Ignicoccus islandicus DSM 13165 chromosome, complete genome.
Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Ignicoccus.
Submitted (05-NOV-2013) Biosciences, Oak Ridge National Laboratory, 1 Bethel Valley Rd, Oak Ridge, TN 37830, USA
REFSEQ INFORMATION: The reference sequence is identical to\nCP006867.1.\nThe annotation was added by the NCBI Prokaryotic Genome Annotation\nPipeline (PGAP). Information about PGAP can be found here:\nhttps://www.ncbi.nlm.nih.gov/genome/annotation_prok/\n\n##Genome-Assembly-Data-START##\nAssembly Method :: CLCBio v. 5; Geneious v. 6; Velvet v.\n 1.2.03\nGenome Coverage :: 200x\nSequencing Technology :: Sanger dideoxy sequencing; 454; Illumina\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI RefSeq\nAnnotation Date :: 03/09/2023 01:31:19\nAnnotation Pipeline :: NCBI Prokaryotic Genome\n Annotation Pipeline (PGAP)\nAnnotation Method :: Best-placed reference protein\n set; GeneMarkS-2+\nAnnotation Software revision :: 6.4\nFeatures Annotated :: Gene; CDS; rRNA; tRNA; ncRNA\nGenes (total) :: 1,547\nCDSs (total) :: 1,496\nGenes (coding) :: 1,492\nCDSs (with protein) :: 1,492\nGenes (RNA) :: 51\nrRNAs :: 2, 1, 1 (5S, 16S, 23S)\ncomplete rRNAs :: 2, 1, 1 (5S, 16S, 23S)\ntRNAs :: 45\nncRNAs :: 2\nPseudo Genes (total) :: 4\nCDSs (without protein) :: 4\nPseudo Genes (ambiguous residues) :: 0 of 4\nPseudo Genes (frameshifted) :: 1 of 4\nPseudo Genes (incomplete) :: 3 of 4\nPseudo Genes (internal stop) :: 0 of 4\nCRISPR Arrays :: 15\n##Genome-Annotation-Data-END##\nCOMPLETENESS: full length.
COORDINATES: protein motif:HMM:NF001623.0
Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF014080.2
helix-turn-helix domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822070.1
COORDINATES: protein motif:HMM:NF017704.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839510.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123440.1
COORDINATES: protein motif:HMM:TIGR00233.1
GO:0004830 - tryptophan-tRNA ligase activity [Evidence IEA]
GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822043.1
COORDINATES: ab initio prediction:GeneMarkS-2+
Derived by automated computational analysis using gene prediction method: GeneMarkS-2+.
COORDINATES: protein motif:HMM:TIGR01575.1
GO:0008999 - peptide-alanine-alpha-N-acetyltransferase activity [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]; GO:0042254 - ribosome biogenesis [Evidence IEA]
ribosomal protein S18-alanine N-acetyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012123421.1
stress response translation initiation inhibitor YciH
COORDINATES: protein motif:HMM:NF024118.2
COORDINATES: protein motif:HMM:NF013411.2
COORDINATES: protein motif:HMM:NF000801.0
GO:0016891 - endoribonuclease activity, producing 5'-phosphomonoesters [Evidence IEA]
GO:0042779 - tRNA 3'-trailer cleavage [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839117.1
COORDINATES: protein motif:HMM:NF024747.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821450.1
GO:0004589 - dihydroorotate dehydrogenase (NADH) activity [Evidence IEA]; GO:0004152 - dihydroorotate dehydrogenase activity [Evidence IEA]
GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013224.2
Lrp/AsnC ligand binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998669.1
GO:0004055 - argininosuccinate synthase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]
GO:0006526 - arginine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01054.1
GO:0003678 - DNA helicase activity [Evidence IEA]; GO:0003916 - DNA topoisomerase activity [Evidence IEA]; GO:0003917 - DNA topoisomerase type I (single strand cut, ATP-independent) activity [Evidence IEA]
GO:0006265 - DNA topological change [Evidence IEA]
COORDINATES: protein motif:HMM:NF014029.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122972.1
COORDINATES: protein motif:HMM:NF013348.2
COORDINATES: protein motif:HMM:NF013989.2
GO:0008703 - 5-amino-6-(5-phosphoribosylamino)uracil reductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00290.1
COORDINATES: protein motif:HMM:NF015412.2
GO:0033735 - aspartate dehydrogenase activity [Evidence IEA]
GO:0009435 - NAD biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014084.2
COORDINATES: protein motif:HMM:TIGR00074.1
HypC/HybG/HupF family hydrogenase formation chaperone
COORDINATES: protein motif:HMM:NF012797.2
GO:0003723 - RNA binding [Evidence IEA]; GO:0008173 - RNA methyltransferase activity [Evidence IEA]
GO:0006396 - RNA processing [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998494.1
GO:0051920 - peroxiredoxin activity [Evidence IEA]; GO:0008379 - thioredoxin peroxidase activity [Evidence IEA]
GO:0098869 - cellular oxidant detoxification [Evidence IEA]
COORDINATES: protein motif:HMM:NF016164.2
COORDINATES: protein motif:HMM:TIGR00135.1
GO:0030956 - glutamyl-tRNA(Gln) amidotransferase complex [Evidence IEA]
GO:0050567 - glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity [Evidence IEA]
GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC
COORDINATES: similar to AA sequence:RefSeq:WP_011998436.1
COORDINATES: protein motif:HMM:NF015018.2
COORDINATES: protein motif:HMM:TIGR01920.1
GO:0004765 - shikimate kinase activity [Evidence IEA]
GO:0009423 - chorismate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014620.2
NifB/NifX family molybdenum-iron cluster-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_013130238.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027200.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]
GO:0003735 - structural constituent of ribosome [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123548.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123549.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123550.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865687.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865686.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839323.1
COORDINATES: protein motif:HMM:NF012780.2
COORDINATES: protein motif:HMM:NF015748.2
WecB/TagA/CpsF family glycosyltransferase
COORDINATES: protein motif:HMM:NF014826.2
COORDINATES: similar to AA sequence:RefSeq:WP_014027394.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123506.1
twin-arginine translocation signal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011822511.1
GO:0016151 - nickel cation binding [Evidence IEA]
nickel-dependent hydrogenase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_014025629.1
COORDINATES: protein motif:HMM:NF024581.2
COORDINATES: protein motif:HMM:NF014044.2
COORDINATES: protein motif:HMM:NF024635.2
COORDINATES: protein motif:HMM:NF013429.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998260.1
GO:0008829 - dCTP deaminase activity [Evidence IEA]
GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998632.1
COORDINATES: protein motif:HMM:NF001541.2
GO:0004151 - dihydroorotase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO:0044205 - 'de novo' UMP biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012738.2
COORDINATES: protein motif:HMM:NF012235.2
ATP-binding cassette domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865679.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839328.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143711.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123418.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123419.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822464.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026197.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026198.1
energy-coupling factor ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_011998357.1
methyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00230.1
GO:0000023 - maltose metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012512.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026891.1
Derived by automated computational analysis using gene prediction method: tRNAscan-SE.
