant X3
cytochrome c oxidase assembly protein COX20, mitochondrial, transcript variant X1
cytochrome c oxidase assembly protein COX20, mitochondrial, transcript variant X4
cytochrome c oxidase assembly protein COX20, mitochondrial, transcript variant X6
cytochrome c oxidase assembly protein COX20, mitochondrial isoform X1
cytochrome c oxidase assembly protein COX20, mitochondrial isoform X2
desumoylating isopeptidase 2, transcript variant X1
desumoylating isopeptidase 2, transcript variant X2
catsper channel auxiliary subunit epsilon
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 74% coverage of the annotated genomic feature by RNAseq alignments
cation channel sperm-associated protein subunit epsilon
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 72 ESTs, 3 Proteins, and 67% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 90% coverage of the annotated genomic feature by RNAseq alignments
uncharacterized protein C1orf100 homolog
COORDINATES: nucleotide motif:Rfam:12.0:RF00324
zinc finger and BTB domain containing 18, transcript variant X2
zinc finger and BTB domain containing 18, transcript variant X1
zinc finger and BTB domain-containing protein 18
uncharacterized LOC123627561, transcript variant X2
uncharacterized LOC123627561, transcript variant X4
uncharacterized LOC123627561, transcript variant X3
uncharacterized LOC123627561, transcript variant X1
uncharacterized LOC123627561, transcript variant X5
AKT serine/threonine kinase 3, transcript variant X1
RAC-gamma serine/threonine-protein kinase isoform X1
AKT serine/threonine kinase 3, transcript variant X2
RAC-gamma serine/threonine-protein kinase isoform X2
SHH signaling and ciliogenesis regulator SDCCAG8, transcript variant X1
SHH signaling and ciliogenesis regulator SDCCAG8, transcript variant X4
serologically defined colon cancer antigen 8 isoform X1
serologically defined colon cancer antigen 8 isoform X4
SHH signaling and ciliogenesis regulator SDCCAG8, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 48 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serologically defined colon cancer antigen 8 isoform X3
SHH signaling and ciliogenesis regulator SDCCAG8, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 45 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
serologically defined colon cancer antigen 8 isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 31% coverage of the annotated genomic feature by RNAseq alignments
centrosomal protein 170, transcript variant X1
centrosomal protein 170, transcript variant X12
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 135 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
centrosomal protein 170, transcript variant X15
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 132 ESTs, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
centrosomal protein 170, transcript variant X9
centrosomal protein 170, transcript variant X6
centrosomal protein 170, transcript variant X3
centrosomal protein 170, transcript variant X4
centrosomal protein 170, transcript variant X5
centrosomal protein 170, transcript variant X2
centrosomal protein 170, transcript variant X10
centrosomal protein 170, transcript variant X11
centrosomal protein 170, transcript variant X13
centrosomal protein 170, transcript variant X14
centrosomal protein 170, transcript variant X7
centrosomal protein 170, transcript variant X8
centrosomal protein 170, transcript variant X16
centrosomal protein of 170 kDa isoform X6
centrosomal protein of 170 kDa isoform X9
centrosomal protein of 170 kDa isoform X1
centrosomal protein of 170 kDa isoform X2
centrosomal protein of 170 kDa isoform X3
centrosomal protein of 170 kDa isoform X4
centrosomal protein of 170 kDa isoform X5
centrosomal protein of 170 kDa isoform X16
centrosomal protein of 170 kDa isoform X7
centrosomal protein of 170 kDa isoform X8
centrosomal protein of 170 kDa isoform X10
centrosomal protein of 170 kDa isoform X11
centrosomal protein of 170 kDa isoform X13
centrosomal protein of 170 kDa isoform X14
centrosomal protein of 170 kDa isoform X12
centrosomal protein of 170 kDa isoform X15
phospholipase D family member 5, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 12 Proteins, and 19% coverage of the annotated genomic feature by RNAseq alignments
phospholipase D family member 5, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 5 Proteins, and 17% coverage of the annotated genomic feature by RNAseq alignments
microtubule associated protein 1 light chain 3 gamma, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
microtubule associated protein 1 light chain 3 gamma, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 2 Proteins, and 68% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
microtubule-associated proteins 1A/1B light chain 3C
