Coturnix japonica isolate 7356 linkage group LGE22C19W28_E50C23, Coturnix japonica 2.1, whole genome shotgun sequence.
type: Entry
definition: Coturnix japonica isolate 7356 linkage group LGE22C19W28_E50C23, Coturnix japonica 2.1, whole genome shotgun sequence.
sequence version: NC_029544.1
sequence date: 2020-02-18
sequence: sequence
division: CON
label: NC_029544.1
type: RefSeq
SIO_000068: refseq
dblink: PRJNA314147
dblink: SAMN03989050
keyword: WGS
keyword: RefSeq
source: Coturnix japonica (Japanese quail)
organism: Coturnix japonica
taxonomy: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix.
comment: REFSEQ INFORMATION: The reference sequence is identical to\nCM003809.1.\nAssembly name: Coturnix japonica 2.0\nThe genomic sequence for this RefSeq record is from the\nwhole-genome assembly released by The International Quail Genome\nConsortium on 2016/03/01. The original whole-genome shotgun project\nhas the accession LSZS00000000.1.\n\n##Genome-Assembly-Data-START##\nAssembly Provider :: McDonnell Genome Institute - Washington\n University School of Medicine\nAssembly Method :: ALLPATHS-LG v. 4.7.0\nAssembly Name :: Coturnix japonica 2.1\nGenome Coverage :: 73X\nSequencing Technology :: Illumina GA IIx\n##Genome-Assembly-Data-END##\n\n##Genome-Annotation-Data-START##\nAnnotation Provider :: NCBI\nAnnotation Status :: Full annotation\nAnnotation Name :: Coturnix japonica Annotation Release\n 101\nAnnotation Version :: 101\nAnnotation Pipeline :: NCBI eukaryotic genome annotation\n pipeline\nAnnotation Software Version :: 8.3\nAnnotation Method :: Best-placed RefSeq; Gnomon\nFeatures Annotated :: Gene; mRNA; CDS; ncRNA\n##Genome-Annotation-Data-END##

sequence
subclass of: SO_0000018
sequence length: 1780026
topology: linear
so has quality: SO_0000987
location: 1..1780026
location: region:1-1780026:1
RO_0002162: 93934

NC_029544
type: RefSeq
SIO_000068: refseq

PRJNA314147
type: BioProject
SIO_000068: bioproject

SAMN03989050
type: BioSample
SIO_000068: biosample

position:1:1
position: 1
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1780026:1
position: 1780026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

feature:1-1780026:1:source
so part of: sequence
organism: Coturnix japonica
mol type: genomic DNA
isolate: 7356
sex: male
tissue type: blood
country: France: Tours, INRA PEAT
linkage group: LGE22C19W28_E50C23

93934
type: Taxonomy
SIO_000068: taxonomy

LOC107325697
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: <292..5105
location: region:292-5105:1
so has part: feature:292-5105:1:exon
subclass of: SO_0000010

107325697
type: Gene
SIO_000068: ncbigene

position:292:1
position: 292
reference: sequence
type: ForwardStrandPosition
type: FuzzyPosition

position:5105:1
position: 5105
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292-5105:1:exon

LOC107325697
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325697
product: formin-like protein 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 87% coverage of the annotated genomic feature by RNAseq alignments, including 39 samples with support for all annotated introns
transcript id: XM_032441060.1
SIO_010081: LOC107325697
subclass of: SO_0000673
so part of: LOC107325697
location: join(<292..561,1113..1184,1278..1402,2137..2339,3988..5105)
location: region:292-5105:1
so has part: feature:292-561:1:exon
so has part: feature:1113-1184:1:exon
so has part: feature:1278-1402:1:exon
so has part: feature:2137-2339:1:exon
so has part: feature:3988-5105:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292-561:1:exon

position:561:1
position: 561
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:1113-1184:1:exon

position:1113:1
position: 1113
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1184:1
position: 1184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:1278-1402:1:exon

position:1278:1
position: 1278
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:1402:1
position: 1402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:2137-2339:1:exon

position:2137:1
position: 2137
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:2339:1
position: 2339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:3988-5105:1:exon

position:3988:1
position: 3988
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325697
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325697
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 3
product: formin-like protein 3
translation: EPSSTTSPPAFNTLRRIIKEKDELSAAVTGASAAPPTTTMRPPPFTEPPPPPLRTPSGPTFPHLRMRPPPARRRAPPPPPLPPPAPPLPGKCPPAAPPLPGASPSIALTVGLSAIRIKKPIKTKFRLPVFNWTALKPNQINGTVFSELDDERVLQDLDLDRFEELFKTKAQGPALDLLCPKSKGTQRAAPKVTLLEANRAKNLAITLRKAGRCPEEICRAIHTLDLAVLPVDFVECLMRFVPTEAELKLLRCYERERRAPEELSAEDQFMLQFSKVERLPQRMAAMAFMGNFGDSIAMLTPVRRGAGQGVQQGLRGAAMQPVCCNAVRPVVCCNATSVLQCNRCAAMQPVCCNAVRPVVCCNATGVLQCNRCAAMQ
SIO_010081: LOC107325697
subclass of: SO_0000673
so part of: LOC107325697
location: join(<292..561,1113..1184,1278..1402,2137..2339,3988..4450)
location: region:292-4450:1
so has part: feature:292-561:1:exon
so has part: feature:1113-1184:1:exon
so has part: feature:1278-1402:1:exon
so has part: feature:2137-2339:1:exon
so has part: feature:3988-4450:1:exon

XP_032296951.1
type: Protein
SIO_000068: ncbiprotein

position:4450:1
position: 4450
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292-561:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:1113-1184:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:1278-1402:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:2137-2339:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:3988-4450:1:exon

ATG101
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(11552..23407)
location: region:11552-23407:-1
so has part: feature:11552-23407:-1:exon
subclass of: SO_0000010

107325696
type: Gene
SIO_000068: ncbigene

position:11552:-1
position: 11552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:23407:-1
position: 23407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:11552-23407:-1:exon

ATG101
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ATG101
product: autophagy related 101
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 6 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886808.2
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(11552..11556,20392..20693,22977..23407))
location: region:11552-23407:-1
so has part: feature:22977-23407:-1:exon
so has part: feature:20392-20693:-1:exon
so has part: feature:11552-11556:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:22977-23407:-1:exon

position:22977:-1
position: 22977
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:20392-20693:-1:exon

position:20392:-1
position: 20392
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:20693:-1
position: 20693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:11552-11556:-1:exon

position:11556:-1
position: 11556
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATG101
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ATG101
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: autophagy-related protein 101
translation: MVGTARRSSRGPRSRSAAMNCRAEVLEVSVEGRQVEEAMLAVLHTVLLHRSTGKFHYKKEGTYSIGTVGTQDVDCDFIDFAYVRVSSEELDRALRKAVGEFKVGRWG
SIO_010081: ATG101
subclass of: SO_0000673
so part of: ATG101
location: complement(join(11552..11556,20392..20693,22977..22993))
location: region:11552-22993:-1
so has part: feature:22977-22993:-1:exon
so has part: feature:20392-20693:-1:exon
so has part: feature:11552-11556:-1:exon

XP_015742294.1
type: Protein
SIO_000068: ncbiprotein

position:22993:-1
position: 22993
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:22977-22993:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:20392-20693:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:11552-11556:-1:exon

NR4A1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: NR4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(25771..34186)
location: region:25771-34186:-1
so has part: feature:25771-34186:-1:exon
subclass of: SO_0000010

107325726
type: Gene
SIO_000068: ncbigene

position:25771:-1
position: 25771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:34186:-1
position: 34186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:25771-34186:-1:exon

NR4A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NR4A1
product: nuclear receptor subfamily 4 group A member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 18 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886871.1
SIO_010081: NR4A1
subclass of: SO_0000673
so part of: NR4A1
location: complement(join(25771..26930,28087..28285,30978..31273,32022..32151,32251..34186))
location: region:25771-34186:-1
so has part: feature:32251-34186:-1:exon
so has part: feature:32022-32151:-1:exon
so has part: feature:30978-31273:-1:exon
so has part: feature:28087-28285:-1:exon
so has part: feature:25771-26930:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:32251-34186:-1:exon

position:32251:-1
position: 32251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:32022-32151:-1:exon

position:32022:-1
position: 32022
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32151:-1
position: 32151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:30978-31273:-1:exon

position:30978:-1
position: 30978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:31273:-1
position: 31273
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:28087-28285:-1:exon

position:28087:-1
position: 28087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:28285:-1
position: 28285
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:25771-26930:-1:exon

position:26930:-1
position: 26930
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NR4A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NR4A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: nuclear receptor subfamily 4 group A member 1
translation: MPCIQAQYGTSTPGPCDRCPTDLLSPDGGRYPLEVAGSDPTGSPSLPGFSTFMESYGGELDAFLCQLPAGGQHAALYGCYPLGQHDETLCSSSSSSSDCYGSSCSVPSPNFAPPQAPGWDGSFGPYSPGYDCGRQWGEGLKGGGSQPQFFFTPPNPVGSPKDPRLMDAEPFVLPHGAAGPFPGLPLAPTSPLLEGPPLPPAPKSRGPGAAEGRCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQPPDASPISLITSLVRAHIDSIPSATKLDYSKVGAHVLLCDPNPIPNPSQCVIPASNPSHCLIPSHPQPIPLHGLNPSLFTRRRPHSSKPEEGKLIFCNGVVLHRLQCVRGFGEWIDAILEFSHSLHRMSVDVPSFSCLAALVIITDRHGLKEPKRVEELQNRIVGCLKDHVAAGEPGRPGCLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPPIVDKIFMDTLPF
SIO_010081: NR4A1
subclass of: SO_0000673
so part of: NR4A1
location: complement(join(26680..26930,28087..28285,30978..31273,32022..32151,32251..32967))
location: region:26680-32967:-1
so has part: feature:32251-32967:-1:exon
so has part: feature:32022-32151:-1:exon
so has part: feature:30978-31273:-1:exon
so has part: feature:28087-28285:-1:exon
so has part: feature:26680-26930:-1:exon

XP_015742357.1
type: Protein
SIO_000068: ncbiprotein

position:26680:-1
position: 26680
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:32967:-1
position: 32967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:32251-32967:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:32022-32151:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:30978-31273:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:28087-28285:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:26680-26930:-1:exon

LOC107325695
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 55685..58747
location: region:55685-58747:1
so has part: feature:55685-58747:1:exon
subclass of: SO_0000010

107325695
type: Gene
SIO_000068: ncbigene

position:55685:1
position: 55685
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:58747:1
position: 58747
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:55685-58747:1:exon

LOC107325695
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325695
product: uncharacterized LOC107325695
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886807.1
SIO_010081: LOC107325695
subclass of: SO_0000673
so part of: LOC107325695
location: join(55685..57379,57812..58747)
location: region:55685-58747:1
so has part: feature:55685-57379:1:exon
so has part: feature:57812-58747:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:55685-57379:1:exon

position:57379:1
position: 57379
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:57812-58747:1:exon

position:57812:1
position: 57812
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325695
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325695
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: uncharacterized protein LOC107325695
translation: MVNRGSLLPDHNSMTSQCSPPIDLEDHGDIERPQDSMVSCCHVATLGLKADHNSMVNCDPMDQAHHNSMVNHNLMDALGLKVLQNSMVKLSPMATLGPTALHDSMINHNPMDALGLKVLHDSMVNRDPMEHLDSKAHWDSMVNHHQPAALGPKTHCDSMVSCDSMVNHDPMDALGLKVLQNSMVNCSPVATLVPKAHCDSMVNHDPMDALGLKVLQNSMVKLSPVAPLVPKVHCDSMVNRDPTDALGLKVLQNSMVNSSPTATLGLNAHQNSMVNHDPMDALGLKVLQNSMVNGSPMDTGGLKSHQDSMVNPSSMAALGPNAHPDSMVSCSPMASLGPKSQCNSMANPNPMAALGPKSQYNSMTNHNPMATLGPKSQYNSMANPNPMAPLPHSHPPTPRHPLPSLPILTLISFLLPLVTMGSTIEFQGLPGQWVRYNPWASNSGRLSFNLKTNVSRSLLLYMDDGGNCDFLELLVTEGKLRLRFTIACAEPAAILSNSMINDGRWHRVALNRMGREATMEVDGESQRGNVRSKRGEMEVGSDLFLGGIPPDVRLSALTLSTVKYEAPFRGWVDDVRVGDEAAILVGAQGVRGEKRKEEEMKEEEEEEEEERRRCELYPPCANGGRCELRKGEPRCDCHGTGHRGPFCGEGEGGGGGRT
SIO_010081: LOC107325695
subclass of: SO_0000673
so part of: LOC107325695
location: join(56339..57379,57812..58747)
location: region:56339-58747:1
so has part: feature:56339-57379:1:exon
so has part: feature:57812-58747:1:exon

XP_015742293.1
type: Protein
SIO_000068: ncbiprotein

position:56339:1
position: 56339
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:56339-57379:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:57812-58747:1:exon

ACVR1B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ACVR1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(58765..74536)
location: region:58765-74536:-1
so has part: feature:58765-74536:-1:exon
subclass of: SO_0000010

107325721
type: Gene
SIO_000068: ncbigene

position:58765:-1
position: 58765
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:74536:-1
position: 74536
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:58765-74536:-1:exon

ACVR1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ACVR1B
product: activin A receptor type 1B
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 46 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_015886864.2
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(58765..59584,61016..61146,62175..62299,63191..63347,64097..64264,64425..64655,66611..66859,69121..69360,74162..74536))
location: region:58765-74536:-1
so has part: feature:74162-74536:-1:exon
so has part: feature:69121-69360:-1:exon
so has part: feature:66611-66859:-1:exon
so has part: feature:64425-64655:-1:exon
so has part: feature:64097-64264:-1:exon
so has part: feature:63191-63347:-1:exon
so has part: feature:62175-62299:-1:exon
so has part: feature:61016-61146:-1:exon
so has part: feature:58765-59584:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:74162-74536:-1:exon

position:74162:-1
position: 74162
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:69121-69360:-1:exon

position:69121:-1
position: 69121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69360:-1
position: 69360
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:66611-66859:-1:exon

position:66611:-1
position: 66611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:66859:-1
position: 66859
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:64425-64655:-1:exon

position:64425:-1
position: 64425
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64655:-1
position: 64655
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:64097-64264:-1:exon

position:64097:-1
position: 64097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:64264:-1
position: 64264
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:63191-63347:-1:exon

position:63191:-1
position: 63191
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:63347:-1
position: 63347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:62175-62299:-1:exon

position:62175:-1
position: 62175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:62299:-1
position: 62299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:61016-61146:-1:exon

position:61016:-1
position: 61016
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:61146:-1
position: 61146
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:58765-59584:-1:exon

position:59584:-1
position: 59584
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACVR1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ACVR1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: activin receptor type-1B
translation: MVSVFNLDGVKHHVRTCIPEAKLIPAGKPFYCLSSEDLRNTHCCYSDFCNKIDLMVPSGHLKDNEPPSSWGPVELVAVIAGPVFLIFVVIIIVVFVFHHHQRVYHNRQRLDMEDPSCEMCLSKDKTLQDLVYDLSTSGSGSGLPLFVQRTVARTIVLQEIIGKGRFGEVWRGRWRGGDVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTIEGMIKLALSAASGLAHLHMEIVGTQGKPGIAHRDLKSKNILVKKNGTCAIADLGLAVRHDSVTDTIDIAPNQRVGTKRYMAPEVLDETINMKHFDSFKCADIYALGLVYWEIARRCNAGGIHEEYQLPYYDLVPSDPSIEEMRKVVCDQKLRPNIPNWWQSYEALRVMGKMMRECWYANGAARLTALRIKKTISQLCVQEDVKI
SIO_010081: ACVR1B
subclass of: SO_0000673
so part of: ACVR1B
location: complement(join(59459..59584,61016..61146,62175..62299,63191..63347,64097..64264,64425..64655,66611..66859,69121..69295))
location: region:59459-69295:-1
so has part: feature:69121-69295:-1:exon
so has part: feature:66611-66859:-1:exon
so has part: feature:64425-64655:-1:exon
so has part: feature:64097-64264:-1:exon
so has part: feature:63191-63347:-1:exon
so has part: feature:62175-62299:-1:exon
so has part: feature:61016-61146:-1:exon
so has part: feature:59459-59584:-1:exon

XP_015742350.1
type: Protein
SIO_000068: ncbiprotein

position:59459:-1
position: 59459
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:69295:-1
position: 69295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:69121-69295:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:66611-66859:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:64425-64655:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:64097-64264:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:63191-63347:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:62175-62299:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:61016-61146:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:59459-59584:-1:exon

ACVRL1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ACVRL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(80740..91295)
location: region:80740-91295:-1
so has part: feature:80740-91295:-1:exon
subclass of: SO_0000010

107325725
type: Gene
SIO_000068: ncbigene

position:80740:-1
position: 80740
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:91295:-1
position: 91295
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:80740-91295:-1:exon

ACVRL1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ACVRL1
product: activin A receptor like type 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 55 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 108 samples with support for all annotated introns
transcript id: XM_015886869.2
SIO_010081: ACVRL1
subclass of: SO_0000673
so part of: ACVRL1
location: complement(join(80740..81095,82326..82456,83855..84052,85484..85759,85830..85976,86284..86383,86470..86687,87094..87318,88421..88491,90885..91295))
location: region:80740-91295:-1
so has part: feature:90885-91295:-1:exon
so has part: feature:88421-88491:-1:exon
so has part: feature:87094-87318:-1:exon
so has part: feature:86470-86687:-1:exon
so has part: feature:86284-86383:-1:exon
so has part: feature:85830-85976:-1:exon
so has part: feature:85484-85759:-1:exon
so has part: feature:83855-84052:-1:exon
so has part: feature:82326-82456:-1:exon
so has part: feature:80740-81095:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:90885-91295:-1:exon

position:90885:-1
position: 90885
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:88421-88491:-1:exon

position:88421:-1
position: 88421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88491:-1
position: 88491
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:87094-87318:-1:exon

position:87094:-1
position: 87094
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:87318:-1
position: 87318
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:86470-86687:-1:exon

position:86470:-1
position: 86470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86687:-1
position: 86687
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:86284-86383:-1:exon

position:86284:-1
position: 86284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:86383:-1
position: 86383
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:85830-85976:-1:exon

position:85830:-1
position: 85830
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85976:-1
position: 85976
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:85484-85759:-1:exon

position:85484:-1
position: 85484
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:85759:-1
position: 85759
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:83855-84052:-1:exon

position:83855:-1
position: 83855
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:84052:-1
position: 84052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:82326-82456:-1:exon

position:82326:-1
position: 82326
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:82456:-1
position: 82456
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:80740-81095:-1:exon

position:81095:-1
position: 81095
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ACVRL1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ACVRL1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: serine/threonine-protein kinase receptor R3
translation: MPPRARGGAVLVLLSLSLAIAADELQCACDMPYCPTPTCTGKVCFVSKRREAGRVTQHKGCFSEHLLENCKPYVMEHFGVRCCNASMCNAELEIYLRGEEALGQSPSLSNLLLLIFVPLLTLLILVALTILFLWKLAQHRRKRLLLFKHSDLGDTDLMLKASMVGDSTLEDLLNDDCTTGSGSGLPFLVQRTVARQITLVECVGKGRYGEVWRGVWQGENVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEKGSLYDYLQRTTLDVETCLGLAASIICGLVHLHVEIFGTQGKPAIAHRDLKSRNILVKSNRQCCIADLGLAVMHSQGSDYLDIGHNPRVGTKRYMAPEVLSEQIRTDCFESYKKTDIWAYGLVLWEITRRTAVNGIVEEYRPPFFDAVPSDPSFEDMKKVVCIEQRTPTVPNRLFSDPVLRALPGLMKECWYQSPAARLTALRIKKSLQKLQQNLHQPKEEQ
SIO_010081: ACVRL1
subclass of: SO_0000673
so part of: ACVRL1
location: complement(join(80961..81095,82326..82456,83855..84052,85484..85759,85830..85976,86284..86383,86470..86687,87094..87318,88421..88487))
location: region:80961-88487:-1
so has part: feature:88421-88487:-1:exon
so has part: feature:87094-87318:-1:exon
so has part: feature:86470-86687:-1:exon
so has part: feature:86284-86383:-1:exon
so has part: feature:85830-85976:-1:exon
so has part: feature:85484-85759:-1:exon
so has part: feature:83855-84052:-1:exon
so has part: feature:82326-82456:-1:exon
so has part: feature:80961-81095:-1:exon

XP_015742355.1
type: Protein
SIO_000068: ncbiprotein

position:80961:-1
position: 80961
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:88487:-1
position: 88487
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:88421-88487:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:87094-87318:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:86470-86687:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:86284-86383:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:85830-85976:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:85484-85759:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:83855-84052:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:82326-82456:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:80961-81095:-1:exon

LOC107325699
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(92644..96973)
location: region:92644-96973:-1
so has part: feature:92644-96973:-1:exon
subclass of: SO_0000010

107325699
type: Gene
SIO_000068: ncbigene

position:92644:-1
position: 92644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96973:-1
position: 96973
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:92644-96973:-1:exon

LOC107325699
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325699
product: photoreceptor ankyrin repeat protein
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 9 samples with support for all annotated introns
transcript id: XM_015886811.2
SIO_010081: LOC107325699
subclass of: SO_0000673
so part of: LOC107325699
location: complement(join(92644..93634,94692..94832,94909..95038,95942..96256,96888..96973))
location: region:92644-96973:-1
so has part: feature:96888-96973:-1:exon
so has part: feature:95942-96256:-1:exon
so has part: feature:94909-95038:-1:exon
so has part: feature:94692-94832:-1:exon
so has part: feature:92644-93634:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:96888-96973:-1:exon

position:96888:-1
position: 96888
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:95942-96256:-1:exon

position:95942:-1
position: 95942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96256:-1
position: 96256
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:94909-95038:-1:exon

position:94909:-1
position: 94909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:95038:-1
position: 95038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:94692-94832:-1:exon

position:94692:-1
position: 94692
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:94832:-1
position: 94832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:92644-93634:-1:exon

position:93634:-1
position: 93634
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325699
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325699
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: photoreceptor ankyrin repeat protein
translation: MTDEHSRAESSSSSDPELYYEEEEDEDGSEPSDSSSICSDDSIYPPSEPPCGAGGSGELSLYQCCLRNDAQLLRERLRCGVGRGEATELDVNGRNGLMVACCQGFVDIVPLLQHCPYMDVNQQDNEGNTALMMAAQAGHITIVNYLLNYFPALDVERRDARGLTALMKAAVQGRHDCVTALLMAGADLHAVDPVKGKTARDWAAFTGRFETTVRIRTLLRRPRAEQFGTHYLPEWPALAGLVAKALSPKSFSQRLSEKIRSIFTFRIPRDPEEDGVLDHMVRMTTSLASPFVSTACRTICPDSPPEVGKRRLSVAEILQGPGTGTASCNGQLMGHGQLERQGQLERQGQLERQGQLEGHGQLEGHGQLEGYGQHVGNGQVALDRAVPEMAPHRHRLLGFLPRLLRANCIFPGERVPRIKLSKASSPPAGGRERRPRVRDKGLLQPPKWRYKELKEDKRAAEEAEGEKKRKKGKKGR
SIO_010081: LOC107325699
subclass of: SO_0000673
so part of: LOC107325699
location: complement(join(92757..93634,94692..94832,94909..95038,95942..96223))
location: region:92757-96223:-1
so has part: feature:95942-96223:-1:exon
so has part: feature:94909-95038:-1:exon
so has part: feature:94692-94832:-1:exon
so has part: feature:92757-93634:-1:exon

XP_015742297.1
type: Protein
SIO_000068: ncbiprotein

position:92757:-1
position: 92757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:96223:-1
position: 96223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:95942-96223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:94909-95038:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:94692-94832:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:92757-93634:-1:exon

FIGNL2
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 113196..129691
location: region:113196-129691:1
so has part: feature:113196-129691:1:exon
subclass of: SO_0000010

107325727
type: Gene
SIO_000068: ncbigene

position:113196:1
position: 113196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:129691:1
position: 129691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:113196-129691:1:exon

FIGNL2
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: FIGNL2
product: fidgetin like 2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 5 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 38 samples with support for all annotated introns
transcript id: XM_015886872.2
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: join(113196..113328,125544..129691)
location: region:113196-129691:1
so has part: feature:113196-113328:1:exon
so has part: feature:125544-129691:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:113196-113328:1:exon

position:113328:1
position: 113328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:125544-129691:1:exon

position:125544:1
position: 125544
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325728
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325728
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(120294..123223)
location: region:120294-123223:-1
so has part: feature:120294-123223:-1:exon
subclass of: SO_0000011

107325728
type: Gene
SIO_000068: ncbigene

position:120294:-1
position: 120294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:123223:-1
position: 123223
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:120294-123223:-1:exon

LOC107325728
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107325728
product: uncharacterized LOC107325728, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns
transcript id: XR_001559754.2
SIO_010081: LOC107325728
subclass of: SO_0000673
so part of: LOC107325728
location: complement(join(120294..120453,120838..121722,121842..122024,123105..123223))
location: region:120294-123223:-1
so has part: feature:123105-123223:-1:exon
so has part: feature:121842-122024:-1:exon
so has part: feature:120838-121722:-1:exon
so has part: feature:120294-120453:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123105-123223:-1:exon

position:123105:-1
position: 123105
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:121842-122024:-1:exon

position:121842:-1
position: 121842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:122024:-1
position: 122024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:120838-121722:-1:exon

position:120838:-1
position: 120838
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:121722:-1
position: 121722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:120294-120453:-1:exon

position:120453:-1
position: 120453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325728
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107325728
product: uncharacterized LOC107325728, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns
transcript id: XR_001559753.2
SIO_010081: LOC107325728
subclass of: SO_0000673
so part of: LOC107325728
location: complement(join(120294..121722,121842..122024,123105..123223))
location: region:120294-123223:-1
so has part: feature:123105-123223:-1:exon
so has part: feature:121842-122024:-1:exon
so has part: feature:120294-121722:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:123105-123223:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:121842-122024:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:120294-121722:-1:exon

FIGNL2
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: FIGNL2
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: putative fidgetin-like protein 2
translation: MHWSPEHAQSLNQWPEQHLDVSSTTSSPAHKSDLYPSTRQRFNYAWANDDISALTASNLLKRYAEKYSGVLDAPYERPALSGYGDGAFGPINGQKGDGEPWPVPHSSDGAYPLTPIHDGLPGAKAVVPPAVPAGSAPLGLTGSPVVSANLADPIYAGNSCGGAAGSGGLGSSQEYPGGYGSTYLPSGYCGQPSTALAPPHPPTLHSSGLLQPTHPSSALVPGYGSSGPVYNYASGSYATQPGYGAIHPPHPSASYLPSGIAAPTPLPAPGPTTRPSVVPAYGYQAAGLASLAVPPLGTEATGALKRKAFDISGGEDEAEGRYRKYSYEQPKSPYPMSDNGECRGNGFPSASKRPTGSAEEHSSKYGGQAMKSVVSPPYGAGDAPLRPTESFEKFSPPLANGERAAEPGHPFPLRLPPKAPVFSSQPVEEQPKNVDPLVLELVNTKIVERGPPVQWTDIAGQVSIKAAIEEELVWPILRPGAYTGASRLPRTILLFGPRGTGKTLLSRCISTQLGSTLLKLSATALLTTWKAEAEKILQTVFFVAKCRQPSVVLIMEVESLLVAQDGGQAGNLKSQLLSYLDNVATSAEQNVVIIGTTSRPGSMDEASHRRFAKRFYISPPDSIARRQILHHALAQQSSCLSEREMASLVQHTESFSGSELIQLCQHAGATTLHGLPGQIQPTSYKDFEKAFCKVRPAASQKELDLFAEWDKMYGSRH
SIO_010081: FIGNL2
subclass of: SO_0000673
so part of: FIGNL2
location: 125555..127708
location: region:125555-127708:1
so has part: feature:125555-127708:1:exon

XP_015742358.1
type: Protein
SIO_000068: ncbiprotein

position:125555:1
position: 125555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:127708:1
position: 127708
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:125555-127708:1:exon

SCN8A
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(134408..181835)
location: region:134408-181835:-1
so has part: feature:134408-181835:-1:exon
subclass of: SO_0000010

107325716
type: Gene
SIO_000068: ncbigene

position:134408:-1
position: 134408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:181835:-1
position: 181835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:134408-181835:-1:exon