COORDINATES: protein motif:HMM:NF024634.2
4Fe-4S dicluster domain-containing protein
COORDINATES: protein motif:HMM:NF012383.2
COORDINATES: protein motif:HMM:NF021562.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998629.1
4-hydroxyphenylacetate 3-hydroxylase family protein
COORDINATES: protein motif:HMM:NF025025.2
COORDINATES: protein motif:HMM:NF020933.2
DNA double-strand break repair nuclease NurA
COORDINATES: protein motif:HMM:NF014010.2
GO:0008324 - monoatomic cation transmembrane transporter activity [Evidence IEA]
GO:0006813 - potassium ion transport [Evidence IEA]
TrkA C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF025033.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998122.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
GO:0006099 - tricarboxylic acid cycle [Evidence IEA]
ADP-forming succinate--CoA ligase subunit beta
COORDINATES: similar to AA sequence:RefSeq:WP_010866156.1
GO:0003824 - catalytic activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998168.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839275.1
COORDINATES: protein motif:HMM:NF015418.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998184.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123337.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123338.1
COORDINATES: protein motif:HMM:NF006341.0
COORDINATES: similar to AA sequence:RefSeq:WP_013562665.1
GO:0008830 - dTDP-4-dehydrorhamnose 3,5-epimerase activity [Evidence IEA]
GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA]; GO:0009243 - O antigen biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123241.1
GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]; GO:0006568 - tryptophan metabolic process [Evidence IEA]
TrpB-like pyridoxal phosphate-dependent enzyme
COORDINATES: similar to AA sequence:RefSeq:WP_011998397.1
GO:0004827 - proline-tRNA ligase activity [Evidence IEA]
GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024258.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821259.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822671.1
GO:0004420 - hydroxymethylglutaryl-CoA reductase (NADPH) activity [Evidence IEA]
GO:0008299 - isoprenoid biosynthetic process [Evidence IEA]
hydroxymethylglutaryl-CoA reductase (NADPH)
COORDINATES: protein motif:HMM:NF014717.2
COORDINATES: similar to AA sequence:RefSeq:WP_013303889.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998339.1
3-isopropylmalate dehydratase small subunit
COORDINATES: protein motif:HMM:NF012376.2
COORDINATES: similar to AA sequence:RefSeq:WP_013304200.1
GO:0006526 - arginine biosynthetic process [Evidence IEA]; GO:0019878 - lysine biosynthetic process via aminoadipic acid [Evidence IEA]
alpha-aminoadipate/glutamate carrier protein LysW/ArgW
COORDINATES: similar to AA sequence:RefSeq:WP_012123543.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303507.1
COORDINATES: protein motif:HMM:TIGR00755.1
GO:0000179 - rRNA (adenine-N6,N6-)-dimethyltransferase activity [Evidence IEA]
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA
COORDINATES: similar to AA sequence:RefSeq:WP_011998675.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0008987 - quinolinate synthetase A activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998566.1
GO:0003963 - RNA-3'-phosphate cyclase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012697.2
COORDINATES: protein motif:HMM:NF015610.2
COORDINATES: protein motif:HMM:NF014099.2
COORDINATES: protein motif:HMM:NF021487.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122984.1
COORDINATES: protein motif:HMM:NF016341.2
GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0008193 - tRNA guanylyltransferase activity [Evidence IEA]
GO:0006400 - tRNA modification [Evidence IEA]
tRNA(His) guanylyltransferase Thg1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010866737.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123294.1
GO:0003677 - DNA binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998350.1
COORDINATES: protein motif:HMM:NF025952.2
COORDINATES: protein motif:HMM:NF024921.2
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009897 - external side of plasma membrane [Evidence IEA]; GO:0030288 - outer membrane-bounded periplasmic space [Evidence IEA]
GO:0015412 - ABC-type molybdate transporter activity [Evidence IEA]; GO:0030973 - molybdate ion binding [Evidence IEA]
GO:0015689 - molybdate ion transport [Evidence IEA]
molybdate ABC transporter substrate-binding protein
GO:0055085 - transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011822523.1
COORDINATES: protein motif:HMM:NF024247.2
COORDINATES: protein motif:HMM:NF012602.2
GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF015851.2
COORDINATES: protein motif:HMM:NF014560.2
GO:0050797 - thymidylate synthase (FAD) activity [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998398.1
GO:0042132 - fructose 1,6-bisphosphate 1-phosphatase activity [Evidence IEA]; GO:0004332 - fructose-bisphosphate aldolase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]
fructose-1,6-bisphosphate aldolase/phosphatase
COORDINATES: protein motif:HMM:NF013793.2
COORDINATES: protein motif:HMM:TIGR00089.1
tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))- methylthiotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012123315.1
NAD(P)-dependent glycerol-1-phosphate dehydrogenase
COORDINATES: protein motif:HMM:NF012472.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123468.1
COORDINATES: protein motif:HMM:NF012492.2
COORDINATES: protein motif:HMM:NF020733.2
GO:0003906 - DNA-(apurinic or apyrimidinic site) endonuclease activity [Evidence IEA]; GO:0016799 - hydrolase activity, hydrolyzing N-glycosyl compounds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123068.1
RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
COORDINATES: protein motif:HMM:NF014713.2
COORDINATES: protein motif:HMM:NF037785.2
COORDINATES: protein motif:HMM:NF024771.2
COORDINATES: protein motif:HMM:NF019604.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123179.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123160.1
GO:0004822 - isoleucine-tRNA ligase activity [Evidence IEA]
GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF024861.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123192.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026457.1
formate--phosphoribosylaminoimidazolecarboxamide ligase family protein
Lrp/AsnC family transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00324.1
GO:0000214 - tRNA-intron endonuclease complex [Evidence IEA]
GO:0000213 - tRNA-intron endonuclease activity [Evidence IEA]
GO:0006388 - tRNA splicing, via endonucleolytic cleavage and ligation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014736839.1
metal ABC transporter ATP-binding protein
COORDINATES: protein motif:HMM:NF015947.2
AbrB/MazE/SpoVT family DNA-binding domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013561695.1
GO:0008966 - phosphoglucosamine mutase activity [Evidence IEA]
GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA]; GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014025865.1
COORDINATES: protein motif:HMM:TIGR04084.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
GO:0046500 - S-adenosylmethionine metabolic process [Evidence IEA]
TIGR04084 family radical SAM/SPASM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821277.1
U6 snRNA-associated Sm-like protein LSm6
COORDINATES: similar to AA sequence:RefSeq:WP_011998194.1
COORDINATES: protein motif:HMM:NF016724.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016818 - hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA]
helicase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012441.2
GO:0004590 - orotidine-5'-phosphate decarboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012608887.1
COORDINATES: similar to AA sequence:RefSeq:WP_011839271.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866457.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123227.1
COORDINATES: protein motif:HMM:NF027889.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122939.1
COORDINATES: protein motif:HMM:NF018357.2
COORDINATES: protein motif:HMM:NF016358.2
COORDINATES: protein motif:HMM:NF012403.2
COORDINATES: similar to AA sequence:RefSeq:WP_013562576.1
GO:0004427 - inorganic diphosphate phosphatase activity [Evidence IEA]
GO:0006796 - phosphate-containing compound metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012795.2
COORDINATES: protein motif:HMM:NF014025.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123051.1
COORDINATES: protein motif:HMM:NF015846.2
COORDINATES: protein motif:HMM:NF013088.2
COORDINATES: protein motif:HMM:NF025776.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026494.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027444.1
GO:0009116 - nucleoside metabolic process [Evidence IEA]
phosphoribosyltransferase family protein
COORDINATES: protein motif:HMM:NF037270.2
COORDINATES: protein motif:HMM:NF013640.2
COORDINATES: protein motif:HMM:NF014774.2
heterodisulfide reductase-related iron-sulfur binding cluster
COORDINATES: protein motif:HMM:NF003210.0
phenylalanine--tRNA ligase subunit alpha
COORDINATES: protein motif:HMM:TIGR00471.1
GO:0009328 - phenylalanine-tRNA ligase complex [Evidence IEA]
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]
GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866651.1
COORDINATES: protein motif:HMM:NF014820.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302935.1
Zn-ribbon domain-containing OB-fold protein
COORDINATES: protein motif:HMM:NF016312.2
GO:0051499 - D-aminoacyl-tRNA deacylase activity [Evidence IEA]; GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: protein motif:HMM:NF012478.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821993.1
COORDINATES: protein motif:HMM:NF037269.2
methanogen output domain 1-containing protein
COORDINATES: protein motif:HMM:NF014912.2
GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013213.2
GO:0016788 - hydrolase activity, acting on ester bonds [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014027223.1
GO:0008168 - methyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998667.1
COORDINATES: similar to AA sequence:RefSeq:WP_011821587.1
COORDINATES: similar to AA sequence:RefSeq:WP_010867118.1
type II toxin-antitoxin system VapC family toxin
COORDINATES: protein motif:HMM:NF014439.2