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 60% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 3 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins, and 88% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
regulator of G protein signaling 7, transcript variant X3
regulator of G protein signaling 7, transcript variant X2
regulator of G protein signaling 7, transcript variant X4
regulator of G protein signaling 7, transcript variant X1
regulator of G-protein signaling 7 isoform X3
regulator of G-protein signaling 7 isoform X2
regulator of G-protein signaling 7 isoform X4
regulator of G-protein signaling 7 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 9 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; deleted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
egl-9 family hypoxia inducible factor 1, transcript variant X1
egl-9 family hypoxia inducible factor 1, transcript variant X2
translin associated factor X, transcript variant X1
translin associated factor X, transcript variant X2
translin-associated protein X isoform X1
translin-associated protein X isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 26 Proteins, and 87% coverage of the annotated genomic feature by RNAseq alignments
signal induced proliferation associated 1 like 2, transcript variant X3
signal induced proliferation associated 1 like 2, transcript variant X1
signal induced proliferation associated 1 like 2, transcript variant X2
signal-induced proliferation-associated 1-like protein 2 isoform X2
signal-induced proliferation-associated 1-like protein 2 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 10% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 3 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
nucleoside-triphosphatase, cancer-related, transcript variant X1
nucleoside-triphosphatase, cancer-related, transcript variant X2
nucleoside-triphosphatase, cancer-related, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 75 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nucleoside-triphosphatase, cancer-related, transcript variant X3
cancer-related nucleoside-triphosphatase
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 1 EST, 6 Proteins, and 29% coverage of the annotated genomic feature by RNAseq alignments
mitogen-activated protein kinase kinase kinase 21
potassium two pore domain channel subfamily K member 1
cytochrome c oxidase assembly factor 6 homolog, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
cytochrome c oxidase assembly factor 6 homolog isoform X1
cytochrome c oxidase assembly factor 6 homolog, transcript variant X4
cytochrome c oxidase assembly factor 6 homolog, transcript variant X2
cytochrome c oxidase assembly factor 6 homolog, transcript variant X5
cytochrome c oxidase assembly factor 6 homolog, transcript variant X3
cytochrome c oxidase assembly factor 6 homolog isoform X2
cytochrome c oxidase assembly factor 6 homolog isoform X3
TAR (HIV-1) RNA binding protein 1, transcript variant X1
probable methyltransferase TARBP1 isoform X1
TAR (HIV-1) RNA binding protein 1, transcript variant X2
probable methyltransferase TARBP1 isoform X2
TAR (HIV-1) RNA binding protein 1, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 42 ESTs, 1 Protein, and 91% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
probable methyltransferase TARBP1 isoform X3
interferon regulatory factor 2 binding protein 2, transcript variant X1
interferon regulatory factor 2 binding protein 2, transcript variant X2
interferon regulatory factor 2-binding protein 2 isoform X2
interferon regulatory factor 2-binding protein 2 isoform X1
uncharacterized LOC123627427, transcript variant X1
uncharacterized LOC123627427, transcript variant X2
uncharacterized LOC123627483, transcript variant X2
uncharacterized LOC123627483, transcript variant X1
uncharacterized LOC123627442, transcript variant X2
uncharacterized LOC123627442, transcript variant X1
translocase of outer mitochondrial membrane 20
mitochondrial import receptor subunit TOM20 homolog
COORDINATES: nucleotide motif:Rfam:12.0:RF00397
RNA binding motif protein 34, transcript variant X1
RNA binding motif protein 34, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 50 ESTs, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
AT-rich interaction domain 4B, transcript variant X2
AT-rich interaction domain 4B, transcript variant X1
AT-rich interactive domain-containing protein 4B isoform X2
AT-rich interactive domain-containing protein 4B isoform X1
AT-rich interaction domain 4B, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 197 ESTs, 4 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
AT-rich interactive domain-containing protein 4B isoform X3
AT-rich interaction domain 4B, transcript variant X4