SCN8A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SCN8A
product: sodium voltage-gated channel alpha subunit 8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 30 ESTs, 16 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886858.2
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(134408..139056,139565..139835,139932..140036,140705..140842,141182..141235,141656..141940,144428..144550,148537..148710,149098..149252,149933..150050,150447..150917,151622..151978,152533..152706,153252..153490,155096..155231,155858..156217,156470..156757,156908..157114,157544..157685,158102..158165,158527..158748,162275..162366,164597..164725,164931..165020,166195..166313,172994..173323,181594..181835))
location: region:134408-181835:-1
so has part: feature:181594-181835:-1:exon
so has part: feature:172994-173323:-1:exon
so has part: feature:166195-166313:-1:exon
so has part: feature:164931-165020:-1:exon
so has part: feature:164597-164725:-1:exon
so has part: feature:162275-162366:-1:exon
so has part: feature:158527-158748:-1:exon
so has part: feature:158102-158165:-1:exon
so has part: feature:157544-157685:-1:exon
so has part: feature:156908-157114:-1:exon
so has part: feature:156470-156757:-1:exon
so has part: feature:155858-156217:-1:exon
so has part: feature:155096-155231:-1:exon
so has part: feature:153252-153490:-1:exon
so has part: feature:152533-152706:-1:exon
so has part: feature:151622-151978:-1:exon
so has part: feature:150447-150917:-1:exon
so has part: feature:149933-150050:-1:exon
so has part: feature:149098-149252:-1:exon
so has part: feature:148537-148710:-1:exon
so has part: feature:144428-144550:-1:exon
so has part: feature:141656-141940:-1:exon
so has part: feature:141182-141235:-1:exon
so has part: feature:140705-140842:-1:exon
so has part: feature:139932-140036:-1:exon
so has part: feature:139565-139835:-1:exon
so has part: feature:134408-139056:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:181594-181835:-1:exon

position:181594:-1
position: 181594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:172994-173323:-1:exon

position:172994:-1
position: 172994
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173323:-1
position: 173323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:166195-166313:-1:exon

position:166195:-1
position: 166195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:166313:-1
position: 166313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:164931-165020:-1:exon

position:164931:-1
position: 164931
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:165020:-1
position: 165020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:164597-164725:-1:exon

position:164597:-1
position: 164597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:164725:-1
position: 164725
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:162275-162366:-1:exon

position:162275:-1
position: 162275
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:162366:-1
position: 162366
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:158527-158748:-1:exon

position:158527:-1
position: 158527
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158748:-1
position: 158748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:158102-158165:-1:exon

position:158102:-1
position: 158102
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:158165:-1
position: 158165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:157544-157685:-1:exon

position:157544:-1
position: 157544
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157685:-1
position: 157685
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:156908-157114:-1:exon

position:156908:-1
position: 156908
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:157114:-1
position: 157114
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:156470-156757:-1:exon

position:156470:-1
position: 156470
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156757:-1
position: 156757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:155858-156217:-1:exon

position:155858:-1
position: 155858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:156217:-1
position: 156217
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:155096-155231:-1:exon

position:155096:-1
position: 155096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:155231:-1
position: 155231
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:153252-153490:-1:exon

position:153252:-1
position: 153252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:153490:-1
position: 153490
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:152533-152706:-1:exon

position:152533:-1
position: 152533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:152706:-1
position: 152706
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:151622-151978:-1:exon

position:151622:-1
position: 151622
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:151978:-1
position: 151978
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:150447-150917:-1:exon

position:150447:-1
position: 150447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150917:-1
position: 150917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:149933-150050:-1:exon

position:149933:-1
position: 149933
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:150050:-1
position: 150050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:149098-149252:-1:exon

position:149098:-1
position: 149098
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:149252:-1
position: 149252
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:148537-148710:-1:exon

position:148537:-1
position: 148537
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:148710:-1
position: 148710
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:144428-144550:-1:exon

position:144428:-1
position: 144428
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:144550:-1
position: 144550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:141656-141940:-1:exon

position:141656:-1
position: 141656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141940:-1
position: 141940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:141182-141235:-1:exon

position:141182:-1
position: 141182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:141235:-1
position: 141235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:140705-140842:-1:exon

position:140705:-1
position: 140705
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140842:-1
position: 140842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:139932-140036:-1:exon

position:139932:-1
position: 139932
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:140036:-1
position: 140036
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:139565-139835:-1:exon

position:139565:-1
position: 139565
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:139835:-1
position: 139835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:134408-139056:-1:exon

position:139056:-1
position: 139056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SCN8A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SCN8A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: sodium channel protein type 8 subunit alpha
translation: MAARLLAPPGPDSFKPFTPESLANIEKRIAEEKKKKRPKQDSSHRDDDEDSKPKPNSDLEAGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNKGKTIFRFSATPALYILTPFNPLRKIAIKILVHSLFSMLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCLEDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCGNSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLILAVVAMAYEEQNQATMEEAEQKEAEFQQMLEQLKKQQEEAQAAAMVTSAGTVSEDAVEDDGGGRMSRSSSEISKLSSKSAKERRNRRKKRKDKELSEGEEKGDNEKVFKSESEDGMRRKAFRLPDNRIGRKFSIMNQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPGSENEFADDEHSTVEESEGRRDSLFIPIRGRDRRSSYSGYSGYSQGSRSSRIFPNLRRNIKRNSTVDCNGVVSLIGGPPSSMPGGRLLPEGTTEIEIKKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCPPCWYKFANTFLIWECHPYWIKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPEFEHVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVTLSLMELSLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWIKKKVREFMQAHFKQREADEVKPLDELYDKKVNCIANHTGADIHRDIDYQKNGNGTTSGIGSSVEKYIIDEDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEKLDDTSSSEGSTIDIKPEVEEVPVEAPEEYLDPDACFTEGCMQRCKCCQVNIEEGLGKSWWTLRKTCFLIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKTIRTILEYADKVFTYIFILEMLLKWCAYGFVKFFTNAWCWLDFLIVAVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYHYCFNETSEERFEIDIVNNKTDCEALMPPNSTEIRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNRIQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECVLKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDPDATQFIEYSKLSDFADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQMEERFVASNPSKVSYEPITTTLRRKQEEVSAVVLQRAYRSRLARRGFISRRPLPTKMENGGANREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRRERVKRQKEVRESKC
SIO_010081: SCN8A
subclass of: SO_0000673
so part of: SCN8A
location: complement(join(137909..139056,139565..139835,139932..140036,140705..140842,141182..141235,141656..141940,144428..144550,148537..148710,149098..149252,149933..150050,150447..150917,151622..151978,152533..152706,153252..153490,155096..155231,155858..156217,156470..156757,156908..157114,157544..157685,158102..158165,158527..158748,162275..162366,164597..164725,164931..165020,166195..166313,172994..173269))
location: region:137909-173269:-1
so has part: feature:172994-173269:-1:exon
so has part: feature:166195-166313:-1:exon
so has part: feature:164931-165020:-1:exon
so has part: feature:164597-164725:-1:exon
so has part: feature:162275-162366:-1:exon
so has part: feature:158527-158748:-1:exon
so has part: feature:158102-158165:-1:exon
so has part: feature:157544-157685:-1:exon
so has part: feature:156908-157114:-1:exon
so has part: feature:156470-156757:-1:exon
so has part: feature:155858-156217:-1:exon
so has part: feature:155096-155231:-1:exon
so has part: feature:153252-153490:-1:exon
so has part: feature:152533-152706:-1:exon
so has part: feature:151622-151978:-1:exon
so has part: feature:150447-150917:-1:exon
so has part: feature:149933-150050:-1:exon
so has part: feature:149098-149252:-1:exon
so has part: feature:148537-148710:-1:exon
so has part: feature:144428-144550:-1:exon
so has part: feature:141656-141940:-1:exon
so has part: feature:141182-141235:-1:exon
so has part: feature:140705-140842:-1:exon
so has part: feature:139932-140036:-1:exon
so has part: feature:139565-139835:-1:exon
so has part: feature:137909-139056:-1:exon

XP_015742344.1
type: Protein
SIO_000068: ncbiprotein

position:137909:-1
position: 137909
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:173269:-1
position: 173269
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:172994-173269:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:166195-166313:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:164931-165020:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:164597-164725:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:162275-162366:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:158527-158748:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:158102-158165:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:157544-157685:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:156908-157114:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:156470-156757:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:155858-156217:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:155096-155231:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:153252-153490:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:152533-152706:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:151622-151978:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:150447-150917:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:149933-150050:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:149098-149252:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:148537-148710:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:144428-144550:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:141656-141940:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:141182-141235:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:140705-140842:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:139932-140036:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:139565-139835:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:137909-139056:-1:exon

METTL7A
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 185417..187684
location: region:185417-187684:1
so has part: feature:185417-187684:1:exon
subclass of: SO_0000010

107325711
type: Gene
SIO_000068: ncbigene

position:185417:1
position: 185417
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187684:1
position: 187684
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185417-187684:1:exon

METTL7A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: METTL7A
product: methyltransferase like 7A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 42 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 157 samples with support for all annotated introns
transcript id: XM_015886840.2
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: join(185417..186213,187328..187684)
location: region:185417-187684:1
so has part: feature:185417-186213:1:exon
so has part: feature:187328-187684:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:185417-186213:1:exon

position:186213:1
position: 186213
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:187328-187684:1:exon

position:187328:1
position: 187328
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

METTL7A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: METTL7A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: methyltransferase-like protein 7A
translation: MELTILFLRACLALLAMPIYLLSFLGVWGPFCKKVFFPYFLEKLSTVHNRKTKKQKQELFRNLPDFTGPSGELKLLEIGTGCGANFQFYPPGCKVTCSDVNPNFQQGLSRSMSKNQHIHYERFLTAAGEDLHQVPSGSVDAVVCTLVLCSVQSVSKTLKEVQRVLRPGGVFYFLEHVAANPSSWKLFWQQVCHPTWKLVFDGCCLTREIWKDLEEANFSELKLQHISVPLPWTPIKPHIIGYAVK
SIO_010081: METTL7A
subclass of: SO_0000673
so part of: METTL7A
location: join(185713..186213,187328..187564)
location: region:185713-187564:1
so has part: feature:185713-186213:1:exon
so has part: feature:187328-187564:1:exon

XP_015742326.1
type: Protein
SIO_000068: ncbiprotein

position:185713:1
position: 185713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:187564:1
position: 187564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:185713-186213:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:187328-187564:1:exon

TMPRSS12
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 188221..194783
location: region:188221-194783:1
so has part: feature:188221-194783:1:exon
subclass of: SO_0000010

107325709
type: Gene
SIO_000068: ncbigene

position:188221:1
position: 188221
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:194783:1
position: 194783
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188221-194783:1:exon

TMPRSS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TMPRSS12
product: transmembrane serine protease 12, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 29 samples with support for all annotated introns
transcript id: XM_015886833.2
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(188221..188436,188847..189045,189599..189870,190411..190553,191277..194783)
location: region:188221-194783:1
so has part: feature:188221-188436:1:exon
so has part: feature:188847-189045:1:exon
so has part: feature:189599-189870:1:exon
so has part: feature:190411-190553:1:exon
so has part: feature:191277-194783:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:188221-188436:1:exon

position:188436:1
position: 188436
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188847-189045:1:exon

position:188847:1
position: 188847
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189045:1
position: 189045
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:189599-189870:1:exon

position:189599:1
position: 189599
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:189870:1
position: 189870
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:190411-190553:1:exon

position:190411:1
position: 190411
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:190553:1
position: 190553
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:191277-194783:1:exon

position:191277:1
position: 191277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

TMPRSS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 12 isoform X1
translation: MRPQLPTASVLLLWVLASTDPSVLAPRLSLEVLVECGWRPLMDDISGSRIVGGDTAPLGSWPWAVSLQVQLVGVRFAHICGGALVSENSVLTAAHCTTGRMDPYYWRAVMGTNNIWKHSKHVLKRRIARIYVHPEFNRETFENDIALFQLRSAVHYSDYIQPICLPPIHPYLYADNKIKCFISGWGHVREKGKPSSVLQEAGVEIIPSHVCNSSQSYGGLINANMICAGSPSGGVDSCQGDSGGPLACHYPPANKFYVIGVTSFGLGCGHPNFPGIYVRLAPYRRWIKSQLLLISTATAPASTALTLTAIGVVLLHTS
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(188334..188436,188847..189045,189599..189870,190411..190553,191277..191516)
location: region:188334-191516:1
so has part: feature:188334-188436:1:exon
so has part: feature:188847-189045:1:exon
so has part: feature:189599-189870:1:exon
so has part: feature:190411-190553:1:exon
so has part: feature:191277-191516:1:exon

XP_015742319.1
type: Protein
SIO_000068: ncbiprotein

position:188334:1
position: 188334
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:191516:1
position: 191516
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188334-188436:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:188847-189045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189599-189870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190411-190553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191277-191516:1:exon

TMPRSS12
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TMPRSS12
product: transmembrane serine protease 12, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 32 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015886835.2
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(188337..188426,188847..189045,189599..189870,190411..190553,191277..194783)
location: region:188337-194783:1
so has part: feature:188337-188426:1:exon
so has part: feature:188847-189045:1:exon
so has part: feature:189599-189870:1:exon
so has part: feature:190411-190553:1:exon
so has part: feature:191277-194783:1:exon

position:188337:1
position: 188337
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188337-188426:1:exon

position:188426:1
position: 188426
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:188847-189045:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:189599-189870:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:190411-190553:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:191277-194783:1:exon

TMPRSS12
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TMPRSS12
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protease serine 12 isoform X2
translation: MDDISGSRIVGGDTAPLGSWPWAVSLQVQLVGVRFAHICGGALVSENSVLTAAHCTTGRMDPYYWRAVMGTNNIWKHSKHVLKRRIARIYVHPEFNRETFENDIALFQLRSAVHYSDYIQPICLPPIHPYLYADNKIKCFISGWGHVREKGKPSSVLQEAGVEIIPSHVCNSSQSYGGLINANMICAGSPSGGVDSCQGDSGGPLACHYPPANKFYVIGVTSFGLGCGHPNFPGIYVRLAPYRRWIKSQLLLISTATAPASTALTLTAIGVVLLHTS
SIO_010081: TMPRSS12
subclass of: SO_0000673
so part of: TMPRSS12
location: join(188867..189045,189599..189870,190411..190553,191277..191516)
location: region:188867-191516:1
so has part: feature:188867-189045:1:exon
so has part: feature:189599-189870:1:exon
so has part: feature:190411-190553:1:exon
so has part: feature:191277-191516:1:exon

XP_015742321.1
type: Protein
SIO_000068: ncbiprotein

position:188867:1
position: 188867
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:188867-189045:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:189599-189870:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:190411-190553:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:191277-191516:1:exon

ATF1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(192550..205919)
location: region:192550-205919:-1
so has part: feature:192550-205919:-1:exon
subclass of: SO_0000010

107325710
type: Gene
SIO_000068: ncbigene

position:192550:-1
position: 192550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:205919:-1
position: 205919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:192550-205919:-1:exon

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ATF1
product: activating transcription factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 40 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 91 samples with support for all annotated introns
transcript id: XM_015886837.2
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(192550..195380,196132..196291,196384..196563,197164..197294,198297..198397,199972..200100,201975..202088,205694..205919))
location: region:192550-205919:-1
so has part: feature:205694-205919:-1:exon
so has part: feature:201975-202088:-1:exon
so has part: feature:199972-200100:-1:exon
so has part: feature:198297-198397:-1:exon
so has part: feature:197164-197294:-1:exon
so has part: feature:196384-196563:-1:exon
so has part: feature:196132-196291:-1:exon
so has part: feature:192550-195380:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:205694-205919:-1:exon

position:205694:-1
position: 205694
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:201975-202088:-1:exon

position:201975:-1
position: 201975
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202088:-1
position: 202088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:199972-200100:-1:exon

position:199972:-1
position: 199972
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:200100:-1
position: 200100
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:198297-198397:-1:exon

position:198297:-1
position: 198297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:198397:-1
position: 198397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:197164-197294:-1:exon

position:197164:-1
position: 197164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:197294:-1
position: 197294
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:196384-196563:-1:exon

position:196384:-1
position: 196384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196563:-1
position: 196563
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:196132-196291:-1:exon

position:196132:-1
position: 196132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:196291:-1
position: 196291
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:192550-195380:-1:exon

position:195380:-1
position: 195380
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ATF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ATF1
product: activating transcription factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 46 ESTs, 39 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 161 samples with support for all annotated introns
transcript id: XM_015886838.2
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(192550..195380,196132..196291,196384..196563,197164..197294,198297..198397,199972..200100,201802..201878,201975..202088,205694..205917))
location: region:192550-205917:-1
so has part: feature:205694-205917:-1:exon
so has part: feature:201975-202088:-1:exon
so has part: feature:201802-201878:-1:exon
so has part: feature:199972-200100:-1:exon
so has part: feature:198297-198397:-1:exon
so has part: feature:197164-197294:-1:exon
so has part: feature:196384-196563:-1:exon
so has part: feature:196132-196291:-1:exon
so has part: feature:192550-195380:-1:exon

position:205917:-1
position: 205917
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:205694-205917:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:201975-202088:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:201802-201878:-1:exon

position:201802:-1
position: 201802
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:201878:-1
position: 201878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:199972-200100:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:198297-198397:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:197164-197294:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:196384-196563:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:196132-196291:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:192550-195380:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X1
translation: MEEVHKSSSSSVPPSQPSAAQGTALQAAQLSHIAQQMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASAGADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAAQECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(195236..195380,196132..196291,196384..196563,197164..197294,198297..198397,199972..200100,201975..202082))
location: region:195236-202082:-1
so has part: feature:201975-202082:-1:exon
so has part: feature:199972-200100:-1:exon
so has part: feature:198297-198397:-1:exon
so has part: feature:197164-197294:-1:exon
so has part: feature:196384-196563:-1:exon
so has part: feature:196132-196291:-1:exon
so has part: feature:195236-195380:-1:exon

XP_015742323.1
type: Protein
SIO_000068: ncbiprotein

position:195236:-1
position: 195236
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:202082:-1
position: 202082
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201975-202082:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199972-200100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198297-198397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197164-197294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196384-196563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196132-196291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195236-195380:-1:exon

ATF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ATF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cyclic AMP-dependent transcription factor ATF-1 isoform X2
translation: MDSTINKRMSLRGPAPLTVVQLPGEQVQVQGVIQTAQSSSVIHSPQVQTVQVSSLSESEDSQDSSDSIGSTQKARGILARRPSYRKILKDLSSEDTRDRKGDEESPGVSTVTSMSVPTPIYQTSTGQYIAIAANGLQLASAGADGVQGLQTLTMTNAGGTQPGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPTTTSLPQTVVMTSPVTLTSQSSKTDDPQLKREIRLMKNREAAQECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKSV
SIO_010081: ATF1
subclass of: SO_0000673
so part of: ATF1
location: complement(join(195236..195380,196132..196291,196384..196563,197164..197294,198297..198397,199972..200100,201802..201825))
location: region:195236-201825:-1
so has part: feature:201802-201825:-1:exon
so has part: feature:199972-200100:-1:exon
so has part: feature:198297-198397:-1:exon
so has part: feature:197164-197294:-1:exon
so has part: feature:196384-196563:-1:exon
so has part: feature:196132-196291:-1:exon
so has part: feature:195236-195380:-1:exon

XP_015742324.1
type: Protein
SIO_000068: ncbiprotein

position:201825:-1
position: 201825
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:201802-201825:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:199972-200100:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:198297-198397:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:197164-197294:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:196384-196563:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:196132-196291:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:195236-195380:-1:exon

DIP2B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(206942..266330)
location: region:206942-266330:-1
so has part: feature:206942-266330:-1:exon
subclass of: SO_0000010

107325708
type: Gene
SIO_000068: ncbigene

position:206942:-1
position: 206942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266330:-1
position: 266330
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:206942-266330:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_015886830.2
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(206942..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227060..227170,227643..227734,227972..228169,228662..228781,229515..229658,231958..232170,233414..233539,234005..234145,239522..239593,266072..266330))
location: region:206942-266330:-1
so has part: feature:266072-266330:-1:exon
so has part: feature:239522-239593:-1:exon
so has part: feature:234005-234145:-1:exon
so has part: feature:233414-233539:-1:exon
so has part: feature:231958-232170:-1:exon
so has part: feature:229515-229658:-1:exon
so has part: feature:228662-228781:-1:exon
so has part: feature:227972-228169:-1:exon
so has part: feature:227643-227734:-1:exon
so has part: feature:227060-227170:-1:exon
so has part: feature:226308-226431:-1:exon
so has part: feature:225697-225806:-1:exon
so has part: feature:224854-224956:-1:exon
so has part: feature:224260-224324:-1:exon
so has part: feature:223908-224001:-1:exon
so has part: feature:223273-223392:-1:exon
so has part: feature:222931-223045:-1:exon
so has part: feature:222168-222307:-1:exon
so has part: feature:221942-222078:-1:exon
so has part: feature:221547-221627:-1:exon
so has part: feature:221164-221291:-1:exon
so has part: feature:220714-220828:-1:exon
so has part: feature:219589-219790:-1:exon
so has part: feature:219255-219364:-1:exon
so has part: feature:219039-219119:-1:exon
so has part: feature:218349-218472:-1:exon
so has part: feature:217259-217380:-1:exon
so has part: feature:216620-216731:-1:exon
so has part: feature:215879-215988:-1:exon
so has part: feature:215165-215295:-1:exon
so has part: feature:214440-214608:-1:exon
so has part: feature:213304-213474:-1:exon
so has part: feature:212739-212800:-1:exon
so has part: feature:212572-212629:-1:exon
so has part: feature:212170-212244:-1:exon
so has part: feature:211540-211717:-1:exon
so has part: feature:211257-211380:-1:exon
so has part: feature:206942-210749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:266072-266330:-1:exon

position:266072:-1
position: 266072
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

position:239522:-1
position: 239522
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:239593:-1
position: 239593
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:234005-234145:-1:exon

position:234005:-1
position: 234005
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:234145:-1
position: 234145
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:233414-233539:-1:exon

position:233414:-1
position: 233414
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:233539:-1
position: 233539
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:231958-232170:-1:exon

position:231958:-1
position: 231958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:232170:-1
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urn:…
SIO_000300: 6
SIO_000628: feature:229515-229658:-1:exon

position:229515:-1
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urn:…
SIO_000300: 7
SIO_000628: feature:228662-228781:-1:exon

position:228662:-1
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position:228781:-1
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reference: sequence
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urn:…
SIO_000300: 8
SIO_000628: feature:227972-228169:-1:exon

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reference: sequence
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position:228169:-1
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reference: sequence
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urn:…
SIO_000300: 9
SIO_000628: feature:227643-227734:-1:exon

position:227643:-1
position: 227643
reference: sequence
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position:227734:-1
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urn:…
SIO_000300: 10
SIO_000628: feature:227060-227170:-1:exon

position:227060:-1
position: 227060
reference: sequence
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position:227170:-1
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reference: sequence
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urn:…
SIO_000300: 11
SIO_000628: feature:226308-226431:-1:exon

position:226308:-1
position: 226308
reference: sequence
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position:226431:-1
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reference: sequence
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urn:…
SIO_000300: 12
SIO_000628: feature:225697-225806:-1:exon

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reference: sequence
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position:225806:-1
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reference: sequence
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urn:…
SIO_000300: 13
SIO_000628: feature:224854-224956:-1:exon

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reference: sequence
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position:224956:-1
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urn:…
SIO_000300: 14
SIO_000628: feature:224260-224324:-1:exon

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reference: sequence
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position:224324:-1
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reference: sequence
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urn:…
SIO_000300: 15
SIO_000628: feature:223908-224001:-1:exon

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position:224001:-1
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urn:…
SIO_000300: 16
SIO_000628: feature:223273-223392:-1:exon

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urn:…
SIO_000300: 17
SIO_000628: feature:222931-223045:-1:exon

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position:223045:-1
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reference: sequence
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urn:…
SIO_000300: 18
SIO_000628: feature:222168-222307:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:222307:-1
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reference: sequence
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urn:…
SIO_000300: 19
SIO_000628: feature:221942-222078:-1:exon

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position: 221942
reference: sequence
type: ReverseStrandPosition
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position:222078:-1
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reference: sequence
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urn:…
SIO_000300: 20
SIO_000628: feature:221547-221627:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:221627:-1
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reference: sequence
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urn:…
SIO_000300: 21
SIO_000628: feature:221164-221291:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:221291:-1
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reference: sequence
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urn:…
SIO_000300: 22
SIO_000628: feature:220714-220828:-1:exon

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reference: sequence
type: ReverseStrandPosition
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position:220828:-1
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reference: sequence
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urn:…
SIO_000300: 23
SIO_000628: feature:219589-219790:-1:exon

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reference: sequence
type: ReverseStrandPosition
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reference: sequence
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urn:…
SIO_000300: 24
SIO_000628: feature:219255-219364:-1:exon

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reference: sequence
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urn:…
SIO_000300: 25
SIO_000628: feature:219039-219119:-1:exon

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reference: sequence
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position:219119:-1
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reference: sequence
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urn:…
SIO_000300: 26
SIO_000628: feature:218349-218472:-1:exon

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reference: sequence
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position:218472:-1
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reference: sequence
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urn:…
SIO_000300: 27
SIO_000628: feature:217259-217380:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 28
SIO_000628: feature:216620-216731:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 29
SIO_000628: feature:215879-215988:-1:exon

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reference: sequence
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urn:…
SIO_000300: 30
SIO_000628: feature:215165-215295:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 31
SIO_000628: feature:214440-214608:-1:exon

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reference: sequence
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urn:…
SIO_000300: 32
SIO_000628: feature:213304-213474:-1:exon

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reference: sequence
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urn:…
SIO_000300: 33
SIO_000628: feature:212739-212800:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 34
SIO_000628: feature:212572-212629:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 35
SIO_000628: feature:212170-212244:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 36
SIO_000628: feature:211540-211717:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 37
SIO_000628: feature:211257-211380:-1:exon

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reference: sequence
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reference: sequence
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urn:…
SIO_000300: 38
SIO_000628: feature:206942-210749:-1:exon

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reference: sequence
type: ReverseStrandPosition
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DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_015886832.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(206942..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227060..227170,227643..227734,227972..228169,228662..228781,229515..229658,233414..233539,234005..234145,239522..239593,244370..244490))
location: region:206942-244490:-1
so has part: feature:244370-244490:-1:exon
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so has part: feature:234005-234145:-1:exon
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so has part: feature:225697-225806:-1:exon
so has part: feature:224854-224956:-1:exon
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so has part: feature:220714-220828:-1:exon
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so has part: feature:219255-219364:-1:exon
so has part: feature:219039-219119:-1:exon
so has part: feature:218349-218472:-1:exon
so has part: feature:217259-217380:-1:exon
so has part: feature:216620-216731:-1:exon
so has part: feature:215879-215988:-1:exon
so has part: feature:215165-215295:-1:exon
so has part: feature:214440-214608:-1:exon
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so has part: feature:211540-211717:-1:exon
so has part: feature:211257-211380:-1:exon
so has part: feature:206942-210749:-1:exon

position:244490:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244370-244490:-1:exon

position:244370:-1
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reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234005-234145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233414-233539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229515-229658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228662-228781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227972-228169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227643-227734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227060-227170:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226308-226431:-1:exon

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SIO_000300: 11
SIO_000628: feature:225697-225806:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224854-224956:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224260-224324:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223908-224001:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223273-223392:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:222931-223045:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222168-222307:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:221942-222078:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221547-221627:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221164-221291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:220714-220828:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:219589-219790:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219255-219364:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:219039-219119:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:218349-218472:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:217259-217380:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:216620-216731:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:215879-215988:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:215165-215295:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:214440-214608:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:213304-213474:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:212739-212800:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:212572-212629:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:212170-212244:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:211540-211717:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:211257-211380:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:206942-210749:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015886831.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(206942..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227078..227170,227643..227734,227972..228169,228662..228781,229515..229658,231958..232170,233414..233539,234005..234145,239522..239593,244370..244490))
location: region:206942-244490:-1
so has part: feature:244370-244490:-1:exon
so has part: feature:239522-239593:-1:exon
so has part: feature:234005-234145:-1:exon
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so has part: feature:211257-211380:-1:exon
so has part: feature:206942-210749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244370-244490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

urn:…
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SIO_000628: feature:234005-234145:-1:exon

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urn:…
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SIO_000628: feature:231958-232170:-1:exon

urn:…
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SIO_000628: feature:229515-229658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228662-228781:-1:exon

urn:…
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SIO_000628: feature:227972-228169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227643-227734:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227078-227170:-1:exon

position:227078:-1
position: 227078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:226308-226431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225697-225806:-1:exon

urn:…
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SIO_000628: feature:224854-224956:-1:exon

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SIO_000628: feature:224260-224324:-1:exon

urn:…
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urn:…
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SIO_000628: feature:223273-223392:-1:exon

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urn:…
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SIO_000628: feature:222168-222307:-1:exon

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SIO_000628: feature:221942-222078:-1:exon

urn:…
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urn:…
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SIO_000628: feature:221164-221291:-1:exon

urn:…
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SIO_000628: feature:220714-220828:-1:exon

urn:…
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SIO_000628: feature:219589-219790:-1:exon

urn:…
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SIO_000628: feature:219255-219364:-1:exon

urn:…
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urn:…
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urn:…
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SIO_000628: feature:216620-216731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:215879-215988:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:215165-215295:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:214440-214608:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:213304-213474:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:212739-212800:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:212572-212629:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:212170-212244:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:211540-211717:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:211257-211380:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:206942-210749:-1:exon

DIP2B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DIP2B
product: disco interacting protein 2 homolog B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 33 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XM_015886829.1
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(206942..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227060..227170,227643..227734,227972..228169,228662..228781,229515..229658,231958..232170,233414..233539,234005..234145,239522..239593,244370..244490))
location: region:206942-244490:-1
so has part: feature:244370-244490:-1:exon
so has part: feature:239522-239593:-1:exon
so has part: feature:234005-234145:-1:exon
so has part: feature:233414-233539:-1:exon
so has part: feature:231958-232170:-1:exon
so has part: feature:229515-229658:-1:exon
so has part: feature:228662-228781:-1:exon
so has part: feature:227972-228169:-1:exon
so has part: feature:227643-227734:-1:exon
so has part: feature:227060-227170:-1:exon
so has part: feature:226308-226431:-1:exon
so has part: feature:225697-225806:-1:exon
so has part: feature:224854-224956:-1:exon
so has part: feature:224260-224324:-1:exon
so has part: feature:223908-224001:-1:exon
so has part: feature:223273-223392:-1:exon
so has part: feature:222931-223045:-1:exon
so has part: feature:222168-222307:-1:exon
so has part: feature:221942-222078:-1:exon
so has part: feature:221547-221627:-1:exon
so has part: feature:221164-221291:-1:exon
so has part: feature:220714-220828:-1:exon
so has part: feature:219589-219790:-1:exon
so has part: feature:219255-219364:-1:exon
so has part: feature:219039-219119:-1:exon
so has part: feature:218349-218472:-1:exon
so has part: feature:217259-217380:-1:exon
so has part: feature:216620-216731:-1:exon
so has part: feature:215879-215988:-1:exon
so has part: feature:215165-215295:-1:exon
so has part: feature:214440-214608:-1:exon
so has part: feature:213304-213474:-1:exon
so has part: feature:212739-212800:-1:exon
so has part: feature:212572-212629:-1:exon
so has part: feature:212170-212244:-1:exon
so has part: feature:211540-211717:-1:exon
so has part: feature:211257-211380:-1:exon
so has part: feature:206942-210749:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:244370-244490:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234005-234145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233414-233539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231958-232170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229515-229658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228662-228781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227972-228169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227643-227734:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227060-227170:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226308-226431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225697-225806:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224854-224956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224260-224324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223908-224001:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223273-223392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222931-223045:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222168-222307:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221942-222078:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221547-221627:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221164-221291:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:220714-220828:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219589-219790:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:219255-219364:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:219039-219119:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:218349-218472:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:217259-217380:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:216620-216731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:215879-215988:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:215165-215295:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:214440-214608:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:213304-213474:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:212739-212800:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:212572-212629:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:212170-212244:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:211540-211717:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:211257-211380:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:206942-210749:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X2
translation: MAEPAAAGISSLPREVREQLAELELELSEGDITQKGYEKKRAKLLAPYVPQTQGVDPALQKETRTQTPTPSATPAPAPSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSTRPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISVAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGIMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGLTKNTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAHTTPDHALFLLLNAKGAAVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTSEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLSLWLSTVSQHKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(210497..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227060..227170,227643..227734,227972..228169,228662..228781,229515..229658,231958..232170,233414..233539,234005..234145,239522..239593,266072..266159))
location: region:210497-266159:-1
so has part: feature:266072-266159:-1:exon
so has part: feature:239522-239593:-1:exon
so has part: feature:234005-234145:-1:exon
so has part: feature:233414-233539:-1:exon
so has part: feature:231958-232170:-1:exon
so has part: feature:229515-229658:-1:exon
so has part: feature:228662-228781:-1:exon
so has part: feature:227972-228169:-1:exon
so has part: feature:227643-227734:-1:exon
so has part: feature:227060-227170:-1:exon
so has part: feature:226308-226431:-1:exon
so has part: feature:225697-225806:-1:exon
so has part: feature:224854-224956:-1:exon
so has part: feature:224260-224324:-1:exon
so has part: feature:223908-224001:-1:exon
so has part: feature:223273-223392:-1:exon
so has part: feature:222931-223045:-1:exon
so has part: feature:222168-222307:-1:exon
so has part: feature:221942-222078:-1:exon
so has part: feature:221547-221627:-1:exon
so has part: feature:221164-221291:-1:exon
so has part: feature:220714-220828:-1:exon
so has part: feature:219589-219790:-1:exon
so has part: feature:219255-219364:-1:exon
so has part: feature:219039-219119:-1:exon
so has part: feature:218349-218472:-1:exon
so has part: feature:217259-217380:-1:exon
so has part: feature:216620-216731:-1:exon
so has part: feature:215879-215988:-1:exon
so has part: feature:215165-215295:-1:exon
so has part: feature:214440-214608:-1:exon
so has part: feature:213304-213474:-1:exon
so has part: feature:212739-212800:-1:exon
so has part: feature:212572-212629:-1:exon
so has part: feature:212170-212244:-1:exon
so has part: feature:211540-211717:-1:exon
so has part: feature:211257-211380:-1:exon
so has part: feature:210497-210749:-1:exon