COORDINATES: protein motif:HMM:NF013970.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302990.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303274.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123137.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATP hydrolysis activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012610.2
GO:0003700 - DNA-binding transcription factor activity [Evidence IEA]
GO:0006355 - regulation of DNA-templated transcription [Evidence IEA]
COORDINATES: protein motif:HMM:NF037920.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998390.1
GO:0016530 - metallochaperone activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0036211 - protein modification process [Evidence IEA]
hydrogenase nickel incorporation protein HypB
COORDINATES: protein motif:HMM:NF001862.0
GO:0004170 - dUTP diphosphatase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]
GO:0006226 - dUMP biosynthetic process [Evidence IEA]; GO:0046081 - dUTP catabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143508.1
GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015325.2
COORDINATES: protein motif:HMM:NF013347.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123063.1
COORDINATES: protein motif:HMM:NF021490.2
COORDINATES: protein motif:HMM:NF024601.2
COORDINATES: protein motif:HMM:NF016763.2
COORDINATES: protein motif:HMM:NF014923.2
COORDINATES: protein motif:HMM:NF015639.2
COORDINATES: protein motif:HMM:TIGR04013.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]
TIGR04013 family B12-binding domain/radical SAM domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998241.1
COORDINATES: protein motif:HMM:TIGR00975.1
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]; GO:0042301 - phosphate ion binding [Evidence IEA]
phosphate ABC transporter substrate-binding protein PstS
COORDINATES: protein motif:HMM:NF014910.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026984.1
GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
GO:0000105 - histidine biosynthetic process [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisF
COORDINATES: similar to AA sequence:RefSeq:WP_012123414.1
COORDINATES: protein motif:HMM:NF021421.2
COORDINATES: protein motif:HMM:NF013994.2
helix-turn-helix transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011998049.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]
Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB
COORDINATES: protein motif:HMM:NF023211.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123329.1
COORDINATES: protein motif:HMM:NF021006.2
COORDINATES: protein motif:HMM:NF013155.2
COORDINATES: protein motif:HMM:TIGR02580.1
GO:0003674 - molecular_function [Evidence IEA]
GO:0043571 - maintenance of CRISPR repeat elements [Evidence IEA]
type III-B CRISPR module RAMP protein Cmr4
COORDINATES: protein motif:HMM:NF021237.2
type III-B CRISPR module-associated protein Cmr5
COORDINATES: protein motif:HMM:TIGR01898.1
type III-B CRISPR module RAMP protein Cmr6
COORDINATES: protein motif:HMM:TIGR02577.1
type III-B CRISPR-associated protein Cas10/Cmr2
COORDINATES: protein motif:HMM:NF021560.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998679.1
GO:0043714 - (R)-citramalate synthase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016107.2
COORDINATES: protein motif:HMM:NF012345.2
aminodeoxychorismate/anthranilate synthase component II
COORDINATES: protein motif:HMM:NF012861.2
COORDINATES: similar to AA sequence:RefSeq:WP_014027239.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123088.1
aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:TIGR00024.1
COORDINATES: similar to AA sequence:RefSeq:WP_012122999.1
His/Gly/Thr/Pro-type tRNA ligase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF014706.2
COORDINATES: protein motif:HMM:NF024498.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123556.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0004644 - phosphoribosylglycinamide formyltransferase activity [Evidence IEA]
GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
formate-dependent phosphoribosylglycinamide formyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011998165.1
tRNA(Met) cytidine acetyltransferase TmcA
COORDINATES: protein motif:HMM:NF028455.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123394.1
COORDINATES: protein motif:HMM:NF024214.2
NTP transferase domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123105.1
GO:0004160 - dihydroxy-acid dehydratase activity [Evidence IEA]
GO:0009097 - isoleucine biosynthetic process [Evidence IEA]; GO:0009099 - valine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014767981.1
COORDINATES: protein motif:HMM:NF016030.2
COORDINATES: protein motif:HMM:NF017017.2
GO:0003933 - GTP cyclohydrolase activity [Evidence IEA]
GO:0009058 - biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF014081.2
GO:0016787 - hydrolase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF021370.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123442.1
COORDINATES: protein motif:HMM:NF019310.2
GO:0022857 - transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012652.2
type II/IV secretion system ATPase subunit
COORDINATES: protein motif:HMM:NF012694.2
type II secretion system F family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123142.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998142.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0009898 - cytoplasmic side of plasma membrane [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter ATP-binding protein PstB
COORDINATES: protein motif:HMM:TIGR02138.1
GO:0055052 - ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0015415 - ATPase-coupled phosphate ion transmembrane transporter activity [Evidence IEA]
phosphate ABC transporter permease subunit PstC
COORDINATES: similar to AA sequence:RefSeq:WP_011822056.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303638.1
COORDINATES: protein motif:HMM:NF014002.2
COORDINATES: protein motif:HMM:NF013540.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123533.1
lipopolysaccharide kinase InaA family protein
COORDINATES: protein motif:HMM:TIGR00507.1
GO:0004764 - shikimate 3-dehydrogenase (NADP+) activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866825.1
COORDINATES: protein motif:HMM:NF014062.2
COORDINATES: protein motif:HMM:NF012566.2
GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF005012.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0048038 - quinone binding [Evidence IEA]
NADH-quinone oxidoreductase subunit NuoB
COORDINATES: protein motif:HMM:NF012717.2
COORDINATES: protein motif:HMM:TIGR01972.1
GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01974.1
GO:0050136 - NADH dehydrogenase (quinone) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF039907.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998256.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142470.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026286.1
COORDINATES: protein motif:HMM:NF014636.2
COORDINATES: similar to AA sequence:RefSeq:WP_013562270.1
GO:0016881 - acid-amino acid ligase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]
COORDINATES: nucleotide motif:Rfam:14.4:RF02540
Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: protein motif:HMM:TIGR00259.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123247.1
COORDINATES: protein motif:HMM:NF012592.2
COORDINATES: protein motif:HMM:NF024585.2
COORDINATES: protein motif:HMM:NF012361.2
GO:0004812 - aminoacyl-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014589.2
carbamoyltransferase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF013481.2
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016625 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor [Evidence IEA]
aldehyde ferredoxin oxidoreductase N-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123073.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998762.1
GO:0003942 - N-acetyl-gamma-glutamyl-phosphate reductase activity [Evidence IEA]
GO:0006592 - ornithine biosynthetic process [Evidence IEA]
N-acetyl-gamma-glutamyl-phosphate reductase
COORDINATES: protein motif:HMM:NF012655.2
TetR/AcrR family transcriptional regulator
COORDINATES: similar to AA sequence:RefSeq:WP_011822408.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562717.1
GO:0046523 - S-methyl-5-thioribose-1-phosphate isomerase activity [Evidence IEA]
GO:0019509 - L-methionine salvage from methylthioadenosine [Evidence IEA]
S-methyl-5-thioribose-1-phosphate isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014026624.1
GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
AmmeMemoRadiSam system radical SAM enzyme
COORDINATES: protein motif:HMM:NF012791.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123385.1
COORDINATES: protein motif:HMM:TIGR01980.1
GO:0005198 - structural molecule activity [Evidence IEA]
GO:0016226 - iron-sulfur cluster assembly [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123359.1
COORDINATES: protein motif:HMM:NF014677.2
COORDINATES: protein motif:HMM:TIGR00266.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865716.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123576.1
GO:0003849 - 3-deoxy-7-phosphoheptulonate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998622.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998623.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998624.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998625.1
GO:0022625 - cytosolic large ribosomal subunit [Evidence IEA]; GO:0000315 - organellar large ribosomal subunit [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143722.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998341.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143468.1
COORDINATES: protein motif:HMM:NF014670.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302764.1
GO:0004044 - amidophosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123108.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123109.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865584.1
COORDINATES: protein motif:HMM:TIGR00021.1
GO:0004751 - ribose-5-phosphate isomerase activity [Evidence IEA]
GO:0006098 - pentose-phosphate shunt [Evidence IEA]
COORDINATES: protein motif:HMM:NF016984.2
COORDINATES: similar to AA sequence:RefSeq:WP_014767291.1
GO:0004642 - phosphoribosylformylglycinamidine synthase activity [Evidence IEA]
phosphoribosylformylglycinamidine synthase subunit PurL
COORDINATES: similar to AA sequence:RefSeq:WP_011822106.1
COORDINATES: nucleotide motif:Rfam:14.4:RF00001
COORDINATES: protein motif:HMM:NF021607.2
COORDINATES: protein motif:HMM:NF012711.2