AT-rich interactive domain-containing protein 4B isoform X4
AT-rich interaction domain 4B, transcript variant X5
AT-rich interactive domain-containing protein 4B isoform X5
COORDINATES: nucleotide motif:Rfam:12.0:RF00438
COORDINATES: nucleotide motif:Rfam:12.0:RF00015
geranylgeranyl diphosphate synthase 1, transcript variant X3
geranylgeranyl diphosphate synthase 1, transcript variant X2
geranylgeranyl pyrophosphate synthase isoform X2
geranylgeranyl diphosphate synthase 1, transcript variant X1
geranylgeranyl pyrophosphate synthase isoform X1
tubulin folding cofactor E, transcript variant X1
tubulin folding cofactor E, transcript variant X2
tubulin folding cofactor E, transcript variant X3
beta-1,3-N-acetylgalactosaminyltransferase 2
UDP-GalNAc:beta-1, 3-N-acetylgalactosaminyltransferase 2
G protein subunit gamma 4, transcript variant X3
G protein subunit gamma 4, transcript variant X1
G protein subunit gamma 4, transcript variant X2
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-4
lysosomal trafficking regulator, transcript variant X3
lysosomal trafficking regulator, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 96 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
lysosomal trafficking regulator, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 89 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
lysosomal trafficking regulator, transcript variant X4
lysosomal trafficking regulator, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 84 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
lysosomal-trafficking regulator isoform X5
lysosomal-trafficking regulator isoform X4
lysosomal-trafficking regulator isoform X3
lysosomal-trafficking regulator isoform X2
lysosomal-trafficking regulator isoform X1
endoplasmic reticulum oxidoreductase 1 beta, transcript variant X1
endoplasmic reticulum oxidoreductase 1 beta, transcript variant X2
endoplasmic reticulum oxidoreductase 1 beta, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 1 Protein, and 96% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
EDAR associated death domain, transcript variant X1
ectodysplasin-A receptor-associated adapter protein isoform X1
EDAR associated death domain, transcript variant X3
EDAR associated death domain, transcript variant X2
ectodysplasin-A receptor-associated adapter protein isoform X2
ectodysplasin-A receptor-associated adapter protein isoform X3
EDAR associated death domain, transcript variant X4
ectodysplasin-A receptor-associated adapter protein isoform X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 74% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins, and 37% coverage of the annotated genomic feature by RNAseq alignments
5-methyltetrahydrofolate-homocysteine methyltransferase, transcript variant X3
5-methyltetrahydrofolate-homocysteine methyltransferase, transcript variant X2
5-methyltetrahydrofolate-homocysteine methyltransferase, transcript variant X1
ryanodine receptor 2, transcript variant X5
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 29 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
ryanodine receptor 2, transcript variant X4
ryanodine receptor 2, transcript variant X1
ryanodine receptor 2, transcript variant X2
ryanodine receptor 2, transcript variant X3
COORDINATES: nucleotide motif:Rfam:12.0:RF00066
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 31 ESTs, 36 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
glyceronephosphate O-acyltransferase, transcript variant X1
glyceronephosphate O-acyltransferase, transcript variant X2
dihydroxyacetone phosphate acyltransferase isoform X2
dihydroxyacetone phosphate acyltransferase isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins
uncharacterized protein C1orf131 homolog
tripartite motif containing 67, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 2 Proteins, and 12% coverage of the annotated genomic feature by RNAseq alignments
tripartite motif containing 67, transcript variant X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 11% coverage of the annotated genomic feature by RNAseq alignments
tripartite motif-containing protein 67 isoform X2
tripartite motif-containing protein 67 isoform X1
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins
family with sequence similarity 89 member A
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs, 3 Proteins, and 85% coverage of the annotated genomic feature by RNAseq alignments, including 2 samples with support for all annotated introns
ARV1 homolog, fatty acid homeostasis modulator
tetratricopeptide repeat domain 13, transcript variant X1
tetratricopeptide repeat domain 13, transcript variant X2
tetratricopeptide repeat domain 13, transcript variant X3
tetratricopeptide repeat domain 13, transcript variant X4