XP_015742316.1
type: Protein
SIO_000068: ncbiprotein

position:210497:-1
position: 210497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:266159:-1
position: 266159
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:266072-266159:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234005-234145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233414-233539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231958-232170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229515-229658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228662-228781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227972-228169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227643-227734:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227060-227170:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226308-226431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225697-225806:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224854-224956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224260-224324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223908-224001:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223273-223392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222931-223045:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222168-222307:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221942-222078:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221547-221627:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221164-221291:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:220714-220828:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219589-219790:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:219255-219364:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:219039-219119:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:218349-218472:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:217259-217380:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:216620-216731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:215879-215988:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:215165-215295:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:214440-214608:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:213304-213474:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:212739-212800:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:212572-212629:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:212170-212244:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:211540-211717:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:211257-211380:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:210497-210749:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X4
translation: MRTGNPEPSECTGGDRTAGAVVDPRAERQSHEGHLWDITQKGYEKKRAKLLAPYVPQTQGVDPALQKETRTQTPTPSATPAPAPSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPENFSVPPDVTATTSSSSTRPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISVAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGIMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGLTKNTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAHTTPDHALFLLLNAKGAAVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTSEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLSLWLSTVSQHKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(210497..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227060..227170,227643..227734,227972..228169,228662..228781,229515..229658,233414..233539,234005..234145,239522..239593,244370..244475))
location: region:210497-244475:-1
so has part: feature:244370-244475:-1:exon
so has part: feature:239522-239593:-1:exon
so has part: feature:234005-234145:-1:exon
so has part: feature:233414-233539:-1:exon
so has part: feature:229515-229658:-1:exon
so has part: feature:228662-228781:-1:exon
so has part: feature:227972-228169:-1:exon
so has part: feature:227643-227734:-1:exon
so has part: feature:227060-227170:-1:exon
so has part: feature:226308-226431:-1:exon
so has part: feature:225697-225806:-1:exon
so has part: feature:224854-224956:-1:exon
so has part: feature:224260-224324:-1:exon
so has part: feature:223908-224001:-1:exon
so has part: feature:223273-223392:-1:exon
so has part: feature:222931-223045:-1:exon
so has part: feature:222168-222307:-1:exon
so has part: feature:221942-222078:-1:exon
so has part: feature:221547-221627:-1:exon
so has part: feature:221164-221291:-1:exon
so has part: feature:220714-220828:-1:exon
so has part: feature:219589-219790:-1:exon
so has part: feature:219255-219364:-1:exon
so has part: feature:219039-219119:-1:exon
so has part: feature:218349-218472:-1:exon
so has part: feature:217259-217380:-1:exon
so has part: feature:216620-216731:-1:exon
so has part: feature:215879-215988:-1:exon
so has part: feature:215165-215295:-1:exon
so has part: feature:214440-214608:-1:exon
so has part: feature:213304-213474:-1:exon
so has part: feature:212739-212800:-1:exon
so has part: feature:212572-212629:-1:exon
so has part: feature:212170-212244:-1:exon
so has part: feature:211540-211717:-1:exon
so has part: feature:211257-211380:-1:exon
so has part: feature:210497-210749:-1:exon

XP_015742318.1
type: Protein
SIO_000068: ncbiprotein

position:244475:-1
position: 244475
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:244370-244475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234005-234145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233414-233539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:229515-229658:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:228662-228781:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:227972-228169:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227643-227734:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227060-227170:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:226308-226431:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:225697-225806:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:224854-224956:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224260-224324:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:223908-224001:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223273-223392:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:222931-223045:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222168-222307:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:221942-222078:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221547-221627:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221164-221291:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:220714-220828:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:219589-219790:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219255-219364:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:219039-219119:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:218349-218472:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:217259-217380:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:216620-216731:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:215879-215988:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:215165-215295:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:214440-214608:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:213304-213474:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:212739-212800:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:212572-212629:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:212170-212244:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:211540-211717:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:211257-211380:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:210497-210749:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X3
translation: MRTGNPEPSECTGGDRTAGAVVDPRAERQSHEGHLWDITQKGYEKKRAKLLAPYVPQTQGVDPALQKETRTQTPTPSATPAPAPSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSTRPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISVAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGIMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGLTKNTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAHTTPDHALFLLLNAKGAAVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTSEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLSLWLSTVSQHKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(210497..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227078..227170,227643..227734,227972..228169,228662..228781,229515..229658,231958..232170,233414..233539,234005..234145,239522..239593,244370..244475))
location: region:210497-244475:-1
so has part: feature:244370-244475:-1:exon
so has part: feature:239522-239593:-1:exon
so has part: feature:234005-234145:-1:exon
so has part: feature:233414-233539:-1:exon
so has part: feature:231958-232170:-1:exon
so has part: feature:229515-229658:-1:exon
so has part: feature:228662-228781:-1:exon
so has part: feature:227972-228169:-1:exon
so has part: feature:227643-227734:-1:exon
so has part: feature:227078-227170:-1:exon
so has part: feature:226308-226431:-1:exon
so has part: feature:225697-225806:-1:exon
so has part: feature:224854-224956:-1:exon
so has part: feature:224260-224324:-1:exon
so has part: feature:223908-224001:-1:exon
so has part: feature:223273-223392:-1:exon
so has part: feature:222931-223045:-1:exon
so has part: feature:222168-222307:-1:exon
so has part: feature:221942-222078:-1:exon
so has part: feature:221547-221627:-1:exon
so has part: feature:221164-221291:-1:exon
so has part: feature:220714-220828:-1:exon
so has part: feature:219589-219790:-1:exon
so has part: feature:219255-219364:-1:exon
so has part: feature:219039-219119:-1:exon
so has part: feature:218349-218472:-1:exon
so has part: feature:217259-217380:-1:exon
so has part: feature:216620-216731:-1:exon
so has part: feature:215879-215988:-1:exon
so has part: feature:215165-215295:-1:exon
so has part: feature:214440-214608:-1:exon
so has part: feature:213304-213474:-1:exon
so has part: feature:212739-212800:-1:exon
so has part: feature:212572-212629:-1:exon
so has part: feature:212170-212244:-1:exon
so has part: feature:211540-211717:-1:exon
so has part: feature:211257-211380:-1:exon
so has part: feature:210497-210749:-1:exon

XP_015742317.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244370-244475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234005-234145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233414-233539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231958-232170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229515-229658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228662-228781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227972-228169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227643-227734:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227078-227170:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226308-226431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225697-225806:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224854-224956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224260-224324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223908-224001:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223273-223392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222931-223045:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222168-222307:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221942-222078:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221547-221627:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221164-221291:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:220714-220828:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219589-219790:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:219255-219364:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:219039-219119:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:218349-218472:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:217259-217380:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:216620-216731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:215879-215988:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:215165-215295:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:214440-214608:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:213304-213474:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:212739-212800:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:212572-212629:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:212170-212244:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:211540-211717:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:211257-211380:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:210497-210749:-1:exon

DIP2B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DIP2B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: disco-interacting protein 2 homolog B isoform X1
translation: MRTGNPEPSECTGGDRTAGAVVDPRAERQSHEGHLWDITQKGYEKKRAKLLAPYVPQTQGVDPALQKETRTQTPTPSATPAPAPSSSSSKFHRARSGGARDERYRSDIHTEAVQAALAKHKEQKMALPMPTKRRSTFVQSPADACTPPDTSSASEDEGSLRRQAALSAALHQSLQNAESWINRSIQGSSTSSSASSTLSHGEGKGTSGSLADVFANTRIENFSVPPDVTATTSSSSTRPAAIDLPPSGIVKGMHKGSNRSSLMDTADGVPVSSRVSTKIQQLLNTLKRPKRPPLKEFFVDDFEEIVEVPQPDPNQPKPEGRQMTPVKGEPLGVVCNWPPALEAALQRWGTTQAKCPCLTALDVTGKPVYTLTYGKLWSRSLKLAYTLLNKLGTKNEPVLKPGDRVALVYPNNDPVMFMVAFYGCLLAEVIPVPIEVPLTRKDAGGQQIGFLLGSCGIALALTTEVCLKGLPKTQNGEIVQFKGWPRLKWVVTDSKYLSKSPKDWQPNISVAGTEPAYIEYKTSKEGSVMGVTVSRIAMLSHCQALSQACNYSEGETIVNVLDFKKDAGLWHGILTNVMNKLHTISVPYSVMKTCPLSWVQRVHTHKAKVALVKCRDLHWAMMAHRDQRDVSLSSLRMLIVTDGANPWSVSSCDAFLSLFQSHGLKPEAICPCATSPEAMTIAIRRPGVPGAPLPGRAILSMNGLSFGVIRVNTEDKNSALTVQDVGHVMPGGIMCIVKPDGPPQLCKTDEIGEICVSSRAGGMMYYGLAGLTKNTFEVIPLNSAGSPVGDVPFVRSGLLGFVGPGSLVFVVGKMDGLLTVSGRRHNADDIVATGLAVESIKTVYRGRIAVFSVSVFYDERIVVVAEQRPDASEEDSFQWMSRVLQAIDSIHQVGVYCLALVPANTLPKTPLGGIHISQTKQHFLEGSLHPCNILMCPHTCVTNLPKPRQKQPGVGPASVMVGNLVAGKRIAQASGRDLGQIEDNDLVKKHQFLTEVLQWRAHTTPDHALFLLLNAKGAAVCTATCLQLHKKAERIASVLCDKGHLNAGDNVVLLYPPGIELITAFYGCLYAGCIPVTVRPPHAQSLTATLPTVRMIVEVSKAACILTTQTLMRLLKSREAAAAVDVKTWPTIIDTDDLPRKRLSQIYKPPTSEMLAYLDFSVSTTGMLTGVKMSHAAVSGLCRAIKLQCELYSSRQIAICLDPYCGLGFVLWCLCSVYSGHQSILIPPMELESNLSLWLSTVSQHKIRDTFCSYSVMELCTKGLGNQVEMLKARGINLSCVRTCVVVAEERPRVSLTHSFSKLFKDIGLSSRAVSTTFGSRVNVAICLQGTSGPDPTTVYVDLKSLRHDRVRLVERGAPQSLLLSESGKILPGVKVVIVNPETKGPLGDSHLGEIWVNSPHTASGYYTIYDNETLQADHFNTRLSFGDAAQTLWARTGYLGFVRRTELTAASGERHDALYVVGALDETLELRGLRYHPIDIETSVSRTHRSIAECAVFTWTNLLVVVVELCGCEQEALDLVPLVTNVVLEEHYLIVGVVVVVDPGVIPINSRGEKQRMHLRDSFLADQLDPIYVAYNM
SIO_010081: DIP2B
subclass of: SO_0000673
so part of: DIP2B
location: complement(join(210497..210749,211257..211380,211540..211717,212170..212244,212572..212629,212739..212800,213304..213474,214440..214608,215165..215295,215879..215988,216620..216731,217259..217380,218349..218472,219039..219119,219255..219364,219589..219790,220714..220828,221164..221291,221547..221627,221942..222078,222168..222307,222931..223045,223273..223392,223908..224001,224260..224324,224854..224956,225697..225806,226308..226431,227060..227170,227643..227734,227972..228169,228662..228781,229515..229658,231958..232170,233414..233539,234005..234145,239522..239593,244370..244475))
location: region:210497-244475:-1
so has part: feature:244370-244475:-1:exon
so has part: feature:239522-239593:-1:exon
so has part: feature:234005-234145:-1:exon
so has part: feature:233414-233539:-1:exon
so has part: feature:231958-232170:-1:exon
so has part: feature:229515-229658:-1:exon
so has part: feature:228662-228781:-1:exon
so has part: feature:227972-228169:-1:exon
so has part: feature:227643-227734:-1:exon
so has part: feature:227060-227170:-1:exon
so has part: feature:226308-226431:-1:exon
so has part: feature:225697-225806:-1:exon
so has part: feature:224854-224956:-1:exon
so has part: feature:224260-224324:-1:exon
so has part: feature:223908-224001:-1:exon
so has part: feature:223273-223392:-1:exon
so has part: feature:222931-223045:-1:exon
so has part: feature:222168-222307:-1:exon
so has part: feature:221942-222078:-1:exon
so has part: feature:221547-221627:-1:exon
so has part: feature:221164-221291:-1:exon
so has part: feature:220714-220828:-1:exon
so has part: feature:219589-219790:-1:exon
so has part: feature:219255-219364:-1:exon
so has part: feature:219039-219119:-1:exon
so has part: feature:218349-218472:-1:exon
so has part: feature:217259-217380:-1:exon
so has part: feature:216620-216731:-1:exon
so has part: feature:215879-215988:-1:exon
so has part: feature:215165-215295:-1:exon
so has part: feature:214440-214608:-1:exon
so has part: feature:213304-213474:-1:exon
so has part: feature:212739-212800:-1:exon
so has part: feature:212572-212629:-1:exon
so has part: feature:212170-212244:-1:exon
so has part: feature:211540-211717:-1:exon
so has part: feature:211257-211380:-1:exon
so has part: feature:210497-210749:-1:exon

XP_015742315.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:244370-244475:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:239522-239593:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:234005-234145:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:233414-233539:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:231958-232170:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:229515-229658:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:228662-228781:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:227972-228169:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:227643-227734:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:227060-227170:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:226308-226431:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:225697-225806:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:224854-224956:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:224260-224324:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:223908-224001:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:223273-223392:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:222931-223045:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:222168-222307:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:221942-222078:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:221547-221627:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:221164-221291:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:220714-220828:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:219589-219790:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:219255-219364:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:219039-219119:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:218349-218472:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:217259-217380:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:216620-216731:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:215879-215988:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:215165-215295:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:214440-214608:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:213304-213474:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:212739-212800:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:212572-212629:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:212170-212244:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:211540-211717:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:211257-211380:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:210497-210749:-1:exon

LARP4
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(270612..284594)
location: region:270612-284594:-1
so has part: feature:270612-284594:-1:exon
subclass of: SO_0000010

107325712
type: Gene
SIO_000068: ncbigene

position:270612:-1
position: 270612
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284594:-1
position: 284594
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:270612-284594:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 96 samples with support for all annotated introns
transcript id: XM_032441073.1
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(270612..271532,271734..271905,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280279,280902..281046,284412..284594))
location: region:270612-284594:-1
so has part: feature:284412-284594:-1:exon
so has part: feature:280902-281046:-1:exon
so has part: feature:280121-280279:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271905:-1:exon
so has part: feature:270612-271532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284412-284594:-1:exon

position:284412:-1
position: 284412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280902-281046:-1:exon

position:280902:-1
position: 280902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:281046:-1
position: 281046
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280121-280279:-1:exon

position:280121:-1
position: 280121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:280279:-1
position: 280279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:279695-279770:-1:exon

position:279695:-1
position: 279695
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279770:-1
position: 279770
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:279053-279189:-1:exon

position:279053:-1
position: 279053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:279189:-1
position: 279189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:278739-278842:-1:exon

position:278739:-1
position: 278739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:278842:-1
position: 278842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:277854-277964:-1:exon

position:277854:-1
position: 277854
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277964:-1
position: 277964
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:277436-277489:-1:exon

position:277436:-1
position: 277436
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:277489:-1
position: 277489
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:276731-276940:-1:exon

position:276731:-1
position: 276731
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276940:-1
position: 276940
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:276304-276407:-1:exon

position:276304:-1
position: 276304
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:276407:-1
position: 276407
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:273457-273690:-1:exon

position:273457:-1
position: 273457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273690:-1
position: 273690
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:273028-273076:-1:exon

position:273028:-1
position: 273028
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:273076:-1
position: 273076
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:272640-272798:-1:exon

position:272640:-1
position: 272640
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272798:-1
position: 272798
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:272118-272230:-1:exon

position:272118:-1
position: 272118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:272230:-1
position: 272230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:271734-271905:-1:exon

position:271734:-1
position: 271734
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:271905:-1
position: 271905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:270612-271532:-1:exon

position:271532:-1
position: 271532
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 124 samples with support for all annotated introns
transcript id: XM_015886842.2
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(270612..271532,271734..271902,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280279,280902..281049,284412..284594))
location: region:270612-284594:-1
so has part: feature:284412-284594:-1:exon
so has part: feature:280902-281049:-1:exon
so has part: feature:280121-280279:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271902:-1:exon
so has part: feature:270612-271532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284412-284594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280902-281049:-1:exon

position:281049:-1
position: 281049
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:280121-280279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279695-279770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279053-279189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278739-278842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277854-277964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277436-277489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276731-276940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276304-276407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273457-273690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273028-273076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272640-272798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272118-272230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271734-271902:-1:exon

position:271902:-1
position: 271902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:270612-271532:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 19 ESTs, 7 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 132 samples with support for all annotated introns
transcript id: XM_015886841.2
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(270612..271532,271734..271905,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280279,280902..281049,284412..284594))
location: region:270612-284594:-1
so has part: feature:284412-284594:-1:exon
so has part: feature:280902-281049:-1:exon
so has part: feature:280121-280279:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271905:-1:exon
so has part: feature:270612-271532:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:284412-284594:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280902-281049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280121-280279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279695-279770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279053-279189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278739-278842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277854-277964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277436-277489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276731-276940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276304-276407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273457-273690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273028-273076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272640-272798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272118-272230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271734-271905:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270612-271532:-1:exon

LARP4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LARP4
product: La ribonucleoprotein 4, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 32 samples with support for all annotated introns
transcript id: XM_015886845.2
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(270612..271532,271734..271905,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280279,280902..281046,283816..284113))
location: region:270612-284113:-1
so has part: feature:283816-284113:-1:exon
so has part: feature:280902-281046:-1:exon
so has part: feature:280121-280279:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271905:-1:exon
so has part: feature:270612-271532:-1:exon

position:284113:-1
position: 284113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:283816-284113:-1:exon

position:283816:-1
position: 283816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:280902-281046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280121-280279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279695-279770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279053-279189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278739-278842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277854-277964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277436-277489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276731-276940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276304-276407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273457-273690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273028-273076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272640-272798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272118-272230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271734-271905:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:270612-271532:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X4
translation: MLLFVEVTSKGAGLNPNAKVWQEGPQGSGEAAPPSNGTELPWHEPAAVAGTQTEGNAEISEESCKHYEVMYSTSCEAARNGTGIDEAAANGIVLTTEDLGYQIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIVILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAASLSIGRPFHRNRVKPHFRSSHSSEHAAEGPAAAGTVSVGDGTLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTEIKTQTPKFDLLASNFPPLPGSTAKIPGELMLESRMSDVVKGIGKEKESKDLLPSCPASAPEEQTHSVVQQAVSSSGQAEAVVLSSAVQTESKPEEVSVQKDVKSHTSPPASVCPVSAAKPPRTNTTSSPTNTNAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNVDPPAKSDSSATAERAAEKAADKAEGRMKDHSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(271197..271532,271734..271905,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280279,280902..281046,284412..284429))
location: region:271197-284429:-1
so has part: feature:284412-284429:-1:exon
so has part: feature:280902-281046:-1:exon
so has part: feature:280121-280279:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271905:-1:exon
so has part: feature:271197-271532:-1:exon

XP_032296964.1
type: Protein
SIO_000068: ncbiprotein

position:271197:-1
position: 271197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:284429:-1
position: 284429
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:284412-284429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280902-281046:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280121-280279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279695-279770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279053-279189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278739-278842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277854-277964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277436-277489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276731-276940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276304-276407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273457-273690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273028-273076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272640-272798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272118-272230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271734-271905:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:271197-271532:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X2
translation: MLLFVEQVTSKGAGLNPNAKVWQEGPQGSGEAAPPSNGTELPWHEPAAVAGTQTEGNAEISEESCKHYEVMYSTSCEAARNGTGIDEAAANGIVLTTEDLGYQIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIVILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAASLSIGRPFHRNRVKPHFRSSHSSEHAAEGPAAAGTVSVGDGTLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTEIKTQTPKFDLLASNFPPLPGSTAKIPGELMLESRMSDVVKGIGKEKESKDLLPSCPASAPEEQTHSVVQQAVSSSGQAEAVVLSAVQTESKPEEVSVQKDVKSHTSPPASVCPVSAAKPPRTNTTSSPTNTNAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNVDPPAKSDSSATAERAAEKAADKAEGRMKDHSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(271197..271532,271734..271902,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280279,280902..281049,284412..284429))
location: region:271197-284429:-1
so has part: feature:284412-284429:-1:exon
so has part: feature:280902-281049:-1:exon
so has part: feature:280121-280279:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271902:-1:exon
so has part: feature:271197-271532:-1:exon

XP_015742328.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284412-284429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280902-281049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280121-280279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279695-279770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279053-279189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278739-278842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277854-277964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277436-277489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276731-276940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276304-276407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273457-273690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273028-273076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272640-272798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272118-272230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271734-271902:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:271197-271532:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X1
translation: MLLFVEQVTSKGAGLNPNAKVWQEGPQGSGEAAPPSNGTELPWHEPAAVAGTQTEGNAEISEESCKHYEVMYSTSCEAARNGTGIDEAAANGIVLTTEDLGYQIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIVILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAASLSIGRPFHRNRVKPHFRSSHSSEHAAEGPAAAGTVSVGDGTLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTEIKTQTPKFDLLASNFPPLPGSTAKIPGELMLESRMSDVVKGIGKEKESKDLLPSCPASAPEEQTHSVVQQAVSSSGQAEAVVLSSAVQTESKPEEVSVQKDVKSHTSPPASVCPVSAAKPPRTNTTSSPTNTNAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNVDPPAKSDSSATAERAAEKAADKAEGRMKDHSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(271197..271532,271734..271905,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280279,280902..281049,284412..284429))
location: region:271197-284429:-1
so has part: feature:284412-284429:-1:exon
so has part: feature:280902-281049:-1:exon
so has part: feature:280121-280279:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271905:-1:exon
so has part: feature:271197-271532:-1:exon

XP_015742327.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:284412-284429:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:280902-281049:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:280121-280279:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:279695-279770:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:279053-279189:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:278739-278842:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:277854-277964:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:277436-277489:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:276731-276940:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:276304-276407:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:273457-273690:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:273028-273076:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:272640-272798:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:272118-272230:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:271734-271905:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:271197-271532:-1:exon

LARP4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LARP4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: la-related protein 4 isoform X3
translation: MYSTSCEAARNGTGIDEAAANGIVLTTEDLGYQIYEVAGEGNSVVSTEDIRECLRKQLEFCFSRENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKVRPNHKRCIVILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAFKYLREEVKTFQGKPIMARIKAINTFFAKNGYRVVDSSVYAQPVQTQAQFASPLFMQPVYSPQQYSIYSIVPQTWSPNPAPYFETPLAPFPNGGFVNGFNTPGSYKTSAASLSIGRPFHRNRVKPHFRSSHSSEHAAEGPAAAGTVSVGDGTLSRTNSRNFVMERHNSTLTGHQEQGYSQKDSPTMQMEQNGDYGIGRGRRNIFRGRRRREDDRISRPQPSTEIKTQTPKFDLLASNFPPLPGSTAKIPGELMLESRMSDVVKGIGKEKESKDLLPSCPASAPEEQTHSVVQQAVSSSGQAEAVVLSSAVQTESKPEEVSVQKDVKSHTSPPASVCPVSAAKPPRTNTTSSPTNTNAAPAVAVQEPRKLSYAEVCQKPPKEPPPVPVQPLRELRTNVDPPAKSDSSATAERAAEKAADKAEGRMKDHSGFRGSGAPRGAAGKIREQRRQFGRRSSPQGAPRRVGKEQYVPPRSPK
SIO_010081: LARP4
subclass of: SO_0000673
so part of: LARP4
location: complement(join(271197..271532,271734..271905,272118..272230,272640..272798,273028..273076,273457..273690,276304..276407,276731..276940,277436..277489,277854..277964,278739..278842,279053..279189,279695..279770,280121..280235))
location: region:271197-280235:-1
so has part: feature:280121-280235:-1:exon
so has part: feature:279695-279770:-1:exon
so has part: feature:279053-279189:-1:exon
so has part: feature:278739-278842:-1:exon
so has part: feature:277854-277964:-1:exon
so has part: feature:277436-277489:-1:exon
so has part: feature:276731-276940:-1:exon
so has part: feature:276304-276407:-1:exon
so has part: feature:273457-273690:-1:exon
so has part: feature:273028-273076:-1:exon
so has part: feature:272640-272798:-1:exon
so has part: feature:272118-272230:-1:exon
so has part: feature:271734-271905:-1:exon
so has part: feature:271197-271532:-1:exon

XP_015742331.1
type: Protein
SIO_000068: ncbiprotein

position:280235:-1
position: 280235
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:280121-280235:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:279695-279770:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:279053-279189:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:278739-278842:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:277854-277964:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:277436-277489:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:276731-276940:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:276304-276407:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:273457-273690:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:273028-273076:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:272640-272798:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:272118-272230:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:271734-271905:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:271197-271532:-1:exon

LIMA1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 292087..315762
location: region:292087-315762:1
so has part: feature:292087-315762:1:exon
subclass of: SO_0000010

107325701
type: Gene
SIO_000068: ncbigene

position:292087:1
position: 292087
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:315762:1
position: 315762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292087-315762:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 31 samples with support for all annotated introns
transcript id: XM_015886815.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(292087..292188,295178..295316,297563..297608,299598..300056,304484..304592,305407..305555,307309..307416,309469..309526,310086..310201,313090..313223,313592..315762)
location: region:292087-315762:1
so has part: feature:292087-292188:1:exon
so has part: feature:295178-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:307309-307416:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-315762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292087-292188:1:exon

position:292188:1
position: 292188
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295178-295316:1:exon

position:295178:1
position: 295178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:295316:1
position: 295316
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297563-297608:1:exon

position:297563:1
position: 297563
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:297608:1
position: 297608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:299598-300056:1:exon

position:299598:1
position: 299598
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:300056:1
position: 300056
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:304484-304592:1:exon

position:304484:1
position: 304484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:304592:1
position: 304592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:305407-305555:1:exon

position:305407:1
position: 305407
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:305555:1
position: 305555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:307309-307416:1:exon

position:307309:1
position: 307309
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:307416:1
position: 307416
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:309469-309526:1:exon

position:309469:1
position: 309469
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:309526:1
position: 309526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:310086-310201:1:exon

position:310086:1
position: 310086
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:310201:1
position: 310201
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:313090-313223:1:exon

position:313090:1
position: 313090
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:313223:1
position: 313223
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:313592-315762:1:exon

position:313592:1
position: 313592
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 90 samples with support for all annotated introns
transcript id: XM_015886813.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(292093..292188,295181..295316,297563..297608,299598..300056,304484..304592,305407..305555,307309..307416,309469..309526,310086..310201,313090..313223,313592..315762)
location: region:292093-315762:1
so has part: feature:292093-292188:1:exon
so has part: feature:295181-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:307309-307416:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-315762:1:exon

position:292093:1
position: 292093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292093-292188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295181-295316:1:exon

position:295181:1
position: 295181
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:297563-297608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299598-300056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304484-304592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305407-305555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307309-307416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309469-309526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310086-310201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313090-313223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313592-315762:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 93 samples with support for all annotated introns
transcript id: XM_015886816.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(292093..292188,295181..295316,297563..297608,299598..300056,304484..304592,305407..305555,309469..309526,310086..310201,313090..313223,313592..315762)
location: region:292093-315762:1
so has part: feature:292093-292188:1:exon
so has part: feature:295181-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-315762:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:292093-292188:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:295181-295316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297563-297608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299598-300056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304484-304592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305407-305555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309469-309526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310086-310201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313090-313223:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313592-315762:1:exon

LIMA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LIMA1
product: LIM domain and actin binding 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 21 ESTs, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 19 samples with support for all annotated introns
transcript id: XM_015886814.2
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(292150..292245,295181..295316,297563..297608,299598..300056,304484..304592,305407..305555,307309..307416,309469..309526,310086..310201,313090..313223,313592..315762)
location: region:292150-315762:1
so has part: feature:292150-292245:1:exon
so has part: feature:295181-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:307309-307416:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-315762:1:exon

position:292150:1
position: 292150
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292150-292245:1:exon

position:292245:1
position: 292245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:295181-295316:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:297563-297608:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:299598-300056:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:304484-304592:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:305407-305555:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:307309-307416:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:309469-309526:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:310086-310201:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313090-313223:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:313592-315762:1:exon

LOC107325707
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325707
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(292185..317238)
location: region:292185-317238:-1
so has part: feature:292185-317238:-1:exon
subclass of: SO_0000011

107325707
type: Gene
SIO_000068: ncbigene

position:292185:-1
position: 292185
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317238:-1
position: 317238
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:292185-317238:-1:exon

LOC107325707
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107325707
product: uncharacterized LOC107325707, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004305475.1
SIO_010081: LOC107325707
subclass of: SO_0000673
so part of: LOC107325707
location: complement(join(292185..292919,296201..296356,306679..309627,309992..310096,315848..315929,317013..317238))
location: region:292185-317238:-1
so has part: feature:317013-317238:-1:exon
so has part: feature:315848-315929:-1:exon
so has part: feature:309992-310096:-1:exon
so has part: feature:306679-309627:-1:exon
so has part: feature:296201-296356:-1:exon
so has part: feature:292185-292919:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317013-317238:-1:exon

position:317013:-1
position: 317013
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:315848-315929:-1:exon

position:315848:-1
position: 315848
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:315929:-1
position: 315929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:309992-310096:-1:exon

position:309992:-1
position: 309992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:310096:-1
position: 310096
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:306679-309627:-1:exon

position:306679:-1
position: 306679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:309627:-1
position: 309627
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:296201-296356:-1:exon

position:296201:-1
position: 296201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:296356:-1
position: 296356
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292185-292919:-1:exon

position:292919:-1
position: 292919
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325707
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107325707
product: uncharacterized LOC107325707, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XR_004305476.1
SIO_010081: LOC107325707
subclass of: SO_0000673
so part of: LOC107325707
location: complement(join(292185..292372,292799..296356,306679..309627,309992..310096,315848..315929,317013..317219))
location: region:292185-317219:-1
so has part: feature:317013-317219:-1:exon
so has part: feature:315848-315929:-1:exon
so has part: feature:309992-310096:-1:exon
so has part: feature:306679-309627:-1:exon
so has part: feature:292799-296356:-1:exon
so has part: feature:292185-292372:-1:exon

position:317219:-1
position: 317219
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317013-317219:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315848-315929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309992-310096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:306679-309627:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:292799-296356:-1:exon

position:292799:-1
position: 292799
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:292185-292372:-1:exon

position:292372:-1
position: 292372
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325707
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC107325707
product: uncharacterized LOC107325707, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 6 samples with support for all annotated introns
transcript id: XR_004305477.1
SIO_010081: LOC107325707
subclass of: SO_0000673
so part of: LOC107325707
location: complement(join(295177..296356,306679..306804,309406..309627,309992..310096,315848..315929,317013..317237))
location: region:295177-317237:-1
so has part: feature:317013-317237:-1:exon
so has part: feature:315848-315929:-1:exon
so has part: feature:309992-310096:-1:exon
so has part: feature:309406-309627:-1:exon
so has part: feature:306679-306804:-1:exon
so has part: feature:295177-296356:-1:exon

position:295177:-1
position: 295177
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:317237:-1
position: 317237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317013-317237:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:315848-315929:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:309992-310096:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:309406-309627:-1:exon

position:309406:-1
position: 309406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:306679-306804:-1:exon

position:306804:-1
position: 306804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:295177-296356:-1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALMERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVLGTESRKETLRSSCAEGGHRVLIPELGVGSSLALSSDTEQIPAAGTASHSRASCGTPGQLQCPGVDSRKSQSHSAESGKMENYLREPREVEKPEAIENTEPSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKAETKKSLEMPRFTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLEGETEIQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESPEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSALDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDTLKRSEELEREVVEDKKQKERIENRNIQNAEEKNVEEERELPGIKTTEHNFVENGQENAETDEEEHAEEEQQTPNEEFLEPNSPKHSSLSNVTAKESSPEQHRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(295198..295316,297563..297608,299598..300056,304484..304592,305407..305555,307309..307416,309469..309526,310086..310201,313090..313223,313592..314588)
location: region:295198-314588:1
so has part: feature:295198-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:307309-307416:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-314588:1:exon