COORDINATES: protein motif:HMM:NF012686.2
COORDINATES: protein motif:HMM:NF013707.2
indolepyruvate oxidoreductase subunit beta
COORDINATES: protein motif:HMM:TIGR03336.1
GO:0043805 - indolepyruvate ferredoxin oxidoreductase activity [Evidence IEA]
indolepyruvate ferredoxin oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012122934.1
GO:0016853 - isomerase activity [Evidence IEA]
GO:1901135 - carbohydrate derivative metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123233.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838548.1
COORDINATES: protein motif:HMM:NF013226.2
geranylgeranylglycerol-phosphate geranylgeranyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014737824.1
COORDINATES: protein motif:HMM:TIGR01596.1
GO:0004521 - endoribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01587.1
GO:0004386 - helicase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR02583.1
type I-A CRISPR-associated protein Cas7/Csa2
COORDINATES: protein motif:HMM:NF021238.2
COORDINATES: protein motif:HMM:NF015728.2
RAMP superfamily CRISPR-associated protein
COORDINATES: protein motif:HMM:NF014017.2
COORDINATES: protein motif:HMM:NF018288.2
GO:0004347 - glucose-6-phosphate isomerase activity [Evidence IEA]
GO:0006094 - gluconeogenesis [Evidence IEA]; GO:0006096 - glycolytic process [Evidence IEA]
glucose-6-phosphate isomerase family protein
COORDINATES: protein motif:HMM:TIGR00040.1
COORDINATES: protein motif:HMM:NF014041.2
COORDINATES: protein motif:HMM:NF015545.2
COORDINATES: protein motif:HMM:NF039815.1
COORDINATES: similar to AA sequence:RefSeq:WP_013143129.1
cyclic pyranopterin monophosphate synthase MoaC
COORDINATES: protein motif:HMM:NF013219.2
iron chelate uptake ABC transporter family permease subunit
COORDINATES: protein motif:HMM:NF013648.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122950.1
GO:0004452 - isopentenyl-diphosphate delta-isomerase activity [Evidence IEA]
type 2 isopentenyl-diphosphate Delta-isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_011821927.1
GO:0016530 - metallochaperone activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839207.1
tRNA (cytidine(56)-2'-O)-methyltransferase
COORDINATES: protein motif:HMM:NF014102.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822290.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998525.1
hydrogenase expression/formation protein HypE
COORDINATES: protein motif:HMM:NF012766.2
COORDINATES: protein motif:HMM:NF016244.2
COORDINATES: protein motif:HMM:NF002288.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0004413 - homoserine kinase activity [Evidence IEA]
GO:0006566 - threonine metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016048.2
COORDINATES: protein motif:HMM:NF014094.2
COORDINATES: protein motif:HMM:NF028309.2
V-type ATPase subunit subunit G family protein
COORDINATES: protein motif:HMM:NF012515.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998076.1
GO:0004013 - adenosylhomocysteinase activity [Evidence IEA]
GO:0006730 - one-carbon metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998075.1
GO:0003690 - double-stranded DNA binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF003108.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866794.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303693.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998433.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866503.1
GO:0009345 - glycine-tRNA ligase complex [Evidence IEA]
GO:0004820 - glycine-tRNA ligase activity [Evidence IEA]
GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF014032.2
GO:0048500 - signal recognition particle [Evidence IEA]
GO:0008312 - 7S RNA binding [Evidence IEA]
GO:0006614 - SRP-dependent cotranslational protein targeting to membrane [Evidence IEA]
signal recognition particle subunit SRP19/SEC65 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_010865975.1
GO:0022627 - cytosolic small ribosomal subunit [Evidence IEA]; GO:0000314 - organellar small ribosomal subunit [Evidence IEA]
COORDINATES: protein motif:HMM:NF014046.2
COORDINATES: protein motif:HMM:NF024605.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123018.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998519.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142646.1
GO:0009349 - riboflavin synthase complex [Evidence IEA]
GO:0000906 - 6,7-dimethyl-8-ribityllumazine synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012234.2
COORDINATES: protein motif:HMM:NF014494.2
COORDINATES: protein motif:HMM:NF012488.2
alanine--glyoxylate aminotransferase family protein
COORDINATES: protein motif:HMM:NF014003.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302541.1
GO:0000309 - nicotinamide-nucleotide adenylyltransferase activity [Evidence IEA]
nicotinamide-nucleotide adenylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012123093.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123094.1
COORDINATES: protein motif:HMM:NF005050.0
GO:0003676 - nucleic acid binding [Evidence IEA]
OB-fold nucleic acid binding domain-containing protein
COORDINATES: protein motif:HMM:NF039482.1
COORDINATES: protein motif:HMM:NF017944.2
CbiX/SirB N-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF015557.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123132.1
COORDINATES: protein motif:HMM:NF015983.2
COORDINATES: nucleotide motif:Rfam:14.4:RF01959
COORDINATES: protein motif:HMM:NF006358.0
anaerobic ribonucleoside triphosphate reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011998074.1
ribosome biogenesis/translation initiation ATPase RLI
COORDINATES: protein motif:HMM:NF013013.2
GO:0004399 - histidinol dehydrogenase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014448.2
GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA]
molybdenum cofactor biosynthesis protein MoaE
COORDINATES: similar to AA sequence:RefSeq:WP_012123170.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123464.1
COORDINATES: protein motif:HMM:NF014433.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998069.1
COORDINATES: protein motif:HMM:NF014443.2
GO:0006812 - monoatomic cation transport [Evidence IEA]; GO:0055085 - transmembrane transport [Evidence IEA]
GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011838440.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998224.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998223.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998222.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998221.1
COORDINATES: similar to AA sequence:RefSeq:WP_012609029.1
COORDINATES: protein motif:HMM:NF001988.0
COORDINATES: similar to AA sequence:RefSeq:WP_011998218.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866565.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302689.1
COORDINATES: similar to AA sequence:RefSeq:WP_014768186.1
GO:0016462 - pyrophosphatase activity [Evidence IEA]
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
COORDINATES: protein motif:HMM:TIGR03724.2
COORDINATES: protein motif:HMM:NF013168.2
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
COORDINATES: similar to AA sequence:RefSeq:WP_014026506.1
GO:0006325 - chromatin organization [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01208.1
GO:0008879 - glucose-1-phosphate thymidylyltransferase activity [Evidence IEA]
GO:0000271 - polysaccharide biosynthetic process [Evidence IEA]
glucose-1-phosphate thymidylyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012123269.1
COORDINATES: protein motif:HMM:NF003095.0
COORDINATES: similar to AA sequence:RefSeq:WP_011839382.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123321.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303870.1
COORDINATES: protein motif:HMM:TIGR00327.1
GO:0006886 - intracellular protein transport [Evidence IEA]
protein translocase SEC61 complex subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_012123318.1
GO:0003924 - GTPase activity [Evidence IEA]; GO:0005047 - signal recognition particle binding [Evidence IEA]
GO:0009306 - protein secretion [Evidence IEA]
signal recognition particle-docking protein FtsY
COORDINATES: protein motif:HMM:TIGR00293.1
GO:0005515 - protein binding [Evidence IEA]
GO:0006457 - protein folding [Evidence IEA]
COORDINATES: protein motif:HMM:NF013900.2
COORDINATES: protein motif:HMM:NF021368.2
COORDINATES: protein motif:HMM:NF013366.2
GO:0046983 - protein dimerization activity [Evidence IEA]
GO:0006351 - DNA-templated transcription [Evidence IEA]
RpoL/Rpb11 RNA polymerase subunit family protein
COORDINATES: protein motif:HMM:NF034126.3
exosome complex RNA-binding protein Csl4
COORDINATES: protein motif:HMM:TIGR02751.1
GO:0008964 - phosphoenolpyruvate carboxylase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998369.1
GO:0009320 - phosphoribosylaminoimidazole carboxylase complex [Evidence IEA]
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity [Evidence IEA]
5-(carboxyamino)imidazole ribonucleotide mutase
COORDINATES: protein motif:HMM:TIGR00449.1
COORDINATES: protein motif:HMM:NF024116.2
COORDINATES: protein motif:HMM:TIGR01470.1
bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase
COORDINATES: protein motif:HMM:NF013117.2
COORDINATES: protein motif:HMM:NF014325.2
COORDINATES: protein motif:HMM:NF012521.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821225.1
functions along with aFIB and aL7a; guides 2'-O-methylation of ribose to specific sites in RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011821676.1
COORDINATES: protein motif:HMM:NF015971.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123014.1
COORDINATES: protein motif:HMM:NF018242.2
COORDINATES: protein motif:HMM:NF012933.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123009.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123006.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123005.1
PLP-dependent aminotransferase family protein
COORDINATES: protein motif:HMM:NF037142.2
COORDINATES: protein motif:HMM:NF013143.2
GO:0043190 - ATP-binding cassette (ABC) transporter complex [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IEA]
GO:0042626 - ATPase-coupled transmembrane transporter activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013465.2
GO:0046872 - metal ion binding [Evidence IEA]
zinc ABC transporter substrate-binding protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123059.1
COORDINATES: protein motif:HMM:NF013097.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998383.1