tetratricopeptide repeat domain 13, transcript variant X5
tetratricopeptide repeat domain 13, transcript variant X6
tetratricopeptide repeat domain 13, transcript variant X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
tetratricopeptide repeat domain 13, transcript variant X7
tetratricopeptide repeat protein 13 isoform X1
tetratricopeptide repeat protein 13 isoform X2
tetratricopeptide repeat protein 13 isoform X3
tetratricopeptide repeat protein 13 isoform X4
tetratricopeptide repeat protein 13 isoform X5
tetratricopeptide repeat protein 13 isoform X6
tetratricopeptide repeat protein 13 isoform X7
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 50 Proteins
tetratricopeptide repeat domain 13, transcript variant X9
tetratricopeptide repeat protein 13 isoform X8
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 148 ESTs, 4 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized protein C1orf198 homolog
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 30% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 33% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 32% coverage of the annotated genomic feature by RNAseq alignments
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 2 bases in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
conserved oligomeric Golgi complex subunit 2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs, 4 Proteins, and 93% coverage of the annotated genomic feature by RNAseq alignments
piggyBac transposable element-derived protein 5
polypeptide N-acetylgalactosaminyltransferase 2
URB2 ribosome biogenesis homolog, transcript variant X1
URB2 ribosome biogenesis homolog, transcript variant X2
unhealthy ribosome biogenesis protein 2 homolog isoform X1
URB2 ribosome biogenesis homolog, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 25 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
unhealthy ribosome biogenesis protein 2 homolog isoform X2
URB2 ribosome biogenesis homolog, transcript variant X4
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
TATA-box binding protein associated factor 5 like, transcript variant X2
TATA-box binding protein associated factor 5 like, transcript variant X1
TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
ATP binding cassette subfamily B member 10, transcript variant X1
ATP-binding cassette sub-family B member 10, mitochondrial isoform X1
ATP binding cassette subfamily B member 10, transcript variant X2
ATP-binding cassette sub-family B member 10, mitochondrial isoform X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 270 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
nuclear pore complex protein Nup133 isoform X1
nuclear pore complex protein Nup133 isoform X2
nuclear pore complex protein Nup133 isoform X3
actin alpha 1, skeletal muscle, transcript variant X1
actin alpha 1, skeletal muscle, transcript variant X2
centriole, cilia and spindle associated protein
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 65% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
centriole, cilia and spindle-associated protein
RAB4A, member RAS oncogene family, transcript variant X1
RAB4A, member RAS oncogene family, transcript variant X2
RAB4A, member RAS oncogene family, transcript variant X4
RAB4A, member RAS oncogene family, transcript variant X3
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 15% coverage of the annotated genomic feature by RNAseq alignments
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins, and 42% coverage of the annotated genomic feature by RNAseq alignments
leucine-rich repeat-containing protein 37B-like
The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins
The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 2 bases in 2 codons; substituted 1 base at 1 genomic stop codon; Derived by automated computational analysis using gene prediction method: Gnomon.
LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 37B-like
uncharacterized LOC123627572, transcript variant X2
Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns
uncharacterized LOC123627572, transcript variant X7
uncharacterized LOC123627572, transcript variant X4
uncharacterized LOC123627572, transcript variant X9
uncharacterized LOC123627572, transcript variant X10
uncharacterized LOC123627572, transcript variant X6
uncharacterized LOC123627572, transcript variant X3
uncharacterized LOC123627572, transcript variant X1
uncharacterized LOC123627572, transcript variant X5
uncharacterized LOC123627572, transcript variant X8
COORDINATES: nucleotide motif:Rfam:12.0:RF01960
COORDINATES: nucleotide motif:Rfam:12.0:RF00002
COORDINATES: nucleotide motif:Rfam:12.0:RF02543
uncharacterized LOC123627573, transcript variant X1
uncharacterized LOC123627573, transcript variant X3
uncharacterized LOC123627573, transcript variant X2