XP_015742299.1
type: Protein
SIO_000068: ncbiprotein

position:295198:1
position: 295198
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:314588:1
position: 314588
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:295198-295316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297563-297608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299598-300056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304484-304592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305407-305555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307309-307416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309469-309526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310086-310201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313090-313223:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313592-314588:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALMERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVLGTESRKETLRSSCAEGGHRVLIPELGVGSSLALSSDTEQIPAAGTASHSRASCGTPGQLQCPGVDSRKSQSHSAESGKMENYLREPREVEKPEAIENTEPSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKAETKKSLEMPRFTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLEGETEIQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESPEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSALDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDTLKRSEELEREVVEDKKQKERIENRNIQNAEEKNVEEERELPGIKTTEHNFVENGQENAETDEEEHAEEEQQTPNEEFLEPNSPKHSSLSNVTAKESSPEQHRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(295198..295316,297563..297608,299598..300056,304484..304592,305407..305555,307309..307416,309469..309526,310086..310201,313090..313223,313592..314588)
location: region:295198-314588:1
so has part: feature:295198-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:307309-307416:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-314588:1:exon

XP_015742300.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295198-295316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297563-297608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299598-300056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304484-304592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305407-305555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307309-307416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309469-309526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310086-310201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313090-313223:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313592-314588:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X1
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALMERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVLGTESRKETLRSSCAEGGHRVLIPELGVGSSLALSSDTEQIPAAGTASHSRASCGTPGQLQCPGVDSRKSQSHSAESGKMENYLREPREVEKPEAIENTEPSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKAETKKSLEMPRFTETSIKDRLAKYQAAVSKQGSSTGLVTTNEIQASESELKNYKSEQKENMPPSFEDCISYQDGEKVSVGENSLSFHSSLSEDGNVGQNLEGETEIQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESPEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSALDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDTLKRSEELEREVVEDKKQKERIENRNIQNAEEKNVEEERELPGIKTTEHNFVENGQENAETDEEEHAEEEQQTPNEEFLEPNSPKHSSLSNVTAKESSPEQHRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(295198..295316,297563..297608,299598..300056,304484..304592,305407..305555,307309..307416,309469..309526,310086..310201,313090..313223,313592..314588)
location: region:295198-314588:1
so has part: feature:295198-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:307309-307416:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-314588:1:exon

XP_015742301.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295198-295316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297563-297608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299598-300056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304484-304592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305407-305555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:307309-307416:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:309469-309526:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:310086-310201:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313090-313223:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:313592-314588:1:exon

LIMA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LIMA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LIM domain and actin-binding protein 1 isoform X2
translation: MEPSPFNRRQWTSQSLKITAKELSLVNKNKSSALMERFSRYQKAAEEATAEKKRNSTENLPPHFKRGNLSVLKKKWENPVLGTESRKETLRSSCAEGGHRVLIPELGVGSSLALSSDTEQIPAAGTASHSRASCGTPGQLQCPGVDSRKSQSHSAESGKMENYLREPREVEKPEAIENTEPSGKIEKYSVPLNKLKMMFEKGEAAQPKVARDQRKTAIGRRISENSFSSEDLDVGQGEKSHSASDASPALSPDKAETKKSLEMPRFTETSIKDRLAKYQAAVSKQGSSTGLVTTVSVGENSLSFHSSLSEDGNVGQNLEGETEIQKPVSTKQQNFGSKSLGQTDASLPKTVKKFQLPAKETCVGCQKTVYPMERLLANQQVFHISCFRCSYCNSKLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKQHKELWSSKTECEESPEKTLHGVNATESPQNPGVEDAPIAKVGVLAATMEAKASALPEREEKPAETKKLRIAWPPPSDQSTQGSALDEGIKVLKPKWPPEEESSKPDVLEDVDLDLKKLRRSSSLKERSRPFTVAASFRTVSVKGHKTDNSSSPSKAERDTLKRSEELEREVVEDKKQKERIENRNIQNAEEKNVEEERELPGIKTTEHNFVENGQENAETDEEEHAEEEQQTPNEEFLEPNSPKHSSLSNVTAKESSPEQHRKSQDVGFWEGEDMEDLSVEEQIKRNRYYEDDDEE
SIO_010081: LIMA1
subclass of: SO_0000673
so part of: LIMA1
location: join(295198..295316,297563..297608,299598..300056,304484..304592,305407..305555,309469..309526,310086..310201,313090..313223,313592..314588)
location: region:295198-314588:1
so has part: feature:295198-295316:1:exon
so has part: feature:297563-297608:1:exon
so has part: feature:299598-300056:1:exon
so has part: feature:304484-304592:1:exon
so has part: feature:305407-305555:1:exon
so has part: feature:309469-309526:1:exon
so has part: feature:310086-310201:1:exon
so has part: feature:313090-313223:1:exon
so has part: feature:313592-314588:1:exon

XP_015742302.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:295198-295316:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:297563-297608:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:299598-300056:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:304484-304592:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:305407-305555:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:309469-309526:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:310086-310201:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:313090-313223:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:313592-314588:1:exon

CERS5
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 317277..335184
location: region:317277-335184:1
so has part: feature:317277-335184:1:exon
subclass of: SO_0000010

107325704
type: Gene
SIO_000068: ncbigene

position:317277:1
position: 317277
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:335184:1
position: 335184
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317277-335184:1:exon

CERS5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: CERS5
product: ceramide synthase 5, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XR_001559747.2
SIO_010081: CERS5
so part of: CERS5
location: join(317277..317538,322793..322898,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,332146..332248,333878..333986)
location: region:317277-333986:1
so has part: feature:317277-317538:1:exon
so has part: feature:322793-322898:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:332146-332248:1:exon
so has part: feature:333878-333986:1:exon

position:333986:1
position: 333986
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317277-317538:1:exon

position:317538:1
position: 317538
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:322793-322898:1:exon

position:322793:1
position: 322793
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:322898:1
position: 322898
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:324962-325092:1:exon

position:324962:1
position: 324962
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:325092:1
position: 325092
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:325967-326024:1:exon

position:325967:1
position: 325967
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326024:1
position: 326024
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:326566-326616:1:exon

position:326566:1
position: 326566
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:326616:1
position: 326616
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:327248-327340:1:exon

position:327248:1
position: 327248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:327340:1
position: 327340
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:328634-328762:1:exon

position:328634:1
position: 328634
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:328762:1
position: 328762
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:329004-329110:1:exon

position:329004:1
position: 329004
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:329110:1
position: 329110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:330972-331128:1:exon

position:330972:1
position: 330972
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:331128:1
position: 331128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:332146-332248:1:exon

position:332146:1
position: 332146
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:332248:1
position: 332248
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:333878-333986:1:exon

position:333878:1
position: 333878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: CERS5
product: ceramide synthase 5, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 42 samples with support for all annotated introns
transcript id: XR_001559746.2
SIO_010081: CERS5
so part of: CERS5
location: join(317277..317538,322793..322898,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,332146..332248,332612..333816)
location: region:317277-333816:1
so has part: feature:317277-317538:1:exon
so has part: feature:322793-322898:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:332146-332248:1:exon
so has part: feature:332612-333816:1:exon

position:333816:1
position: 333816
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317277-317538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322793-322898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324962-325092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325967-326024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326566-326616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327248-327340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328634-328762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329004-329110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330972-331128:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:332146-332248:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:332612-333816:1:exon

position:332612:1
position: 332612
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CERS5
product: ceramide synthase 5, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_015886824.2
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(317277..317538,322793..322898,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,332612..333816)
location: region:317277-333816:1
so has part: feature:317277-317538:1:exon
so has part: feature:322793-322898:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:332612-333816:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:317277-317538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322793-322898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324962-325092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325967-326024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326566-326616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327248-327340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328634-328762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329004-329110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330972-331128:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:332612-333816:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CERS5
product: ceramide synthase 5, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 156 samples with support for all annotated introns
transcript id: XM_015886823.2
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(317282..317538,322793..322898,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,333878..335184)
location: region:317282-335184:1
so has part: feature:317282-317538:1:exon
so has part: feature:322793-322898:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:333878-335184:1:exon

position:317282:1
position: 317282
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317282-317538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322793-322898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324962-325092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325967-326024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326566-326616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327248-327340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328634-328762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329004-329110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330972-331128:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333878-335184:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X1
translation: MAAAAVAAVRAWFWNERFWLPHNVTWADLAGEADGGLQYPRASHVLSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGAHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTITKFCESMWRFTFYLSIFLYGIRFLWTAPWFWDTRQCWYSYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQILHVIWSYLIVRTAYKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGVFSTSSNGSNRINGHVAGGQWTEED
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(317348..317538,322793..322898,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,333878..334030)
location: region:317348-334030:1
so has part: feature:317348-317538:1:exon
so has part: feature:322793-322898:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:333878-334030:1:exon

XP_015742309.1
type: Protein
SIO_000068: ncbiprotein

position:317348:1
position: 317348
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:334030:1
position: 334030
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317348-317538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322793-322898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324962-325092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325967-326024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326566-326616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327248-327340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328634-328762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329004-329110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330972-331128:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:333878-334030:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X2
translation: MAAAAVAAVRAWFWNERFWLPHNVTWADLAGEADGGLQYPRASHVLSAFPLALGIFAVRLLFERFIAKPCAINLGIQDSGAHRAQPNAILEKVFTSITKSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTITKFCESMWRFTFYLSIFLYGIRFLWTAPWFWDTRQCWYSYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQILHVIWSYLIVRTAYKALVRGK
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(317348..317538,322793..322898,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,332612..332614)
location: region:317348-332614:1
so has part: feature:317348-317538:1:exon
so has part: feature:322793-322898:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:332612-332614:1:exon

XP_015742310.1
type: Protein
SIO_000068: ncbiprotein

position:332614:1
position: 332614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:317348-317538:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:322793-322898:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:324962-325092:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:325967-326024:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:326566-326616:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:327248-327340:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:328634-328762:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:329004-329110:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:330972-331128:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:332612-332614:1:exon

CERS5
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: CERS5
product: ceramide synthase 5, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 45 samples with support for all annotated introns
transcript id: XM_032441087.1
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(322905..323402,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,333878..335184)
location: region:322905-335184:1
so has part: feature:322905-323402:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:333878-335184:1:exon

position:322905:1
position: 322905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:322905-323402:1:exon

position:323402:1
position: 323402
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:324962-325092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325967-326024:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326566-326616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:327248-327340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:328634-328762:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329004-329110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330972-331128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333878-335184:1:exon

CERS5
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: CERS5
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ceramide synthase 5 isoform X3
translation: MEARPDKCWDAECWQQSPDGKRLEGLSKQLDWDVRKIQRWFRHRRNQDKPTTITKFCESMWRFTFYLSIFLYGIRFLWTAPWFWDTRQCWYSYPFQPLTSRLYYYYILELAFYWSLMFSQFTDIKRKDFLIMFVHHLATIGLITFSYMNNMVRVGTLVLCLHDASDFLLEAAKLANYAKYQRLCDAFFMLFGVVFIVTRLGIYPFWILNTTLFESWELIGPYPSWWLFNGLLVTLQILHVIWSYLIVRTAYKALVRGKVSKDDRSDVESSSEEEDVTSNSTKGVFSTSSNGSNRINGHVAGGQWTEED
SIO_010081: CERS5
subclass of: SO_0000673
so part of: CERS5
location: join(323355..323402,324962..325092,325967..326024,326566..326616,327248..327340,328634..328762,329004..329110,330972..331128,333878..334030)
location: region:323355-334030:1
so has part: feature:323355-323402:1:exon
so has part: feature:324962-325092:1:exon
so has part: feature:325967-326024:1:exon
so has part: feature:326566-326616:1:exon
so has part: feature:327248-327340:1:exon
so has part: feature:328634-328762:1:exon
so has part: feature:329004-329110:1:exon
so has part: feature:330972-331128:1:exon
so has part: feature:333878-334030:1:exon

XP_032296978.1
type: Protein
SIO_000068: ncbiprotein

position:323355:1
position: 323355
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:323355-323402:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:324962-325092:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:325967-326024:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:326566-326616:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:327248-327340:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:328634-328762:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:329004-329110:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:330972-331128:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:333878-334030:1:exon

LOC107325706
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(336421..337037)
location: region:336421-337037:-1
so has part: feature:336421-337037:-1:exon
subclass of: SO_0000010

107325706
type: Gene
SIO_000068: ncbigene

position:336421:-1
position: 336421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:337037:-1
position: 337037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336421-337037:-1:exon

LOC107325706
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325706
product: cytochrome c oxidase assembly protein COX14
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_015886826.2
SIO_010081: LOC107325706
subclass of: SO_0000673
so part of: LOC107325706
location: complement(join(336421..336626,336701..337037))
location: region:336421-337037:-1
so has part: feature:336701-337037:-1:exon
so has part: feature:336421-336626:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:336701-337037:-1:exon

position:336701:-1
position: 336701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:336421-336626:-1:exon

position:336626:-1
position: 336626
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325706
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325706
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: cytochrome c oxidase assembly protein COX14
translation: MVSGKQLADFGYKAFSGSMMLLTVYGGYLCGVRAYRLLQNRRARQASTGPES
SIO_010081: LOC107325706
subclass of: SO_0000673
so part of: LOC107325706
location: complement(336460..336618)
location: region:336460-336618:-1
so has part: feature:336460-336618:-1:exon

XP_015742312.1
type: Protein
SIO_000068: ncbiprotein

position:336460:-1
position: 336460
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:336618:-1
position: 336618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:336460-336618:-1:exon

GPD1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(338201..342982)
location: region:338201-342982:-1
so has part: feature:338201-342982:-1:exon
subclass of: SO_0000010

107325705
type: Gene
SIO_000068: ncbigene

position:338201:-1
position: 338201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342982:-1
position: 342982
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:338201-342982:-1:exon

GPD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GPD1
product: glycerol-3-phosphate dehydrogenase 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 25 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 87 samples with support for all annotated introns
transcript id: XM_015886825.2
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(338201..339719,339892..339998,340166..340399,340678..340790,341503..341641,342002..342142,342561..342738,342844..342982))
location: region:338201-342982:-1
so has part: feature:342844-342982:-1:exon
so has part: feature:342561-342738:-1:exon
so has part: feature:342002-342142:-1:exon
so has part: feature:341503-341641:-1:exon
so has part: feature:340678-340790:-1:exon
so has part: feature:340166-340399:-1:exon
so has part: feature:339892-339998:-1:exon
so has part: feature:338201-339719:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:342844-342982:-1:exon

position:342844:-1
position: 342844
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:342561-342738:-1:exon

position:342561:-1
position: 342561
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342738:-1
position: 342738
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:342002-342142:-1:exon

position:342002:-1
position: 342002
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342142:-1
position: 342142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:341503-341641:-1:exon

position:341503:-1
position: 341503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:341641:-1
position: 341641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:340678-340790:-1:exon

position:340678:-1
position: 340678
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340790:-1
position: 340790
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:340166-340399:-1:exon

position:340166:-1
position: 340166
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:340399:-1
position: 340399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:339892-339998:-1:exon

position:339892:-1
position: 339892
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:339998:-1
position: 339998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:338201-339719:-1:exon

position:339719:-1
position: 339719
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

GPD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GPD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic
translation: MGGKKVCIVGSGNWGSAIAKIVGSNAARLGTFEKTVSMWVLEEEVGGRKLTEIINTEHENVKYLPGHKLPPNVVAEPDLVKACSGADILLFVVPHQFIGKVCDQIKAHVKKGAIGMSLIKGVDEGPDGLRLISDIIHEKLGIEMSVLMGANIANEVAEEKFCETTIGCKNAQYGQILKELMQTPNFRVTVVQEADTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMISFAKVFCKGPVTPTTFLESCGVADLITTCYGGRNRKVAEAFAKTGKSIEQLEKEMLNGQKLQGPQTSAELNRILKTKNMVDKFPLFTAVYQICYEGKPVSDVIKCLQNHPEHL
SIO_010081: GPD1
subclass of: SO_0000673
so part of: GPD1
location: complement(join(339623..339719,339892..339998,340166..340399,340678..340790,341503..341641,342002..342142,342561..342738,342844..342884))
location: region:339623-342884:-1
so has part: feature:342844-342884:-1:exon
so has part: feature:342561-342738:-1:exon
so has part: feature:342002-342142:-1:exon
so has part: feature:341503-341641:-1:exon
so has part: feature:340678-340790:-1:exon
so has part: feature:340166-340399:-1:exon
so has part: feature:339892-339998:-1:exon
so has part: feature:339623-339719:-1:exon

XP_015742311.1
type: Protein
SIO_000068: ncbiprotein

position:339623:-1
position: 339623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:342884:-1
position: 342884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:342844-342884:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:342561-342738:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:342002-342142:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:341503-341641:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:340678-340790:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:340166-340399:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:339892-339998:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:339623-339719:-1:exon

LOC116652460
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC116652460
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 340790..343874
location: region:340790-343874:1
so has part: feature:340790-343874:1:exon
subclass of: SO_0000011

116652460
type: Gene
SIO_000068: ncbigene

position:340790:1
position: 340790
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:343874:1
position: 343874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:340790-343874:1:exon

LOC116652460
type: Non Coding RNA
subclass of: SO_0000655
RO_0002162: 93934
nc RNA class: lncRNA
gene: LOC116652460
product: uncharacterized LOC116652460
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 ESTs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 14 samples with support for all annotated introns
transcript id: XR_004305478.1
SIO_010081: LOC116652460
subclass of: SO_0000673
so part of: LOC116652460
location: join(340790..341354,343597..343874)
location: region:340790-343874:1
so has part: feature:340790-341354:1:exon
so has part: feature:343597-343874:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:340790-341354:1:exon

position:341354:1
position: 341354
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:343597-343874:1:exon

position:343597:1
position: 343597
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

SMARCD1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(343668..350789)
location: region:343668-350789:-1
so has part: feature:343668-350789:-1:exon
subclass of: SO_0000010

107325703
type: Gene
SIO_000068: ncbigene

position:343668:-1
position: 343668
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350789:-1
position: 350789
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:343668-350789:-1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 35 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_015886817.2
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(343668..345343,345568..345669,345904..346056,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348447..348575,348845..348967,349065..349107,350278..350465,350586..350789))
location: region:343668-350789:-1
so has part: feature:350586-350789:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348447-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346056:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:343668-345343:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350789:-1:exon

position:350586:-1
position: 350586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

position:350278:-1
position: 350278
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350465:-1
position: 350465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

position:349065:-1
position: 349065
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:349107:-1
position: 349107
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

position:348845:-1
position: 348845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348967:-1
position: 348967
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:348447-348575:-1:exon

position:348447:-1
position: 348447
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:348575:-1
position: 348575
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

position:347843:-1
position: 347843
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347959:-1
position: 347959
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

position:347411:-1
position: 347411
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347512:-1
position: 347512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

position:347152:-1
position: 347152
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347313:-1
position: 347313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

position:346944:-1
position: 346944
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:347041:-1
position: 347041
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

position:346375:-1
position: 346375
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346510:-1
position: 346510
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346056:-1:exon

position:345904:-1
position: 345904
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:346056:-1
position: 346056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

position:345568:-1
position: 345568
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:345669:-1
position: 345669
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:343668-345343:-1:exon

position:345343:-1
position: 345343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 89 samples with support for all annotated introns
transcript id: XM_015886819.2
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(343668..345343,345568..345669,345904..346056,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348453..348575,348845..348967,349065..349107,350278..350465,350586..350788))
location: region:343668-350788:-1
so has part: feature:350586-350788:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348453-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346056:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:343668-345343:-1:exon

position:350788:-1
position: 350788
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350788:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348453-348575:-1:exon

position:348453:-1
position: 348453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343668-345343:-1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 36 ESTs, 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 117 samples with support for all annotated introns
transcript id: XM_015886820.2
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(343668..345343,345568..345669,345904..346026,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348447..348575,348845..348967,349065..349107,350278..350465,350586..350787))
location: region:343668-350787:-1
so has part: feature:350586-350787:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348447-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346026:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:343668-345343:-1:exon

position:350787:-1
position: 350787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350787:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348447-348575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346026:-1:exon

position:346026:-1
position: 346026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343668-345343:-1:exon

SMARCD1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SMARCD1
product: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 139 samples with support for all annotated introns
transcript id: XM_015886821.2
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(343668..345343,345568..345669,345904..346026,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348453..348575,348845..348967,349065..349107,350278..350465,350586..350786))
location: region:343668-350786:-1
so has part: feature:350586-350786:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348453-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346026:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:343668-345343:-1:exon

position:350786:-1
position: 350786
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350786:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348453-348575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:343668-345343:-1:exon

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X4
translation: MAARAGFQSVTPSGGGGGAATGTGALGPGTPGGPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSRLAPQGPSMGPPGYGGSPAVRPGMAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(345290..345343,345568..345669,345904..346026,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348453..348575,348845..348967,349065..349107,350278..350465,350586..350753))
location: region:345290-350753:-1
so has part: feature:350586-350753:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348453-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346026:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:345290-345343:-1:exon

XP_015742307.1
type: Protein
SIO_000068: ncbiprotein

position:345290:-1
position: 345290
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:350753:-1
position: 350753
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348453-348575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345290-345343:-1:exon

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X2
translation: MAARAGFQSVTPSGGGGGAATGTGALGPGTPGGPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSRLAPQGPSMGPPGYGGSPAVRPGMAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKQSRCCAYLLQIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(345290..345343,345568..345669,345904..346056,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348453..348575,348845..348967,349065..349107,350278..350465,350586..350753))
location: region:345290-350753:-1
so has part: feature:350586-350753:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348453-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346056:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:345290-345343:-1:exon

XP_015742305.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348453-348575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345290-345343:-1:exon

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X3
translation: MAARAGFQSVTPSGGGGGAATGTGALGPGTPGGPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSRLAPQGPSMGPPGYGGSPAVRPGMAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDVSSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(345290..345343,345568..345669,345904..346026,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348447..348575,348845..348967,349065..349107,350278..350465,350586..350753))
location: region:345290-350753:-1
so has part: feature:350586-350753:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348447-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346026:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:345290-345343:-1:exon

XP_015742306.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348447-348575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346026:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345290-345343:-1:exon

SMARCD1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SMARCD1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 isoform X1
translation: MAARAGFQSVTPSGGGGGAATGTGALGPGTPGGPVRMGPAPGQGLYRSPLPGAAYPRPGMLPGSRLAPQGPSMGPPGYGGSPAVRPGMAQAGLDQARKRPAPQQLQQVQPQAVPNRNHNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRKLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDVSSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPRLARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREYVICDKYLQQIFESQRMKFSEIPQRLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAALDNKQSRCCAYLLQIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
SIO_010081: SMARCD1
subclass of: SO_0000673
so part of: SMARCD1
location: complement(join(345290..345343,345568..345669,345904..346056,346375..346510,346944..347041,347152..347313,347411..347512,347843..347959,348447..348575,348845..348967,349065..349107,350278..350465,350586..350753))
location: region:345290-350753:-1
so has part: feature:350586-350753:-1:exon
so has part: feature:350278-350465:-1:exon
so has part: feature:349065-349107:-1:exon
so has part: feature:348845-348967:-1:exon
so has part: feature:348447-348575:-1:exon
so has part: feature:347843-347959:-1:exon
so has part: feature:347411-347512:-1:exon
so has part: feature:347152-347313:-1:exon
so has part: feature:346944-347041:-1:exon
so has part: feature:346375-346510:-1:exon
so has part: feature:345904-346056:-1:exon
so has part: feature:345568-345669:-1:exon
so has part: feature:345290-345343:-1:exon

XP_015742303.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:350586-350753:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:350278-350465:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:349065-349107:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:348845-348967:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:348447-348575:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:347843-347959:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:347411-347512:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:347152-347313:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:346944-347041:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:346375-346510:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:345904-346056:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:345568-345669:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:345290-345343:-1:exon

ASIC1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(354506..371619)
location: region:354506-371619:-1
so has part: feature:354506-371619:-1:exon
subclass of: SO_0000010

107325723
type: Gene
SIO_000068: ncbigene

position:354506:-1
position: 354506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:371619:-1
position: 371619
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:354506-371619:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_015886867.2
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(354506..356053,356188..356292,356421..356500,356717..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,369201..369396,370188..370582,371175..371611))
location: region:354506-371611:-1
so has part: feature:371175-371611:-1:exon
so has part: feature:370188-370582:-1:exon
so has part: feature:369201-369396:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356717-356808:-1:exon
so has part: feature:356421-356500:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:354506-356053:-1:exon

position:371611:-1
position: 371611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371175-371611:-1:exon

position:371175:-1
position: 371175
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370188-370582:-1:exon

position:370188:-1
position: 370188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370582:-1
position: 370582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:369201-369396:-1:exon

position:369201:-1
position: 369201
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:369396:-1
position: 369396
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:358109-358259:-1:exon

position:358109:-1
position: 358109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:358259:-1
position: 358259
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:357588-357715:-1:exon

position:357588:-1
position: 357588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357715:-1
position: 357715
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:357254-357404:-1:exon

position:357254:-1
position: 357254
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357404:-1
position: 357404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:357120-357176:-1:exon

position:357120:-1
position: 357120
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357176:-1
position: 357176
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:356884-357037:-1:exon

position:356884:-1
position: 356884
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:357037:-1
position: 357037
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:356717-356808:-1:exon

position:356717:-1
position: 356717
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356808:-1
position: 356808
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:356421-356500:-1:exon

position:356421:-1
position: 356421
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356500:-1
position: 356500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:356188-356292:-1:exon

position:356188:-1
position: 356188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:356292:-1
position: 356292
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:354506-356053:-1:exon

position:356053:-1
position: 356053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 55 samples with support for all annotated introns
transcript id: XM_032441085.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(355929..356053,356188..356292,356421..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,369201..369396,370188..370582,371175..371619))
location: region:355929-371619:-1
so has part: feature:371175-371619:-1:exon
so has part: feature:370188-370582:-1:exon
so has part: feature:369201-369396:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356421-356808:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:355929-356053:-1:exon

position:355929:-1
position: 355929
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:371175-371619:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:370188-370582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:369201-369396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358109-358259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357588-357715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357254-357404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357120-357176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356884-357037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356421-356808:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356188-356292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355929-356053:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 37 samples with support for all annotated introns
transcript id: XM_032441086.1
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(355929..356053,356188..356292,356421..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,369201..369396,370188..370582,370958..371086))
location: region:355929-371086:-1
so has part: feature:370958-371086:-1:exon
so has part: feature:370188-370582:-1:exon
so has part: feature:369201-369396:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356421-356808:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:355929-356053:-1:exon

position:371086:-1
position: 371086
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370958-371086:-1:exon

position:370958:-1
position: 370958
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:370188-370582:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:369201-369396:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:358109-358259:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357588-357715:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357254-357404:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:357120-357176:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356884-357037:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356421-356808:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356188-356292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355929-356053:-1:exon

ASIC1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ASIC1
product: acid sensing ion channel subunit 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 34 samples with support for all annotated introns
transcript id: XM_015886866.2
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(355929..356053,356188..356292,356421..356500,356717..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,359097..360017))
location: region:355929-360017:-1
so has part: feature:359097-360017:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356717-356808:-1:exon
so has part: feature:356421-356500:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:355929-356053:-1:exon

position:360017:-1
position: 360017
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359097-360017:-1:exon

position:359097:-1
position: 359097
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:358109-358259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357588-357715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357254-357404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357120-357176:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356884-357037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356717-356808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356421-356500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356188-356292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355929-356053:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X3
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGISHIFSYERLSLKRVVWALCFMGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCSPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPYIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(355949..356053,356188..356292,356421..356500,356717..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,369201..369396,370188..370552))
location: region:355949-370552:-1
so has part: feature:370188-370552:-1:exon
so has part: feature:369201-369396:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356717-356808:-1:exon
so has part: feature:356421-356500:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:355949-356053:-1:exon

XP_015742353.1
type: Protein
SIO_000068: ncbiprotein

position:355949:-1
position: 355949
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:370552:-1
position: 370552
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:370188-370552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369201-369396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358109-358259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357588-357715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357254-357404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357120-357176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356884-357037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356717-356808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356421-356500:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:356188-356292:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:355949-356053:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X1
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGISHIFSYERLSLKRVVWALCFMGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCSPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPYIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGEHCGLVAVLRALVGTLQCGPMCCHPNPGAPGCAHSVGAEQSSPQSHSSDEVCPFSAPSASSALLIAFLSPPGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(355949..356053,356188..356292,356421..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,369201..369396,370188..370552))
location: region:355949-370552:-1
so has part: feature:370188-370552:-1:exon
so has part: feature:369201-369396:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356421-356808:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:355949-356053:-1:exon

XP_032296976.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370188-370552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369201-369396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358109-358259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357588-357715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357254-357404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357120-357176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356884-357037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356421-356808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356188-356292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355949-356053:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X1
translation: MMDLKVDEEEVDSGQPVSIQAFASSSTLHGISHIFSYERLSLKRVVWALCFMGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRLTFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNMLEFYDRAGHDIREMLLSCFFRGEQCSPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPYIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGEHCGLVAVLRALVGTLQCGPMCCHPNPGAPGCAHSVGAEQSSPQSHSSDEVCPFSAPSASSALLIAFLSPPGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(355949..356053,356188..356292,356421..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,369201..369396,370188..370552))
location: region:355949-370552:-1
so has part: feature:370188-370552:-1:exon
so has part: feature:369201-369396:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356421-356808:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:355949-356053:-1:exon

XP_032296977.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:370188-370552:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:369201-369396:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:358109-358259:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357588-357715:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357254-357404:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:357120-357176:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356884-357037:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356421-356808:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356188-356292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355949-356053:-1:exon

ASIC1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ASIC1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: acid-sensing ion channel 1 isoform X2
translation: MPLQIFCTISFSSEEAPRDATAAGRGENGADEFLYGQEEEEEEEEDTGAATDFVAFASSCTLHGLSHIFVEGSLGARQALWALAFLLSLSVFLYQVADRIVYYLEYHHVTLLSEEDSPEMTFPAVTFCNINRVRVSQLSHEDLLYLAPLVDYEPGMELGFVPAQFSSWDEDEPLNLHGFFNRTCHQLEDMLLSCSYRGEQCGPGDFVAVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPYIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTGDSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPCNVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGGQMGLFIGASILTVLELFDYAYEVIKHRLCRRGKCRKNHKRNNTDKGVALSMDDVKRHNPCESLRGHPAGMTYAANILPHHPARGTFEDFTC
SIO_010081: ASIC1
subclass of: SO_0000673
so part of: ASIC1
location: complement(join(355949..356053,356188..356292,356421..356500,356717..356808,356884..357037,357120..357176,357254..357404,357588..357715,358109..358259,359097..359720))
location: region:355949-359720:-1
so has part: feature:359097-359720:-1:exon
so has part: feature:358109-358259:-1:exon
so has part: feature:357588-357715:-1:exon
so has part: feature:357254-357404:-1:exon
so has part: feature:357120-357176:-1:exon
so has part: feature:356884-357037:-1:exon
so has part: feature:356717-356808:-1:exon
so has part: feature:356421-356500:-1:exon
so has part: feature:356188-356292:-1:exon
so has part: feature:355949-356053:-1:exon