twin-arginine translocase TatA/TatE family subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011838466.1
COORDINATES: protein motif:HMM:TIGR00421.1
GO:0016831 - carboxy-lyase activity [Evidence IEA]
GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123291.1
GO:0003746 - translation elongation factor activity [Evidence IEA]
GO:0006414 - translational elongation [Evidence IEA]
translation elongation factor EF-1 subunit alpha
COORDINATES: protein motif:HMM:TIGR00318.1
COORDINATES: similar to AA sequence:RefSeq:WP_010867036.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822502.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998064.1
aldehyde ferredoxin oxidoreductase family protein
COORDINATES: protein motif:HMM:TIGR03684.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866269.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822281.1
GO:0008150 - biological_process [Evidence IEA]
secondary thiamine-phosphate synthase enzyme YjbQ
COORDINATES: protein motif:HMM:NF013887.2
3-dehydroquinate synthase family protein
COORDINATES: protein motif:HMM:NF019911.2
COORDINATES: protein motif:HMM:NF017200.2
COORDINATES: protein motif:HMM:NF012373.2
COORDINATES: protein motif:HMM:NF012709.2
COORDINATES: protein motif:HMM:NF012636.2
COORDINATES: protein motif:HMM:NF012581.2
proton-conducting transporter membrane subunit
COORDINATES: nucleotide motif:Rfam:14.4:RF01857
archaeal-type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_011998234.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0051536 - iron-sulfur cluster binding [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00657.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303890.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123075.1
3-isopropylmalate dehydratase large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013302948.1
COORDINATES: protein motif:HMM:TIGR00521.1
GO:0004632 - phosphopantothenate--cysteine ligase activity [Evidence IEA]; GO:0004633 - phosphopantothenoylcysteine decarboxylase activity [Evidence IEA]
GO:0015937 - coenzyme A biosynthetic process [Evidence IEA]; GO:0015939 - pantothenate metabolic process [Evidence IEA]
bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC
COORDINATES: similar to AA sequence:RefSeq:WP_012123486.1
COORDINATES: protein motif:HMM:NF014342.2
COORDINATES: protein motif:HMM:NF014088.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123104.1
COORDINATES: protein motif:HMM:NF012900.2
COORDINATES: protein motif:HMM:NF012544.2
COORDINATES: similar to AA sequence:RefSeq:WP_013143814.1
COORDINATES: protein motif:HMM:NF013183.2
MogA/MoaB family molybdenum cofactor biosynthesis protein
COORDINATES: protein motif:HMM:NF021347.2
COORDINATES: protein motif:HMM:TIGR03156.1
COORDINATES: protein motif:HMM:NF018696.2
COORDINATES: protein motif:HMM:NF016382.2
COORDINATES: protein motif:HMM:NF012955.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123228.1
COORDINATES: protein motif:HMM:NF020327.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123144.1
type II glyceraldehyde-3-phosphate dehydrogenase
COORDINATES: protein motif:HMM:TIGR00437.1
GO:0015093 - ferrous iron transmembrane transporter activity [Evidence IEA]
GO:0006826 - iron ion transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF015965.2
COORDINATES: protein motif:HMM:NF014087.2
COORDINATES: protein motif:HMM:TIGR00308.1
GO:0004809 - tRNA (guanine-N2-)-methyltransferase activity [Evidence IEA]
GO:0030488 - tRNA methylation [Evidence IEA]
tRNA (guanine(10)-N(2))-dimethyltransferase
COORDINATES: protein motif:HMM:NF015631.2
COORDINATES: similar to AA sequence:RefSeq:WP_013143653.1
translation initiation factor IF-2 subunit beta
COORDINATES: protein motif:HMM:NF012670.2
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123405.1
class I SAM-dependent rRNA methyltransferase
COORDINATES: protein motif:HMM:NF014867.2
COORDINATES: protein motif:HMM:NF014244.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123401.1
COORDINATES: protein motif:HMM:NF013322.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
GO:0001522 - pseudouridine synthesis [Evidence IEA]; GO:0009451 - RNA modification [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123399.1
GO:0019164 - pyruvate synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026255.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303597.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123396.1
pyruvate ferredoxin oxidoreductase subunit gamma
COORDINATES: protein motif:HMM:TIGR01382.1
type 1 glutamine amidotransferase domain-containing protein
COORDINATES: protein motif:HMM:NF013146.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998328.1
COORDINATES: protein motif:HMM:NF012311.2
GO:0008236 - serine-type peptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00501.1
COORDINATES: similar to AA sequence:RefSeq:WP_014767931.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142645.1
GO:0004746 - riboflavin synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014027486.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998709.1
COORDINATES: similar to AA sequence:RefSeq:WP_010865598.1
GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA]
pyridoxal 5'-phosphate synthase glutaminase subunit PdxT
COORDINATES: protein motif:HMM:TIGR00467.1
GO:0017101 - aminoacyl-tRNA synthetase multienzyme complex [Evidence IEA]
GO:0004824 - lysine-tRNA ligase activity [Evidence IEA]
GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF025881.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122954.1
COORDINATES: protein motif:HMM:TIGR01482.1
GO:0008967 - phosphoglycolate phosphatase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013303853.1
GO:0004070 - aspartate carbamoyltransferase activity [Evidence IEA]
GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013142555.1
aspartate carbamoyltransferase regulatory subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013128916.1
COORDINATES: similar to AA sequence:RefSeq:WP_012122996.1
GO:0008664 - 2'-5'-RNA ligase activity [Evidence IEA]
GO:0008033 - tRNA processing [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR03671.1
COORDINATES: similar to AA sequence:RefSeq:WP_012122992.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302762.1
phosphoribosylformylglycinamidine synthase I
COORDINATES: similar to AA sequence:RefSeq:WP_012122990.1
phosphoribosylformylglycinamidine synthase subunit PurS
COORDINATES: protein motif:HMM:NF006868.0
GO:0004639 - phosphoribosylaminoimidazolesuccinocarboxamide synthase activity [Evidence IEA]
GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA]
phosphoribosylaminoimidazolesuccinocarboxamide synthase
COORDINATES: protein motif:HMM:NF016765.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822133.1
DNA repair and recombination protein RadA
COORDINATES: protein motif:HMM:TIGR00395.1
GO:0004823 - leucine-tRNA ligase activity [Evidence IEA]
GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013562761.1
COORDINATES: protein motif:HMM:NF013450.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866184.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998302.1
GO:0061711 - N(6)-L-threonylcarbamoyladenine synthase activity [Evidence IEA]
KEOPS complex N(6)-L-threonylcarbamoyladenine synthase Kae1
COORDINATES: similar to AA sequence:RefSeq:WP_011998596.1
GO:0004635 - phosphoribosyl-AMP cyclohydrolase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014025703.1
GO:0047294 - phosphoglycerol geranylgeranyltransferase activity [Evidence IEA]
GO:0006650 - glycerophospholipid metabolic process [Evidence IEA]
geranylgeranylglyceryl/heptaprenylglyceryl phosphate synthase
COORDINATES: protein motif:HMM:NF012382.2
COORDINATES: protein motif:HMM:NF013234.2
COORDINATES: protein motif:HMM:NF013362.2
COORDINATES: protein motif:HMM:NF013777.2
COORDINATES: protein motif:HMM:NF024968.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998671.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822522.1
molybdopterin oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998131.1
COORDINATES: protein motif:HMM:NF019846.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998567.1
ATP-dependent Clp protease proteolytic subunit
COORDINATES: similar to AA sequence:RefSeq:WP_011998192.1
pyridoxal 5'-phosphate synthase lyase subunit PdxS
COORDINATES: protein motif:HMM:NF017633.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998435.1
GO:0004018 - N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF024988.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998139.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998297.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123296.1
GO:0004825 - methionine-tRNA ligase activity [Evidence IEA]
GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839556.1
GO:0004634 - phosphopyruvate hydratase activity [Evidence IEA]
GO:0006096 - glycolytic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012608009.1
GO:0003864 - 3-methyl-2-oxobutanoate hydroxymethyltransferase activity [Evidence IEA]
GO:0015940 - pantothenate biosynthetic process [Evidence IEA]
3-methyl-2-oxobutanoate hydroxymethyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_014027298.1
GO:0003998 - acylphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF012497.2
GO:0003866 - 3-phosphoshikimate 1-carboxyvinyltransferase activity [Evidence IEA]
3-phosphoshikimate 1-carboxyvinyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_013142746.1
COORDINATES: protein motif:HMM:NF013835.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998510.1
phenylacetate--CoA ligase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012122958.1
COORDINATES: protein motif:HMM:NF012365.2
produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:TIGR00309.1
GO:0016471 - vacuolar proton-transporting V-type ATPase complex [Evidence IEA]
GO:0008553 - P-type proton-exporting transporter activity [Evidence IEA]
GO:1902600 - proton transmembrane transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865715.1
COORDINATES: protein motif:HMM:TIGR00251.3
COORDINATES: protein motif:HMM:NF013250.2
CDP-alcohol phosphatidyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998087.1
COORDINATES: protein motif:HMM:NF013991.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046917 - triphosphoribosyl-dephospho-CoA synthase activity [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]
triphosphoribosyl-dephospho-CoA synthase
COORDINATES: protein motif:HMM:NF013725.2
GO:0020037 - heme binding [Evidence IEA]
GO:0017004 - cytochrome complex assembly [Evidence IEA]
COORDINATES: protein motif:HMM:NF037434.2
COORDINATES: similar to AA sequence:RefSeq:WP_013303642.1
GO:0016887 - ATP hydrolysis activity [Evidence IEA]; GO:0140662 - ATP-dependent protein folding chaperone [Evidence IEA]
COORDINATES: protein motif:HMM:NF014566.2
CPBP family intramembrane metalloprotease
COORDINATES: similar to AA sequence:RefSeq:WP_011998146.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123499.1
COORDINATES: protein motif:HMM:NF013658.2
phosphoadenosine phosphosulfate reductase family protein
COORDINATES: protein motif:HMM:NF014071.2
hydantoinase/oxoprolinase family protein
COORDINATES: protein motif:HMM:TIGR01035.1
GO:0008883 - glutamyl-tRNA reductase activity [Evidence IEA]
GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123523.1
COORDINATES: protein motif:HMM:TIGR00196.1
bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
COORDINATES: similar to AA sequence:RefSeq:WP_014026963.1
3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123484.1
GO:0003747 - translation release factor activity [Evidence IEA]
GO:0006415 - translational termination [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998650.1
GO:0000502 - proteasome complex [Evidence IEA]
GO:0004175 - endopeptidase activity [Evidence IEA]
GO:0010498 - proteasomal protein catabolic process [Evidence IEA]
archaeal proteasome endopeptidase complex subunit beta
COORDINATES: protein motif:HMM:NF013334.2
hydrogenase maturation nickel metallochaperone HypA
COORDINATES: similar to AA sequence:RefSeq:WP_014027132.1
COORDINATES: similar to AA sequence:RefSeq:WP_010866776.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123043.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998113.1
Glu-tRNA(Gln) amidotransferase subunit GatE
COORDINATES: similar to AA sequence:RefSeq:WP_011821492.1
GO:0005951 - carbamoyl-phosphate synthase complex [Evidence IEA]
GO:0004088 - carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [Evidence IEA]
carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
COORDINATES: similar to AA sequence:RefSeq:WP_012123540.1
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit
COORDINATES: protein motif:HMM:NF018968.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123527.1
GO:0004585 - ornithine carbamoyltransferase activity [Evidence IEA]
GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123254.1
GO:0005524 - ATP binding [Evidence IEA]; GO:0008986 - pyruvate, water dikinase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA]
GO:0016310 - phosphorylation [Evidence IEA]; GO:0006090 - pyruvate metabolic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026356.1
class I adenylate-forming enzyme family protein
COORDINATES: protein motif:HMM:NF013704.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]
GO:0006306 - DNA methylation [Evidence IEA]
COORDINATES: protein motif:HMM:NF013647.2
GO:0033179 - proton-transporting V-type ATPase, V0 domain [Evidence IEA]
GO:0015078 - proton transmembrane transporter activity [Evidence IEA]
V-type ATPase 116kDa subunit family protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026810.1
2-oxoacid:acceptor oxidoreductase subunit alpha
COORDINATES: similar to AA sequence:RefSeq:WP_012123218.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0030976 - thiamine pyrophosphate binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123217.1
2-oxoacid:acceptor oxidoreductase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123216.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123476.1
COORDINATES: similar to AA sequence:RefSeq:WP_018194161.1
COORDINATES: protein motif:HMM:NF015428.2
COORDINATES: protein motif:HMM:NF012314.2
COORDINATES: protein motif:HMM:NF024853.2
COORDINATES: similar to AA sequence:RefSeq:WP_011838902.1
GO:0003883 - CTP synthase activity [Evidence IEA]
GO:0006241 - CTP biosynthetic process [Evidence IEA]; GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF040647.1
COORDINATES: protein motif:HMM:TIGR00144.1
substrate-binding domain-containing protein
COORDINATES: protein motif:HMM:NF020489.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0004829 - threonine-tRNA ligase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
threonyl-tRNA synthetase editing domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026482.1
COORDINATES: protein motif:HMM:TIGR00310.1
ZPR1 zinc finger domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123369.1
GO:0046914 - transition metal ion binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123206.1
COORDINATES: protein motif:HMM:NF014752.2
GO:0003677 - DNA binding [Evidence IEA]; GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013528.2
COORDINATES: protein motif:HMM:TIGR02338.1
COORDINATES: protein motif:HMM:NF020899.2
COORDINATES: protein motif:HMM:NF040854.1
GO:0008821 - crossover junction endodeoxyribonuclease activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]
GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998115.1
COORDINATES: protein motif:HMM:NF014610.2
COORDINATES: protein motif:HMM:NF014076.2
COORDINATES: protein motif:HMM:TIGR00372.1
GO:0004518 - nuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010865970.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998247.1
GO:0000178 - exosome (RNase complex) [Evidence IEA]
exosome complex RNA-binding protein Rrp4
COORDINATES: similar to AA sequence:RefSeq:WP_010866376.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998245.1
GO:0006401 - RNA catabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF015949.2
COORDINATES: protein motif:HMM:NF013961.2
transglutaminase-like domain-containing protein
COORDINATES: protein motif:HMM:NF014092.2
COORDINATES: protein motif:HMM:NF014093.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123447.1
COORDINATES: protein motif:HMM:NF006826.0
incomplete; partial in the middle of a contig; missing N-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: similar to AA sequence:RefSeq:WP_011998312.1
COORDINATES: protein motif:HMM:NF025001.2
COORDINATES: protein motif:HMM:TIGR01896.1
type I-A CRISPR-associated protein Cas4/Csa1
COORDINATES: protein motif:HMM:TIGR00287.1
GO:0004520 - endodeoxyribonuclease activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF021356.2
COORDINATES: similar to AA sequence:RefSeq:WP_013561574.1
COORDINATES: protein motif:HMM:NF021059.2
COORDINATES: protein motif:HMM:NF012568.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998529.1
COORDINATES: protein motif:HMM:TIGR00336.1
GO:0004588 - orotate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016219.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123531.1
GO:0008795 - NAD+ synthase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00877.1
GO:0004637 - phosphoribosylamine-glycine ligase activity [Evidence IEA]
GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA]; GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_018193509.1
COORDINATES: protein motif:HMM:NF014231.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821261.1
ABC transporter substrate-binding protein
COORDINATES: protein motif:HMM:NF013514.2
GO:0004523 - RNA-DNA hybrid ribonuclease activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00442.1
GO:0004821 - histidine-tRNA ligase activity [Evidence IEA]
GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014737241.1
GO:0004719 - protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [Evidence IEA]
protein-L-isoaspartate(D-aspartate) O-methyltransferase
COORDINATES: protein motif:HMM:NF013584.2
COORDINATES: protein motif:HMM:TIGR00494.1
GO:1903425 - fluoride transmembrane transporter activity [Evidence IEA]
GO:1903424 - fluoride transmembrane transport [Evidence IEA]
COORDINATES: protein motif:HMM:NF017868.2
COORDINATES: protein motif:HMM:NF014059.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026705.1
COORDINATES: protein motif:HMM:NF023276.2
COORDINATES: protein motif:HMM:NF019464.2
COORDINATES: protein motif:HMM:NF018546.2
A24 family peptidase C-terminal domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011821217.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026140.1
frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012804.2
class II aldolase/adducin family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998418.1
COORDINATES: protein motif:HMM:NF021551.2
CRISPR system precrRNA processing endoribonuclease RAMP protein Cas6
COORDINATES: protein motif:HMM:NF012687.2
catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF012640.2
COORDINATES: protein motif:HMM:NF019075.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822240.1
COORDINATES: protein motif:HMM:NF014296.2
methylenetetrahydrofolate reductase C-terminal domain-containing protein
COORDINATES: protein motif:HMM:NF012444.2
COORDINATES: similar to AA sequence:RefSeq:WP_013302793.1
GO:0009228 - thiamine biosynthetic process [Evidence IEA]
sulfide-dependent adenosine diphosphate thiazole synthase
COORDINATES: similar to AA sequence:RefSeq:WP_012123557.1
fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
COORDINATES: similar to AA sequence:RefSeq:WP_011998203.1
COORDINATES: protein motif:HMM:NF021252.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998665.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027506.1
COORDINATES: protein motif:HMM:TIGR01460.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998140.1
COORDINATES: protein motif:HMM:NF015952.2
GTP-dependent dephospho-CoA kinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011839126.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998120.1
COORDINATES: protein motif:HMM:NF015181.2
molybdopterin-guanine dinucleotide biosynthesis protein MobB
COORDINATES: protein motif:HMM:NF016214.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839661.1
class I SAM-dependent methyltransferase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123347.1
isochorismatase family cysteine hydrolase
mechanosensitive ion channel family protein
COORDINATES: protein motif:HMM:NF016166.2
COORDINATES: protein motif:HMM:NF019581.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123388.1
COORDINATES: protein motif:HMM:NF021287.2
COORDINATES: protein motif:HMM:NF015268.2
COORDINATES: protein motif:HMM:NF014100.2
pyridoxal phosphate-dependent aminotransferase
COORDINATES: similar to AA sequence:RefSeq:WP_012123099.1
COORDINATES: protein motif:HMM:NF016157.2
COORDINATES: nucleotide motif:Rfam:14.4:RF00373
archaeal type; Derived by automated computational analysis using gene prediction method: cmsearch.