XP_015742352.1
type: Protein
SIO_000068: ncbiprotein

position:359720:-1
position: 359720
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:359097-359720:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:358109-358259:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:357588-357715:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:357254-357404:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:357120-357176:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:356884-357037:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:356717-356808:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:356421-356500:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:356188-356292:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:355949-356053:-1:exon

RACGAP1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 384141..391976
location: region:384141-391976:1
so has part: feature:384141-391976:1:exon
subclass of: SO_0000010

107325722
type: Gene
SIO_000068: ncbigene

position:384141:1
position: 384141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391976:1
position: 391976
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384141-391976:1:exon

RACGAP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 73 samples with support for all annotated introns
transcript id: XR_001559752.1
SIO_010081: RACGAP1
so part of: RACGAP1
location: join(384141..384245,385361..385449,385871..386073,386401..386537,386740..386809,387018..387071,387353..387430,387564..387681,387863..387993,388413..388577,388952..389047,389268..389466,389763..389868,390026..390158,390305..390814,391134..391976)
location: region:384141-391976:1
so has part: feature:384141-384245:1:exon
so has part: feature:385361-385449:1:exon
so has part: feature:385871-386073:1:exon
so has part: feature:386401-386537:1:exon
so has part: feature:386740-386809:1:exon
so has part: feature:387018-387071:1:exon
so has part: feature:387353-387430:1:exon
so has part: feature:387564-387681:1:exon
so has part: feature:387863-387993:1:exon
so has part: feature:388413-388577:1:exon
so has part: feature:388952-389047:1:exon
so has part: feature:389268-389466:1:exon
so has part: feature:389763-389868:1:exon
so has part: feature:390026-390158:1:exon
so has part: feature:390305-390814:1:exon
so has part: feature:391134-391976:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:384141-384245:1:exon

position:384245:1
position: 384245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385361-385449:1:exon

position:385361:1
position: 385361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:385449:1
position: 385449
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:385871-386073:1:exon

position:385871:1
position: 385871
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386073:1
position: 386073
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:386401-386537:1:exon

position:386401:1
position: 386401
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386537:1
position: 386537
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:386740-386809:1:exon

position:386740:1
position: 386740
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:386809:1
position: 386809
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:387018-387071:1:exon

position:387018:1
position: 387018
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387071:1
position: 387071
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:387353-387430:1:exon

position:387353:1
position: 387353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387430:1
position: 387430
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:387564-387681:1:exon

position:387564:1
position: 387564
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387681:1
position: 387681
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:387863-387993:1:exon

position:387863:1
position: 387863
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:387993:1
position: 387993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:388413-388577:1:exon

position:388413:1
position: 388413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:388577:1
position: 388577
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:388952-389047:1:exon

position:388952:1
position: 388952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389047:1
position: 389047
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:389268-389466:1:exon

position:389268:1
position: 389268
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389466:1
position: 389466
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:389763-389868:1:exon

position:389763:1
position: 389763
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:389868:1
position: 389868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:390026-390158:1:exon

position:390026:1
position: 390026
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390158:1
position: 390158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:390305-390814:1:exon

position:390305:1
position: 390305
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:390814:1
position: 390814
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:391134-391976:1:exon

position:391134:1
position: 391134
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RACGAP1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 23 ESTs, 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XR_001559751.2
SIO_010081: RACGAP1
so part of: RACGAP1
location: join(384993..385094,385361..385449,385871..386073,386401..386537,386740..386809,387018..387071,387353..387430,387564..387681,387863..387993,388413..388577,388952..389047,389268..389466,389763..389868,390026..390158,390305..390814,391134..391976)
location: region:384993-391976:1
so has part: feature:384993-385094:1:exon
so has part: feature:385361-385449:1:exon
so has part: feature:385871-386073:1:exon
so has part: feature:386401-386537:1:exon
so has part: feature:386740-386809:1:exon
so has part: feature:387018-387071:1:exon
so has part: feature:387353-387430:1:exon
so has part: feature:387564-387681:1:exon
so has part: feature:387863-387993:1:exon
so has part: feature:388413-388577:1:exon
so has part: feature:388952-389047:1:exon
so has part: feature:389268-389466:1:exon
so has part: feature:389763-389868:1:exon
so has part: feature:390026-390158:1:exon
so has part: feature:390305-390814:1:exon
so has part: feature:391134-391976:1:exon

position:384993:1
position: 384993
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384993-385094:1:exon

position:385094:1
position: 385094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:385361-385449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385871-386073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386401-386537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386740-386809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387018-387071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387353-387430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387564-387681:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387863-387993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388413-388577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:388952-389047:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:389268-389466:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:389763-389868:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390026-390158:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390305-390814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:391134-391976:1:exon

RACGAP1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: RACGAP1
product: Rac GTPase activating protein 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 ESTs, 14 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 47 samples with support for all annotated introns
transcript id: XM_015886865.2
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(384999..385094,385361..385449,385871..386073,386401..386537,386740..386809,387018..387071,387353..387430,387564..387681,387863..387993,388413..388577,388952..389047,389268..389466,389763..389868,390026..390158,390305..390440,390709..390814,391134..391976)
location: region:384999-391976:1
so has part: feature:384999-385094:1:exon
so has part: feature:385361-385449:1:exon
so has part: feature:385871-386073:1:exon
so has part: feature:386401-386537:1:exon
so has part: feature:386740-386809:1:exon
so has part: feature:387018-387071:1:exon
so has part: feature:387353-387430:1:exon
so has part: feature:387564-387681:1:exon
so has part: feature:387863-387993:1:exon
so has part: feature:388413-388577:1:exon
so has part: feature:388952-389047:1:exon
so has part: feature:389268-389466:1:exon
so has part: feature:389763-389868:1:exon
so has part: feature:390026-390158:1:exon
so has part: feature:390305-390440:1:exon
so has part: feature:390709-390814:1:exon
so has part: feature:391134-391976:1:exon

position:384999:1
position: 384999
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:384999-385094:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385361-385449:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:385871-386073:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386401-386537:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:386740-386809:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387018-387071:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387353-387430:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387564-387681:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:387863-387993:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388413-388577:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:388952-389047:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:389268-389466:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:389763-389868:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390026-390158:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390305-390440:1:exon

position:390440:1
position: 390440
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:390709-390814:1:exon

position:390709:1
position: 390709
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:391134-391976:1:exon

RACGAP1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: RACGAP1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: rac GTPase-activating protein 1
translation: MDTTMRNLWNLCDQLIRQAEVLSEGNECQFIQLAKNFEDYRRKWQKTEQELGRYKDLLMKSEAERSALDVKLKHARNQVDVEIKRRQKAEADCDRLERQIQLIRELLMCDASGSIQLSEEQKSALAFLNKPQVSVGGSGNKRLSTIDESGSILSDISFDKTDDSLDWDSSAVKTVRLKRREKRRSSRQHAEGPPAPEKKIRSIGSTADQGNESIVAKTTFMVPSDGGPIEAISTIQTVPYSLRSQRKSGPLQPWSSETSLGFKQVESKSESNGSVTPQSNGGVRLHDFVSKTVIKPESCVPCGKRVKFGKISLKCRDCHVVSHPECRDRCPLPCIPTLTGPPVKIGEGTLMDFVPSAPPMIPSIIVHCVNEIEQRGLNEKGLYRISGCDKTVRELKEKFLRSKNIPSLSNVDDIHAICGLLKDFLRNLKEPLLTFRLNKTFMEAAEILDEDNSIAAMYQAVGELPRANRDTLAFLMVHLQRVAQSPDTKMDVTNLAKVFGPTIVAHAVPDPDPMTLLQDTKRQPKVVERLLLMPMEYWSQLMMLEQENIDPAHVIENTNAYSTPQTPDVKECIFEPLTTPERQMYRRMSSSSLCQKVLSTFSMTPKSASKCKSATQLRRQGRFFPSPVLK
SIO_010081: RACGAP1
subclass of: SO_0000673
so part of: RACGAP1
location: join(385365..385449,385871..386073,386401..386537,386740..386809,387018..387071,387353..387430,387564..387681,387863..387993,388413..388577,388952..389047,389268..389466,389763..389868,390026..390158,390305..390440,390709..390814,391134..391209)
location: region:385365-391209:1
so has part: feature:385365-385449:1:exon
so has part: feature:385871-386073:1:exon
so has part: feature:386401-386537:1:exon
so has part: feature:386740-386809:1:exon
so has part: feature:387018-387071:1:exon
so has part: feature:387353-387430:1:exon
so has part: feature:387564-387681:1:exon
so has part: feature:387863-387993:1:exon
so has part: feature:388413-388577:1:exon
so has part: feature:388952-389047:1:exon
so has part: feature:389268-389466:1:exon
so has part: feature:389763-389868:1:exon
so has part: feature:390026-390158:1:exon
so has part: feature:390305-390440:1:exon
so has part: feature:390709-390814:1:exon
so has part: feature:391134-391209:1:exon

XP_015742351.1
type: Protein
SIO_000068: ncbiprotein

position:385365:1
position: 385365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:391209:1
position: 391209
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:385365-385449:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:385871-386073:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:386401-386537:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:386740-386809:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:387018-387071:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:387353-387430:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:387564-387681:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:387863-387993:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:388413-388577:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:388952-389047:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:389268-389466:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:389763-389868:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:390026-390158:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:390305-390440:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:390709-390814:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:391134-391209:1:exon

HDAC7
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 403818..460106
location: region:403818-460106:1
so has part: feature:403818-460106:1:exon
subclass of: SO_0000010

107325714
type: Gene
SIO_000068: ncbigene

position:403818:1
position: 403818
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:460106:1
position: 460106
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403818-460106:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_015886849.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(403818..404310,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:403818-460106:1
so has part: feature:403818-404310:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:403818-404310:1:exon

position:404310:1
position: 404310
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

position:448505:1
position: 448505
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:448701:1
position: 448701
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

position:449398:1
position: 449398
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:449488:1
position: 449488
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

position:450245:1
position: 450245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450359:1
position: 450359
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

position:450506:1
position: 450506
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450621:1
position: 450621
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

position:450777:1
position: 450777
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:450899:1
position: 450899
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

position:451373:1
position: 451373
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451482:1
position: 451482
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

position:451831:1
position: 451831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:451947:1
position: 451947
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

position:452128:1
position: 452128
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452326:1
position: 452326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

position:452490:1
position: 452490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:452698:1
position: 452698
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

position:452952:1
position: 452952
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453155:1
position: 453155
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

position:453695:1
position: 453695
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:453920:1
position: 453920
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

position:454360:1
position: 454360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454493:1
position: 454493
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

position:454878:1
position: 454878
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:454998:1
position: 454998
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

position:455094:1
position: 455094
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:455143:1
position: 455143
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

position:456377:1
position: 456377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456484:1
position: 456484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

position:456600:1
position: 456600
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456655:1
position: 456655
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

position:456877:1
position: 456877
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:456964:1
position: 456964
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

position:457244:1
position: 457244
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457363:1
position: 457363
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

position:457683:1
position: 457683
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457780:1
position: 457780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

position:457874:1
position: 457874
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:457992:1
position: 457992
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

position:458160:1
position: 458160
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458293:1
position: 458293
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

position:458497:1
position: 458497
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458581:1
position: 458581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

position:458785:1
position: 458785
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:458923:1
position: 458923
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:459243-460106:1:exon

position:459243:1
position: 459243
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X6
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_015886853.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(403820..404310,424280..424350,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:403820-460106:1
so has part: feature:403820-404310:1:exon
so has part: feature:424280-424350:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

position:403820:1
position: 403820
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:403820-404310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:424280-424350:1:exon

position:424280:1
position: 424280
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:424350:1
position: 424350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X4
translation: MQGQSHAAVTPCTSPRVPQAVPMDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(404292..404310,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:404292-459288:1
so has part: feature:404292-404310:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742335.1
type: Protein
SIO_000068: ncbiprotein

position:404292:1
position: 404292
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:459288:1
position: 459288
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:404292-404310:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X9
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns
transcript id: XM_015886856.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(418142..418229,424280..424350,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:418142-460106:1
so has part: feature:418142-418229:1:exon
so has part: feature:424280-424350:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

position:418142:1
position: 418142
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418142-418229:1:exon

position:418229:1
position: 418229
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424280-424350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns
transcript id: XM_015886848.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(418190..418229,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:418190-460106:1
so has part: feature:418190-418229:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

position:418190:1
position: 418190
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418190-418229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X3
translation: MLSKRTTKAAVTPCTSPRVPQAVPMDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(418205..418229,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:418205-459288:1
so has part: feature:418205-418229:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742334.1
type: Protein
SIO_000068: ncbiprotein

position:418205:1
position: 418205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:418205-418229:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X8
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XM_015886855.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(422130..422413,424280..424350,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:422130-460106:1
so has part: feature:422130-422413:1:exon
so has part: feature:424280-424350:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

position:422130:1
position: 422130
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422130-422413:1:exon

position:422413:1
position: 422413
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:424280-424350:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X5
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 82 samples with support for all annotated introns
transcript id: XM_015886852.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(422139..422413,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:422139-460106:1
so has part: feature:422139-422413:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

position:422139:1
position: 422139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:422139-422413:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 67 samples with support for all annotated introns
transcript id: XM_032441076.1
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(424280..424350,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:424280-460106:1
so has part: feature:424280-424350:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:424280-424350:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 29 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 51 samples with support for all annotated introns
transcript id: XM_015886846.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(427109..427843,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:427109-460106:1
so has part: feature:427109-427843:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

position:427109:1
position: 427109
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427109-427843:1:exon

position:427843:1
position: 427843
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X2
translation: MRSGGFPGAELAGCSQPQGTALTLSAALVMFSPSSAVTPCTSPRVPQAVPMDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(427741..427843,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:427741-459288:1
so has part: feature:427741-427843:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742332.1
type: Protein
SIO_000068: ncbiprotein

position:427741:1
position: 427741
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:427741-427843:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: HDAC7
product: histone deacetylase 7, transcript variant X7
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 27 ESTs, 10 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_015886854.2
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(440746..442158,448505..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..460106)
location: region:440746-460106:1
so has part: feature:440746-442158:1:exon
so has part: feature:448505-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-460106:1:exon

position:440746:1
position: 440746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:440746-442158:1:exon

position:442158:1
position: 442158
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:448505-448701:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:459243-460106:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X5
translation: MDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(448552..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:448552-459288:1
so has part: feature:448552-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742338.1
type: Protein
SIO_000068: ncbiprotein

position:448552:1
position: 448552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:448552-448701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X5
translation: MDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(448552..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:448552-459288:1
so has part: feature:448552-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742339.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448552-448701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X5
translation: MDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(448552..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:448552-459288:1
so has part: feature:448552-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742340.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448552-448701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X5
translation: MDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(448552..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:448552-459288:1
so has part: feature:448552-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742341.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448552-448701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X5
translation: MDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEAPLAQRLMMQESSLAQFALQSAVSLPAITLGLPATTSARGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(448552..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,451831..451947,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:448552-459288:1
so has part: feature:448552-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:451831-451947:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_015742342.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448552-448701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:451831-451947:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:459243-459288:1:exon

HDAC7
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: HDAC7
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone deacetylase 7 isoform X1
translation: MDLRIGQRVVKPGSDTALLALKHTQQLQHQLFLASLHQQQVEQLAHQHVRVTMETSHREAEPGQQEQELRQILNKDKSKRSAVASTVVKQKLAEVILKKQQAAALERTSNPNPPAMPYRTLEPLDPEGPSPPVLSTFLSPVPSTSLDPPEHFPLRKTASEPNLKVRCKPRKCLDRRKNPLTRKESAPPSLKRRPPETIDSSPSSSSTPVSGCSSPNDSLPAEHGALPTASSMAHEGDGDRRSLSGLAHRVPVLNGPVLTGTHSPMFFPAGLEQHEAGNPLSPRLQPVIILEPSVTHTPLVAVPGLGTVPFSFAPSLISTERLSLPGHHKPLGRTRSEPLPQNPKAIQQQLVYQQHHAQFLERLKQQTHLGKRMVKTSEKPRLRQIPSSEDMEAEGMEAGAESSEQARAHVEPARPGSSGKEPERPQKMLQPQEELILQQAYLWDPYPRVQHQLLKRQPLADSTMVPTVLAGHRPLSRAQSSPATATVSLPAQDTTSKALSLPVQEQTSKPHFTTGLVYDSVMLKHQCSCGDNSNHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHVFLYGTNPLNRLKLDNGKLAGILSQRMFVMLPCGGVGVDSDTIWNELHSSNAARWAAGSVTELAFKVASRELKNGFAVVRPPGHHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDVHHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNVAWTGGLDPPMGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVSAKCFGYLTKQLMSLAGGRVVLALEGGHDLTAICDASEACVSALLGNELDPLPEESMRQKPNANAVRSLEAVIQVQSKYWVAVQRFASKLGCSFLEAQHHEAEEVETVTALASLSVAVMVEKRPQDEPMEEEEPMNQ
SIO_010081: HDAC7
subclass of: SO_0000673
so part of: HDAC7
location: join(448552..448701,449398..449488,450245..450359,450506..450621,450777..450899,451373..451482,452128..452326,452490..452698,452952..453155,453695..453920,454360..454493,454878..454998,455094..455143,456377..456484,456600..456655,456877..456964,457244..457363,457683..457780,457874..457992,458160..458293,458497..458581,458785..458923,459243..459288)
location: region:448552-459288:1
so has part: feature:448552-448701:1:exon
so has part: feature:449398-449488:1:exon
so has part: feature:450245-450359:1:exon
so has part: feature:450506-450621:1:exon
so has part: feature:450777-450899:1:exon
so has part: feature:451373-451482:1:exon
so has part: feature:452128-452326:1:exon
so has part: feature:452490-452698:1:exon
so has part: feature:452952-453155:1:exon
so has part: feature:453695-453920:1:exon
so has part: feature:454360-454493:1:exon
so has part: feature:454878-454998:1:exon
so has part: feature:455094-455143:1:exon
so has part: feature:456377-456484:1:exon
so has part: feature:456600-456655:1:exon
so has part: feature:456877-456964:1:exon
so has part: feature:457244-457363:1:exon
so has part: feature:457683-457780:1:exon
so has part: feature:457874-457992:1:exon
so has part: feature:458160-458293:1:exon
so has part: feature:458497-458581:1:exon
so has part: feature:458785-458923:1:exon
so has part: feature:459243-459288:1:exon

XP_032296967.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:448552-448701:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:449398-449488:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:450245-450359:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:450506-450621:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:450777-450899:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:451373-451482:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:452128-452326:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:452490-452698:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:452952-453155:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:453695-453920:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:454360-454493:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:454878-454998:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:455094-455143:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:456377-456484:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:456600-456655:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:456877-456964:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:457244-457363:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:457683-457780:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:457874-457992:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:458160-458293:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:458497-458581:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:458785-458923:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:459243-459288:1:exon

LOC107325715
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(462267..463746)
location: region:462267-463746:-1
so has part: feature:462267-463746:-1:exon
subclass of: SO_0000010

107325715
type: Gene
SIO_000068: ncbigene

position:462267:-1
position: 462267
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463746:-1
position: 463746
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:462267-463746:-1:exon

LOC107325715
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325715
product: twist-related protein 2-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 10 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 12 samples with support for all annotated introns
transcript id: XM_032441077.1
SIO_010081: LOC107325715
subclass of: SO_0000673
so part of: LOC107325715
location: complement(join(462267..462505,463050..463746))
location: region:462267-463746:-1
so has part: feature:463050-463746:-1:exon
so has part: feature:462267-462505:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:463050-463746:-1:exon

position:463050:-1
position: 463050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:462267-462505:-1:exon

position:462505:-1
position: 462505
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325715
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325715
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: twist-related protein 2-like
translation: MKEENMCPESPEGSLVTSEEEGERLHKKCLRKRGQAGKALEDGRATSPQGKRCKRSPVPQSFEDVHTQRVIANVRERQRTQSLNDAFAELRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDELDHKITSCNYLAHERLSYAFSVWRMEGAWSMSASH
SIO_010081: LOC107325715
subclass of: SO_0000673
so part of: LOC107325715
location: complement(463056..463541)
location: region:463056-463541:-1
so has part: feature:463056-463541:-1:exon

XP_032296968.1
type: Protein
SIO_000068: ncbiprotein

position:463056:-1
position: 463056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:463541:-1
position: 463541
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:463056-463541:-1:exon

SLC48A1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(474347..484044)
location: region:474347-484044:-1
so has part: feature:474347-484044:-1:exon
subclass of: SO_0000010

107325720
type: Gene
SIO_000068: ncbigene

position:474347:-1
position: 474347
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484044:-1
position: 484044
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:474347-484044:-1:exon

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SLC48A1
product: solute carrier family 48 member 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 ESTs, 6 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_015886862.2
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(474347..475781,476164..476331,483865..484044))
location: region:474347-484044:-1
so has part: feature:483865-484044:-1:exon
so has part: feature:476164-476331:-1:exon
so has part: feature:474347-475781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483865-484044:-1:exon

position:483865:-1
position: 483865
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:476164-476331:-1:exon

position:476164:-1
position: 476164
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:476331:-1
position: 476331
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474347-475781:-1:exon

position:475781:-1
position: 475781
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

SLC48A1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: SLC48A1
product: solute carrier family 48 member 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 ESTs, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 171 samples with support for all annotated introns
transcript id: XM_015886861.2
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(474347..475781,476164..476334,483865..484044))
location: region:474347-484044:-1
so has part: feature:483865-484044:-1:exon
so has part: feature:476164-476334:-1:exon
so has part: feature:474347-475781:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:483865-484044:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476164-476334:-1:exon

position:476334:-1
position: 476334
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:474347-475781:-1:exon

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1 isoform X2
translation: MAVSRALAVRLAYSAAGALMGFSAFFTWSLAPKFRQPATAAAGGLSGVLALWALITHVMYVQDYWRTWLKGLRFFLFIGILFSALSMVGFCTFLVLAITQHQSLTDPRSFYLSCVWSFISLKWAFLLSLYSYRYRNEFADISILSDF
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(475645..475781,476164..476331,483865..484003))
location: region:475645-484003:-1
so has part: feature:483865-484003:-1:exon
so has part: feature:476164-476331:-1:exon
so has part: feature:475645-475781:-1:exon

XP_015742348.1
type: Protein
SIO_000068: ncbiprotein

position:475645:-1
position: 475645
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:484003:-1
position: 484003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:483865-484003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476164-476331:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475645-475781:-1:exon

SLC48A1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: SLC48A1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: heme transporter HRG1 isoform X1
translation: MAVSRALAVRLAYSAAGALMGFSAFFTWSLAPKFRQPATAAAGGLSAGVLALWALITHVMYVQDYWRTWLKGLRFFLFIGILFSALSMVGFCTFLVLAITQHQSLTDPRSFYLSCVWSFISLKWAFLLSLYSYRYRNEFADISILSDF
SIO_010081: SLC48A1
subclass of: SO_0000673
so part of: SLC48A1
location: complement(join(475645..475781,476164..476334,483865..484003))
location: region:475645-484003:-1
so has part: feature:483865-484003:-1:exon
so has part: feature:476164-476334:-1:exon
so has part: feature:475645-475781:-1:exon

XP_015742347.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:483865-484003:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:476164-476334:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:475645-475781:-1:exon

RAPGEF3
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: RAPGEF3
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 494854..509028
location: region:494854-509028:1
so has part: feature:494854-509028:1:exon
subclass of: SO_0000010

107325717
type: Gene
SIO_000068: ncbigene

position:494854:1
position: 494854
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:509028:1
position: 509028
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494854-509028:1:exon

RAPGEF3
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: RAPGEF3
product: Rap guanine nucleotide exchange factor 3
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 ESTs, 12 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 79 samples with support for all annotated introns
transcript id: XM_015886859.2
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(494854..495212,499842..499895,500139..500245,500360..500481,500559..500733,501462..501546,501720..501780,502019..502095,502216..502361,503070..503179,503289..503377,503745..503823,504046..504196,504286..504362,504902..504941,505029..505110,505204..505350,505428..505525,506049..506174,506258..506439,506515..506605,507197..507247,507521..507608,507691..507755,507919..507973,508062..508133,508713..509028)
location: region:494854-509028:1
so has part: feature:494854-495212:1:exon
so has part: feature:499842-499895:1:exon
so has part: feature:500139-500245:1:exon
so has part: feature:500360-500481:1:exon
so has part: feature:500559-500733:1:exon
so has part: feature:501462-501546:1:exon
so has part: feature:501720-501780:1:exon
so has part: feature:502019-502095:1:exon
so has part: feature:502216-502361:1:exon
so has part: feature:503070-503179:1:exon
so has part: feature:503289-503377:1:exon
so has part: feature:503745-503823:1:exon
so has part: feature:504046-504196:1:exon
so has part: feature:504286-504362:1:exon
so has part: feature:504902-504941:1:exon
so has part: feature:505029-505110:1:exon
so has part: feature:505204-505350:1:exon
so has part: feature:505428-505525:1:exon
so has part: feature:506049-506174:1:exon
so has part: feature:506258-506439:1:exon
so has part: feature:506515-506605:1:exon
so has part: feature:507197-507247:1:exon
so has part: feature:507521-507608:1:exon
so has part: feature:507691-507755:1:exon
so has part: feature:507919-507973:1:exon
so has part: feature:508062-508133:1:exon
so has part: feature:508713-509028:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:494854-495212:1:exon

position:495212:1
position: 495212
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:499842-499895:1:exon

position:499842:1
position: 499842
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:499895:1
position: 499895
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:500139-500245:1:exon

position:500139:1
position: 500139
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500245:1
position: 500245
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:500360-500481:1:exon

position:500360:1
position: 500360
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500481:1
position: 500481
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:500559-500733:1:exon

position:500559:1
position: 500559
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:500733:1
position: 500733
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:501462-501546:1:exon

position:501462:1
position: 501462
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501546:1
position: 501546
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:501720-501780:1:exon

position:501720:1
position: 501720
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:501780:1
position: 501780
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:502019-502095:1:exon

position:502019:1
position: 502019
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502095:1
position: 502095
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:502216-502361:1:exon

position:502216:1
position: 502216
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:502361:1
position: 502361
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:503070-503179:1:exon

position:503070:1
position: 503070
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503179:1
position: 503179
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:503289-503377:1:exon

position:503289:1
position: 503289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503377:1
position: 503377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:503745-503823:1:exon

position:503745:1
position: 503745
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:503823:1
position: 503823
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:504046-504196:1:exon

position:504046:1
position: 504046
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504196:1
position: 504196
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:504286-504362:1:exon

position:504286:1
position: 504286
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504362:1
position: 504362
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:504902-504941:1:exon

position:504902:1
position: 504902
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:504941:1
position: 504941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:505029-505110:1:exon

position:505029:1
position: 505029
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505110:1
position: 505110
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:505204-505350:1:exon

position:505204:1
position: 505204
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505350:1
position: 505350
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:505428-505525:1:exon

position:505428:1
position: 505428
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:505525:1
position: 505525
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:506049-506174:1:exon

position:506049:1
position: 506049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506174:1
position: 506174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:506258-506439:1:exon

position:506258:1
position: 506258
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506439:1
position: 506439
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:506515-506605:1:exon

position:506515:1
position: 506515
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:506605:1
position: 506605
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:507197-507247:1:exon

position:507197:1
position: 507197
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507247:1
position: 507247
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:507521-507608:1:exon

position:507521:1
position: 507521
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507608:1
position: 507608
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:507691-507755:1:exon

position:507691:1
position: 507691
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507755:1
position: 507755
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:507919-507973:1:exon

position:507919:1
position: 507919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:507973:1
position: 507973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:508062-508133:1:exon

position:508062:1
position: 508062
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508133:1
position: 508133
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:508713-509028:1:exon

position:508713:1
position: 508713
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

RAPGEF3
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: RAPGEF3
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: inserted 1 base in 1 codon; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 3
translation: MKVRGAGTATATGTGTGIGSGGETERRGAAPVGTHCQRTGLERCTGAVAPSTPPLSPGGSGGDGKKLSVLLKKMHLFRSSSYEIRLEGEGGSLPRIQGIRWTPRLDAESSLDYGHSLTQASSDKIRRAGKLLFTYLTNTSPSLIRDHKHHLRHHRRCCSGKELVDWMLNAELGIQTRSQAIGVGQVLVDGGVLTHVKQEWHFQDKDTQFYRFAELELSPEPRMGLRDAEELLEAVTFLVQLGPDALLTMALRKAPAQRTEDELELIFEELLHIKAVAHLSNSVKRELASVLMFESHQRAGTVLFSQGDKGTSWYIVWKGSVNVVTHGKGLVATLHEGDDFGXLALVNDAPRAASIILREDNCHFLRVDKQDFNRILKDVEANTMRLKEHGKVVLVLQKNLQGGSSQPASMRSSRYLVMAGTPEKILEHLLEFMRLDATLYDPVDTLLGDFLLTYTVFMPTSQLCRALLHHFRAEPLDGSEQEKASYCLHKRRKILRLVSQWVLLYGRLLQGDRSTTALLQNLADLVSQDPRLGAMVQEQERRRPRAMENGDSSISPQPKSRSSMSWLSSQDEAALNSSCALRAQDKVPYEIYRADHSCLVTVLPVNASVRDVLQSLTPQLGWDGEHLLVKVNSSGDKVGLQLDAVGVFTSLGLNERLFAVSMEELGGLTPHPEQLGPHIGSSDTLDLISSKDLASHLTDYDWNLFKSIHQVEMIHYIVGPQKFHEVTTANLERMMRRFNELQYWVATELCLCNELGRRAQLLRKFIKLAAHLKEQKNLNSFFAVMFGVSNTAVSRLAKTWERLPHKIRKLHSALERMLDPSWNHRVYRLAVAKLSPPIIPFIPLLLKDMTFIHEGNRTLAENLINFEKMHMMAKTVRILQRCRGQAHAPLSPLRTRSPHRPEDARAVRISTCSEQSLSVRSPVSTWAYLQHLKAIDSQKELLRLSRDLES
SIO_010081: RAPGEF3
subclass of: SO_0000673
so part of: RAPGEF3
location: join(494910..495212,499842..499895,500139..500245,500360..500481,500559..500733,501462..501546,501720..501780,502019..502095,502216..502361,503070..503179,503289..503377,503745..503823,504046..504196,504286..504362,504902..504941,505029..505110,505204..505350,505428..505525,506049..506174,506258..506439,506515..506605,507197..507247,507521..507608,507691..507755,507919..507973,508062..508133,508713..508831)
location: region:494910-508831:1
so has part: feature:494910-495212:1:exon
so has part: feature:499842-499895:1:exon
so has part: feature:500139-500245:1:exon
so has part: feature:500360-500481:1:exon
so has part: feature:500559-500733:1:exon
so has part: feature:501462-501546:1:exon
so has part: feature:501720-501780:1:exon
so has part: feature:502019-502095:1:exon
so has part: feature:502216-502361:1:exon
so has part: feature:503070-503179:1:exon
so has part: feature:503289-503377:1:exon
so has part: feature:503745-503823:1:exon
so has part: feature:504046-504196:1:exon
so has part: feature:504286-504362:1:exon
so has part: feature:504902-504941:1:exon
so has part: feature:505029-505110:1:exon
so has part: feature:505204-505350:1:exon
so has part: feature:505428-505525:1:exon
so has part: feature:506049-506174:1:exon
so has part: feature:506258-506439:1:exon
so has part: feature:506515-506605:1:exon
so has part: feature:507197-507247:1:exon
so has part: feature:507521-507608:1:exon
so has part: feature:507691-507755:1:exon
so has part: feature:507919-507973:1:exon
so has part: feature:508062-508133:1:exon
so has part: feature:508713-508831:1:exon

XP_015742345.1
type: Protein
SIO_000068: ncbiprotein

position:494910:1
position: 494910
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:508831:1
position: 508831
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:494910-495212:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:499842-499895:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:500139-500245:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:500360-500481:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:500559-500733:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:501462-501546:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:501720-501780:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:502019-502095:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:502216-502361:1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:503070-503179:1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:503289-503377:1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:503745-503823:1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:504046-504196:1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:504286-504362:1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:504902-504941:1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:505029-505110:1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:505204-505350:1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:505428-505525:1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:506049-506174:1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:506258-506439:1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:506515-506605:1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:507197-507247:1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:507521-507608:1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:507691-507755:1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:507919-507973:1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:508062-508133:1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:508713-508831:1:exon

ENDOU
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 511230..517960
location: region:511230-517960:1
so has part: feature:511230-517960:1:exon
subclass of: SO_0000010

107325719
type: Gene
SIO_000068: ncbigene

position:511230:1
position: 511230
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517960:1
position: 517960
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511230-517960:1:exon

ENDOU
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: ENDOU
product: endonuclease, poly(U) specific
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886860.2
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(511230..511688,515049..515183,515289..515318,515468..515639,516166..516365,516445..516558,516746..516852,517178..517320,517540..517960)
location: region:511230-517960:1
so has part: feature:511230-511688:1:exon
so has part: feature:515049-515183:1:exon
so has part: feature:515289-515318:1:exon
so has part: feature:515468-515639:1:exon
so has part: feature:516166-516365:1:exon
so has part: feature:516445-516558:1:exon
so has part: feature:516746-516852:1:exon
so has part: feature:517178-517320:1:exon
so has part: feature:517540-517960:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:511230-511688:1:exon

position:511688:1
position: 511688
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:515049-515183:1:exon

position:515049:1
position: 515049
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515183:1
position: 515183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:515289-515318:1:exon

position:515289:1
position: 515289
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515318:1
position: 515318
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:515468-515639:1:exon

position:515468:1
position: 515468
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:515639:1
position: 515639
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:516166-516365:1:exon

position:516166:1
position: 516166
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516365:1
position: 516365
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:516445-516558:1:exon

position:516445:1
position: 516445
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516558:1
position: 516558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:516746-516852:1:exon

position:516746:1
position: 516746
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:516852:1
position: 516852
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:517178-517320:1:exon

position:517178:1
position: 517178
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517320:1
position: 517320
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:517540-517960:1:exon

position:517540:1
position: 517540
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

ENDOU
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: ENDOU
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: poly(U)-specific endoribonuclease
translation: MSSGEVGVQPALRSWVSPGSSLSSRDPHIAGRAQQHPHRCQRAEMLLSTGMMKAFILFLGVGMTLGSLYTDPDSCRGRCDEPYSHEDECHCDADCRSRNSCCRDYPEHCREGEETTHRHTAEHFSHSHDAISDKELLHVSEQLYGADYNKAQPNDININPQHRADPDQTGLQEDLSPEPLYAYVNEKLFSKPTYASFIRLLDNYQRATGHEEEVTAEELQEQNIFLQEVMKTELMKKLYAFLHKKNRYGSEEEFLQDLKEMWFGLYSRGDGEKDSSGFEHVFSGEVKKGKVSGFHNWIRFYLLEKQGLVNYYSHNFDGPWDTYPDVLGLQFSWDGFYKEVGSAFIGCSPEFEFGIYTLCFIARPGRECHLSLGGHGVSIQTYTWTKSTYGHGKKYIATAYIISP
SIO_010081: ENDOU
subclass of: SO_0000673
so part of: ENDOU
location: join(511490..511688,515049..515183,515289..515318,515468..515639,516166..516365,516445..516558,516746..516852,517178..517320,517540..517654)
location: region:511490-517654:1
so has part: feature:511490-511688:1:exon
so has part: feature:515049-515183:1:exon
so has part: feature:515289-515318:1:exon
so has part: feature:515468-515639:1:exon
so has part: feature:516166-516365:1:exon
so has part: feature:516445-516558:1:exon
so has part: feature:516746-516852:1:exon
so has part: feature:517178-517320:1:exon
so has part: feature:517540-517654:1:exon

XP_015742346.1
type: Protein
SIO_000068: ncbiprotein

position:511490:1
position: 511490
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:517654:1
position: 517654
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:511490-511688:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:515049-515183:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:515289-515318:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:515468-515639:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:516166-516365:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:516445-516558:1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:516746-516852:1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:517178-517320:1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:517540-517654:1:exon

NEUROD4
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(527560..530398)
location: region:527560-530398:-1
so has part: feature:527560-530398:-1:exon
subclass of: SO_0000010

107325700
type: Gene
SIO_000068: ncbigene

position:527560:-1
position: 527560
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530398:-1
position: 530398
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:527560-530398:-1:exon

NEUROD4
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NEUROD4
product: neuronal differentiation 4
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 mRNAs, 2 ESTs, 18 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032441110.1
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: complement(527560..530398)
location: region:527560-530398:-1
so has part: feature:527560-530398:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:527560-530398:-1:exon

NEUROD4
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NEUROD4
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: neurogenic differentiation factor 4
translation: MTKTYTKPKEMAELVGTQSWMDEALSSKDELKAENGRQGTFGLVPGLNEEHDSIEEEEEEEDDGEKPKRRGPKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVMPCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPEGKSFVEMLCKGLSQPTSNLVAGCLQLGPQTLFLDKHEEKTPGCESAISSHSFTYQSPGLPSPPYGSMETHLLHLKPPAFKSLVDASFGNPPDCTTPPYEGPLTPPLSISGNFSLKQDGSPDLDKPYAFMAHYPSVSLAGAHGHPTHFQNAVPRYEIPIDMSYESYPHHVAGPQLNAIFNE
SIO_010081: NEUROD4
subclass of: SO_0000673
so part of: NEUROD4
location: complement(529301..530293)
location: region:529301-530293:-1
so has part: feature:529301-530293:-1:exon

XP_032297001.1
type: Protein
SIO_000068: ncbiprotein

position:529301:-1
position: 529301
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:530293:-1
position: 530293
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:529301-530293:-1:exon

LOC107325698
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(548879..550124)
location: region:548879-550124:-1
so has part: feature:548879-550124:-1:exon
subclass of: SO_0000010

107325698
type: Gene
SIO_000068: ncbigene

position:548879:-1
position: 548879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550124:-1
position: 550124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:548879-550124:-1:exon

LOC107325698
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325698
product: protein SUPPRESSOR OF GENE SILENCING 3 homolog
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 57 samples with support for all annotated introns
transcript id: XM_015886810.2
SIO_010081: LOC107325698
subclass of: SO_0000673
so part of: LOC107325698
location: complement(join(548879..549313,549389..549521,549673..550124))
location: region:548879-550124:-1
so has part: feature:549673-550124:-1:exon
so has part: feature:549389-549521:-1:exon
so has part: feature:548879-549313:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:549673-550124:-1:exon

position:549673:-1
position: 549673
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:549389-549521:-1:exon

position:549389:-1
position: 549389
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:549521:-1
position: 549521
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:548879-549313:-1:exon

position:549313:-1
position: 549313
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325698
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325698
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein SUPPRESSOR OF GENE SILENCING 3 homolog
translation: MEKDGGCGQSSTGGGLVWGGGSLCPPGIGWGDTKDGQPWVNPPSTQLGHNGVPQTPPMGMDGGQHPGEPTDPHGALPPPSHCAAGGDQWGEQSRGWHRGGDAEWRPPWKGPFVGSFVSHHPKWAESNEAVDSFEMEEVLSDSDTHKGDDDDDDDDDDDDDGDDDDDDDDEDEASCPMRSRRSLMLYGVGGHSDSSGFMDEPLPEQTT
SIO_010081: LOC107325698
subclass of: SO_0000673
so part of: LOC107325698
location: complement(join(549234..549313,549389..549521,549673..550083))
location: region:549234-550083:-1
so has part: feature:549673-550083:-1:exon
so has part: feature:549389-549521:-1:exon
so has part: feature:549234-549313:-1:exon

XP_015742296.1
type: Protein
SIO_000068: ncbiprotein

position:549234:-1
position: 549234
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550083:-1
position: 550083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:549673-550083:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:549389-549521:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:549234-549313:-1:exon

TESPA1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(550109..561343)
location: region:550109-561343:-1
so has part: feature:550109-561343:-1:exon
subclass of: SO_0000010

107325693
type: Gene
SIO_000068: ncbigene

position:550109:-1
position: 550109
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:561343:-1
position: 561343
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:550109-561343:-1:exon

TESPA1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: TESPA1
product: thymocyte expressed, positive selection associated 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886806.2
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(550109..550126,550186..550478,551406..551614,559659..559739,559879..559915,560074..560127,560530..560579,560868..560910,561045..561343))
location: region:550109-561343:-1
so has part: feature:561045-561343:-1:exon
so has part: feature:560868-560910:-1:exon
so has part: feature:560530-560579:-1:exon
so has part: feature:560074-560127:-1:exon
so has part: feature:559879-559915:-1:exon
so has part: feature:559659-559739:-1:exon
so has part: feature:551406-551614:-1:exon
so has part: feature:550186-550478:-1:exon
so has part: feature:550109-550126:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:561045-561343:-1:exon

position:561045:-1
position: 561045
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:560868-560910:-1:exon

position:560868:-1
position: 560868
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560910:-1
position: 560910
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:560530-560579:-1:exon

position:560530:-1
position: 560530
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560579:-1
position: 560579
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:560074-560127:-1:exon

position:560074:-1
position: 560074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:560127:-1
position: 560127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:559879-559915:-1:exon

position:559879:-1
position: 559879
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559915:-1
position: 559915
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:559659-559739:-1:exon

position:559659:-1
position: 559659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:559739:-1
position: 559739
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:551406-551614:-1:exon

position:551406:-1
position: 551406
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:551614:-1
position: 551614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:550186-550478:-1:exon

position:550186:-1
position: 550186
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:550478:-1
position: 550478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:550109-550126:-1:exon

position:550126:-1
position: 550126
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

TESPA1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: TESPA1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein TESPA1
translation: MLWVCHAQVQTSPILTVSPCARGSPNPPIPTMEGSSVLSPSSWERRRAWARQSRCWRTTVMEEEAAAAMQDIPELQPPHLDDVFMEGSSSSKIETWLQDCGSSSEALQEELSSLGPYGWESSSTSFEDDLTLGAEALLLPGNEKTISRALQGRLSLGHSMASSAPSGLTNRTGSSISEVLDWCQADAEEILYDLGFVQSDPGALTRVPSRFFSSPSQAKGIDFQLFLKSQVQRLEMEDPCLMLASRFHQVQALAATADAFFCLYSYVSKTPLQRISPSPLTWTHPNNPQPHIPPSQPPTLSPAERLRAAVSKMCLYTPPLGRVVREVLERSRGERFRFDPNDRVLMA
SIO_010081: TESPA1
subclass of: SO_0000673
so part of: TESPA1
location: complement(join(550109..550126,550186..550478,551406..551614,559659..559739,559879..559915,560074..560127,560530..560579,560868..560910,561045..561303))
location: region:550109-561303:-1
so has part: feature:561045-561303:-1:exon
so has part: feature:560868-560910:-1:exon
so has part: feature:560530-560579:-1:exon
so has part: feature:560074-560127:-1:exon
so has part: feature:559879-559915:-1:exon
so has part: feature:559659-559739:-1:exon
so has part: feature:551406-551614:-1:exon
so has part: feature:550186-550478:-1:exon
so has part: feature:550109-550126:-1:exon

XP_015742292.1
type: Protein
SIO_000068: ncbiprotein

position:561303:-1
position: 561303
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:561045-561303:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:560868-560910:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:560530-560579:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:560074-560127:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:559879-559915:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:559659-559739:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:551406-551614:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:550186-550478:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:550109-550126:-1:exon

PPP1R1A
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 571236..579751
location: region:571236-579751:1
so has part: feature:571236-579751:1:exon
subclass of: SO_0000010

107325732
type: Gene
SIO_000068: ncbigene

position:571236:1
position: 571236
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579751:1
position: 579751
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571236-579751:1:exon

PPP1R1A
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PPP1R1A
product: protein phosphatase 1 regulatory inhibitor subunit 1A
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 8 Proteins, and 96% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886878.2
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: join(571236..571678,577973..578043,578123..578186,579345..579542,579640..579751)
location: region:571236-579751:1
so has part: feature:571236-571678:1:exon
so has part: feature:577973-578043:1:exon
so has part: feature:578123-578186:1:exon
so has part: feature:579345-579542:1:exon
so has part: feature:579640-579751:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:571236-571678:1:exon

position:571678:1
position: 571678
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:577973-578043:1:exon

position:577973:1
position: 577973
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578043:1
position: 578043
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:578123-578186:1:exon

position:578123:1
position: 578123
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:578186:1
position: 578186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:579345-579542:1:exon

position:579345:1
position: 579345
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579542:1
position: 579542
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:579640-579751:1:exon

position:579640:1
position: 579640
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

PPP1R1A
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PPP1R1A
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein phosphatase 1 regulatory subunit 1A
translation: MEPNGPRKIQFTVPLLEPHLDPEAAEQVGIKAPSPSVPILSPEIDEDRLPNALLKSGLAMSPRQRKKVYCTTPTVKELQMMVEHHLCKQARGEDDDDVPIGAQELSTTCCHHGDPEHNHSPGGSCPLTPAQPTAQGSPEPGDRDERQSAGEEGAHIEPGGKGAAGCV
SIO_010081: PPP1R1A
subclass of: SO_0000673
so part of: PPP1R1A
location: join(571585..571678,577973..578043,578123..578186,579345..579542,579640..579716)
location: region:571585-579716:1
so has part: feature:571585-571678:1:exon
so has part: feature:577973-578043:1:exon
so has part: feature:578123-578186:1:exon
so has part: feature:579345-579542:1:exon
so has part: feature:579640-579716:1:exon

XP_015742364.1
type: Protein
SIO_000068: ncbiprotein

position:571585:1
position: 571585
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:579716:1
position: 579716
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:571585-571678:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:577973-578043:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:578123-578186:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:579345-579542:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:579640-579716:1:exon

PDE1B
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(583631..593875)
location: region:583631-593875:-1
so has part: feature:583631-593875:-1:exon
subclass of: SO_0000010

107325730
type: Gene
SIO_000068: ncbigene

position:583631:-1
position: 583631
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593875:-1
position: 593875
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:583631-593875:-1:exon

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PDE1B
product: phosphodiesterase 1B, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 19 Proteins, and 98% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886875.2
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: complement(join(583631..584012,584113..584221,585381..585517,585716..585842,586450..586531,586628..586748,586835..586936,588339..588464,589501..589601,590418..590558,591253..591369,591679..591745,592419..592637,593766..593875))
location: region:583631-593875:-1
so has part: feature:593766-593875:-1:exon
so has part: feature:592419-592637:-1:exon
so has part: feature:591679-591745:-1:exon
so has part: feature:591253-591369:-1:exon
so has part: feature:590418-590558:-1:exon
so has part: feature:589501-589601:-1:exon
so has part: feature:588339-588464:-1:exon
so has part: feature:586835-586936:-1:exon
so has part: feature:586628-586748:-1:exon
so has part: feature:586450-586531:-1:exon
so has part: feature:585716-585842:-1:exon
so has part: feature:585381-585517:-1:exon
so has part: feature:584113-584221:-1:exon
so has part: feature:583631-584012:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:593766-593875:-1:exon

position:593766:-1
position: 593766
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:592419-592637:-1:exon

position:592419:-1
position: 592419
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:592637:-1
position: 592637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:591679-591745:-1:exon

position:591679:-1
position: 591679
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591745:-1
position: 591745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:591253-591369:-1:exon

position:591253:-1
position: 591253
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:591369:-1
position: 591369
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:590418-590558:-1:exon

position:590418:-1
position: 590418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:590558:-1
position: 590558
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:589501-589601:-1:exon

position:589501:-1
position: 589501
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:589601:-1
position: 589601
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:588339-588464:-1:exon

position:588339:-1
position: 588339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:588464:-1
position: 588464
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:586835-586936:-1:exon

position:586835:-1
position: 586835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586936:-1
position: 586936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:586628-586748:-1:exon

position:586628:-1
position: 586628
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586748:-1
position: 586748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:586450-586531:-1:exon

position:586450:-1
position: 586450
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:586531:-1
position: 586531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:585716-585842:-1:exon

position:585716:-1
position: 585716
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585842:-1
position: 585842
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:585381-585517:-1:exon

position:585381:-1
position: 585381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:585517:-1
position: 585517
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:584113-584221:-1:exon

position:584113:-1
position: 584113
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:584221:-1
position: 584221
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:583631-584012:-1:exon

position:584012:-1
position: 584012
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PDE1B
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PDE1B
product: phosphodiesterase 1B, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 59 samples with support for all annotated introns
transcript id: XM_015886874.2
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: complement(join(583631..584012,584118..584221,585381..585517,585716..585842,586450..586531,586628..586748,586835..586936,588339..588464,589501..589601,590418..590558,591253..591369,591679..591745,592419..592624))
location: region:583631-592624:-1
so has part: feature:592419-592624:-1:exon
so has part: feature:591679-591745:-1:exon
so has part: feature:591253-591369:-1:exon
so has part: feature:590418-590558:-1:exon
so has part: feature:589501-589601:-1:exon
so has part: feature:588339-588464:-1:exon
so has part: feature:586835-586936:-1:exon
so has part: feature:586628-586748:-1:exon
so has part: feature:586450-586531:-1:exon
so has part: feature:585716-585842:-1:exon
so has part: feature:585381-585517:-1:exon
so has part: feature:584118-584221:-1:exon
so has part: feature:583631-584012:-1:exon

position:592624:-1
position: 592624
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592419-592624:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591679-591745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591253-591369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590418-590558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589501-589601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588339-588464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586835-586936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586628-586748:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586450-586531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585716-585842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585381-585517:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:584118-584221:-1:exon

position:584118:-1
position: 584118
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:583631-584012:-1:exon

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B isoform X2
translation: MVKQLETGEVNVEELKRNLEVTSPIITSCPHRQMLDTEDELREMRSDAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPSYSTSVLNCLKNLDLWCFDVFALNRVTEEHSLRTIVYELFTRHNLNSRFKIPAVFLTTLLDALEVGYGKYRNPYHNQAHAADVTQTVHCFLLRTGMLHYLTEIEVLAIIFAAAIHDYEHTGTTNSFHIQTKSDCAILYNDRSVLENHHISAVFRMMQDEEMNIFVNLTKDEFVELRALVIEMVLATDMSCHFQQVKSMKTALQQLERIDKSKVLSLLLHAADISHPTKQWAVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKMVLPQNEDSSKAKGNPTGGQQPSSQWRQTSLDEHLELGDINADLSSFRSTWTKYIQENKQKWKERAASGITNQASIEELSPYEEEPPVPPTQHKHNGEVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: complement(join(584124..584221,585381..585517,585716..585842,586450..586531,586628..586748,586835..586936,588339..588464,589501..589601,590418..590558,591253..591369,591679..591745,592419..592637,593766..593824))
location: region:584124-593824:-1
so has part: feature:593766-593824:-1:exon
so has part: feature:592419-592637:-1:exon
so has part: feature:591679-591745:-1:exon
so has part: feature:591253-591369:-1:exon
so has part: feature:590418-590558:-1:exon
so has part: feature:589501-589601:-1:exon
so has part: feature:588339-588464:-1:exon
so has part: feature:586835-586936:-1:exon
so has part: feature:586628-586748:-1:exon
so has part: feature:586450-586531:-1:exon
so has part: feature:585716-585842:-1:exon
so has part: feature:585381-585517:-1:exon
so has part: feature:584124-584221:-1:exon

XP_015742361.1
type: Protein
SIO_000068: ncbiprotein

position:584124:-1
position: 584124
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:593824:-1
position: 593824
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:593766-593824:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:592419-592637:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591679-591745:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:591253-591369:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:590418-590558:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:589501-589601:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:588339-588464:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586835-586936:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586628-586748:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:586450-586531:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585716-585842:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:585381-585517:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:584124-584221:-1:exon

PDE1B
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PDE1B
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B isoform X1
translation: MLDTEDELREMRSDAVPSEVRDWLAATFTQQARAKGRRAEEKPKFRSIVHAVQAGIFVERMFRRTYTAVGPSYSTSVLNCLKNLDLWCFDVFALNRVTEEHSLRTIVYELFTRHNLNSRFKIPAVFLTTLLDALEVGYGKYRNPYHNQAHAADVTQTVHCFLLRTGMLHYLTEIEVLAIIFAAAIHDYEHTGTTNSFHIQTKSDCAILYNDRSVLENHHISAVFRMMQDEEMNIFVNLTKDEFVELRALVIEMVLATDMSCHFQQVKSMKTALQQLERIDKSKVLSLLLHAADISHPTKQWAVHSRWTKALMEEFFRQGDKEAELGLPFSPLCDRTSTLVAQSQIGFIDFIVEPTFSVLTDVAEKMVLPQNEDSSKAKGNPTGGQQPSSQWRQTSLDEHLELGDINADLSSFRSTWTKYIQENKQKWKERAASGITNQASIEELSPYEEEPPVPPTQHKHNGEVE
SIO_010081: PDE1B
subclass of: SO_0000673
so part of: PDE1B
location: complement(join(584124..584221,585381..585517,585716..585842,586450..586531,586628..586748,586835..586936,588339..588464,589501..589601,590418..590558,591253..591369,591679..591745,592419..592597))
location: region:584124-592597:-1
so has part: feature:592419-592597:-1:exon
so has part: feature:591679-591745:-1:exon
so has part: feature:591253-591369:-1:exon
so has part: feature:590418-590558:-1:exon
so has part: feature:589501-589601:-1:exon
so has part: feature:588339-588464:-1:exon
so has part: feature:586835-586936:-1:exon
so has part: feature:586628-586748:-1:exon
so has part: feature:586450-586531:-1:exon
so has part: feature:585716-585842:-1:exon
so has part: feature:585381-585517:-1:exon
so has part: feature:584124-584221:-1:exon

XP_015742360.1
type: Protein
SIO_000068: ncbiprotein

position:592597:-1
position: 592597
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:592419-592597:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:591679-591745:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:591253-591369:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:590418-590558:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:589501-589601:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:588339-588464:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:586835-586936:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:586628-586748:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:586450-586531:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:585716-585842:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:585381-585517:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:584124-584221:-1:exon

NCKAP1L
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: NCKAP1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(607052..620936)
location: region:607052-620936:-1
so has part: feature:607052-620936:-1:exon
subclass of: SO_0000010

107325731
type: Gene
SIO_000068: ncbigene

position:607052:-1
position: 607052
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620936:-1
position: 620936
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:607052-620936:-1:exon

NCKAP1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: NCKAP1L
product: NCK associated protein 1 like
exception: unclassified transcription discrepancy
note: The sequence of the model RefSeq transcript was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 8 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886876.2
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(607052..607412,607771..607860,608170..608279,608424..608540,608812..608905,609026..609106,609257..609339,609430..609523,610658..610754,610841..610981,611891..612112,613451..613582,613656..613795,614378..614497,614677..614809,615050..615195,615880..615938,616722..616803,616942..617074,617165..617274,617659..617755,618004..618060,618142..618298,618370..618418,618500..618637,618730..618820,618901..619043,619170..619226,619316..619408,619637..619747,620449..620936))
location: region:607052-620936:-1
so has part: feature:620449-620936:-1:exon
so has part: feature:619637-619747:-1:exon
so has part: feature:619316-619408:-1:exon
so has part: feature:619170-619226:-1:exon
so has part: feature:618901-619043:-1:exon
so has part: feature:618730-618820:-1:exon
so has part: feature:618500-618637:-1:exon
so has part: feature:618370-618418:-1:exon
so has part: feature:618142-618298:-1:exon
so has part: feature:618004-618060:-1:exon
so has part: feature:617659-617755:-1:exon
so has part: feature:617165-617274:-1:exon
so has part: feature:616942-617074:-1:exon
so has part: feature:616722-616803:-1:exon
so has part: feature:615880-615938:-1:exon
so has part: feature:615050-615195:-1:exon
so has part: feature:614677-614809:-1:exon
so has part: feature:614378-614497:-1:exon
so has part: feature:613656-613795:-1:exon
so has part: feature:613451-613582:-1:exon
so has part: feature:611891-612112:-1:exon
so has part: feature:610841-610981:-1:exon
so has part: feature:610658-610754:-1:exon
so has part: feature:609430-609523:-1:exon
so has part: feature:609257-609339:-1:exon
so has part: feature:609026-609106:-1:exon
so has part: feature:608812-608905:-1:exon
so has part: feature:608424-608540:-1:exon
so has part: feature:608170-608279:-1:exon
so has part: feature:607771-607860:-1:exon
so has part: feature:607052-607412:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:620449-620936:-1:exon

position:620449:-1
position: 620449
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:619637-619747:-1:exon

position:619637:-1
position: 619637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619747:-1
position: 619747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:619316-619408:-1:exon

position:619316:-1
position: 619316
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619408:-1
position: 619408
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:619170-619226:-1:exon

position:619170:-1
position: 619170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619226:-1
position: 619226
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:618901-619043:-1:exon

position:618901:-1
position: 618901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:619043:-1
position: 619043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:618730-618820:-1:exon

position:618730:-1
position: 618730
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618820:-1
position: 618820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:618500-618637:-1:exon

position:618500:-1
position: 618500
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618637:-1
position: 618637
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:618370-618418:-1:exon

position:618370:-1
position: 618370
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618418:-1
position: 618418
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:618142-618298:-1:exon

position:618142:-1
position: 618142
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618298:-1
position: 618298
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:618004-618060:-1:exon

position:618004:-1
position: 618004
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:618060:-1
position: 618060
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:617659-617755:-1:exon

position:617659:-1
position: 617659
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617755:-1
position: 617755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:617165-617274:-1:exon

position:617165:-1
position: 617165
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617274:-1
position: 617274
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:616942-617074:-1:exon

position:616942:-1
position: 616942
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:617074:-1
position: 617074
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:616722-616803:-1:exon

position:616722:-1
position: 616722
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:616803:-1
position: 616803
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:615880-615938:-1:exon

position:615880:-1
position: 615880
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615938:-1
position: 615938
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:615050-615195:-1:exon

position:615050:-1
position: 615050
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:615195:-1
position: 615195
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:614677-614809:-1:exon

position:614677:-1
position: 614677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614809:-1
position: 614809
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:614378-614497:-1:exon

position:614378:-1
position: 614378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:614497:-1
position: 614497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:613656-613795:-1:exon

position:613656:-1
position: 613656
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613795:-1
position: 613795
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:613451-613582:-1:exon

position:613451:-1
position: 613451
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:613582:-1
position: 613582
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:611891-612112:-1:exon

position:611891:-1
position: 611891
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:612112:-1
position: 612112
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:610841-610981:-1:exon

position:610841:-1
position: 610841
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610981:-1
position: 610981
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:610658-610754:-1:exon

position:610658:-1
position: 610658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:610754:-1
position: 610754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:609430-609523:-1:exon

position:609430:-1
position: 609430
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609523:-1
position: 609523
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:609257-609339:-1:exon

position:609257:-1
position: 609257
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609339:-1
position: 609339
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:609026-609106:-1:exon

position:609026:-1
position: 609026
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:609106:-1
position: 609106
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:608812-608905:-1:exon

position:608812:-1
position: 608812
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608905:-1
position: 608905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:608424-608540:-1:exon

position:608424:-1
position: 608424
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608540:-1
position: 608540
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:608170-608279:-1:exon

position:608170:-1
position: 608170
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:608279:-1
position: 608279
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:607771-607860:-1:exon

position:607771:-1
position: 607771
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:607860:-1
position: 607860
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:607052-607412:-1:exon

position:607412:-1
position: 607412
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

NCKAP1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: NCKAP1L
exception: unclassified translation discrepancy
note: The sequence of the model RefSeq protein was modified relative to this genomic sequence to represent the inferred CDS: deleted 3 bases in 3 codons; Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: LOW QUALITY PROTEIN: nck-associated protein 1-like
translation: MSLPSVYQNKFAEKLSILNERGRGVLVRIYNIKKTCSDPKTRPSFLCDKAMEPSIKFINKKFPNLDVRSSTQHLGPVHKDKGDIIRALGPYYYSFVDVLEFRDHVYELLNTIDANQCFFDININYDFTKSYLDLIVTYVSLVLLLARTEDRRVLIGMYHCAHEMSHGASDSSFARLGQMVLEYDHPLKKLTEEFGPHTKAVTAALLSLHFLFARRNQGSDQWRNDQLLSLLSSAGSMLSPASSDTMACEYLSLEVMERWILIGFLVCPGALGASPQCLELWRLALQGSLYITLLRDEALQIHKVTEELLSSLKGYGKRVADLKECKEHAVAHSGSLHRGRRLYLRGAVRELEALLEDQPGLLGPKALFAFMALSFCRDEVSWLVRHAEHVTKTKTPEDYADSHIAEILFLMEQLRSLVRRQDLVLRRYHVQYLARFDALVLSEIIQNLSVCPEEESIILSSFVSSLSSLSDKGVDEKEQFDFTALRLDWFRLQAYTSVSKAVLPLSTNPDVGRIMNLIVFHTKLLDSLEDLLAETSDLSDLCFFPRPIEKMFVATMEEPSMLRYSIAFPLLCSHFSRCVHPMCPEEYPQLQAAALGMCNKFLEEMARQTCACIMDSCAEQHNLSEQLLPKHCASTVSKARNKKTLKHPSKKGEPEREKPGAESQRKDRTVTTNMDKLHLVLAELSLSLNHVPNISVFEHTVTPAQYLSSHLETRFSKAIVAMACYSQPTQEVARPSEVLVGLGSYITFIQSLTHYVGLDTTRISSATSSLQQTQPRDCQGEQTLTTIYTNWYLEGLMRQASTGAIVPPLPPSSAHSTTVARDGEPSFSAAEFSDCFRMRALAELIGPYGMKFMSDNLMWHVSSQVAELKKLVNENMDTLVQLRSSPCKPEQMAALLPRLSSADNVLKRMTIIGEILSFRAMAQQGLREVFSHHCPFLMGPIGCLTDVVTPDTDIQVTLSIFELASAAGIPCEIDPALVNVLAGSKMDGSSPEEDYKVSCLLLVFVAVSLPLLASDPMSIYNTEMDGYNNNIHCLAKAIIHVSAALFTLHNKNIETHLKEFLLLASMSLLQLGQETDKLRSRNRDAVCLLMQLIVAESSFLTVDMLETCFPYVLLRNAYREVCRESLLNRIPPH
SIO_010081: NCKAP1L
subclass of: SO_0000673
so part of: NCKAP1L
location: complement(join(607287..607412,607771..607860,608170..608279,608424..608540,608812..608905,609026..609106,609257..609339,609430..609523,610658..610754,610841..610981,611891..612112,613451..613582,613656..613795,614378..614497,614677..614809,615050..615195,615880..615938,616722..616803,616942..617074,617165..617274,617659..617755,618004..618060,618142..618298,618370..618418,618500..618637,618730..618820,618901..619043,619170..619226,619316..619408,619637..619747,620449..620550))
location: region:607287-620550:-1
so has part: feature:620449-620550:-1:exon
so has part: feature:619637-619747:-1:exon
so has part: feature:619316-619408:-1:exon
so has part: feature:619170-619226:-1:exon
so has part: feature:618901-619043:-1:exon
so has part: feature:618730-618820:-1:exon
so has part: feature:618500-618637:-1:exon
so has part: feature:618370-618418:-1:exon
so has part: feature:618142-618298:-1:exon
so has part: feature:618004-618060:-1:exon
so has part: feature:617659-617755:-1:exon
so has part: feature:617165-617274:-1:exon
so has part: feature:616942-617074:-1:exon
so has part: feature:616722-616803:-1:exon
so has part: feature:615880-615938:-1:exon
so has part: feature:615050-615195:-1:exon
so has part: feature:614677-614809:-1:exon
so has part: feature:614378-614497:-1:exon
so has part: feature:613656-613795:-1:exon
so has part: feature:613451-613582:-1:exon
so has part: feature:611891-612112:-1:exon
so has part: feature:610841-610981:-1:exon
so has part: feature:610658-610754:-1:exon
so has part: feature:609430-609523:-1:exon
so has part: feature:609257-609339:-1:exon
so has part: feature:609026-609106:-1:exon
so has part: feature:608812-608905:-1:exon
so has part: feature:608424-608540:-1:exon
so has part: feature:608170-608279:-1:exon
so has part: feature:607771-607860:-1:exon
so has part: feature:607287-607412:-1:exon