COORDINATES: similar to AA sequence:RefSeq:WP_014027110.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998432.1
TIGR04053 family radical SAM/SPASM domain-containing protein
COORDINATES: protein motif:HMM:NF014135.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998565.1
GO:0004107 - chorismate synthase activity [Evidence IEA]
GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF016842.2
COORDINATES: protein motif:HMM:TIGR02619.1
COORDINATES: protein motif:HMM:NF041080.1
GO:0016628 - oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [Evidence IEA]
GO:0008654 - phospholipid biosynthetic process [Evidence IEA]
digeranylgeranylglycerophospholipid reductase
COORDINATES: similar to AA sequence:RefSeq:WP_011998456.1
GO:0008686 - 3,4-dihydroxy-2-butanone-4-phosphate synthase activity [Evidence IEA]
3,4-dihydroxy-2-butanone-4-phosphate synthase
COORDINATES: protein motif:HMM:NF006352.0
COORDINATES: protein motif:HMM:NF013621.2
COORDINATES: protein motif:HMM:NF015155.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998488.1
archaeal proteasome endopeptidase complex subunit alpha
COORDINATES: protein motif:HMM:NF013718.2
COORDINATES: protein motif:HMM:TIGR00057.1
GO:0061710 - L-threonylcarbamoyladenylate synthase [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866206.1
GO:0008460 - dTDP-glucose 4,6-dehydratase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123021.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303503.1
signal recognition particle protein Srp54
COORDINATES: similar to AA sequence:RefSeq:WP_014025998.1
COORDINATES: similar to AA sequence:RefSeq:WP_013304300.1
COORDINATES: similar to AA sequence:RefSeq:WP_013303275.1
COORDINATES: protein motif:HMM:NF024252.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123135.1
COORDINATES: protein motif:HMM:NF017745.2
COORDINATES: protein motif:HMM:NF013188.2
COORDINATES: protein motif:HMM:NF012706.2
COORDINATES: protein motif:HMM:TIGR00072.1
GO:0008233 - peptidase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013302589.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123134.1
GO:0004817 - cysteine-tRNA ligase activity [Evidence IEA]
GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_010866599.1
GO:0004826 - phenylalanine-tRNA ligase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]
phenylalanine--tRNA ligase beta subunit-related protein
COORDINATES: protein motif:HMM:NF012673.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998336.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123232.1
COORDINATES: protein motif:HMM:NF018392.2
Sjogren's syndrome/scleroderma autoantigen 1 family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998655.1
[LysW]-aminoadipate/[LysW]-glutamate kinase
COORDINATES: protein motif:HMM:NF019498.2
COORDINATES: protein motif:HMM:NF024423.2
COORDINATES: protein motif:HMM:NF013530.2
NAD-dependent epimerase/dehydratase family protein
COORDINATES: protein motif:HMM:NF014030.2
GO:0016272 - prefoldin complex [Evidence IEA]
GO:0051082 - unfolded protein binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF024850.2
COORDINATES: protein motif:HMM:NF017634.2
COORDINATES: similar to AA sequence:RefSeq:WP_010866654.1
rhomboid family intramembrane serine protease
COORDINATES: similar to AA sequence:RefSeq:WP_013302571.1
GO:0004815 - aspartate-tRNA ligase activity [Evidence IEA]; GO:0005524 - ATP binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]
GO:0006422 - aspartyl-tRNA aminoacylation [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123433.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026655.1
COORDINATES: protein motif:HMM:NF024938.2
COORDINATES: protein motif:HMM:NF024994.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123158.1
MazG nucleotide pyrophosphohydrolase domain-containing protein
COORDINATES: protein motif:HMM:TIGR00522.1
GO:0004164 - diphthine synthase activity [Evidence IEA]
GO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998692.1
ribbon-helix-helix domain-containing protein
COORDINATES: protein motif:HMM:NF026098.2
pyrroline-5-carboxylate reductase dimerization domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998187.1
COORDINATES: protein motif:HMM:TIGR02228.1
GO:0004252 - serine-type endopeptidase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF016228.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998183.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608165.1
COORDINATES: protein motif:HMM:NF015000.2
COORDINATES: protein motif:HMM:NF002446.0
COORDINATES: protein motif:HMM:TIGR00078.1
GO:0004514 - nicotinate-nucleotide diphosphorylase (carboxylating) activity [Evidence IEA]
GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA]
carboxylating nicotinate-nucleotide diphosphorylase
COORDINATES: similar to AA sequence:RefSeq:WP_014025829.1
COORDINATES: protein motif:HMM:NF012905.2
GO:0008152 - metabolic process [Evidence IEA]
incomplete; partial in the middle of a contig; missing C-terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.
COORDINATES: protein motif:HMM:NF017913.2
phosphate-starvation-inducible PsiE family protein
COORDINATES: protein motif:HMM:NF002221.0
COORDINATES: similar to AA sequence:RefSeq:WP_011998645.1
GO:0004014 - adenosylmethionine decarboxylase activity [Evidence IEA]
GO:0008295 - spermidine biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013895.2
GO:0006812 - monoatomic cation transport [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123127.1
GO:0003852 - 2-isopropylmalate synthase activity [Evidence IEA]
GO:0009098 - leucine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014027430.1
isocitrate/isopropylmalate dehydrogenase family protein
COORDINATES: protein motif:HMM:NF015460.2
COORDINATES: similar to AA sequence:RefSeq:WP_011839228.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302539.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025766.1
COORDINATES: protein motif:HMM:TIGR00446.1
RsmB/NOP family class I SAM-dependent RNA methyltransferase
COORDINATES: protein motif:HMM:NF014234.2
GO:0008977 - prephenate dehydrogenase (NAD+) activity [Evidence IEA]; GO:0004665 - prephenate dehydrogenase (NADP+) activity [Evidence IEA]
GO:0006571 - tyrosine biosynthetic process [Evidence IEA]
prephenate dehydrogenase/arogenate dehydrogenase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_012123037.1
COORDINATES: protein motif:HMM:NF020032.2
GO:0005524 - ATP binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]
COORDINATES: protein motif:HMM:NF020287.2
COORDINATES: protein motif:HMM:TIGR02495.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]
GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA]; GO:0051353 - positive regulation of oxidoreductase activity [Evidence IEA]
anaerobic ribonucleoside-triphosphate reductase activating protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998585.1
GO:0030337 - DNA polymerase processivity factor activity [Evidence IEA]
GO:0006260 - DNA replication [Evidence IEA]
proliferating cell nuclear antigen (pcna)
COORDINATES: protein motif:HMM:NF014011.2
GO:0003896 - DNA primase activity [Evidence IEA]
GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA]
DNA primase small subunit domain-containing protein
COORDINATES: protein motif:HMM:NF021475.2
COORDINATES: protein motif:HMM:NF018349.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998458.1
GO:0016779 - nucleotidyltransferase activity [Evidence IEA]
nucleotidyltransferase domain-containing protein
COORDINATES: protein motif:HMM:TIGR01902.1
COORDINATES: protein motif:HMM:TIGR00322.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737138.1
COORDINATES: similar to AA sequence:RefSeq:WP_011838940.1
translation initiation factor IF-2 subunit alpha
COORDINATES: protein motif:HMM:NF015648.2
COORDINATES: similar to AA sequence:RefSeq:WP_011822294.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822082.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998319.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998320.1
COORDINATES: similar to AA sequence:RefSeq:WP_012608779.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998322.1
COORDINATES: protein motif:HMM:TIGR00323.1
COORDINATES: protein motif:HMM:NF017380.2
COORDINATES: protein motif:HMM:NF023550.2
COORDINATES: similar to AA sequence:RefSeq:WP_014026524.1
COORDINATES: protein motif:HMM:NF018024.2
COORDINATES: protein motif:HMM:TIGR00104.1
GO:0008757 - S-adenosylmethionine-dependent methyltransferase activity [Evidence IEA]
tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO
COORDINATES: similar to AA sequence:RefSeq:WP_013142971.1
COORDINATES: protein motif:HMM:NF024091.2
COORDINATES: protein motif:HMM:NF020893.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998381.1
COORDINATES: protein motif:HMM:NF001975.0
COORDINATES: protein motif:HMM:NF014035.2
sulfite exporter TauE/SafE family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998380.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123195.1
COORDINATES: protein motif:HMM:NF024912.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998443.1
GO:0015930 - glutamate synthase activity [Evidence IEA]; GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors [Evidence IEA]
GO:0006537 - glutamate biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF013046.2
COORDINATES: protein motif:HMM:NF018410.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998048.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123573.1
COORDINATES: similar to AA sequence:RefSeq:WP_014025936.1
COORDINATES: protein motif:HMM:NF012432.2
COORDINATES: protein motif:HMM:NF014013.2
GO:0004540 - ribonuclease activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123563.1
COORDINATES: protein motif:HMM:NF006351.0
COORDINATES: similar to AA sequence:RefSeq:WP_011998358.1
translation initiation factor IF-2 subunit gamma
COORDINATES: similar to AA sequence:RefSeq:WP_013562883.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998685.1
COORDINATES: protein motif:HMM:NF013094.2
COORDINATES: protein motif:HMM:NF016353.2
GO:0008641 - ubiquitin-like modifier activating enzyme activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF013734.2
COORDINATES: protein motif:HMM:NF013340.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998359.1