XP_015742362.1
type: Protein
SIO_000068: ncbiprotein

position:607287:-1
position: 607287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:620550:-1
position: 620550
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:620449-620550:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:619637-619747:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:619316-619408:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:619170-619226:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:618901-619043:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:618730-618820:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:618500-618637:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:618370-618418:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:618142-618298:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:618004-618060:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:617659-617755:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:617165-617274:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:616942-617074:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:616722-616803:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:615880-615938:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:615050-615195:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:614677-614809:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:614378-614497:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:613656-613795:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:613451-613582:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:611891-612112:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:610841-610981:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:610658-610754:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:609430-609523:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:609257-609339:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:609026-609106:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:608812-608905:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:608424-608540:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:608170-608279:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:607771-607860:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:607287-607412:-1:exon

GTSF1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: GTSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 621435..625299
location: region:621435-625299:1
so has part: feature:621435-625299:1:exon
subclass of: SO_0000010

107325729
type: Gene
SIO_000068: ncbigene

position:621435:1
position: 621435
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:625299:1
position: 625299
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621435-625299:1:exon

GTSF1
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: GTSF1
product: gametocyte specific factor 1, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 60 samples with support for all annotated introns
transcript id: XR_004305479.1
SIO_010081: GTSF1
so part of: GTSF1
location: join(621435..622003,623205..623331,623424..623513,623590..623665,623750..623938,624737..624801,625253..625299)
location: region:621435-625299:1
so has part: feature:621435-622003:1:exon
so has part: feature:623205-623331:1:exon
so has part: feature:623424-623513:1:exon
so has part: feature:623590-623665:1:exon
so has part: feature:623750-623938:1:exon
so has part: feature:624737-624801:1:exon
so has part: feature:625253-625299:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:621435-622003:1:exon

position:622003:1
position: 622003
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:623205-623331:1:exon

position:623205:1
position: 623205
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623331:1
position: 623331
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:623424-623513:1:exon

position:623424:1
position: 623424
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623513:1
position: 623513
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:623590-623665:1:exon

position:623590:1
position: 623590
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623665:1
position: 623665
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:623750-623938:1:exon

position:623750:1
position: 623750
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623938:1
position: 623938
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:624737-624801:1:exon

position:624737:1
position: 624737
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:624801:1
position: 624801
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:625253-625299:1:exon

position:625253:1
position: 625253
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

GTSF1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: GTSF1
product: gametocyte specific factor 1, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns
transcript id: XM_032441094.1
SIO_010081: GTSF1
subclass of: SO_0000673
so part of: GTSF1
location: join(621435..622003,623205..623331,623424..623513,623590..623665,623750..623938,625253..625298)
location: region:621435-625298:1
so has part: feature:621435-622003:1:exon
so has part: feature:623205-623331:1:exon
so has part: feature:623424-623513:1:exon
so has part: feature:623590-623665:1:exon
so has part: feature:623750-623938:1:exon
so has part: feature:625253-625298:1:exon

position:625298:1
position: 625298
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621435-622003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623205-623331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623424-623513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623590-623665:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623750-623938:1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:625253-625298:1:exon

GTSF1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: GTSF1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: gametocyte-specific factor 1
translation: MDPEALVQCPYDKAHQIRVSRLPYHLVKCQRNNPQVARTLEVCPFNARHRLPRAELQRHIACCPDQRQLFDCHVLSMCARDPTKQPKVPVAWQAPPCQEDWEAEVDELEEAAPFILNTTAGDLPLQGDSTALTAPPKWSRDVGRAAAITTGYFMEGQDQQEKNRAKKMVAQPRWCPNPL
SIO_010081: GTSF1
subclass of: SO_0000673
so part of: GTSF1
location: join(621911..622003,623205..623331,623424..623513,623590..623665,623750..623903)
location: region:621911-623903:1
so has part: feature:621911-622003:1:exon
so has part: feature:623205-623331:1:exon
so has part: feature:623424-623513:1:exon
so has part: feature:623590-623665:1:exon
so has part: feature:623750-623903:1:exon

XP_032296985.1
type: Protein
SIO_000068: ncbiprotein

position:621911:1
position: 621911
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:623903:1
position: 623903
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:621911-622003:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:623205-623331:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:623424-623513:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:623590-623665:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:623750-623903:1:exon

assembly_gap
type: Assembly Gap
subclass of: SO_0000730
RO_0002162: 93934
estimated length: 100
gap type: between scaffolds
so part of: sequence
location: 640994..641093
location: region:640994-641093:1
so has part: feature:640994-641093:1:region

position:640994:1
position: 640994
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:641093:1
position: 641093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:640994-641093:1:region

LOC107325740
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(<682361..683698)
location: region:682361-683698:-1
so has part: feature:682361-683698:-1:exon
subclass of: SO_0000010

107325740
type: Gene
SIO_000068: ncbigene

position:682361:-1
position: 682361
reference: sequence
type: ReverseStrandPosition
type: FuzzyPosition

position:683698:-1
position: 683698
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:682361-683698:-1:exon

LOC107325740
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325740
product: ADP-ribosylation factor 3
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_015886886.2
SIO_010081: LOC107325740
subclass of: SO_0000673
so part of: LOC107325740
location: complement(join(<682361..682440,683497..683698))
location: region:682361-683698:-1
so has part: feature:683497-683698:-1:exon
so has part: feature:682361-682440:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:683497-683698:-1:exon

position:683497:-1
position: 683497
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:682361-682440:-1:exon

position:682440:-1
position: 682440
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325740
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325740
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: ADP-ribosylation factor 3
translation: MGNIFGNLLKSLIGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRP
SIO_010081: LOC107325740
subclass of: SO_0000673
so part of: LOC107325740
location: complement(join(<682361..682440,683497..683644))
location: region:682361-683644:-1
so has part: feature:683497-683644:-1:exon
so has part: feature:682361-682440:-1:exon

XP_015742372.1
type: Protein
SIO_000068: ncbiprotein

position:683644:-1
position: 683644
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:683497-683644:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:682361-682440:-1:exon

WNT1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: WNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 688036..696008
location: region:688036-696008:1
so has part: feature:688036-696008:1:exon
subclass of: SO_0000010

107325739
type: Gene
SIO_000068: ncbigene

position:688036:1
position: 688036
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:696008:1
position: 696008
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688036-696008:1:exon

WNT1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: WNT1
product: Wnt family member 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 20 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886885.2
SIO_010081: WNT1
subclass of: SO_0000673
so part of: WNT1
location: join(688036..688576,688862..688905,691536..691556,692353..692618,694093..696008)
location: region:688036-696008:1
so has part: feature:688036-688576:1:exon
so has part: feature:688862-688905:1:exon
so has part: feature:691536-691556:1:exon
so has part: feature:692353-692618:1:exon
so has part: feature:694093-696008:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:688036-688576:1:exon

position:688576:1
position: 688576
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:688862-688905:1:exon

position:688862:1
position: 688862
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:688905:1
position: 688905
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:691536-691556:1:exon

position:691536:1
position: 691536
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:691556:1
position: 691556
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:692353-692618:1:exon

position:692353:1
position: 692353
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:692618:1
position: 692618
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:694093-696008:1:exon

position:694093:1
position: 694093
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

WNT1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: WNT1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: proto-oncogene Wnt-1
translation: MRGPAVIVVALRALCALTTLRGTARAVNNSGRWWAWGYGVWDMVYGISGMRVVNRGCRETAFIFAITSAGVTHSVARSCSEGSIESCTCDYRRRGPGGPDWHWGGCSDNIDFGRLFGREFVDSSEKGRDLRFLMNLHNNEAGRMTVFSEMRQECKCHGMSGSCTVRTCWMRLPTFRAVGDVLKDRFDGASRVIYGNKGSNRASRVELHHLEPENPAHKPPSPHDLVYFEKSPNFCSYSGKMGTAGTAGRACNSSSPGLDGCELLCCGRGFRTRTQRVTERCNCTFHWCCHVSCLNCTNTQVLHECL
SIO_010081: WNT1
subclass of: SO_0000673
so part of: WNT1
location: join(688476..688576,688862..688905,691536..691556,692353..692618,694093..694581)
location: region:688476-694581:1
so has part: feature:688476-688576:1:exon
so has part: feature:688862-688905:1:exon
so has part: feature:691536-691556:1:exon
so has part: feature:692353-692618:1:exon
so has part: feature:694093-694581:1:exon

XP_015742371.1
type: Protein
SIO_000068: ncbiprotein

position:688476:1
position: 688476
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:694581:1
position: 694581
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:688476-688576:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:688862-688905:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:691536-691556:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:692353-692618:1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:694093-694581:1:exon

PRKAG1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PRKAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(707820..714309)
location: region:707820-714309:-1
so has part: feature:707820-714309:-1:exon
subclass of: SO_0000010

107325757
type: Gene
SIO_000068: ncbigene

position:707820:-1
position: 707820
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714309:-1
position: 714309
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:707820-714309:-1:exon

PRKAG1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PRKAG1
product: protein kinase AMP-activated non-catalytic subunit gamma 1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 33 Proteins, and 95% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_015886910.2
SIO_010081: PRKAG1
subclass of: SO_0000673
so part of: PRKAG1
location: complement(join(707820..708306,708382..708528,709137..709174,709297..709462,709764..709890,710024..710078,710155..710200,710899..710957,711040..711121,711211..711314,714020..714092,714220..714309))
location: region:707820-714309:-1
so has part: feature:714220-714309:-1:exon
so has part: feature:714020-714092:-1:exon
so has part: feature:711211-711314:-1:exon
so has part: feature:711040-711121:-1:exon
so has part: feature:710899-710957:-1:exon
so has part: feature:710155-710200:-1:exon
so has part: feature:710024-710078:-1:exon
so has part: feature:709764-709890:-1:exon
so has part: feature:709297-709462:-1:exon
so has part: feature:709137-709174:-1:exon
so has part: feature:708382-708528:-1:exon
so has part: feature:707820-708306:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:714220-714309:-1:exon

position:714220:-1
position: 714220
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:714020-714092:-1:exon

position:714020:-1
position: 714020
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714092:-1
position: 714092
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:711211-711314:-1:exon

position:711211:-1
position: 711211
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711314:-1
position: 711314
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:711040-711121:-1:exon

position:711040:-1
position: 711040
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:711121:-1
position: 711121
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:710899-710957:-1:exon

position:710899:-1
position: 710899
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710957:-1
position: 710957
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:710155-710200:-1:exon

position:710155:-1
position: 710155
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710200:-1
position: 710200
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:710024-710078:-1:exon

position:710024:-1
position: 710024
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:710078:-1
position: 710078
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:709764-709890:-1:exon

position:709764:-1
position: 709764
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709890:-1
position: 709890
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:709297-709462:-1:exon

position:709297:-1
position: 709297
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709462:-1
position: 709462
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:709137-709174:-1:exon

position:709137:-1
position: 709137
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:709174:-1
position: 709174
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:708382-708528:-1:exon

position:708382:-1
position: 708382
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:708528:-1
position: 708528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:707820-708306:-1:exon

position:708306:-1
position: 708306
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PRKAG1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PRKAG1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: 5'-AMP-activated protein kinase subunit gamma-1
translation: MEEPGPGSAAESPVERGETGTGTGTGGDPLRGAYTSFMKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFINILHRYYRSPLVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPDSGNTLYILTHKRILKFLKLFIAEVPKPEFMGRTLEELRIGTYSNIAVVNTSTPIYVALGIFVQHRVSALPVVDDSGRVVDIYSKFDVINLAAEKTYNNLDVTVTRALQHRSHYFEGVLKCYKHETLEAIINRLVEAEVHRLVVVDESDVVKGIVSLSDILQALVLPEGSEP
SIO_010081: PRKAG1
subclass of: SO_0000673
so part of: PRKAG1
location: complement(join(708202..708306,708382..708528,709137..709174,709297..709462,709764..709890,710024..710078,710155..710200,710899..710957,711040..711121,711211..711314,714020..714092,714220..714225))
location: region:708202-714225:-1
so has part: feature:714220-714225:-1:exon
so has part: feature:714020-714092:-1:exon
so has part: feature:711211-711314:-1:exon
so has part: feature:711040-711121:-1:exon
so has part: feature:710899-710957:-1:exon
so has part: feature:710155-710200:-1:exon
so has part: feature:710024-710078:-1:exon
so has part: feature:709764-709890:-1:exon
so has part: feature:709297-709462:-1:exon
so has part: feature:709137-709174:-1:exon
so has part: feature:708382-708528:-1:exon
so has part: feature:708202-708306:-1:exon

XP_015742396.1
type: Protein
SIO_000068: ncbiprotein

position:708202:-1
position: 708202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:714225:-1
position: 714225
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:714220-714225:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:714020-714092:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:711211-711314:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:711040-711121:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:710899-710957:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:710155-710200:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:710024-710078:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:709764-709890:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:709297-709462:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:709137-709174:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:708382-708528:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:708202-708306:-1:exon

KMT2D
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: KMT2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(718999..749244)
location: region:718999-749244:-1
so has part: feature:718999-749244:-1:exon
subclass of: SO_0000010

107325738
type: Gene
SIO_000068: ncbigene

position:718999:-1
position: 718999
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:749244:-1
position: 749244
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:718999-749244:-1:exon

KMT2D
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: KMT2D
product: lysine methyltransferase 2D
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins, and 99% coverage of the annotated genomic feature by RNAseq alignments
transcript id: XM_032441061.1
SIO_010081: KMT2D
subclass of: SO_0000673
so part of: KMT2D
location: complement(join(718999..719329,720376..720506,720618..720754,721551..722721,723090..723237,725057..725260,725777..725858,726381..726531,726629..726793,726881..727021,727134..730088,730167..730399,730512..730578,730748..730835,730939..731062,731189..733197,733526..733677,733755..733928,734151..735845,735992..736042,736134..736207,736745..736989,737087..737171,737471..737641,737797..737901,738144..738218,738399..738588,738728..738852,739417..739533,739614..739757,739835..740053,740153..740197,740286..740395,740652..740816,740902..741083,741207..741311,741397..741507,741832..741945,742056..742906,742998..743132,743323..744188,744337..744503,744587..744701,744787..744952,745068..745230,745351..745457,746299..746528,746611..746737,746857..746939,748895..749244))
location: region:718999-749244:-1
so has part: feature:748895-749244:-1:exon
so has part: feature:746857-746939:-1:exon
so has part: feature:746611-746737:-1:exon
so has part: feature:746299-746528:-1:exon
so has part: feature:745351-745457:-1:exon
so has part: feature:745068-745230:-1:exon
so has part: feature:744787-744952:-1:exon
so has part: feature:744587-744701:-1:exon
so has part: feature:744337-744503:-1:exon
so has part: feature:743323-744188:-1:exon
so has part: feature:742998-743132:-1:exon
so has part: feature:742056-742906:-1:exon
so has part: feature:741832-741945:-1:exon
so has part: feature:741397-741507:-1:exon
so has part: feature:741207-741311:-1:exon
so has part: feature:740902-741083:-1:exon
so has part: feature:740652-740816:-1:exon
so has part: feature:740286-740395:-1:exon
so has part: feature:740153-740197:-1:exon
so has part: feature:739835-740053:-1:exon
so has part: feature:739614-739757:-1:exon
so has part: feature:739417-739533:-1:exon
so has part: feature:738728-738852:-1:exon
so has part: feature:738399-738588:-1:exon
so has part: feature:738144-738218:-1:exon
so has part: feature:737797-737901:-1:exon
so has part: feature:737471-737641:-1:exon
so has part: feature:737087-737171:-1:exon
so has part: feature:736745-736989:-1:exon
so has part: feature:736134-736207:-1:exon
so has part: feature:735992-736042:-1:exon
so has part: feature:734151-735845:-1:exon
so has part: feature:733755-733928:-1:exon
so has part: feature:733526-733677:-1:exon
so has part: feature:731189-733197:-1:exon
so has part: feature:730939-731062:-1:exon
so has part: feature:730748-730835:-1:exon
so has part: feature:730512-730578:-1:exon
so has part: feature:730167-730399:-1:exon
so has part: feature:727134-730088:-1:exon
so has part: feature:726881-727021:-1:exon
so has part: feature:726629-726793:-1:exon
so has part: feature:726381-726531:-1:exon
so has part: feature:725777-725858:-1:exon
so has part: feature:725057-725260:-1:exon
so has part: feature:723090-723237:-1:exon
so has part: feature:721551-722721:-1:exon
so has part: feature:720618-720754:-1:exon
so has part: feature:720376-720506:-1:exon
so has part: feature:718999-719329:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:748895-749244:-1:exon

position:748895:-1
position: 748895
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:746857-746939:-1:exon

position:746857:-1
position: 746857
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746939:-1
position: 746939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:746611-746737:-1:exon

position:746611:-1
position: 746611
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746737:-1
position: 746737
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:746299-746528:-1:exon

position:746299:-1
position: 746299
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:746528:-1
position: 746528
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:745351-745457:-1:exon

position:745351:-1
position: 745351
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745457:-1
position: 745457
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:745068-745230:-1:exon

position:745068:-1
position: 745068
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:745230:-1
position: 745230
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:744787-744952:-1:exon

position:744787:-1
position: 744787
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744952:-1
position: 744952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:744587-744701:-1:exon

position:744587:-1
position: 744587
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744701:-1
position: 744701
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:744337-744503:-1:exon

position:744337:-1
position: 744337
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744503:-1
position: 744503
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:743323-744188:-1:exon

position:743323:-1
position: 743323
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:744188:-1
position: 744188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:742998-743132:-1:exon

position:742998:-1
position: 742998
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:743132:-1
position: 743132
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:742056-742906:-1:exon

position:742056:-1
position: 742056
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:742906:-1
position: 742906
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:741832-741945:-1:exon

position:741832:-1
position: 741832
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741945:-1
position: 741945
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:741397-741507:-1:exon

position:741397:-1
position: 741397
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741507:-1
position: 741507
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:741207-741311:-1:exon

position:741207:-1
position: 741207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741311:-1
position: 741311
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:740902-741083:-1:exon

position:740902:-1
position: 740902
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:741083:-1
position: 741083
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:740652-740816:-1:exon

position:740652:-1
position: 740652
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740816:-1
position: 740816
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:740286-740395:-1:exon

position:740286:-1
position: 740286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740395:-1
position: 740395
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:740153-740197:-1:exon

position:740153:-1
position: 740153
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740197:-1
position: 740197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:739835-740053:-1:exon

position:739835:-1
position: 739835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:740053:-1
position: 740053
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:739614-739757:-1:exon

position:739614:-1
position: 739614
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739757:-1
position: 739757
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:739417-739533:-1:exon

position:739417:-1
position: 739417
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:739533:-1
position: 739533
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 23
SIO_000628: feature:738728-738852:-1:exon

position:738728:-1
position: 738728
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738852:-1
position: 738852
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 24
SIO_000628: feature:738399-738588:-1:exon

position:738399:-1
position: 738399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738588:-1
position: 738588
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 25
SIO_000628: feature:738144-738218:-1:exon

position:738144:-1
position: 738144
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:738218:-1
position: 738218
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 26
SIO_000628: feature:737797-737901:-1:exon

position:737797:-1
position: 737797
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737901:-1
position: 737901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 27
SIO_000628: feature:737471-737641:-1:exon

position:737471:-1
position: 737471
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737641:-1
position: 737641
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 28
SIO_000628: feature:737087-737171:-1:exon

position:737087:-1
position: 737087
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:737171:-1
position: 737171
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 29
SIO_000628: feature:736745-736989:-1:exon

position:736745:-1
position: 736745
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736989:-1
position: 736989
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 30
SIO_000628: feature:736134-736207:-1:exon

position:736134:-1
position: 736134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736207:-1
position: 736207
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 31
SIO_000628: feature:735992-736042:-1:exon

position:735992:-1
position: 735992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:736042:-1
position: 736042
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 32
SIO_000628: feature:734151-735845:-1:exon

position:734151:-1
position: 734151
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:735845:-1
position: 735845
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 33
SIO_000628: feature:733755-733928:-1:exon

position:733755:-1
position: 733755
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733928:-1
position: 733928
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 34
SIO_000628: feature:733526-733677:-1:exon

position:733526:-1
position: 733526
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733677:-1
position: 733677
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 35
SIO_000628: feature:731189-733197:-1:exon

position:731189:-1
position: 731189
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:733197:-1
position: 733197
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 36
SIO_000628: feature:730939-731062:-1:exon

position:730939:-1
position: 730939
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:731062:-1
position: 731062
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 37
SIO_000628: feature:730748-730835:-1:exon

position:730748:-1
position: 730748
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730835:-1
position: 730835
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 38
SIO_000628: feature:730512-730578:-1:exon

position:730512:-1
position: 730512
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730578:-1
position: 730578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 39
SIO_000628: feature:730167-730399:-1:exon

position:730167:-1
position: 730167
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730399:-1
position: 730399
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 40
SIO_000628: feature:727134-730088:-1:exon

position:727134:-1
position: 727134
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:730088:-1
position: 730088
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 41
SIO_000628: feature:726881-727021:-1:exon

position:726881:-1
position: 726881
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:727021:-1
position: 727021
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 42
SIO_000628: feature:726629-726793:-1:exon

position:726629:-1
position: 726629
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726793:-1
position: 726793
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 43
SIO_000628: feature:726381-726531:-1:exon

position:726381:-1
position: 726381
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:726531:-1
position: 726531
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 44
SIO_000628: feature:725777-725858:-1:exon

position:725777:-1
position: 725777
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725858:-1
position: 725858
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 45
SIO_000628: feature:725057-725260:-1:exon

position:725057:-1
position: 725057
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:725260:-1
position: 725260
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 46
SIO_000628: feature:723090-723237:-1:exon

position:723090:-1
position: 723090
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:723237:-1
position: 723237
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 47
SIO_000628: feature:721551-722721:-1:exon

position:721551:-1
position: 721551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:722721:-1
position: 722721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 48
SIO_000628: feature:720618-720754:-1:exon

position:720618:-1
position: 720618
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720754:-1
position: 720754
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 49
SIO_000628: feature:720376-720506:-1:exon

position:720376:-1
position: 720376
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:720506:-1
position: 720506
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 50
SIO_000628: feature:718999-719329:-1:exon

position:719329:-1
position: 719329
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

KMT2D
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: KMT2D
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: histone-lysine N-methyltransferase 2D
translation: MDEQNPPSEDKDADAPAGAAASSEEMGSAEGDPLKPPEGATAGPELESTDTKGPDGASSTPARRCALCNCGDWSPHGQRELQRFEPAPDLLEGLKGQQTPEGLGEAPPELGPVGDELAQVGFSEGVAAVQLFEPTGHCWVHRCCAAWSAGVEQDAAGLSGVGRAVFSGISQKCEHCQRLGATIPCRAAACSHFYHFPCAAASGSFQSMKTLRLLCPEHVDQAVQMEDARCVVCDGPGDLQDLLFCTSCGQHYHGTCLDITLTPRKRSGWQCPECKVCQTCRQHGEDSMMLVCEACDKGYHTFCMEPAIEGVPADSWKCKNCRVCSDCGRRPSELDPGCQWHQSFSVCEGCQQQRAAKEAEGVQERAPQLEPPAQALTSPERSEPAEIPALEPEPAGCNEELQHEGDPKETPQGHEESAPSQASPEEPPLEKLLPNELPTNTQPPDEPPPHSDPPPDELLLESAPLDELPPNETAPSETPLDGPSLDELPPDEAPLIKSPPSEVPLEKSPPDELPLEKPPPIKPPISEITLDELPLDERPPDEPRVDEMPPEKPPLDEQPPEKPPLDEQPPIELPSDKELLDEQPPEELPPEKPLLDELPLVEQPPDEPAPSEQHLDELPANEAPPDELLPKELPVNELPAPEELHPEELLPCELPAEEDPKPPGLLPEVAVAEEAPELAPEVPPEEEMELEPEPLLPPEMALPPPAPPDLCAVSPARPPDPLPHITEDDVSEPPTPALPEPPRSPSTAMDTEPPGSPPPPLGSPACTPAPAEPPEDDEMETGGGEGDSSRSPPGDGPRASPPPELGPFQGLPEEEEEEEEEAPRLEREGTSGSSPPLSEEDGLEEGRAGGNPESKGSPLLLEPEELGLETPMEVCTAGEKLLERGDEGGPEPPTLRPRPDILNEISNLSQGDTSSSFPGSEPLLGSPDPEGGGSLSLDLGPASGDASLQKEDAGSLPMGAETDDSLLFEPAAKGDADKGRRRSSPGRSRVKQGRSSSFPGRRRPRGGSHGTRGRGRARLKSTTSSVDTLALADVESSPSKEEDEDDDDTMQNTVVLFSNTDKFVLMQDMCVVCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKGWRCVECIVCEVCGKASDPSRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVCCVQCGAASPGFHCEWQNNYTHCAPCASLVVCPFCREKYVEDDLLIQCRHCDRWLHAACDSLFTEEEVEQAADEGFDCSACQPYVIKPAAPAPAPDMLAKAKEPEPQYFRFEGVWLTETGMAVLRNLTMSPLHKRRQRKAPRLGALNGDGGLEGGDPLGPDDKKDGDLDADELLKAEVSVEHMECEIKLEAPASPDRDVGVDVDSGKGLEDPDECKKRKRKPYRPGIGGFMVRQRKSHTRLKKVPAVLAEVGREGLSSEGHPEDGAPGDLPAEGGLDPSSAEGDEKKKRRARKKSKLEDMFPPYLQEAFFGKALMDLSRKALLAAGGVGDGAARPSLAQGAPRHKGDPNVAGALQGTPPERRETPVHPRGDDSTDGSATALDDDGKDDTKGEDLGTDDPKDSPNRGDAEKPATPGEGALSSDLDKIPTEELPKMESKDVQQLFKDVLGSAERGEQPLNCVEGSGAGQDPGRAQRPFLQGELQLPGQGSVSLGSLSGSVSLDSYPGVCQSPFLDNRERSGFFSPDHCEPESPWASSSAATTPSTPTTPTTEGEGDGLSYNQRSLQRWEKDEELGELSTISPVLYANMNFPNLKQDYPDWSSRCKQIMKLWRKVPAADKAPYLQKAKDNRAAHRINKVQKQAESQINKQTKGEGLRKPERPSLHLRIPVPPGTQPVYISSPPAAGEGFLKPGAGGGGPESPSELFLKLPPQSPAQVPSHDPYGAAPSYTLEPRFSSPLGQSPTSGAAFQPFPSQPLAGPRSIPGSQSSDFHPTPPGTPRHQPGTPDPFLKPRCPSLDNLSVPGSPGARPSEALLSPLPFGEQKKGLEVKKEEGGSLG…
SIO_010081: KMT2D
subclass of: SO_0000673
so part of: KMT2D
location: complement(join(718999..719329,720376..720506,720618..720754,721551..722721,723090..723237,725057..725260,725777..725858,726381..726531,726629..726793,726881..727021,727134..730088,730167..730399,730512..730578,730748..730835,730939..731062,731189..733197,733526..733677,733755..733928,734151..735845,735992..736042,736134..736207,736745..736989,737087..737171,737471..737641,737797..737901,738144..738218,738399..738588,738728..738852,739417..739533,739614..739757,739835..740053,740153..740197,740286..740395,740652..740816,740902..741083,741207..741311,741397..741507,741832..741945,742056..742906,742998..743132,743323..744188,744337..744503,744587..744701,744787..744952,745068..745230,745351..745457,746299..746528,746611..746737,746857..746905))
location: region:718999-746905:-1
so has part: feature:746857-746905:-1:exon
so has part: feature:746611-746737:-1:exon
so has part: feature:746299-746528:-1:exon
so has part: feature:745351-745457:-1:exon
so has part: feature:745068-745230:-1:exon
so has part: feature:744787-744952:-1:exon
so has part: feature:744587-744701:-1:exon
so has part: feature:744337-744503:-1:exon
so has part: feature:743323-744188:-1:exon
so has part: feature:742998-743132:-1:exon
so has part: feature:742056-742906:-1:exon
so has part: feature:741832-741945:-1:exon
so has part: feature:741397-741507:-1:exon
so has part: feature:741207-741311:-1:exon
so has part: feature:740902-741083:-1:exon
so has part: feature:740652-740816:-1:exon
so has part: feature:740286-740395:-1:exon
so has part: feature:740153-740197:-1:exon
so has part: feature:739835-740053:-1:exon
so has part: feature:739614-739757:-1:exon
so has part: feature:739417-739533:-1:exon
so has part: feature:738728-738852:-1:exon
so has part: feature:738399-738588:-1:exon
so has part: feature:738144-738218:-1:exon
so has part: feature:737797-737901:-1:exon
so has part: feature:737471-737641:-1:exon
so has part: feature:737087-737171:-1:exon
so has part: feature:736745-736989:-1:exon
so has part: feature:736134-736207:-1:exon
so has part: feature:735992-736042:-1:exon
so has part: feature:734151-735845:-1:exon
so has part: feature:733755-733928:-1:exon
so has part: feature:733526-733677:-1:exon
so has part: feature:731189-733197:-1:exon
so has part: feature:730939-731062:-1:exon
so has part: feature:730748-730835:-1:exon
so has part: feature:730512-730578:-1:exon
so has part: feature:730167-730399:-1:exon
so has part: feature:727134-730088:-1:exon
so has part: feature:726881-727021:-1:exon
so has part: feature:726629-726793:-1:exon
so has part: feature:726381-726531:-1:exon
so has part: feature:725777-725858:-1:exon
so has part: feature:725057-725260:-1:exon
so has part: feature:723090-723237:-1:exon
so has part: feature:721551-722721:-1:exon
so has part: feature:720618-720754:-1:exon
so has part: feature:720376-720506:-1:exon
so has part: feature:718999-719329:-1:exon