GO:0003824 - catalytic activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004655 - porphobilinogen synthase activity [Evidence IEA]
GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123300.1
COORDINATES: protein motif:HMM:NF026160.2
COORDINATES: protein motif:HMM:NF028302.2
COORDINATES: protein motif:HMM:NF015651.2
lysylphosphatidylglycerol synthase transmembrane domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_014026520.1
GO:0003987 - acetate-CoA ligase activity [Evidence IEA]
GO:0019427 - acetyl-CoA biosynthetic process from acetate [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123522.1
GO:0051539 - 4 iron, 4 sulfur cluster binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:1904047 - S-adenosyl-L-methionine binding [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998664.1
COORDINATES: protein motif:HMM:NF015239.2
GO:0017111 - ribonucleoside triphosphate phosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF009226.0
succinate dehydrogenase/fumarate reductase iron-sulfur subunit
COORDINATES: similar to AA sequence:RefSeq:WP_013304025.1
GO:0004636 - phosphoribosyl-ATP diphosphatase activity [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01855.1
GO:0016884 - carbon-nitrogen ligase activity, with glutamine as amido-N-donor [Evidence IEA]; GO:0000107 - imidazoleglycerol-phosphate synthase activity [Evidence IEA]
imidazole glycerol phosphate synthase subunit HisH
COORDINATES: similar to AA sequence:RefSeq:WP_012123488.1
COORDINATES: protein motif:HMM:NF012993.2
nitrilase-related carbon-nitrogen hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_012122909.1
CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase
COORDINATES: protein motif:HMM:NF024870.2
COORDINATES: protein motif:HMM:NF016085.2
COORDINATES: similar to AA sequence:RefSeq:WP_014025744.1
COORDINATES: protein motif:HMM:NF015513.2
COORDINATES: protein motif:HMM:TIGR01488.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998285.1
COORDINATES: protein motif:HMM:NF014618.2
COORDINATES: similar to AA sequence:RefSeq:WP_012609037.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998282.1
NusA-like transcription termination signal-binding factor
COORDINATES: similar to AA sequence:RefSeq:WP_011998281.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998280.1
COORDINATES: similar to AA sequence:RefSeq:WP_011822713.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998286.1
orc1/cdc6 family replication initiation protein
COORDINATES: protein motif:HMM:NF014056.2
COORDINATES: protein motif:HMM:TIGR01251.1
GO:0004749 - ribose phosphate diphosphokinase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF010328.0
COORDINATES: similar to AA sequence:RefSeq:WP_011998562.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998563.1
COORDINATES: protein motif:HMM:NF012744.2
COORDINATES: protein motif:HMM:NF023395.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123050.1
COORDINATES: similar to AA sequence:RefSeq:WP_014027041.1
GO:0004828 - serine-tRNA ligase activity [Evidence IEA]
GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00284.1
COORDINATES: protein motif:HMM:NF012511.2
GO:0004834 - tryptophan synthase activity [Evidence IEA]
GO:0000162 - tryptophan biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF012300.2
COORDINATES: protein motif:HMM:TIGR01469.1
GO:0004851 - uroporphyrin-III C-methyltransferase activity [Evidence IEA]
GO:0019354 - siroheme biosynthetic process [Evidence IEA]
uroporphyrinogen-III C-methyltransferase
COORDINATES: protein motif:HMM:NF014641.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123368.1
GO:0004356 - glutamate-ammonia ligase activity [Evidence IEA]
GO:0006542 - glutamine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_012123514.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase
COORDINATES: protein motif:HMM:NF013594.2
COORDINATES: protein motif:HMM:TIGR00264.2
nascent polypeptide-associated complex protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998638.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998640.1
COORDINATES: similar to AA sequence:RefSeq:WP_014026916.1
GO:0004418 - hydroxymethylbilane synthase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011998717.1
GO:0042286 - glutamate-1-semialdehyde 2,1-aminomutase activity [Evidence IEA]
glutamate-1-semialdehyde 2,1-aminomutase
COORDINATES: protein motif:HMM:NF012798.2
GO:0015074 - DNA integration [Evidence IEA]; GO:0006310 - DNA recombination [Evidence IEA]
COORDINATES: protein motif:HMM:NF039183.1
COORDINATES: protein motif:HMM:NF014516.2
COORDINATES: protein motif:HMM:NF013237.2
PLP-dependent aspartate aminotransferase family protein
COORDINATES: protein motif:HMM:NF025087.2
COORDINATES: similar to AA sequence:RefSeq:WP_012123238.1
GO:0005948 - acetolactate synthase complex [Evidence IEA]
GO:0003984 - acetolactate synthase activity [Evidence IEA]
biosynthetic-type acetolactate synthase large subunit
COORDINATES: protein motif:HMM:NF017538.2
YqiA/YcfP family alpha/beta fold hydrolase
COORDINATES: similar to AA sequence:RefSeq:WP_011821626.1
COORDINATES: protein motif:HMM:NF016982.2
GO:0008080 - N-acetyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014527.2
COORDINATES: protein motif:HMM:TIGR01209.1
GO:0008452 - RNA ligase activity [Evidence IEA]
GO:0016070 - RNA metabolic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF033823.0
GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
archaemetzincin family Zn-dependent metalloprotease
COORDINATES: protein motif:HMM:TIGR01230.1
GO:0008783 - agmatinase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014766971.1
GO:0006352 - DNA-templated transcription initiation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR01475.1
GO:0008412 - 4-hydroxybenzoate octaprenyltransferase activity [Evidence IEA]
GO:0006744 - ubiquinone biosynthetic process [Evidence IEA]
COORDINATES: protein motif:HMM:NF023403.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122900.1
GO:0003879 - ATP phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143704.1
COORDINATES: similar to AA sequence:RefSeq:WP_012122903.1
COORDINATES: protein motif:HMM:TIGR00549.1
GO:0004496 - mevalonate kinase activity [Evidence IEA]
GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA]; GO:0016126 - sterol biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_014026505.1
COORDINATES: similar to AA sequence:RefSeq:WP_012123177.1
GO:0004795 - threonine synthase activity [Evidence IEA]
GO:0009088 - threonine biosynthetic process [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_011839603.1
COORDINATES: protein motif:HMM:NF014788.2
phosphoribosylformylglycinamidine cyclo-ligase
COORDINATES: protein motif:HMM:NF020078.2
COORDINATES: similar to AA sequence:RefSeq:WP_014025707.1
COORDINATES: protein motif:HMM:NF012998.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998719.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998720.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998724.1
COORDINATES: similar to AA sequence:RefSeq:WP_014737240.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998727.1
COORDINATES: protein motif:HMM:NF014091.2
COORDINATES: protein motif:HMM:NF016310.2
aconitase X catalytic domain-containing protein
COORDINATES: similar to AA sequence:RefSeq:WP_013130099.1
GO:0004807 - triose-phosphate isomerase activity [Evidence IEA]
COORDINATES: similar to AA sequence:RefSeq:WP_013143896.1
COORDINATES: protein motif:HMM:NF001199.0
COORDINATES: protein motif:HMM:NF014845.2
COORDINATES: protein motif:HMM:NF014762.2
metal-dependent transcriptional regulator
COORDINATES: protein motif:HMM:TIGR00106.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998738.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998740.1
COORDINATES: similar to AA sequence:RefSeq:WP_013142937.1
COORDINATES: protein motif:HMM:NF012908.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998748.1
COORDINATES: similar to AA sequence:RefSeq:WP_013302572.1
COORDINATES: similar to AA sequence:RefSeq:WP_012122898.1
GO:0004073 - aspartate-semialdehyde dehydrogenase activity [Evidence IEA]
GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA]
COORDINATES: protein motif:HMM:NF014637.2
putative RNA uridine N3 methyltransferase
COORDINATES: protein motif:HMM:NF013382.2
COORDINATES: protein motif:HMM:NF013847.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122893.1
COORDINATES: protein motif:HMM:NF013079.2
COORDINATES: protein motif:HMM:TIGR02076.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998766.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998765.1
COORDINATES: protein motif:HMM:NF014684.2
branched-chain amino acid ABC transporter permease
COORDINATES: similar to AA sequence:RefSeq:WP_014026475.1
COORDINATES: similar to AA sequence:RefSeq:WP_013562858.1
COORDINATES: similar to AA sequence:RefSeq:WP_011998759.1
GO:0004550 - nucleoside diphosphate kinase activity [Evidence IEA]
GO:0006165 - nucleoside diphosphate phosphorylation [Evidence IEA]
COORDINATES: protein motif:HMM:TIGR00722.1
GO:0016836 - hydro-lyase activity [Evidence IEA]
FumA C-terminus/TtdB family hydratase beta subunit
COORDINATES: protein motif:HMM:NF020132.2
COORDINATES: similar to AA sequence:RefSeq:WP_011821627.1
COORDINATES: protein motif:HMM:TIGR01245.1
GO:0004048 - anthranilate phosphoribosyltransferase activity [Evidence IEA]
COORDINATES: protein motif:HMM:NF014585.2
hydantoinase B/oxoprolinase family protein
COORDINATES: similar to AA sequence:RefSeq:WP_011998239.1
COORDINATES: protein motif:HMM:TIGR02153.1
Glu-tRNA(Gln) amidotransferase subunit GatD
COORDINATES: similar to AA sequence:RefSeq:WP_014027339.1
COORDINATES: protein motif:HMM:NF015946.2
COORDINATES: similar to AA sequence:RefSeq:WP_011998325.1
COORDINATES: protein motif:HMM:NF037131.2
COORDINATES: similar to AA sequence:RefSeq:WP_012122986.1
COORDINATES: protein motif:HMM:TIGR01213.2
GO:0009982 - pseudouridine synthase activity [Evidence IEA]
GO:0031119 - tRNA pseudouridine synthesis [Evidence IEA]
tRNA pseudouridine(54/55) synthase Pus10
COORDINATES: similar to AA sequence:RefSeq:WP_014025786.1
formate--phosphoribosylaminoimidazolecarboxamide ligase
COORDINATES: protein motif:HMM:NF012647.2
prenyltransferase/squalene oxidase repeat-containing protein
COORDINATES: protein motif:HMM:NF012745.2
COORDINATES: protein motif:HMM:TIGR04178.1
COORDINATES: protein motif:HMM:NF021417.2