XP_032296952.1
type: Protein
SIO_000068: ncbiprotein

position:746905:-1
position: 746905
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:746857-746905:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:746611-746737:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:746299-746528:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:745351-745457:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:745068-745230:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:744787-744952:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:744587-744701:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:744337-744503:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:743323-744188:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:742998-743132:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:742056-742906:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:741832-741945:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:741397-741507:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:741207-741311:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:740902-741083:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:740652-740816:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:740286-740395:-1:exon

urn:…
SIO_000300: 18
SIO_000628: feature:740153-740197:-1:exon

urn:…
SIO_000300: 19
SIO_000628: feature:739835-740053:-1:exon

urn:…
SIO_000300: 20
SIO_000628: feature:739614-739757:-1:exon

urn:…
SIO_000300: 21
SIO_000628: feature:739417-739533:-1:exon

urn:…
SIO_000300: 22
SIO_000628: feature:738728-738852:-1:exon

urn:…
SIO_000300: 23
SIO_000628: feature:738399-738588:-1:exon

urn:…
SIO_000300: 24
SIO_000628: feature:738144-738218:-1:exon

urn:…
SIO_000300: 25
SIO_000628: feature:737797-737901:-1:exon

urn:…
SIO_000300: 26
SIO_000628: feature:737471-737641:-1:exon

urn:…
SIO_000300: 27
SIO_000628: feature:737087-737171:-1:exon

urn:…
SIO_000300: 28
SIO_000628: feature:736745-736989:-1:exon

urn:…
SIO_000300: 29
SIO_000628: feature:736134-736207:-1:exon

urn:…
SIO_000300: 30
SIO_000628: feature:735992-736042:-1:exon

urn:…
SIO_000300: 31
SIO_000628: feature:734151-735845:-1:exon

urn:…
SIO_000300: 32
SIO_000628: feature:733755-733928:-1:exon

urn:…
SIO_000300: 33
SIO_000628: feature:733526-733677:-1:exon

urn:…
SIO_000300: 34
SIO_000628: feature:731189-733197:-1:exon

urn:…
SIO_000300: 35
SIO_000628: feature:730939-731062:-1:exon

urn:…
SIO_000300: 36
SIO_000628: feature:730748-730835:-1:exon

urn:…
SIO_000300: 37
SIO_000628: feature:730512-730578:-1:exon

urn:…
SIO_000300: 38
SIO_000628: feature:730167-730399:-1:exon

urn:…
SIO_000300: 39
SIO_000628: feature:727134-730088:-1:exon

urn:…
SIO_000300: 40
SIO_000628: feature:726881-727021:-1:exon

urn:…
SIO_000300: 41
SIO_000628: feature:726629-726793:-1:exon

urn:…
SIO_000300: 42
SIO_000628: feature:726381-726531:-1:exon

urn:…
SIO_000300: 43
SIO_000628: feature:725777-725858:-1:exon

urn:…
SIO_000300: 44
SIO_000628: feature:725057-725260:-1:exon

urn:…
SIO_000300: 45
SIO_000628: feature:723090-723237:-1:exon

urn:…
SIO_000300: 46
SIO_000628: feature:721551-722721:-1:exon

urn:…
SIO_000300: 47
SIO_000628: feature:720618-720754:-1:exon

urn:…
SIO_000300: 48
SIO_000628: feature:720376-720506:-1:exon

urn:…
SIO_000300: 49
SIO_000628: feature:718999-719329:-1:exon

DHH
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(751774..756404)
location: region:751774-756404:-1
so has part: feature:751774-756404:-1:exon
subclass of: SO_0000010

107325761
type: Gene
SIO_000068: ncbigene

position:751774:-1
position: 751774
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:756404:-1
position: 756404
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:751774-756404:-1:exon

DHH
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DHH
product: desert hedgehog signaling molecule
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 17 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 48 samples with support for all annotated introns
transcript id: XM_015886916.2
SIO_010081: DHH
subclass of: SO_0000673
so part of: DHH
location: complement(join(751774..752465,752990..753251,755327..756404))
location: region:751774-756404:-1
so has part: feature:755327-756404:-1:exon
so has part: feature:752990-753251:-1:exon
so has part: feature:751774-752465:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:755327-756404:-1:exon

position:755327:-1
position: 755327
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:752990-753251:-1:exon

position:752990:-1
position: 752990
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:753251:-1
position: 753251
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:751774-752465:-1:exon

position:752465:-1
position: 752465
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

DHH
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: DHH
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: desert hedgehog protein
translation: MSRCAPLALLAVLLAAPVLCCGPGRGPVGRRRFGRRQLSPLLYKQFVPNVPEQTLGASGRAEGKVLRGSERFRELVPNYNPDIIFKDEENTGADRLMTERCKERVNSLAIAVMNMWPGVRLRVTEGWDEDGHHLPDSLHYEGRALDITTSDRDRHKYGMLARLAVEAGFDWVYYESKAHIHVSVRADNSLAIRTGGCFPGHATVTLRSGESRGLAELRRGDWVLGAEPGGRLVPTQVLLFLHRDLGQRASFVAIETVSPSQRLLLTPSHLVFASRGLTNGSTKFLPVFARRLRPGDSVLAHGDKGLRPAKVLRVSREEGVGVFAPLTSHGTLLVNGVLASCYAVLESHRWAHRAFAPLRLFHGLLSLLPARPEPGNGTVTEMGVHWYSRLLYRLARGVLGREGAGG
SIO_010081: DHH
subclass of: SO_0000673
so part of: DHH
location: complement(join(751804..752465,752990..753251,755327..755623))
location: region:751804-755623:-1
so has part: feature:755327-755623:-1:exon
so has part: feature:752990-753251:-1:exon
so has part: feature:751804-752465:-1:exon

XP_015742402.1
type: Protein
SIO_000068: ncbiprotein

position:751804:-1
position: 751804
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:755623:-1
position: 755623
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:755327-755623:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:752990-753251:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:751804-752465:-1:exon

LMBR1L
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LMBR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(757266..762453)
location: region:757266-762453:-1
so has part: feature:757266-762453:-1:exon
subclass of: SO_0000010

107325760
type: Gene
SIO_000068: ncbigene

position:757266:-1
position: 757266
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762453:-1
position: 762453
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:757266-762453:-1:exon

LMBR1L
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LMBR1L
product: limb development membrane protein 1 like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 24 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 83 samples with support for all annotated introns
transcript id: XM_015886915.2
SIO_010081: LMBR1L
subclass of: SO_0000673
so part of: LMBR1L
location: complement(join(757266..757791,757878..758039,758143..758209,758288..758378,758478..758551,758665..758742,758813..758889,758965..759048,759127..759202,759320..759384,759480..759548,759642..759768,759849..759952,760043..760182,760296..760332,760578..760662,762216..762453))
location: region:757266-762453:-1
so has part: feature:762216-762453:-1:exon
so has part: feature:760578-760662:-1:exon
so has part: feature:760296-760332:-1:exon
so has part: feature:760043-760182:-1:exon
so has part: feature:759849-759952:-1:exon
so has part: feature:759642-759768:-1:exon
so has part: feature:759480-759548:-1:exon
so has part: feature:759320-759384:-1:exon
so has part: feature:759127-759202:-1:exon
so has part: feature:758965-759048:-1:exon
so has part: feature:758813-758889:-1:exon
so has part: feature:758665-758742:-1:exon
so has part: feature:758478-758551:-1:exon
so has part: feature:758288-758378:-1:exon
so has part: feature:758143-758209:-1:exon
so has part: feature:757878-758039:-1:exon
so has part: feature:757266-757791:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:762216-762453:-1:exon

position:762216:-1
position: 762216
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:760578-760662:-1:exon

position:760578:-1
position: 760578
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760662:-1
position: 760662
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:760296-760332:-1:exon

position:760296:-1
position: 760296
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760332:-1
position: 760332
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:760043-760182:-1:exon

position:760043:-1
position: 760043
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:760182:-1
position: 760182
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:759849-759952:-1:exon

position:759849:-1
position: 759849
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759952:-1
position: 759952
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:759642-759768:-1:exon

position:759642:-1
position: 759642
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759768:-1
position: 759768
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:759480-759548:-1:exon

position:759480:-1
position: 759480
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759548:-1
position: 759548
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:759320-759384:-1:exon

position:759320:-1
position: 759320
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759384:-1
position: 759384
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:759127-759202:-1:exon

position:759127:-1
position: 759127
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759202:-1
position: 759202
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:758965-759048:-1:exon

position:758965:-1
position: 758965
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:759048:-1
position: 759048
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:758813-758889:-1:exon

position:758813:-1
position: 758813
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758889:-1
position: 758889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:758665-758742:-1:exon

position:758665:-1
position: 758665
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758742:-1
position: 758742
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:758478-758551:-1:exon

position:758478:-1
position: 758478
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758551:-1
position: 758551
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:758288-758378:-1:exon

position:758288:-1
position: 758288
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758378:-1
position: 758378
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:758143-758209:-1:exon

position:758143:-1
position: 758143
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758209:-1
position: 758209
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:757878-758039:-1:exon

position:757878:-1
position: 757878
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:758039:-1
position: 758039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:757266-757791:-1:exon

position:757791:-1
position: 757791
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LMBR1L
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LMBR1L
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: protein LMBR1L
translation: MAPVELDALAVREQLFHQRVRECLICALLFASLYILCHFVIRHFKKQTDFAAVHDDEDAAVDRIALGLCTFTLAVALGAVLLLPFSIISNEVLLSFPHNYYIQWLNGSLIHGLWNLVFLFSNLSLVFLMPFAYFFTESEGFAGSKKGIMARVYETSVVLLLLTLLVLGMVWVASAIAGNDAVSRQSLYDLWECYLPYLYSCISLFGVLLLLLCTPFGLSTMFTVTGKLLVKPRLLEDLDEQLNCTRFEEAAVSHRITSGKASCWLNLNMAMLREQLLSIQSKRKKLELRHRASPWQRNVGYPLAMLGLVALTGISVLIVCFHVLELLLDDAAMPRGMQDTALGQVSFSILGSFGAALQVVLIFYLMLSSVVGFYSSPLFTQLLPERQDTPLTKIIGNCVSLLVLSSALPVFSRTLGITRFDLLGDFGRFNWLGNFYIVFIYNMGFAGLTTLCLVKRVTWAVQEELICAFGLHKLPLPVPRSRPQGGRC
SIO_010081: LMBR1L
subclass of: SO_0000673
so part of: LMBR1L
location: complement(join(757733..757791,757878..758039,758143..758209,758288..758378,758478..758551,758665..758742,758813..758889,758965..759048,759127..759202,759320..759384,759480..759548,759642..759768,759849..759952,760043..760182,760296..760332,760578..760662,762216..762287))
location: region:757733-762287:-1
so has part: feature:762216-762287:-1:exon
so has part: feature:760578-760662:-1:exon
so has part: feature:760296-760332:-1:exon
so has part: feature:760043-760182:-1:exon
so has part: feature:759849-759952:-1:exon
so has part: feature:759642-759768:-1:exon
so has part: feature:759480-759548:-1:exon
so has part: feature:759320-759384:-1:exon
so has part: feature:759127-759202:-1:exon
so has part: feature:758965-759048:-1:exon
so has part: feature:758813-758889:-1:exon
so has part: feature:758665-758742:-1:exon
so has part: feature:758478-758551:-1:exon
so has part: feature:758288-758378:-1:exon
so has part: feature:758143-758209:-1:exon
so has part: feature:757878-758039:-1:exon
so has part: feature:757733-757791:-1:exon

XP_015742401.1
type: Protein
SIO_000068: ncbiprotein

position:757733:-1
position: 757733
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:762287:-1
position: 762287
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:762216-762287:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:760578-760662:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:760296-760332:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:760043-760182:-1:exon

urn:…
SIO_000300: 5
SIO_000628: feature:759849-759952:-1:exon

urn:…
SIO_000300: 6
SIO_000628: feature:759642-759768:-1:exon

urn:…
SIO_000300: 7
SIO_000628: feature:759480-759548:-1:exon

urn:…
SIO_000300: 8
SIO_000628: feature:759320-759384:-1:exon

urn:…
SIO_000300: 9
SIO_000628: feature:759127-759202:-1:exon

urn:…
SIO_000300: 10
SIO_000628: feature:758965-759048:-1:exon

urn:…
SIO_000300: 11
SIO_000628: feature:758813-758889:-1:exon

urn:…
SIO_000300: 12
SIO_000628: feature:758665-758742:-1:exon

urn:…
SIO_000300: 13
SIO_000628: feature:758478-758551:-1:exon

urn:…
SIO_000300: 14
SIO_000628: feature:758288-758378:-1:exon

urn:…
SIO_000300: 15
SIO_000628: feature:758143-758209:-1:exon

urn:…
SIO_000300: 16
SIO_000628: feature:757878-758039:-1:exon

urn:…
SIO_000300: 17
SIO_000628: feature:757733-757791:-1:exon

LOC107325742
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(764872..785403)
location: region:764872-785403:-1
so has part: feature:764872-785403:-1:exon
subclass of: SO_0000010

107325742
type: Gene
SIO_000068: ncbigene

position:764872:-1
position: 764872
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785403:-1
position: 785403
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764872-785403:-1:exon

LOC107325742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325742
product: tubulin alpha-1A chain, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 mRNAs, 164 ESTs, 518 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 103 samples with support for all annotated introns
transcript id: XM_015886888.1
SIO_010081: LOC107325742
subclass of: SO_0000673
so part of: LOC107325742
location: complement(join(764872..765039,781735..782727,783735..783883,783966..784188,785284..785403))
location: region:764872-785403:-1
so has part: feature:785284-785403:-1:exon
so has part: feature:783966-784188:-1:exon
so has part: feature:783735-783883:-1:exon
so has part: feature:781735-782727:-1:exon
so has part: feature:764872-765039:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:785284-785403:-1:exon

position:785284:-1
position: 785284
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:783966-784188:-1:exon

position:783966:-1
position: 783966
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:784188:-1
position: 784188
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:783735-783883:-1:exon

position:783735:-1
position: 783735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:783883:-1
position: 783883
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:781735-782727:-1:exon

position:781735:-1
position: 781735
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:782727:-1
position: 782727
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:764872-765039:-1:exon

position:765039:-1
position: 765039
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325741
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325741
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(764872..777003)
location: region:764872-777003:-1
so has part: feature:764872-777003:-1:exon

107325741
type: Gene
SIO_000068: ncbigene

position:777003:-1
position: 777003
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:764872-777003:-1:exon

LOC107325741
type: Miscellaneous RNA
subclass of: SO_0000673
RO_0002162: 93934
gene: LOC107325741
product: tubulin alpha-1B chain-like
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 184 ESTs, 475 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
pseudo: true
transcript id: XR_001559756.1
SIO_010081: LOC107325741
so part of: LOC107325741
location: complement(join(764872..766038,766658..766806,766889..767111,776873..777003))
location: region:764872-777003:-1
so has part: feature:776873-777003:-1:exon
so has part: feature:766889-767111:-1:exon
so has part: feature:766658-766806:-1:exon
so has part: feature:764872-766038:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:776873-777003:-1:exon

position:776873:-1
position: 776873
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:766889-767111:-1:exon

position:766889:-1
position: 766889
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:767111:-1
position: 767111
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:766658-766806:-1:exon

position:766658:-1
position: 766658
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:766806:-1
position: 766806
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:764872-766038:-1:exon

position:766038:-1
position: 766038
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

LOC107325734
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325734
note: Derived by automated computational analysis using gene prediction method: Gnomon.
pseudo: true
so part of: sequence
location: complement(770901..772927)
location: region:770901-772927:-1
so has part: feature:770901-772927:-1:exon

107325734
type: Gene
SIO_000068: ncbigene

position:770901:-1
position: 770901
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772927:-1
position: 772927
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770901-772927:-1:exon

LOC107325734
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107325734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107325734
subclass of: SO_0000673
so part of: LOC107325734
location: complement(770901..771921)
location: region:770901-771921:-1
so has part: feature:770901-771921:-1:exon

position:771921:-1
position: 771921
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:770901-771921:-1:exon

LOC107325734
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107325734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107325734
subclass of: SO_0000673
so part of: LOC107325734
location: complement(772555..772721)
location: region:772555-772721:-1
so has part: feature:772555-772721:-1:exon

position:772555:-1
position: 772555
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:772721:-1
position: 772721
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772555-772721:-1:exon

LOC107325734
type: Exon
subclass of: SO_0000147
RO_0002162: 93934
gene: LOC107325734
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 54 Proteins, and 20% coverage of the annotated genomic feature by RNAseq alignments
pseudo: true
SIO_010081: LOC107325734
subclass of: SO_0000673
so part of: LOC107325734
location: complement(772811..772927)
location: region:772811-772927:-1
so has part: feature:772811-772927:-1:exon

position:772811:-1
position: 772811
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:772811-772927:-1:exon

LOC107325742
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325742
product: tubulin alpha-1A chain, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 mRNAs, 277 ESTs, 519 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 172 samples with support for all annotated introns
transcript id: XM_015886887.1
SIO_010081: LOC107325742
subclass of: SO_0000673
so part of: LOC107325742
location: complement(join(781546..782727,783735..783883,783966..784188,785284..785403))
location: region:781546-785403:-1
so has part: feature:785284-785403:-1:exon
so has part: feature:783966-784188:-1:exon
so has part: feature:783735-783883:-1:exon
so has part: feature:781546-782727:-1:exon

position:781546:-1
position: 781546
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785284-785403:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783966-784188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783735-783883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781546-782727:-1:exon

LOC107325742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1A chain
translation: MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY
SIO_010081: LOC107325742
subclass of: SO_0000673
so part of: LOC107325742
location: complement(join(781747..782727,783735..783883,783966..784188,785284..785286))
location: region:781747-785286:-1
so has part: feature:785284-785286:-1:exon
so has part: feature:783966-784188:-1:exon
so has part: feature:783735-783883:-1:exon
so has part: feature:781747-782727:-1:exon

XP_015742373.1
type: Protein
SIO_000068: ncbiprotein

position:781747:-1
position: 781747
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:785286:-1
position: 785286
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:785284-785286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783966-784188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783735-783883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781747-782727:-1:exon

LOC107325742
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325742
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1A chain
translation: MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSVEGEGEEEGEEY
SIO_010081: LOC107325742
subclass of: SO_0000673
so part of: LOC107325742
location: complement(join(781747..782727,783735..783883,783966..784188,785284..785286))
location: region:781747-785286:-1
so has part: feature:785284-785286:-1:exon
so has part: feature:783966-784188:-1:exon
so has part: feature:783735-783883:-1:exon
so has part: feature:781747-782727:-1:exon

XP_015742374.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:785284-785286:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:783966-784188:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:783735-783883:-1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:781747-782727:-1:exon

LOC107325743
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 789186..793593
location: region:789186-793593:1
so has part: feature:789186-793593:1:exon
subclass of: SO_0000010

107325743
type: Gene
SIO_000068: ncbigene

position:789186:1
position: 789186
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793593:1
position: 793593
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789186-793593:1:exon

LOC107325743
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325743
product: tubulin alpha-1C chain
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 219 ESTs, 512 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 141 samples with support for all annotated introns
transcript id: XM_015886889.2
SIO_010081: LOC107325743
subclass of: SO_0000673
so part of: LOC107325743
location: join(789186..789327,790567..790789,790872..791020,792552..793593)
location: region:789186-793593:1
so has part: feature:789186-789327:1:exon
so has part: feature:790567-790789:1:exon
so has part: feature:790872-791020:1:exon
so has part: feature:792552-793593:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:789186-789327:1:exon

position:789327:1
position: 789327
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:790567-790789:1:exon

position:790567:1
position: 790567
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:790789:1
position: 790789
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:790872-791020:1:exon

position:790872:1
position: 790872
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:791020:1
position: 791020
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:792552-793593:1:exon

position:792552:1
position: 792552
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325743
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325743
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: tubulin alpha-1C chain
translation: MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQMITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNSCFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSVDGEEDGEEY
SIO_010081: LOC107325743
subclass of: SO_0000673
so part of: LOC107325743
location: join(789325..789327,790567..790789,790872..791020,792552..793526)
location: region:789325-793526:1
so has part: feature:789325-789327:1:exon
so has part: feature:790567-790789:1:exon
so has part: feature:790872-791020:1:exon
so has part: feature:792552-793526:1:exon

XP_015742375.1
type: Protein
SIO_000068: ncbiprotein

position:789325:1
position: 789325
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:793526:1
position: 793526
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:789325-789327:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:790567-790789:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:790872-791020:1:exon

urn:…
SIO_000300: 4
SIO_000628: feature:792552-793526:1:exon

LOC107325758
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: LOC107325758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 794097..797906
location: region:794097-797906:1
so has part: feature:794097-797906:1:exon
subclass of: SO_0000010

107325758
type: Gene
SIO_000068: ncbigene

position:794097:1
position: 794097
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:797906:1
position: 797906
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794097-797906:1:exon

LOC107325758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325758
product: transmembrane protein 198-like, transcript variant X1
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 26 samples with support for all annotated introns
transcript id: XM_015886912.2
SIO_010081: LOC107325758
subclass of: SO_0000673
so part of: LOC107325758
location: join(794097..794326,795005..795548,796522..797906)
location: region:794097-797906:1
so has part: feature:794097-794326:1:exon
so has part: feature:795005-795548:1:exon
so has part: feature:796522-797906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794097-794326:1:exon

position:794326:1
position: 794326
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:795005-795548:1:exon

position:795005:1
position: 795005
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:795548:1
position: 795548
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:796522-797906:1:exon

position:796522:1
position: 796522
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325758
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: LOC107325758
product: transmembrane protein 198-like, transcript variant X2
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 EST, 4 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 15 samples with support for all annotated introns
transcript id: XM_032441058.1
SIO_010081: LOC107325758
subclass of: SO_0000673
so part of: LOC107325758
location: join(794097..794326,795005..795548,796522..796620,796687..797906)
location: region:794097-797906:1
so has part: feature:794097-794326:1:exon
so has part: feature:795005-795548:1:exon
so has part: feature:796522-796620:1:exon
so has part: feature:796687-797906:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:794097-794326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795005-795548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796522-796620:1:exon

position:796620:1
position: 796620
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:796687-797906:1:exon

position:796687:1
position: 796687
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

LOC107325758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 198-like
translation: MEPGAPTELRCRLEPWPHYEIGPATLCALGCVLGLLYGCVGHRCFKAVMFTSGLLLGSGTIFLLCYKERVLETRLSLELSAGIALAIGALCGLVTALLRSVGLFSTGLLLGLLLAVAVLAAAAPLVSPLSPWVLVGVLLGPALLCALLALCWPKALTTLSTAVLGAAVVVVGVDYFVEVFALVLHVSERLRMEAGGQLCWYSWVVLGVWPALSLLGVLLQQCRKPNGSRTEPPPSAATATSLPQ
SIO_010081: LOC107325758
subclass of: SO_0000673
so part of: LOC107325758
location: join(794206..794326,795005..795548,796522..796591)
location: region:794206-796591:1
so has part: feature:794206-794326:1:exon
so has part: feature:795005-795548:1:exon
so has part: feature:796522-796591:1:exon

XP_015742398.2
type: Protein
SIO_000068: ncbiprotein

position:794206:1
position: 794206
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:796591:1
position: 796591
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:794206-794326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795005-795548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796522-796591:1:exon

LOC107325758
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: LOC107325758
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: transmembrane protein 198-like
translation: MEPGAPTELRCRLEPWPHYEIGPATLCALGCVLGLLYGCVGHRCFKAVMFTSGLLLGSGTIFLLCYKERVLETRLSLELSAGIALAIGALCGLVTALLRSVGLFSTGLLLGLLLAVAVLAAAAPLVSPLSPWVLVGVLLGPALLCALLALCWPKALTTLSTAVLGAAVVVVGVDYFVEVFALVLHVSERLRMEAGGQLCWYSWVVLGVWPALSLLGVLLQQCRKPNGSRTEPPPSAATATSLPQ
SIO_010081: LOC107325758
subclass of: SO_0000673
so part of: LOC107325758
location: join(794206..794326,795005..795548,796522..796591)
location: region:794206-796591:1
so has part: feature:794206-794326:1:exon
so has part: feature:795005-795548:1:exon
so has part: feature:796522-796591:1:exon

XP_032296949.1
type: Protein
SIO_000068: ncbiprotein

urn:…
SIO_000300: 1
SIO_000628: feature:794206-794326:1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:795005-795548:1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:796522-796591:1:exon

PYM1
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: PYM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: complement(797693..800963)
location: region:797693-800963:-1
so has part: feature:797693-800963:-1:exon
subclass of: SO_0000010

107325759
type: Gene
SIO_000068: ncbigene

position:797693:-1
position: 797693
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800963:-1
position: 800963
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:797693-800963:-1:exon

PYM1
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: PYM1
product: PYM homolog 1, exon junction complex associated factor
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 165 samples with support for all annotated introns
transcript id: XM_015886913.2
SIO_010081: PYM1
subclass of: SO_0000673
so part of: PYM1
location: complement(join(797693..798566,798992..799085,800586..800963))
location: region:797693-800963:-1
so has part: feature:800586-800963:-1:exon
so has part: feature:798992-799085:-1:exon
so has part: feature:797693-798566:-1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:800586-800963:-1:exon

position:800586:-1
position: 800586
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:798992-799085:-1:exon

position:798992:-1
position: 798992
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:799085:-1
position: 799085
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:797693-798566:-1:exon

position:798566:-1
position: 798566
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

PYM1
type: Coding Sequence
subclass of: SO_0000316
RO_0002162: 93934
gene: PYM1
note: Derived by automated computational analysis using gene prediction method: Gnomon.
codon start: 1
product: partner of Y14 and mago
translation: MATPYVTDETGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKPELPPGLSLEANTQPSKQPSKAEGGETGLSKTAKRNLKRKEKRKQQQEKGEKETDGLIQSLEKVSLSGGSSGDTGGAAPQPTCGTQSNADGEAAASEKSKKIKNLKKKLRQVEELQQRLDSGEIKQPTKEQLEKLGRRKALEEELHELELDL
SIO_010081: PYM1
subclass of: SO_0000673
so part of: PYM1
location: complement(join(798071..798566,798992..799085,800586..800616))
location: region:798071-800616:-1
so has part: feature:800586-800616:-1:exon
so has part: feature:798992-799085:-1:exon
so has part: feature:798071-798566:-1:exon

XP_015742399.1
type: Protein
SIO_000068: ncbiprotein

position:798071:-1
position: 798071
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

position:800616:-1
position: 800616
reference: sequence
type: ReverseStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:800586-800616:-1:exon

urn:…
SIO_000300: 2
SIO_000628: feature:798992-799085:-1:exon

urn:…
SIO_000300: 3
SIO_000628: feature:798071-798566:-1:exon

DGKA
type: Gene
subclass of: SO_0000704
RO_0002162: 93934
gene: DGKA
note: Derived by automated computational analysis using gene prediction method: Gnomon.
so part of: sequence
location: 801183..807868
location: region:801183-807868:1
so has part: feature:801183-807868:1:exon
subclass of: SO_0000010

107325737
type: Gene
SIO_000068: ncbigene

position:801183:1
position: 801183
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807868:1
position: 807868
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 1
SIO_000628: feature:801183-807868:1:exon

DGKA
type: Messenger RNA
subclass of: SO_0000234
RO_0002162: 93934
gene: DGKA
product: diacylglycerol kinase alpha
note: Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 20 Proteins, and 97% coverage of the annotated genomic feature by RNAseq alignments, including 99 samples with support for all annotated introns
transcript id: XM_015886882.2
SIO_010081: DGKA
subclass of: SO_0000673
so part of: DGKA
location: join(801183..801307,802512..802589,802808..802884,802968..803088,803174..803254,803351..803400,803484..803558,803630..803749,803824..803941,804555..804643,804919..805038,805185..805283,805377..805630,805752..805826,805924..806009,806119..806208,806304..806464,806550..806614,806702..806792,806864..807053,807141..807261,807351..807411,807526..807868)
location: region:801183-807868:1
so has part: feature:801183-801307:1:exon
so has part: feature:802512-802589:1:exon
so has part: feature:802808-802884:1:exon
so has part: feature:802968-803088:1:exon
so has part: feature:803174-803254:1:exon
so has part: feature:803351-803400:1:exon
so has part: feature:803484-803558:1:exon
so has part: feature:803630-803749:1:exon
so has part: feature:803824-803941:1:exon
so has part: feature:804555-804643:1:exon
so has part: feature:804919-805038:1:exon
so has part: feature:805185-805283:1:exon
so has part: feature:805377-805630:1:exon
so has part: feature:805752-805826:1:exon
so has part: feature:805924-806009:1:exon
so has part: feature:806119-806208:1:exon
so has part: feature:806304-806464:1:exon
so has part: feature:806550-806614:1:exon
so has part: feature:806702-806792:1:exon
so has part: feature:806864-807053:1:exon
so has part: feature:807141-807261:1:exon
so has part: feature:807351-807411:1:exon
so has part: feature:807526-807868:1:exon

urn:…
SIO_000300: 1
SIO_000628: feature:801183-801307:1:exon

position:801307:1
position: 801307
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 2
SIO_000628: feature:802512-802589:1:exon

position:802512:1
position: 802512
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802589:1
position: 802589
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 3
SIO_000628: feature:802808-802884:1:exon

position:802808:1
position: 802808
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:802884:1
position: 802884
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 4
SIO_000628: feature:802968-803088:1:exon

position:802968:1
position: 802968
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803088:1
position: 803088
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 5
SIO_000628: feature:803174-803254:1:exon

position:803174:1
position: 803174
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803254:1
position: 803254
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 6
SIO_000628: feature:803351-803400:1:exon

position:803351:1
position: 803351
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803400:1
position: 803400
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 7
SIO_000628: feature:803484-803558:1:exon

position:803484:1
position: 803484
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803558:1
position: 803558
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 8
SIO_000628: feature:803630-803749:1:exon

position:803630:1
position: 803630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803749:1
position: 803749
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 9
SIO_000628: feature:803824-803941:1:exon

position:803824:1
position: 803824
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:803941:1
position: 803941
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 10
SIO_000628: feature:804555-804643:1:exon

position:804555:1
position: 804555
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:804643:1
position: 804643
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 11
SIO_000628: feature:804919-805038:1:exon

position:804919:1
position: 804919
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805038:1
position: 805038
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 12
SIO_000628: feature:805185-805283:1:exon

position:805185:1
position: 805185
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805283:1
position: 805283
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 13
SIO_000628: feature:805377-805630:1:exon

position:805377:1
position: 805377
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805630:1
position: 805630
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 14
SIO_000628: feature:805752-805826:1:exon

position:805752:1
position: 805752
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:805826:1
position: 805826
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 15
SIO_000628: feature:805924-806009:1:exon

position:805924:1
position: 805924
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806009:1
position: 806009
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 16
SIO_000628: feature:806119-806208:1:exon

position:806119:1
position: 806119
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806208:1
position: 806208
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 17
SIO_000628: feature:806304-806464:1:exon

position:806304:1
position: 806304
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806464:1
position: 806464
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 18
SIO_000628: feature:806550-806614:1:exon

position:806550:1
position: 806550
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806614:1
position: 806614
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 19
SIO_000628: feature:806702-806792:1:exon

position:806702:1
position: 806702
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:806792:1
position: 806792
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 20
SIO_000628: feature:806864-807053:1:exon

position:806864:1
position: 806864
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807053:1
position: 807053
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 21
SIO_000628: feature:807141-807261:1:exon

position:807141:1
position: 807141
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

position:807261:1
position: 807261
reference: sequence
type: ForwardStrandPosition
type: ExactPosition

urn:…
SIO_000300: 22
SIO_000628: feature:807351-807411:1:exon